BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008889
(550 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/536 (61%), Positives = 391/536 (72%), Gaps = 40/536 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQILK VPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 193 SVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 252
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWA+LVAR+CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEE+ELGF +WDPR+NPR
Sbjct: 253 NWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPR 312
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVM +QF +GN+IC+EIELNKAQWSALF+PY+F
Sbjct: 313 DRFHTMPIITPAYPCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNKAQWSALFQPYIF 372
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A+D DDLL W+GWVESR R LTLKIERDTNG+LQCHPYP+EY+D SK
Sbjct: 373 FEAYKNYLQVDIIASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSK 432
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
PC +SAFFMGL+RKEGV G+E QQFDIRGTVD FR+EI MYM+WKPGMDI+VSHVRR+QL
Sbjct: 433 PCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQL 492
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS--SGRHLKREKEHEMEEVRPDKSV 359
P+FVFPDGYKR R RH + QA +D C SG S R +KR+ EM + +PDK
Sbjct: 493 PAFVFPDGYKRTRMPRHISHQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPD 552
Query: 360 KRASISSEVPQPVSP------------------------GKTTGDSTNDSEVMSAGGHLV 395
KRASIS + + VSP G TT D+ ++ ++ S+
Sbjct: 553 KRASISPQRLECVSPESCTGKSGGTAQMSIECIKGVRLAGSTTKDANSNCKIKSSDALPG 612
Query: 396 SEKDTMAAHMQLD--GIVNHESVALNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRC 453
S T A MQ+ G VN L + + ++ V+N + ++ DLA
Sbjct: 613 SGLRTEVADMQISEAGFVNTTHDMLKSRSVEVPNENEVVNGD-KAQDLALDC-------- 663
Query: 454 EIHSVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGREYESKSCTQNLSCE 509
+ S +T S+ SL N + I +DQ L K CN +T E + +Y + +QNL+CE
Sbjct: 664 -LESAETESTNSLSNYEEGDIDMDQRLDKACNFITRAECS--DYVPNASSQNLNCE 716
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/571 (60%), Positives = 403/571 (70%), Gaps = 54/571 (9%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEQTVRSLNGCRVADQILK VPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 196 SVLYDVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWDPR+NPR
Sbjct: 256 NWALLVARLCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPR 315
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYPCMNSSYNVS+STLRVM EQFQ+GN+ICEEIELNKAQWSALFEPYLF
Sbjct: 316 DRFHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLF 375
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ+DI+AADADDLL WKGWVESR RQLTLKIERDT G+LQCHPYPNEYID SK
Sbjct: 376 FEAYKNYLQIDIIAADADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSK 435
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
CP+ AFFMGL+R++GV+G+E QQFDIRGTV+ FR+EI MYMFWKPGMD+YVSH RRRQL
Sbjct: 436 QCPHCAFFMGLQRRKGVSGQEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQL 495
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKR 361
P+FVFPDGYKR R SRH N+QAGKP + ++GS HLKR+ +HE+ +VRPDK KR
Sbjct: 496 PAFVFPDGYKRSRTSRHPNQQAGKPSDVSATSRAGSVEGHLKRKNDHEVVDVRPDKPEKR 555
Query: 362 ASISSEVPQPVSP----------------------GKTTGDSTNDSEVMSAGGHLVSEKD 399
AS+S + Q VSP T D ++SE GH + K
Sbjct: 556 ASVSPQRLQSVSPESNTISSGRTSLVSFCEGVPLESSTVADVDSNSEGKLDRGHSDNGKV 615
Query: 400 TMAAHMQLDGIVNHESVALNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEIHSVD 459
T +Q+ +NH+ ++ Q +DD+ + ++ E ++ C+I + D
Sbjct: 616 TFRGVVQVTETINHDP-RISAQTSMDLDDIPIYLSKVEEAE------------CKIMNPD 662
Query: 460 TVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGREYESKSCTQNLSCEGDDCVASLDT 519
QEL+ P + + + +L GD A D+
Sbjct: 663 P----------------KQELLDPYATSNSINGEAPKTMGEDRIGDL---GDILAADSDS 703
Query: 520 LSENGCLNSCEVFHNSLTEELEPSSTLGATV 550
L E CL+ + + L E LEP++ + V
Sbjct: 704 LLETDCLDVSRLSQSGLLENLEPNTEMVKVV 734
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 331/571 (57%), Positives = 387/571 (67%), Gaps = 40/571 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL NVDEQTVRSLNGCRVADQIL+ VPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 188 SVLYNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 247
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVA+VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEE+ELGF VWDPR+NPR
Sbjct: 248 NWALLVAQVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPR 307
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVM EQF++GN ICEEI+L+KAQWSALFEPYLF
Sbjct: 308 DRFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLF 367
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE YKNYLQVDI+AADADDLL WKGWVESRFRQLTLKIERDT G+LQCHPYP EY D SK
Sbjct: 368 FETYKNYLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSK 427
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
PC + AFFMGL+RKEG+ G+ QQFDIRGTVD FR+EI MY FWKPGMDIYVSHVRR+QL
Sbjct: 428 PCSHCAFFMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQL 487
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEH------------- 348
P+FVFPDG+KR +P RH +Q C D+ QSG + + KR+ +H
Sbjct: 488 PTFVFPDGHKRAKPLRHEGQQVDTVCADMLQDQSGITEKGKKRKSDHEEEEKEKKQALIS 547
Query: 349 ---------EMEEVRPDK---SVKRAS------ISSEVPQPVSPGKTTGDSTNDSEVMSA 390
E PD S K A+ + S QPVS T G+ T+ + +
Sbjct: 548 PPAEQSPMPEFFGGDPDGKWPSSKFANADCHLKVWSSFEQPVSRTDTNGNGTDIATLTKE 607
Query: 391 GGHLVSEKDTMAAHMQLDGIVNHESVALNEQKCTLVDDLSVINNESESSDLAEPSKPGLL 450
G + A ++ + E L + + + I + E+ D P+ G
Sbjct: 608 TGSTGDQLGLPAKEIE-ESSSRKEVPDLYKGSISTSKEALQIGTDRENVDGLAPNMNG-- 664
Query: 451 GRCEIHSVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGREYESKSCTQNLSCEG 510
SV TVS +LL+ +++D E +MT E E++ T NLSC+G
Sbjct: 665 ------SVQTVSIRTLLHWTKDVVRIDSESGNTYGEMTGGESTQVEFQPNCNTHNLSCKG 718
Query: 511 DDCVASLDTLSENGCLNSCEVFHNSLTEELE 541
+D D +NG + + V N ++ LE
Sbjct: 719 NDSRTDPDLALDNGSVVTGRVSQNGQSKVLE 749
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 307/459 (66%), Positives = 351/459 (76%), Gaps = 30/459 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQILK VPNVEHFR LRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 192 SVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWA+LVAR+CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEE+ELGF +WDPR+NPR
Sbjct: 252 NWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPR 311
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVM EQF++GN+IC+EIELNKAQWSALF+PY+F
Sbjct: 312 DRFHTMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYIF 371
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A+DADDLL W+GWVESR R LTLKIERDTNG+LQCHPYPNEY+D SK
Sbjct: 372 FEAYKNYLQVDIIASDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSK 431
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C +SAFFMGL+RKEGV G+E QQFDIRGTVD FR+EI MYM+WKPGMDI+VSHVRR+QL
Sbjct: 432 LCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQL 491
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSG----RHLKREKEHEMEEVRPDK 357
P+FVFP GYKR R RH + QA K +D C SGS R +KR+ EM + +P K
Sbjct: 492 PAFVFPGGYKRTRMPRHISHQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVDKKPGK 551
Query: 358 SVKRASISSEVPQPVSP------------------------GKTTGDSTNDSEVMSAGGH 393
KRASIS + + VSP G TT D+ ++ EV S+
Sbjct: 552 PDKRASISPQRLECVSPESCTSKSGGTTQMSIECIEVVRLAGSTTKDANDNCEVKSSDAL 611
Query: 394 LVSEKDTMAAHMQLD--GIVNHESVALNEQKCTLVDDLS 430
S T A MQ+ G V+ L + + +++S
Sbjct: 612 PGSGLSTEVADMQISEPGFVDTTHDMLKSRSVEIPNEVS 650
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/374 (76%), Positives = 319/374 (85%), Gaps = 5/374 (1%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL N+DE TVRSLNGCRVADQILK VPNVEHF TLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 187 LSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 246
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWALLVARVCQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEEDELGFSVWDPRKNP
Sbjct: 247 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNP 306
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDR+HHMPIITPAYPCMNSSYNVS+STLRVM EQFQ+GN+ICE IEL+ AQW ALFEPYL
Sbjct: 307 RDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYL 366
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFE+YKNYLQVDIVA D DDL WKGWVESR RQLTL IERDT G LQCHPYP+EY+D S
Sbjct: 367 FFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS 426
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
K C + AFFMGL+RK+G +E QQFDIRGTVD FR I MYMFWKPGM+IYVSHVRR+Q
Sbjct: 427 KQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQ 486
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVK 360
+PS+VFP+GYKR RP R N+Q G + C++GSS +H+KR+K+ E +V DK+ K
Sbjct: 487 IPSYVFPEGYKRSRPQRPVNQQQGD-----EACRTGSSEKHMKRKKDPEEVDVEQDKAAK 541
Query: 361 RASISSEVPQPVSP 374
R +IS + VSP
Sbjct: 542 RLTISPQRQDSVSP 555
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 509 EGDDCVASLDTLSENGCLNSCEVFHNSLTEELEPSSTLGATV 550
+GD C A + L ENGC+N+ E F + L EELEP++ LG +
Sbjct: 690 QGDSCEADSELLLENGCVNAKEGFQDGLHEELEPNAALGIVL 731
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 336/563 (59%), Positives = 391/563 (69%), Gaps = 38/563 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 369 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 429 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 488
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 489 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 548
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 549 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 608
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 609 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 654
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG-------DDCVASLDTLSENGCL 526
D+ L V ++G + S+SC QN EG D + + S++G
Sbjct: 655 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEGFGFPAANSDPMGKKNLYSQSGM- 706
Query: 527 NSCEVFHNSLTEELEPSSTLGAT 549
S ++ NSL +E S +T
Sbjct: 707 -SEDLQSNSLVSGMEKSEDRAST 728
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/374 (76%), Positives = 319/374 (85%), Gaps = 5/374 (1%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL N+DE TVRSLNGCRVADQILK VPNVEHF TLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 178 LSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 237
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWALLVARVCQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEEDELGFSVWDPRKNP
Sbjct: 238 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNP 297
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDR+HHMPIITPAYPCMNSSYNVS+STLRVM EQFQ+GN+ICE IEL+ AQW ALFEPYL
Sbjct: 298 RDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYL 357
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFE+YKNYLQVDIVA D DDL WKGWVESR RQLTL IERDT G LQCHPYP+EY+D S
Sbjct: 358 FFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS 417
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
K C + AFFMGL+RK+G +E QQFDIRGTVD FR I MYMFWKPGM+IYVSHVRR+Q
Sbjct: 418 KQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQ 477
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVK 360
+PS+VFP+GYKR RP R N+Q G + C++GSS +H+KR+K+ E +V DK+ K
Sbjct: 478 IPSYVFPEGYKRSRPQRPVNQQQGD-----EACRTGSSEKHMKRKKDPEEVDVEQDKAAK 532
Query: 361 RASISSEVPQPVSP 374
R +IS + VSP
Sbjct: 533 RLTISPQRQDSVSP 546
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 336/563 (59%), Positives = 391/563 (69%), Gaps = 38/563 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 609
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 610 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 655
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG-------DDCVASLDTLSENGCL 526
D+ L V ++G + S+SC QN EG D + + S++G
Sbjct: 656 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEGFGFPAANSDPMGKKNLYSQSGM- 707
Query: 527 NSCEVFHNSLTEELEPSSTLGAT 549
S ++ NSL +E S +T
Sbjct: 708 -SEDLQSNSLVSGMEKSEDRAST 729
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 373/517 (72%), Gaps = 29/517 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 609
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 610 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 655
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG 510
D+ L V ++G + S+SC QN EG
Sbjct: 656 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEG 685
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 373/517 (72%), Gaps = 29/517 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 609
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 610 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 655
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG 510
D+ L V ++G + S+SC QN EG
Sbjct: 656 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEG 685
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 373/517 (72%), Gaps = 29/517 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 609
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 610 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 655
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG 510
D+ L V ++G + S+SC QN EG
Sbjct: 656 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEG 685
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 373/517 (72%), Gaps = 29/517 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 609
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 610 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 655
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG 510
D+ L V ++G + S+SC QN EG
Sbjct: 656 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEG 685
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 373/517 (72%), Gaps = 29/517 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 369 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 429 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 488
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 489 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 548
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 549 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 608
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 609 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 654
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG 510
D+ L V ++G + S+SC QN EG
Sbjct: 655 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEG 684
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 373/517 (72%), Gaps = 29/517 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 609
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 610 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 655
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG 510
D+ L V ++G + S+SC QN EG
Sbjct: 656 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEG 685
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 373/517 (72%), Gaps = 29/517 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 609
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 610 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 655
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG 510
D+ L V ++G + S+SC QN EG
Sbjct: 656 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEG 685
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 373/517 (72%), Gaps = 29/517 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWD RKN R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 430 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 489
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N GK ED + SGS RH KR+ + EM +VRP+K K
Sbjct: 490 PPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEK 549
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + + +L + +E +
Sbjct: 550 RASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTELTDLARNECNS 609
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKV 476
+EQ VD ++V+ E SD AEP LG+C SVD V+ V G +
Sbjct: 610 GSEQVLE-VDSMAVVQ---ECSDPAEP-----LGKCVTPDSVDVVAC-----VSGQEENL 655
Query: 477 DQELVKPCNQMTVVEVAGRE---YESKSCTQNLSCEG 510
D+ L V ++G + S+SC QN EG
Sbjct: 656 DRNLRS-------VSISGTDSPLLPSRSCGQNRDYEG 685
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 307/456 (67%), Positives = 350/456 (76%), Gaps = 13/456 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLCDVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEEDELGF VWDPRKN R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN I +EIELNK WS+LFE Y+F
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVA DA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D ++
Sbjct: 369 FEAYKNYLQVDIVAGDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EGV G+E QQFDIRGTVD FR+E+ MYMFWKPGMD++VSHVRRRQL
Sbjct: 429 QFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQL 488
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKSVK 360
P FVFP+GY+RPR SRH N+ GK ED + SGS RH KR+ + EM + RP+K K
Sbjct: 489 PPFVFPNGYRRPRQSRHQNQPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEK 548
Query: 361 RASISSEVPQPVSP---GKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
RAS+S + VSP TTG + + + ++ +L +E +
Sbjct: 549 RASLSPQSLDIVSPESSAITTGWTPPVCNLRRPPSEEIEAENLNTECTELTNFARNECNS 608
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRC 453
+EQ VD ++++ E SD AEP LG+C
Sbjct: 609 GSEQVLE-VDSMALVQ---ECSDPAEP-----LGKC 635
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 329/589 (55%), Positives = 397/589 (67%), Gaps = 52/589 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEQTVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQ YPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEED+L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN IC+EIELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVD++AADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D SK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R +G G+E QQFDIRGTVD FR+E+ MYMFW+PGMD++VSHVRRRQL
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKR 361
PSFVFP+GYKR R SRH ++Q +P ++ S S R+ KR+ + E+ RP+K KR
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKR 551
Query: 362 ASISS---EVPQPVSPGKTTGDSTN-------DSEVMSAGGHL----------VSEKDTM 401
AS S + P S G TT + +E + G + V + +
Sbjct: 552 ASCSLHTLDAASPDSSGITTSGTPQIGIVPGPRAECLVTGDLVCNVTSLPNVEVEAEKFI 611
Query: 402 AAHMQLDGIVNHESVALNEQKCTLVDDLSVINNESESSDLAEPS----KPGL-------- 449
+ +L +E + +EQ VD +++ + DLAEP +P L
Sbjct: 612 SKITELRKFSQYEHTSGSEQILE-VDSRALVQS---YHDLAEPVAKHVRPDLSALLACEG 667
Query: 450 ---------LGRCEIHSVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGREYESK 500
+G I+ DT LNV +V++E + E+AG +
Sbjct: 668 GQNKEIGHDMGSESINDTDTQHLPRRLNVNEDVDEVERE-------AKLGEIAGGVLWNG 720
Query: 501 SCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLTEELEPSSTLGAT 549
C +NL EG A+LD+ EN L+S +F + L EEL+ +S L T
Sbjct: 721 HCGRNLDHEGFVTPANLDSAVENRNLHSDGLFKSGLPEELQSNSLLSGT 769
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 329/589 (55%), Positives = 397/589 (67%), Gaps = 52/589 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEQTVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQ YPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEED+L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN IC+EIELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVD++AADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D SK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R +G G+E QQFDIRGTVD FR+E+ MYMFW+PGMD++VSHVRRRQL
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKR 361
PSFVFP+GYKR R SRH ++Q +P ++ S S R+ KR+ + E+ RP+K KR
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKR 551
Query: 362 ASISS---EVPQPVSPGKTTGDSTN-------DSEVMSAGGHL----------VSEKDTM 401
AS S + P S G TT + +E + G + V + +
Sbjct: 552 ASCSLHTLDAASPDSSGITTSGTPQIGIVPGPRAECLVTGDLVCNVTSLPNVEVEAEKFI 611
Query: 402 AAHMQLDGIVNHESVALNEQKCTLVDDLSVINNESESSDLAEPS----KPGL-------- 449
+ +L +E + +EQ VD +++ + DLAEP +P L
Sbjct: 612 SKITELRKFSQYEHTSGSEQILE-VDSRALVQS---YHDLAEPVAKHVRPDLSALLACEG 667
Query: 450 ---------LGRCEIHSVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGREYESK 500
+G I+ DT LNV +V++E + E+AG +
Sbjct: 668 GQNKEIGHDMGSESINDTDTQHLPRRLNVNEDVDEVERE-------AKLGEIAGGVLWNG 720
Query: 501 SCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLTEELEPSSTLGAT 549
C +NL EG A+LD+ EN L+S +F + L EEL+ +S L T
Sbjct: 721 HCGRNLDHEGFVTPANLDSAVENRNLHSDGLFKSGLPEELQSNSLLSGT 769
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 329/589 (55%), Positives = 397/589 (67%), Gaps = 52/589 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEQTVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQ YPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEED+L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN IC+EIELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVD++AADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D SK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R +G G+E QQFDIRGTVD FR+E+ MYMFW+PGMD++VSHVRRRQL
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKR 361
PSFVFP+GYKR R SRH ++Q +P ++ S S R+ KR+ + E+ RP+K KR
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKR 551
Query: 362 ASISS---EVPQPVSPGKTTGDSTN-------DSEVMSAGGHL----------VSEKDTM 401
AS S + P S G TT + +E + G + V + +
Sbjct: 552 ASCSLHTLDAASPDSSGITTSGTPQIGIVPGPRAECLVTGDLVCNVTSLPNVEVEAEKFI 611
Query: 402 AAHMQLDGIVNHESVALNEQKCTLVDDLSVINNESESSDLAEPS----KPGL-------- 449
+ +L +E + +EQ VD +++ + DLAEP +P L
Sbjct: 612 SKITELRKFSQYEHTSGSEQILE-VDSRALVQS---YHDLAEPVAKHVRPDLSALLACEG 667
Query: 450 ---------LGRCEIHSVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGREYESK 500
+G I+ DT LNV +V++E + E+AG +
Sbjct: 668 GQNKEIGHDMGSESINDTDTQHLPRRLNVNEDVDEVERE-------AKLGEIAGGVLWNG 720
Query: 501 SCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLTEELEPSSTLGAT 549
C +NL EG A+LD+ EN L+S +F + L EEL+ +S L T
Sbjct: 721 HCGRNLDHEGFVTPANLDSAVENRNLHSDGLFKSGLPEELQSNSLLSGT 769
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 329/589 (55%), Positives = 397/589 (67%), Gaps = 52/589 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEQTVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 192 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 251
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQ YPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEED+L F VWDPRKN R
Sbjct: 252 NWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHR 311
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN IC+EIELNK WS+LF+ Y+F
Sbjct: 312 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMF 371
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVD++AADA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D SK
Sbjct: 372 FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 431
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R +G G+E QQFDIRGTVD FR+E+ MYMFW+PGMD++VSHVRRRQL
Sbjct: 432 QFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQL 491
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKR 361
PSFVFP+GYKR R SRH ++Q +P ++ S S R+ KR+ + E+ RP+K KR
Sbjct: 492 PSFVFPNGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKR 551
Query: 362 ASISS---EVPQPVSPGKTTGDSTN-------DSEVMSAGGHL----------VSEKDTM 401
AS S + P S G TT + +E + G + V + +
Sbjct: 552 ASCSLHTLDAASPDSSGITTSGTPQIGIVPGPRAECLVTGDLVCNVTSLPNVEVEAEKFI 611
Query: 402 AAHMQLDGIVNHESVALNEQKCTLVDDLSVINNESESSDLAEPS----KPGL-------- 449
+ +L +E + +EQ VD +++ + DLAEP +P L
Sbjct: 612 SKITELRKFSQYEHTSGSEQILE-VDSRALVQS---YHDLAEPVAKHVRPDLSALLACEG 667
Query: 450 ---------LGRCEIHSVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGREYESK 500
+G I+ DT LNV +V++E + E+AG +
Sbjct: 668 GQNKEIGHDMGSESINDTDTQHLPRRLNVNEDVDEVERE-------AKLGEIAGGVLWNG 720
Query: 501 SCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLTEELEPSSTLGAT 549
C +NL EG A+LD+ EN L+S +F + L EEL+ +S L T
Sbjct: 721 HCGRNLDHEGFVTPANLDSAVENRNLHSDGLFKSGLPEELQSNSLLSGT 769
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 326/582 (56%), Positives = 393/582 (67%), Gaps = 40/582 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDEQTVRSLNGCRVADQILK VPN EHFR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 193 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 252
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNAIPSMLVSRFFRVY QWRWPNPVMLC IEEDEL F VWDPRKN R
Sbjct: 253 NWALLVARLCQLYPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHR 312
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTEQFQ+GN IC+EIELNK QWS+LFE Y+F
Sbjct: 313 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMF 372
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVD++A DA+DLL WKGWVESRFRQLTLKIERDTNG+L CHP PNEY+D SK
Sbjct: 373 FEAYKNYLQVDVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 432
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL+R EG G+E QQFDIRGTVD FR+E+ MYMFW+PGMD+YVSHVRRRQL
Sbjct: 433 KFRHCAFFMGLQRAEGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQL 492
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKR 361
PSFVFP GYKRPR SRH N+Q +P E V S S + KR+ ++E + RP+K KR
Sbjct: 493 PSFVFPKGYKRPRQSRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNETMDTRPEKREKR 552
Query: 362 ASISS---EVPQPVSPGKTTGDSTN-------DSEVMSAGGHLVSEKDTMAAHMQLDGIV 411
AS S + PVS G TTG++ +E + G + + + ++ + +
Sbjct: 553 ASRSPHSLDAVSPVSSGITTGETPQIGIAPGPRAECLVTGDLVCNVRSLPNVEVEAEKFI 612
Query: 412 NH--ESVALNE-------QKCTLVDDLSVINNESESSDLAEP------SKPGLLGRCEIH 456
E + ++ ++ VD +++ LAEP P + CE
Sbjct: 613 RKSTELIKFSQYEHNSGCEQILEVDSRALVQG---YHGLAEPVGKHVRPDPRAVLACEGW 669
Query: 457 SVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGREYESKS----------CTQNL 506
+ G + + + Q L + N V+ RE +S C +NL
Sbjct: 670 QNKEI--GRDMGSESINDTATQHLPRRLNVKEDVDEVEREAKSGEIADGVLWNGYCGRNL 727
Query: 507 SCEGDDCVASLDTLSENGCLNSCEVFHNSLTEELEPSSTLGA 548
EG A+LD+ E+ L++ +F + L+EEL+ + L
Sbjct: 728 DHEGFLTPANLDSAVEHRNLHADRLFKSGLSEELQSNPLLSG 769
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/432 (68%), Positives = 333/432 (77%), Gaps = 7/432 (1%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL +VDE TVRSLNGCRVADQILK VPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 149 VSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGG 208
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWALLVAR+CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS+WDPRKNP
Sbjct: 209 VNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNP 268
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDR+HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+ICEEIEL K QW+ LFEPYL
Sbjct: 269 RDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLFEPYL 328
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFE+YKNYLQVDIVA D DDL WKGWVESR RQLTL I+RDT G LQCHPYP+EY+D S
Sbjct: 329 FFESYKNYLQVDIVATDVDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTS 388
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
KPC + AFFMGL+RK+G +E QQFDIRGTVD FR I MYMFWKPGM+IYVSHVRR+Q
Sbjct: 389 KPCAHCAFFMGLQRKQGEMIQEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHVRRKQ 448
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKP--CEDVKMCQSGSSGRHLKREKEHEMEEVRPDKS 358
+PS+VFPDGY+R R R +Q C D +GSS R KR+K+ + +V+ D
Sbjct: 449 IPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDVKNDMP 508
Query: 359 VKRASISSEVPQPVSPG----KTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHE 414
KR SIS + VSP K G S+ S + G L +K T +DG+
Sbjct: 509 EKRNSISPQRRDSVSPDIFTHKFGGPSSECSAIAEGKGTLQLDKRTFCPD-DVDGVCTSN 567
Query: 415 SVALNEQKCTLV 426
S + +V
Sbjct: 568 SSGITSLSSEIV 579
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 278/335 (82%), Positives = 299/335 (89%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL NVDEQTVRSLNGCRVADQIL+ VPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 188 SVLYNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 247
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVA+VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEE+ELGF VWDPR+NPR
Sbjct: 248 NWALLVAQVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPR 307
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVM EQF++GN ICEEI+L+KAQWSALFEPYLF
Sbjct: 308 DRFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLF 367
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE YKNYLQVDI+AADADDLL WKGWVESRFRQLTLKIERDT G+LQCHPYP EY D SK
Sbjct: 368 FETYKNYLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSK 427
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
PC + AFFMGL+RKEG+ G+ QQFDIRGTVD FR+EI MY FWKPGMDIYVSHVRR+QL
Sbjct: 428 PCSHCAFFMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQL 487
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSG 336
P+FVFPDG+KR +P RH +Q C D+ QSG
Sbjct: 488 PTFVFPDGHKRAKPLRHEGQQVDTVCADMLQDQSG 522
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 277/367 (75%), Positives = 302/367 (82%), Gaps = 7/367 (1%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL N+DE TVRSLNGCRVADQILK VPNVEHF TLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 187 LSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 246
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWALLVARVCQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEEDELGFSVWDPRKNP
Sbjct: 247 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNP 306
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDR+HHMPIITPAYPCMNSSYNVS+STLRVM EQFQ+GN+ICE IEL+ AQW ALFEPYL
Sbjct: 307 RDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYL 366
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFE+YKNYLQVDIVA D DDL WKGWVESR RQLTL IERDT G LQCHPYP+EY+D S
Sbjct: 367 FFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS 426
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
K C + AFFMGL+RK+G +E QQFDIRGTVD FR I MYMFWKPGM+IYVSHVRR+Q
Sbjct: 427 KQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQ 486
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKRE-------KEHEMEEV 353
+PS+VFP+GYKR RP R N+Q G ++ S + E K E +
Sbjct: 487 IPSYVFPEGYKRSRPQRPVNQQQGDEASAKRLTISPQRQDSVSPEIISHRWMKADEKGNI 546
Query: 354 RPDKSVK 360
PDKS K
Sbjct: 547 EPDKSDK 553
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 509 EGDDCVASLDTLSENGCLNSCEVFHNSLTEELEPSSTLGATV 550
+GD C A + L ENGC+N+ E F + L EELEP++ LG +
Sbjct: 611 QGDSCEADSELLLENGCVNAKEGFQDGLHEELEPNAALGIVL 652
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 274/374 (73%), Positives = 310/374 (82%), Gaps = 4/374 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL ++DE TVRSL GCRVADQIL+ VPN+E FR TLRCLK WA+RRGVYSNVTGFLGGV
Sbjct: 171 AVLYDIDEATVRSLTGCRVADQILRLVPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGV 230
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQWRWP PVMLC IEE+ELGF VWDPRKNPR
Sbjct: 231 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPR 290
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+IC+EIE+NKA WSALFEP+ F
Sbjct: 291 DRTHHMPIITPAYPCMNSSYNVSTSTLRVMIEQFQFGNKICQEIEMNKASWSALFEPFNF 350
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G LQCHPYP EY DPS+
Sbjct: 351 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSR 410
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL RKEGV +E QQFDIRGTVD FR EI MYMFWKPGM++ VSHVRR+++
Sbjct: 411 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEI 470
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHE-MEEVRPDKSVK 360
P++VFP+GYKRPRP RH N Q D +GS LKR+ + +++ P +SVK
Sbjct: 471 PAYVFPEGYKRPRPQRHVNHQHQSDKNDPG---NGSPDSQLKRKHDSTGIDDTEPCQSVK 527
Query: 361 RASISSEVPQPVSP 374
RASIS P+ SP
Sbjct: 528 RASISPGHPKTSSP 541
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/552 (57%), Positives = 372/552 (67%), Gaps = 42/552 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQI++ VPN E+FR LRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEE+ELGF VWDPRKNPR
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GNRIC+EIE+NK W ALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL RKEGV +E QQFDIRGTVD FR EI MYMFWKPGM++ VSHVRR+Q+
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQV 479
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGK-PCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVK 360
P++VFP+GYKRPRPSRH N Q+ K ED +S S LKR +H+ + K
Sbjct: 480 PAYVFPEGYKRPRPSRHVNHQSDKNDTEDGTATRSPDS--QLKR--KHDSVGTDDIRYAK 535
Query: 361 RASISSEVPQPVSPGKTTGDST---NDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
R+S S P+ +TGD T N + + S A+ D I
Sbjct: 536 RSSTSPVHPKNSPQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTI------- 588
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEIHSVDTVSSGSLLNVKGVAIKVD 477
L+ +CT +V + ++ S + P L+ C +V ++ +K VA KV
Sbjct: 589 LSAPRCTTTG--AVCSGDAISKHSSVP----LVENCTTPTVAVCTT-----LKRVAEKVV 637
Query: 478 QELVKPCNQMTVVEVAGREYESKSCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLT 537
ELV S+ N S E + + D L+EN V L
Sbjct: 638 SELVG----------------SERLGSNNSAELLESMEKEDVLAENVRFGGNGVAQGGLP 681
Query: 538 EELEPSSTLGAT 549
EELEP++ + A
Sbjct: 682 EELEPNNRIEAV 693
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/393 (69%), Positives = 319/393 (81%), Gaps = 3/393 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPNVE+FR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEEDELGF VWDPRK R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSHHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+IC+EI+++KA WSALFEP+ F
Sbjct: 309 DRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+
Sbjct: 369 FEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL RKEG +E QQFDIRGTVD FR +IGMY +W+PGM++ VSHVRR+Q+
Sbjct: 429 QCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQI 488
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSS--GRHLKREKEHEMEEVRPDKSV 359
PS+VFP+GYKRPRPSRH N DV+ + S G+ ++ + + P +SV
Sbjct: 489 PSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSV 548
Query: 360 KRASISSEVPQPVSPGKTTGDSTNDSEVMSAGG 392
KRASIS + PV ++ S N ++ A G
Sbjct: 549 KRASISPSI-SPVHQKTSSPPSGNIADASGASG 580
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/386 (72%), Positives = 312/386 (80%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL NVDE TVRSLNGCRVADQILK VPNVE FR LRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 194 VSVLYNVDEPTVRSLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGG 253
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWALLVARVCQLYPNA+PSML+SRFFRVYT WRWPNPVMLC IEED+LG SVWDPRKNP
Sbjct: 254 VNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNP 313
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDR+HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN++CEEIELNKAQWS+LFEPYL
Sbjct: 314 RDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYL 373
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFE+YKNYLQVDIVAADADDL +WKGWVESRFR LTL IER T G LQCHPYP+EY+D S
Sbjct: 374 FFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTS 433
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
KPC + AFFMGL+RK+G +E QQFDIR +VD F+ YMFWKPGM+I+VSHVRRRQ
Sbjct: 434 KPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQ 493
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVK 360
+P FVFP+G+KR R SR Q EDV+ +SGS R LKR+ + E + K
Sbjct: 494 IPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQK 553
Query: 361 RASISSEVPQPVSPGKTTGDSTNDSE 386
R SIS VS + +T SE
Sbjct: 554 RQSISPRRQDSVSSNISNFSNTASSE 579
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/393 (69%), Positives = 319/393 (81%), Gaps = 3/393 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPNVE+FR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEEDELGF VWDPRK R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSHHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+IC+EI+++KA WSALFEP+ F
Sbjct: 309 DRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+
Sbjct: 369 FEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL RKEG +E QQFDIRGTVD FR +IGMY +W+PGM++ VSHVRR+Q+
Sbjct: 429 QCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQI 488
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSS--GRHLKREKEHEMEEVRPDKSV 359
PS+VFP+GYKRPRPSRH N DV+ + S G+ ++ + + P +SV
Sbjct: 489 PSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSV 548
Query: 360 KRASISSEVPQPVSPGKTTGDSTNDSEVMSAGG 392
KRASIS + PV ++ S N ++ A G
Sbjct: 549 KRASISPSI-SPVHQKTSSPPSGNIADASGASG 580
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/393 (69%), Positives = 319/393 (81%), Gaps = 3/393 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPNVE+FR TLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEEDELGF VWDPRK R
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSHHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+IC+EI+++KA WSALFEP+ F
Sbjct: 309 DRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+
Sbjct: 369 FEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL RKEG +E QQFDIRGTVD FR +IGMY +W+PGM++ VSHVRR+Q+
Sbjct: 429 QCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQI 488
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSS--GRHLKREKEHEMEEVRPDKSV 359
PS+VFP+GYKRPRPSRH N DV+ + S G+ ++ + + P +SV
Sbjct: 489 PSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSV 548
Query: 360 KRASISSEVPQPVSPGKTTGDSTNDSEVMSAGG 392
KRASIS + PV ++ S N ++ A G
Sbjct: 549 KRASISPSI-SPVHQKTSSPPSGNIADASGASG 580
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/544 (57%), Positives = 367/544 (67%), Gaps = 42/544 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQI++ VPN E+FR LRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEE+ELGF VWDPRKNPR
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GNRIC+EIE+NK W ALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL RKEGV +E QQFDIRGTVD FR EI MYMFWKPGM++ VSHVRR+Q+
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQV 479
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGK-PCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVK 360
P++VFP+GYKRPRPSRH N Q+ K ED +S S LKR +H+ + K
Sbjct: 480 PAYVFPEGYKRPRPSRHVNHQSDKNDTEDGTATRSPDS--QLKR--KHDSVGTDDIRYAK 535
Query: 361 RASISSEVPQPVSPGKTTGDST---NDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
R+S S P+ +TGD T N + + S A+ D I
Sbjct: 536 RSSTSPVHPKNSPQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTI------- 588
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEIHSVDTVSSGSLLNVKGVAIKVD 477
L+ +CT +V + ++ S + P L+ C +V ++ +K VA KV
Sbjct: 589 LSAPRCTTTG--AVCSGDAISKHSSVP----LVENCTTPTVAVCTT-----LKRVAEKVV 637
Query: 478 QELVKPCNQMTVVEVAGREYESKSCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLT 537
ELV S+ N S E + + D L+EN V L
Sbjct: 638 SELVG----------------SERLGSNNSAELLESMEKEDVLAENVRFGGNGVAQGGLP 681
Query: 538 EELE 541
EELE
Sbjct: 682 EELE 685
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/544 (57%), Positives = 367/544 (67%), Gaps = 42/544 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQI++ VPN E+FR LRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEE+ELGF VWDPRKNPR
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GNRIC+EIE+NK W ALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL RKEGV +E QQFDIRGTVD FR EI MYMFWKPGM++ VSHVRR+Q+
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQV 479
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGK-PCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVK 360
P++VFP+GYKRPRPSRH N Q+ K ED +S S LKR +H+ + K
Sbjct: 480 PAYVFPEGYKRPRPSRHVNHQSDKNDTEDGTATRSPDS--QLKR--KHDSVGTDDIRYAK 535
Query: 361 RASISSEVPQPVSPGKTTGDST---NDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
R+S S P+ +TGD T N + + S A+ D I
Sbjct: 536 RSSTSPVHPKNSPQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTI------- 588
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEIHSVDTVSSGSLLNVKGVAIKVD 477
L+ +CT +V + ++ S + P L+ C +V ++ +K VA KV
Sbjct: 589 LSAPRCTTTG--AVCSGDAISKHSSVP----LVENCTTPTVAVCTT-----LKRVAEKVV 637
Query: 478 QELVKPCNQMTVVEVAGREYESKSCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLT 537
ELV S+ N S E + + D L+EN V L
Sbjct: 638 SELVG----------------SERLGSNNSAELLESMEKEDVLAENVRFGGNGVAQGGLP 681
Query: 538 EELE 541
EELE
Sbjct: 682 EELE 685
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/544 (57%), Positives = 367/544 (67%), Gaps = 42/544 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQI++ VPN E+FR LRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEE+ELGF VWDPRKNPR
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GNRIC+EIE+NK W ALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL RKEGV +E QQFDIRGTVD FR EI MYMFWKPGM++ VSHVRR+Q+
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQV 479
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGK-PCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVK 360
P++VFP+GYKRPRPSRH N Q+ K ED +S S LKR +H+ + K
Sbjct: 480 PAYVFPEGYKRPRPSRHVNHQSDKNDTEDGTATRSPDS--QLKR--KHDSVGTDDIRYAK 535
Query: 361 RASISSEVPQPVSPGKTTGDST---NDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVA 417
R+S S P+ +TGD T N + + S A+ D I
Sbjct: 536 RSSTSPVHPKNSPQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTI------- 588
Query: 418 LNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEIHSVDTVSSGSLLNVKGVAIKVD 477
L+ +CT +V + ++ S + P L+ C +V ++ +K VA KV
Sbjct: 589 LSAPRCTTTG--AVCSGDAISKHSSVP----LVENCTTPTVAVCTT-----LKRVAEKVV 637
Query: 478 QELVKPCNQMTVVEVAGREYESKSCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLT 537
ELV S+ N S E + + D L+EN V L
Sbjct: 638 SELVG----------------SERLGSNNSAELLESMEKEDVLAENVRFGGNGVAQGGLP 681
Query: 538 EELE 541
EELE
Sbjct: 682 EELE 685
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/469 (61%), Positives = 345/469 (73%), Gaps = 21/469 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL ++DE TVRSLNGCRVADQIL+ VPN+E+FR TLRCLK WAKRRGVYSNVTGFLGGV
Sbjct: 171 SVLYDIDEATVRSLNGCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGV 230
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQWRWPNPVMLC IEE+ELGF VWDPRKNPR
Sbjct: 231 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPR 290
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+IC+EIELNKA W ALFE + F
Sbjct: 291 DRTHHMPIITPAYPCMNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKANWPALFESFQF 350
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G LQCHPYP EY DPS+
Sbjct: 351 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSR 410
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AFFMGL R GV +E QQFDIRGTVD FR +I MYMFWKPGM++ VSHVRR+++
Sbjct: 411 QCAHCAFFMGLSRNVGVKIEEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEI 470
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQ-SGSSGRHLKREKEHE-MEEVRPDKSV 359
P++VFP+GY+RPRP RH + Q D + +GS LKR+ + ++ P +SV
Sbjct: 471 PAYVFPEGYRRPRPQRHVSHQQQSDKNDTENGNMTGSPDGQLKRKHDSAGTDDTEPCRSV 530
Query: 360 KRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVALN 419
KRAS +S PV P ++ S N S+ + + + M+++ +H S L
Sbjct: 531 KRASRAS--VSPVHPTTSSPSSGNISDEATC-----NNQKKMSSNASGGSQNSHGSGNLE 583
Query: 420 EQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEIHSVDTVSSGSLLN 468
+ C+ S + +S +SD +C I +TV SG + N
Sbjct: 584 QANCSGSSPASEKSTDSIASD----------SKCVIG--ETVCSGDVTN 620
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/379 (73%), Positives = 311/379 (82%), Gaps = 17/379 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL NVDEQTVRSLNGCRV +QIL+ VPNVEHFR TLRC+KFWAKRRGVYSNVTGFLGGV
Sbjct: 189 SVLYNVDEQTVRSLNGCRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNAIPSMLVSRFFRV+TQWRWPNPVML I+E+ELGF VWDPRKNPR
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+HHMPIITPAYP MNSSYNVS STLRVMTEQFQ GN++CE+IE+NKA WSALF+PY F
Sbjct: 309 DRTHHMPIITPAYPGMNSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKANWSALFDPYPF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDIVAAD DDL WKGWVESR RQLTLKIERDT G+LQCHPYP EY+D SK
Sbjct: 369 FEAYKNYLQVDIVAADQDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSK 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
CP+ AFFMGL+RK+GV +E QQFDIRGTVD FR+ +GMYMFWKPGMDIYVSHVRR+Q+
Sbjct: 429 QCPHCAFFMGLQRKQGVLIQEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQI 488
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPC----EDVKMCQSGSSGRHLKRE-----------K 346
PS+VFP+G +R R R N Q GK E C +G+ G + E +
Sbjct: 489 PSYVFPEGVRRVRSGRAAN-QIGKTSPQGRESSPKCCNGNFGDDIVEECNANSAEKANKR 547
Query: 347 EHEMEEVRPDKSVKRASIS 365
+H+M K+ KRA++S
Sbjct: 548 KHDM-TTDVGKAEKRAAVS 565
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/377 (71%), Positives = 313/377 (83%), Gaps = 5/377 (1%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL+N+DE TVRSLNGCRVADQILK VPN+E+FR TLRCLKFWAKRRGVYSNVTGFLGG
Sbjct: 100 VSVLHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGG 159
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWALLVARVCQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEE+ELGFSVW P +NP
Sbjct: 160 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNP 219
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSH MPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+ICE+IELNK WSALF PY+
Sbjct: 220 RDRSHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYV 279
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFE YKN+LQ+D+VAAD DDL WKGWVESR RQLTL IERDT G LQCHPYP EYID +
Sbjct: 280 FFEGYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDT 339
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
+ C +SAFFMGL+RK+G +E QQFDIRGTV+ FR I MYMFWKPGMDI+VSH+RRRQ
Sbjct: 340 RKCSHSAFFMGLQRKQGEVVQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQ 399
Query: 301 LPSFVFPDGYKRPRPSRHF--NEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKS 358
+P +VFPDG+KR RPSR E K ++ ++ + GR++KR +++ + V+ D
Sbjct: 400 IPCYVFPDGFKRSRPSRSTVPVENRPKSLQENEVSGTELRGRNIKR--KYDDKGVKQDVV 457
Query: 359 VKRASISSEVPQPVSPG 375
+K+ + V + ++PG
Sbjct: 458 LKKHCANPFV-ESLTPG 473
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 277/400 (69%), Positives = 312/400 (78%), Gaps = 14/400 (3%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVP----------NVEHFRM----TLRCLKFWAK 46
+SVL NVDE TVRSLNGCRVADQILK VP N+ +++ LRCLKFWAK
Sbjct: 194 VSVLYNVDEPTVRSLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWAK 253
Query: 47 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE 106
RRGVYSNVTGFLGGVNWALLVARVCQLYPNA+PSML+SRFFRVYT WRWPNPVMLC IEE
Sbjct: 254 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEE 313
Query: 107 DELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIE 166
D+LG SVWDPRKNPRDR+HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN++CEEIE
Sbjct: 314 DDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIE 373
Query: 167 LNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGL 226
LNKAQWS+LFEPYLFFE+YKNYLQVDIVAADADDL +WKGWVESRFR LTL IER T G
Sbjct: 374 LNKAQWSSLFEPYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGK 433
Query: 227 LQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK 286
LQCHPYP+EY+D SKPC + AFFMGL+RK+G +E QQFDIR +VD F+ YMFWK
Sbjct: 434 LQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWK 493
Query: 287 PGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREK 346
PGM+I+VSHVRRRQ+P FVFP+G+KR R SR Q EDV+ +SGS R LKR+
Sbjct: 494 PGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRKN 553
Query: 347 EHEMEEVRPDKSVKRASISSEVPQPVSPGKTTGDSTNDSE 386
+ E + KR SIS VS + +T SE
Sbjct: 554 DPARIEGEHNSPQKRQSISPRRQDSVSSNISNFSNTASSE 593
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/408 (65%), Positives = 311/408 (76%), Gaps = 12/408 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPNVE+FR TLRCLK+WAKRRGVYSN+TGFLGGV
Sbjct: 189 SVLCDVDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IE ++LGFS+WDPRKNPR
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYPCMNSSYNVS STLRV+ EQFQ+GN++C+EIELNKA W+ALFEP+ F
Sbjct: 309 DRNHLMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQEIELNKANWNALFEPFHF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAY+ +L VDIVA D DDL WKGW+ESR RQLTLKIERDT G+LQCHPYP EY DP+
Sbjct: 369 FEAYRKFLVVDIVAEDDDDLRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTI 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AF+MGL RKEG+ K QQFDIRGTVD F EIGMY WKPGMD+ V+HV R Q+
Sbjct: 429 ECAHCAFYMGLSRKEGLK-KRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQV 487
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEME-EVRPDKSVK 360
PS+VF GYK+P P+ H N+Q D S LKR+ + + V KSVK
Sbjct: 488 PSYVFEQGYKKPCPTMHANQQEQS---DGDGTFSPYLESQLKRKYISDGDGHVDLCKSVK 544
Query: 361 RASISSE-VPQPVSPGKTTGDSTND------SEVMSAGGHLVSEKDTM 401
RAS+S V P G + + D S V+ +G H S D +
Sbjct: 545 RASVSPPGVGTPPHLGNSVSNVVCDSPVKFVSSVVCSGAHASSSHDDI 592
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 305/558 (54%), Positives = 370/558 (66%), Gaps = 68/558 (12%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL+NVDE TVRSLNGCRVADQILK VPN+EHFR TLRCLKFWAKRRG+YSNVTGFLGG
Sbjct: 182 VSVLHNVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGG 241
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VN ALLVARVCQ YPNA+PSMLVSRFFRVYTQWRWP PVMLCPIEE+ELGF VW P KNP
Sbjct: 242 VNLALLVARVCQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNP 301
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSHHMPIITPAYPCMNSSYNVS STLRVM +QFQ+GN+IC EIEL++A W ALFE Y
Sbjct: 302 RDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYS 361
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFE+YKNYLQVD+VAADADDL +WKGWVESR RQLTL IERDT G LQCHPY +E++D S
Sbjct: 362 FFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTS 421
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
+ C + AFFMGL+RK+G +E QQFDIRGTV+ FR + MYMFWKPGM+IYVSHVRRRQ
Sbjct: 422 RLCAHCAFFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQ 481
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSG----SSGRHLKR---EKEHEMEEV 353
+P +V PDGYKR R SR P V+ C+S S H++R K ++ +V
Sbjct: 482 IPFYVVPDGYKRSRLSR--------PTSQVENCKSFHNEVSGTEHVERIRKRKNNDGVDV 533
Query: 354 RPDKSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLD-GIVN 412
R D VKR Q SP +D +A H L G ++
Sbjct: 534 RGDAIVKR--------QSASP----------------------SEDRLARHSSLGTGGLS 563
Query: 413 HESVALNEQKCTLVDDLSVINNESESSDLAEPSKPGLLGRCEIHSVDTVSSGSLLNVKGV 472
E+V+ + Q+ V+ + N+ + D E S + S+ S++ G
Sbjct: 564 VEAVS-DRQELRNVECNHLSNSGQDELDRTE-------------SPEAASNSSVITSVGS 609
Query: 473 AIKVDQELVKPCNQMTVVEVAGREYESKSCTQNLSCEGDDCVASLDTLSENGCLNSCEVF 532
+ V C + + G E + ++ S G+D V TL +N + EVF
Sbjct: 610 SEDTGSVTVAGCVEES---TGGVEMMNNGWFED-STYGNDSV----TLVKNIVASGNEVF 661
Query: 533 HNSLTEELEPSSTLGATV 550
+ L E+ +P++TLG +
Sbjct: 662 QHELQEQFQPNATLGMVL 679
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/369 (71%), Positives = 298/369 (80%), Gaps = 16/369 (4%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+SVL+NVDE TVRSLNGCRVADQILK VPNVEHFR TLRCLKFWAKRRG+YSNVTGFLGG
Sbjct: 182 VSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGG 241
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VN ALLVARVCQ YP A+PSMLVSRFFRVYTQWRWP PVMLCPIEE++LGF VW P KNP
Sbjct: 242 VNLALLVARVCQFYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNP 301
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSHHMPIITPAYPCMNSSYNVS+STLRVM EQFQ+GN+IC EIEL+K W ALFE Y
Sbjct: 302 RDRSHHMPIITPAYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKYS 361
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFE+YKNYLQVD+VAADADDL +WKGWVESR RQLTL IERDT G LQCHPY +E++D S
Sbjct: 362 FFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTS 421
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
+ C + AFFMGL RKEG +E QQFDIRGTV+ FR + MYMFWKPGM+IYVSHVRRRQ
Sbjct: 422 RQCAHCAFFMGLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQ 481
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSG--------RHLKREKEHEMEE 352
+P +VFPDGYKR RPSR P + C+S + +++ K ++ +
Sbjct: 482 IPCYVFPDGYKRSRPSR--------PTSQFENCKSFHNNEVSVTEHVERIRKRKNNDGVD 533
Query: 353 VRPDKSVKR 361
VR D VKR
Sbjct: 534 VREDAIVKR 542
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 304/394 (77%), Gaps = 7/394 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLR-CLKFWAKRRGVYSNVTGFLGG 60
SVL +VDE TVRSLNGCRVADQIL+ VPNVE + + CL + VTGFLGG
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGG 245
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEEDELGF VWDPRK
Sbjct: 246 VNWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYH 305
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSHHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+IC+EI+++KA WSALFEP+
Sbjct: 306 RDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQ 365
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS
Sbjct: 366 FFEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS 425
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
+ C + AFFMGL RKEG +E QQFDIRGTVD FR +IGMY +W+PGM++ VSHVRR+Q
Sbjct: 426 RQCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQ 485
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSS--GRHLKREKEHEMEEVRPDKS 358
+PS+VFP+GYKRPRPSRH N DV+ + S G+ ++ + + P +S
Sbjct: 486 IPSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRS 545
Query: 359 VKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGG 392
VKRASIS + PV ++ S N ++ A G
Sbjct: 546 VKRASISPSI-SPVHQKTSSPPSGNIADASGASG 578
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 304/394 (77%), Gaps = 7/394 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLR-CLKFWAKRRGVYSNVTGFLGG 60
SVL +VDE TVRSLNGCRVADQIL+ VPNVE + + CL + VTGFLGG
Sbjct: 189 SVLYDVDEVTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGG 245
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEEDELGF VWDPRK
Sbjct: 246 VNWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYH 305
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSHHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+IC+EI+++KA WSALFEP+
Sbjct: 306 RDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQ 365
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS
Sbjct: 366 FFEAYKNYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS 425
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
+ C + AFFMGL RKEG +E QQFDIRGTVD FR +IGMY +W+PGM++ VSHVRR+Q
Sbjct: 426 RQCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQ 485
Query: 301 LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSS--GRHLKREKEHEMEEVRPDKS 358
+PS+VFP+GYKRPRPSRH N DV+ + S G+ ++ + + P +S
Sbjct: 486 IPSYVFPEGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRS 545
Query: 359 VKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGG 392
VKRASIS + PV ++ S N ++ A G
Sbjct: 546 VKRASISPSI-SPVHQKTSSPPSGNIADASGASG 578
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/404 (64%), Positives = 308/404 (76%), Gaps = 5/404 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPNVE+FR TLRCLK+WAKRRGVYSN+TGFLGGV
Sbjct: 189 SVLCDVDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IE ++LGFS+WDPRKNPR
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYPCMNSSYNVS STLRV+ EQFQ+GN+IC+EIELNKA W+ALFEP+ F
Sbjct: 309 DRNHLMPIITPAYPCMNSSYNVSSSTLRVIMEQFQFGNKICQEIELNKANWNALFEPFHF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAY+ +L VDIVA + DDL WKGW+ESR RQLTLKI+RDT G+LQCHPYP EY DP+
Sbjct: 369 FEAYRKFLVVDIVAENDDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTI 428
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
C + AF+MGL RKEG + K QQFDIRGTVD F EIGMY W PGMD+ V+HV+R Q+
Sbjct: 429 ECAHCAFYMGLSRKEG-SKKRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQV 487
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEME-EVRPDKSVK 360
PS+VF GYK+P P+ H N+Q D + S LKR+ + + + V KSVK
Sbjct: 488 PSYVFEQGYKKPCPTMHANQQEQ---SDGDVTLSPYLDSQLKRKYDSDGDGHVELHKSVK 544
Query: 361 RASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAH 404
AS+S G + + DS V + S T +H
Sbjct: 545 WASVSPPGVGTPPHGNSVSNVVCDSPVKFVSSVVCSRAQTSPSH 588
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 230/316 (72%), Positives = 267/316 (84%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+DE +VRSLNGCRV DQIL+ VPN+EHFR TLRC+K WA++RGVYSNVTGFLGGV
Sbjct: 179 SILRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEE LG SVWDPRKNPR
Sbjct: 239 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPR 298
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYPCMNSSYNVS STLRVM E+F N ICE IE+NKA+WSALFEPY F
Sbjct: 299 DRTHQMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAF 358
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+AYKNYLQ+D+ AAD DDL WKGWVESR RQLTLKIE+ T G+LQCHP+P +++D SK
Sbjct: 359 FDAYKNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESK 418
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ AFFMGL++++G+ +E QQFDIR TV+ FR+ + Y WK GMDI VSHVRRRQ+
Sbjct: 419 EGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQI 478
Query: 302 PSFVFPDGYKRPRPSR 317
P++VFP G K RP +
Sbjct: 479 PAYVFPGGTKPARPPK 494
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 231/340 (67%), Positives = 274/340 (80%), Gaps = 6/340 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+DE +VRSLNGCRV DQIL+ VPN+EHFR TLRC+K WA++RGVYSNVTGFLGGV
Sbjct: 179 SILRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEE LG SVWDPRKNPR
Sbjct: 239 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPR 298
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYPCMNSSYNVS STLRVM E+F N ICE IE+NKA+WSALFEPY F
Sbjct: 299 DRTHQMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAF 358
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLK------IERDTNGLLQCHPYPNE 235
F+AYKNYLQ+D+ AAD DDL WKGWVESR RQLTLK IE+ T G+LQCHP+P +
Sbjct: 359 FDAYKNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCD 418
Query: 236 YIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSH 295
++D SK + AFFMGL++++G+ +E QQFDIR TV+ FR+ + Y WK GMDI VSH
Sbjct: 419 FVDESKEGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSH 478
Query: 296 VRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQS 335
VRRRQ+P++VFP G K RP + + + + ++ C +
Sbjct: 479 VRRRQIPAYVFPGGTKPARPPKLSSSRKAREAGSIRGCNT 518
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 229/325 (70%), Positives = 263/325 (80%), Gaps = 2/325 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV DQIL+ VPN+++FR TLRC+K WAKRRGVYSNV GFLGGV
Sbjct: 185 SILRNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGV 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PSMLV RFFRVYTQWRWPNPVMLC IEE LG VWDPRKNPR
Sbjct: 245 NWALLVARICQLYPNALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPR 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLRVMTE+FQ N+ICEE+ELNK W+ LFE Y F
Sbjct: 305 DRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILFETYPF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYL++DI A ADDL WKGW ESR R LTLKIER T G+LQCHP+P+++ DP +
Sbjct: 365 FEAYKNYLEIDISAEGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQR 424
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + FFMGL+RK+G+ +E +QFDIR TVD FR + MY WK GM+I VSH+RRR +
Sbjct: 425 PY-HCCFFMGLQRKQGMPIQEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNI 483
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKP 326
P FVFP G + PR ++ AG+P
Sbjct: 484 PLFVFPGGVRPPRTTKMLG-TAGRP 507
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/369 (67%), Positives = 291/369 (78%), Gaps = 6/369 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPN E FR TLRCLK+WA+RRGVYSNVTG LGGV
Sbjct: 184 SVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGV 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-LGFSVWDPRKNP 120
+WALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IE D+ LGF+VWDPRKNP
Sbjct: 244 SWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNP 303
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSH MPIITPAYPCMNSSYNVS STLRV+ EQFQ+GN+IC+EIELNKA WS+LFEP+
Sbjct: 304 RDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQ 363
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFEAY YL VDIVA D DDL WKGW+ESR RQLTLKIERDT G+LQCHP P EY DPS
Sbjct: 364 FFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPS 423
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
C + AF+MGL RKEG+ + Q+FDIRGTVD F EIGMY WK GMD+ V+HVR+++
Sbjct: 424 IQCAHCAFYMGLSRKEGMKIRG-QKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKE 482
Query: 301 LPSFVFPDGYKRPRPSRHF--NEQAGKPCEDVKMCQSGSSGRHLKREKEHEM--EEVRPD 356
+P +VF G ++ RP +Q D ++C + +S + K H + +V
Sbjct: 483 IPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSF 542
Query: 357 KSVKRASIS 365
KSV+RAS+S
Sbjct: 543 KSVRRASVS 551
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/369 (67%), Positives = 291/369 (78%), Gaps = 6/369 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPN E FR TLRCLK+WA+RRGVYSNVTG LGGV
Sbjct: 192 SVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGV 251
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-LGFSVWDPRKNP 120
+WALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IE D+ LGF+VWDPRKNP
Sbjct: 252 SWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNP 311
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSH MPIITPAYPCMNSSYNVS STLRV+ EQFQ+GN+IC+EIELNKA WS+LFEP+
Sbjct: 312 RDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQ 371
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFEAY YL VDIVA D DDL WKGW+ESR RQLTLKIERDT G+LQCHP P EY DPS
Sbjct: 372 FFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPS 431
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
C + AF+MGL RKEG+ + Q+FDIRGTVD F EIGMY WK GMD+ V+HVR+++
Sbjct: 432 IQCAHCAFYMGLSRKEGMKIRG-QKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKE 490
Query: 301 LPSFVFPDGYKRPRPSRHF--NEQAGKPCEDVKMCQSGSSGRHLKREKEHEM--EEVRPD 356
+P +VF G ++ RP +Q D ++C + +S + K H + +V
Sbjct: 491 IPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSF 550
Query: 357 KSVKRASIS 365
KSV+RAS+S
Sbjct: 551 KSVRRASVS 559
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/371 (67%), Positives = 293/371 (78%), Gaps = 10/371 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPN E FR TLRCLK+WA+RRGVYSNVTG LGGV
Sbjct: 160 SVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGV 219
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-LGFSVWDPRKNP 120
+WALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IE D+ LGF+VWDPRKNP
Sbjct: 220 SWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNP 279
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSH MPIITPAYPCMNSSYNVS STLRV+ EQFQ+GN+IC+EIELNKA WS+LFEP+
Sbjct: 280 RDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQ 339
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFEAY YL VDIVA D DDL WKGW+ESR RQLTLKIERDT G+LQCHP P EY DPS
Sbjct: 340 FFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPS 399
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
C + AF+MGL RKEG+ + Q+FDIRGTVD F EIGMY WK GMD+ V+HVR+++
Sbjct: 400 IQCAHCAFYMGLSRKEGMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKE 458
Query: 301 LPSFVFPDGYKRPRPSRHF----NEQAGKPCEDVKMCQSGSS--GRHLKREKEHEMEEVR 354
+P +VF G ++ RP +++GK D ++C + S G+ ++ +V
Sbjct: 459 IPLYVFEQGCQKTRPPTPICAEQQDRSGK--NDSEVCTTTVSLVGQLKRKYDSVGGADVD 516
Query: 355 PDKSVKRASIS 365
KSV+RAS+S
Sbjct: 517 SFKSVRRASVS 527
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/368 (63%), Positives = 281/368 (76%), Gaps = 4/368 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV DQIL+ VPN+++FR TLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEE LG VWDPRK P+
Sbjct: 245 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPK 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLR+M+E+F+ GN I E +E NKA W+ L EPY F
Sbjct: 305 DRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ++I A +ADDL WKGWVESR RQLTLKIER T +LQCHP+P ++ D S+
Sbjct: 365 FEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSR 424
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL+RK+GV E +QFDIR TVD F+ +GMY WKPGM+I+V HVRRR +
Sbjct: 425 PF-HCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNI 483
Query: 302 PSFVFPDGYKRPRPSRHFNE--QAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKS 358
P+FVFP G + RP++ +E + +P + G+ + KRE E+ R K
Sbjct: 484 PNFVFPGGVRPSRPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKC 543
Query: 359 VKRASISS 366
+ A+ SS
Sbjct: 544 LVAAASSS 551
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/563 (48%), Positives = 352/563 (62%), Gaps = 46/563 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV DQIL+ VPN+++FR TLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 187 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQL+PNA+P+MLVSRFFRVYTQWRWPNPVMLC IEE LG VWDPR+NP+
Sbjct: 247 NWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPK 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP MNSSYNVS STLR+M+E+FQ GN ICE +E +KA W+ LFE + F
Sbjct: 307 DRYHLMPIITPAYPSMNSSYNVSASTLRIMSEEFQRGNEICEAMEASKADWNTLFESFSF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+AYKNYLQ+DI A + DDL WKGWVESR RQLTLKIER T +LQCHP+P E+ D S+
Sbjct: 367 FDAYKNYLQIDIGAENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSR 426
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + ++FMGL+RK+GV E +QFDIR TV+ F+ + MY WKPGM+I+V+HV+RR +
Sbjct: 427 PL-HCSYFMGLQRKQGVPANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNI 485
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKR 361
PSFVFP G + RPS+ + E + S G K +++ R D +V
Sbjct: 486 PSFVFPGGIRPSRPSKTTWDSKRSSAEKSGEGKGVSDGSDDKGKRK------RIDDNVAN 539
Query: 362 ASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVALNEQ 421
A +++ +P S +G+ N S L++ + + G E V N
Sbjct: 540 A---TKIAKPDSTSPLSGEVNNGSPSAGTVSLLLTSTNAV-------GEPRDEPVENN-- 587
Query: 422 KCTLVDDLS----VINNESESSDLAEPSKPGLLGRCEIHS-------VDTVSSGSLLNVK 470
L DD S + + + +L P+K LLG E S ++T+ SG + +
Sbjct: 588 ---LTDDFSNSKDLTGFYAHNGELNPPNKV-LLGINEAPSKVAEKLAIETIMSGPYVTNQ 643
Query: 471 GVAIKVDQELVKPCNQMTVVEVAGREYESKSCTQNLSCEGDDCVASLDTL---------- 520
+ ++D EL T V+ G +K T + E + TL
Sbjct: 644 ALPQELD-ELEDDFECRTQVKDFGAGANTKD-TNDSPIESSSASTTAKTLPNAPVAAPVI 701
Query: 521 SENGCLNSCEVFHNSLTEELEPS 543
S NG S + N EELEP+
Sbjct: 702 SSNGTDPSTALCPNGGLEELEPA 724
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/369 (67%), Positives = 290/369 (78%), Gaps = 6/369 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPN E FR TLRCLK+WA+RRGVYSNVTG LGGV
Sbjct: 191 SVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGV 250
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-LGFSVWDPRKNP 120
+WALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IE D+ LGF+VWDPRKNP
Sbjct: 251 SWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNP 310
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RDRSH MPIITPAYPCMNSSYNVS STLRV+ EQFQ+GN+IC+EIELNKA WS+LFEP+
Sbjct: 311 RDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQ 370
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FFEAY YL VDIVA D DDL WKGW+ESR RQLTLKIERDT G+LQCHP P EY DPS
Sbjct: 371 FFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPS 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
C + AF+MGL RKEG+ + Q+FDIRGTVD F EIGMY WK GMD+ V+HV +++
Sbjct: 431 IQCAHCAFYMGLSRKEGMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKE 489
Query: 301 LPSFVFPDGYKRPRPSRHF--NEQAGKPCEDVKMCQSGSSGRHLKREKEHEM--EEVRPD 356
+P +VF G ++ RP +Q D ++C + +S + K H + +V
Sbjct: 490 IPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSF 549
Query: 357 KSVKRASIS 365
KSV+RAS+S
Sbjct: 550 KSVRRASVS 558
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/368 (63%), Positives = 280/368 (76%), Gaps = 4/368 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV DQIL+ VPN+++FR TLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 365 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGI 424
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEE LG VWDPRK P+
Sbjct: 425 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPK 484
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLR+M+E+F+ GN I E +E NKA W L EPY F
Sbjct: 485 DRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWXTLCEPYPF 544
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ++I A +ADDL WKGWVESR RQLTLKIER T +LQCHP+P ++ D S+
Sbjct: 545 FEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSR 604
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL+RK+GV E +QFDIR TVD F+ +GMY WKPGM+I+V HVRRR +
Sbjct: 605 PF-HCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNI 663
Query: 302 PSFVFPDGYKRPRPSRHFNE--QAGKPCEDVKMCQSGS-SGRHLKREKEHEMEEVRPDKS 358
P+FVFP G + RP++ +E + +P + G+ + KRE E+ R K
Sbjct: 664 PNFVFPGGVRPSRPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKC 723
Query: 359 VKRASISS 366
+ A+ SS
Sbjct: 724 LVAAASSS 731
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 222/336 (66%), Positives = 271/336 (80%), Gaps = 5/336 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S++ N+DEQ+V SLNGCRV DQIL+ VPN++HFR TLRC+K+WAKRRGVYSNVTGFLGG+
Sbjct: 167 SIMQNLDEQSVLSLNGCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGI 226
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELGF-SVWDPRKN 119
NWALLVAR+CQLYPNA+PS LVSRFFRVYTQWRWPNPVMLCPIEE LG VWDPRKN
Sbjct: 227 NWALLVARICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKN 286
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
PRD+SH MPIITPAYPCMNSSYNVS STLR+MT++F GN +CE++E+++A W LFE +
Sbjct: 287 PRDKSHLMPIITPAYPCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESF 346
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
FFEAY+NYLQ+D+VA D D WKGWVESR RQLTLK+E+DT G+LQCHP+P++++D
Sbjct: 347 SFFEAYRNYLQIDVVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDM 406
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
++ + A+FMGL+RK G E QQFDIR TV+ F+ + Y WKPGM+IYVSHVRR+
Sbjct: 407 ARDGYHCAYFMGLQRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRK 466
Query: 300 QLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQS 335
Q+P FV+P G K RP+R + +G P D K S
Sbjct: 467 QIPLFVYPGGVKPARPAR---QHSGSPSSDSKQGDS 499
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 220/309 (71%), Positives = 256/309 (82%), Gaps = 1/309 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV DQIL+ VPN+++FR TLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPVMLC IEE LG VWDPRK P+
Sbjct: 245 NWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPK 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLR+M+E+F+ GN I E +E NKA W+ L EPY F
Sbjct: 305 DRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ++I A +ADDL WKGWVESR RQLTLKIER T +LQCHP+P ++ D S+
Sbjct: 365 FEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSR 424
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL+RK+GV E +QFDIR TVD F+ +GMY WKPGM+I+V HVRRR +
Sbjct: 425 PF-HCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNI 483
Query: 302 PSFVFPDGY 310
P+FVFP GY
Sbjct: 484 PNFVFPGGY 492
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 221/319 (69%), Positives = 266/319 (83%), Gaps = 4/319 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVE---HFRMTLRCLKFWAKRRGVYSNVTGFL 58
S+L+N DEQTVRSLNGCRV DQIL+ VPN++ +FR TLRC++FWAKRRGVYSNV+GFL
Sbjct: 176 SMLHNADEQTVRSLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFL 235
Query: 59 GGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRK 118
GG+NWALLVAR+CQL+PNA+P+MLVSRFFRVYTQWRWPNPVMLC IEE LG SVWDPR+
Sbjct: 236 GGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRR 295
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
NP+DR H MPIITPAYP MNSSYNVS STLR+MTE+FQ GN ICE +E++KA+W LFEP
Sbjct: 296 NPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTLFEP 355
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
+ FFEAYKNYLQ+DI A + DDL WKGWVESR RQLTLKIER T +LQCHP+P E+ D
Sbjct: 356 FSFFEAYKNYLQIDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSD 415
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRR 298
S+P + ++FMGL+RK+GV E +QFDIR TVD F+ + MY WKPGM+I V+HV++
Sbjct: 416 KSRPL-HCSYFMGLQRKQGVPVNEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKK 474
Query: 299 RQLPSFVFPDGYKRPRPSR 317
R +P+FVFP G + RPS+
Sbjct: 475 RNIPNFVFPSGVRPSRPSK 493
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/336 (65%), Positives = 270/336 (80%), Gaps = 5/336 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S++ N+DEQ+V SLNGCRV DQIL+ VPN++HFR TLRC+K+WAKRRGVYSNVTGFLGG+
Sbjct: 167 SIMQNLDEQSVLSLNGCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGI 226
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELGF-SVWDPRKN 119
NWALLVAR+CQLYPNA+PS L+SRFFRVYTQWRWPNPVMLCPIEE LG VWDPRKN
Sbjct: 227 NWALLVARICQLYPNAVPSTLISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKN 286
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
PRD+SH MPIITPAYPCMNSSYNVS STLR+MT++F GN +CE++E+++A W LFE +
Sbjct: 287 PRDKSHLMPIITPAYPCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESF 346
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
FFEAY+NYLQ+D+VA D D WKGWVESR RQLTLK+E+DT G+LQCHP+P++++D
Sbjct: 347 SFFEAYRNYLQIDVVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDM 406
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
++ + A+FMGL+RK G E QQFDIR TV+ F+ + Y WK GM+IYVSHVRR+
Sbjct: 407 ARDGYHCAYFMGLQRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRK 466
Query: 300 QLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQS 335
Q+P FV+P G K RP+R + +G P D K S
Sbjct: 467 QIPLFVYPGGVKPARPAR---QHSGSPSSDSKQGDS 499
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 215/316 (68%), Positives = 261/316 (82%), Gaps = 1/316 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L NVDEQTV SLNGCRV DQ+L+ VPN++ FR TLRC++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQNVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N ALLVAR+CQLYPNA+P+MLVSRFFRVYTQWRWPNPVMLC IEE LG SVWDPR+NP+
Sbjct: 245 NLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPK 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNS+YNV+ STLRVM+++F+ G+ ICE +E +KA W LFEPY F
Sbjct: 305 DRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+YKNYLQ+DI A +ADDL WKGWVESR RQLTLKIER T G+LQCHP+P E+ D S+
Sbjct: 365 FESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSR 424
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL+RK+GV E +QFDIR TV+ F+ + Y WKPGM+I+VSHV+RR +
Sbjct: 425 PF-HHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNI 483
Query: 302 PSFVFPDGYKRPRPSR 317
P+++FP G + PS+
Sbjct: 484 PNYIFPGGVRPTFPSK 499
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 215/316 (68%), Positives = 256/316 (81%), Gaps = 1/316 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L NVDEQTV SLNGCRV DQ+L+ VPN+++FR TLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N ALLV R+CQLYPNA+P+MLVSRFFRVYTQWRWPNPVMLC IEE LG SVWDPR+NPR
Sbjct: 245 NLALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPR 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNS+YNV+ STLR+M+++F+ G ICE +E +KA W LFEPY F
Sbjct: 305 DRYHLMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ+DI A + DDL WKGWVESR RQLTLKIE+ T G+LQCHPYP E+ D S+
Sbjct: 365 FEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSR 424
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ +FMGL+RK+GV E +QFDIR TV+ F+ + Y WKPGMDI VSHV+RR +
Sbjct: 425 SF-HQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNI 483
Query: 302 PSFVFPDGYKRPRPSR 317
P+F+FP G + PSR
Sbjct: 484 PNFIFPGGVRPSVPSR 499
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 209/310 (67%), Positives = 254/310 (81%), Gaps = 1/310 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV DQIL+ VPN+++FR TLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 180 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+P+ML SRFFRVY QWRWPNPV+LC ++E G VWDPR+NP+
Sbjct: 240 NWALLVARICQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPK 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLR+MT +FQ G ICE +E NKA W LFEP+ F
Sbjct: 300 DRLHIMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ+DI AA+ +DL WKGWVESR RQLTLKIER T +LQCHP+P+++ D S+
Sbjct: 360 FEAYKNYLQIDISAANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + ++FMGL+RK+GV E +QFDIR TV+ F+ + Y W PGM+I VSH++RR L
Sbjct: 420 PL-HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSL 478
Query: 302 PSFVFPDGYK 311
P++VFP G +
Sbjct: 479 PNYVFPGGVR 488
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 214/316 (67%), Positives = 256/316 (81%), Gaps = 1/316 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV D+IL+ VPN++ FR TLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 185 SILQNTDEQTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGI 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+P+MLVSRFFRV+TQWRWPNPVMLC EE LG VWDPR+NP+
Sbjct: 245 NWALLVARICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPK 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLR+MTE+F+ G+ ICE +E NK+ W LFEPY F
Sbjct: 305 DRYHLMPIITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ+DI A + DD+ WKGWVESR RQLTLKIER T +LQCHPYP ++ D S+
Sbjct: 365 FEAYKNYLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSR 424
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL+RK+G +QFDIR TVD F+ + +Y K GM+IYVSHV+RR +
Sbjct: 425 PF-HHCYFMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSI 483
Query: 302 PSFVFPDGYKRPRPSR 317
P+FVFP G + R S+
Sbjct: 484 PNFVFPGGVRPSRASK 499
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 211/316 (66%), Positives = 256/316 (81%), Gaps = 1/316 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +VDEQTV SLNGCRV DQ+L+ VPN++ FR TLRC++FWAKRRGVYSNV GFLGG+
Sbjct: 185 SILQSVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGI 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N ALLVAR+CQLYPNA+P MLVSRFFRVYTQWRWPNPVMLC IEE LG VWDPR+NP+
Sbjct: 245 NLALLVARICQLYPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPK 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITP YPCMNS+YNV+ STLRVM+++F+ G+ ICE +E +KA W LFEPY F
Sbjct: 305 DRYHLMPIITPVYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+YKNYLQ+DI A +ADDL WKGWV SR RQLTLKIER T G+LQCHP+P E+ D S+
Sbjct: 365 FESYKNYLQIDITAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSR 424
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL+RK+GV E +QFDIR TV+ F+ + Y WKPGMDI+VSHV+R +
Sbjct: 425 PF-HHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNI 483
Query: 302 PSFVFPDGYKRPRPSR 317
P+++FP G + PS+
Sbjct: 484 PNYIFPGGVRPTFPSK 499
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/323 (70%), Positives = 257/323 (79%), Gaps = 4/323 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L DE TVRSL+GCRVADQIL+ VPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 180 SILYEADEPTVRSLSGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N ALLVARVCQLYPNA PSMLVSRFFRVYTQW WPNPVMLCPIE+ ELGF VWDPR+NP
Sbjct: 240 NLALLVARVCQLYPNANPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPL 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+HHMPIITPAYP MNSSY+VS STL M +QF N+IC +IELNK+ W ALFEP+LF
Sbjct: 300 DRNHHMPIITPAYPNMNSSYSVSTSTLEAMMKQFHTANKICNDIELNKSSWGALFEPFLF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F +Y+NYLQVDI A DADDL WKGWVESR RQLTLK+ER T G L C P P EY+D S+
Sbjct: 360 FRSYQNYLQVDITATDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI-GMYMFWKPGMDIYVSHVRRRQ 300
C + +FMGLR+K GV E DIR F+EEI M+ FW PGM+I+VSHV + Q
Sbjct: 420 QCCHCTYFMGLRKKPGVEVGE--VIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQ 477
Query: 301 LPSFVFPDGY-KRPRPSRHFNEQ 322
LPS+VFPD Y KR + S+ N+Q
Sbjct: 478 LPSYVFPDEYRKRSQSSKSINQQ 500
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 216/322 (67%), Positives = 257/322 (79%), Gaps = 1/322 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L NVDEQTVRSLNGCRV DQIL+ VPN+++FR TLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 184 TILQNVDEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PS LVSRFFRVYTQWRWPNPVMLCPIEE LG VWDPR+N +
Sbjct: 244 NWALLVARICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIK 303
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP MNSSYNVS STLR+M E+ Q GN I +E+E W LFEP+LF
Sbjct: 304 DRNHLMPIITPAYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLF 363
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ+DI A + DL WKGWVESR R LT KIERDT G+LQCHP+P E+ D S+
Sbjct: 364 FEAYKNYLQIDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSR 423
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ +FMGLRRKEG +E +QFDIR TVD+F+ + MY WK GM I+V H+RR+ +
Sbjct: 424 SF-HYCYFMGLRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNI 482
Query: 302 PSFVFPDGYKRPRPSRHFNEQA 323
P+FVFP G + P+P + EQ
Sbjct: 483 PNFVFPGGVRPPQPMKVAGEQG 504
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 215/261 (82%), Positives = 237/261 (90%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQI++ VPN+E+FR TLRCLK+WAKRRGVYSNVTGFLGGV
Sbjct: 180 SVLYDVDEATVRSLNGCRVADQIIRLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IEEDE+GF VWDPRKNPR
Sbjct: 240 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GN+IC+EIE+NKA WSALFEP+ F
Sbjct: 300 DRCHHMPIITPAYPCMNSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQVDI+A D +DL WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+
Sbjct: 360 FEAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKE 262
C + AFFMGL RKEGV +E
Sbjct: 420 QCAHCAFFMGLSRKEGVKIQE 440
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/322 (67%), Positives = 257/322 (79%), Gaps = 1/322 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L NVDEQTVRSLNGCRV DQIL+ VPN+++FR TLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 184 TILQNVDEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PS LVSRFFRVYTQWRWPNPVMLCPIEE LG VWDPR+N +
Sbjct: 244 NWALLVARICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIK 303
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP MNSSYNVS STLR+M E+ Q GN I +E+E W LFEP+LF
Sbjct: 304 DRNHLMPIITPAYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLF 363
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ+DI A + DL WKGWVESR R LT KIERDT G+LQCHP+P E+ D S+
Sbjct: 364 FEAYKNYLQIDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSR 423
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ +FMGLRRKEG +E +QFDIR TVD+F+ + MY WK GM I+V H+RR+ +
Sbjct: 424 SF-HYCYFMGLRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNI 482
Query: 302 PSFVFPDGYKRPRPSRHFNEQA 323
P+FVFP G + P+P + EQ
Sbjct: 483 PNFVFPGGVRPPQPMKVAGEQG 504
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/345 (62%), Positives = 257/345 (74%), Gaps = 30/345 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPN-----------------------------VE 32
++L DEQTVRSLNGCRV DQIL VPN V+
Sbjct: 186 AILQYTDEQTVRSLNGCRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQ 245
Query: 33 HFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQ 92
+FR TLRC+K WAK RGVYSNV GFLGG+NWALLV R+CQLYPNA+P+MLVSRFFRVYTQ
Sbjct: 246 NFRTTLRCVKLWAKCRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQ 305
Query: 93 WRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMT 152
WRWPNPVMLC I+E LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSLSTLRVMT
Sbjct: 306 WRWPNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMT 365
Query: 153 EQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRF 212
E+FQ G+ ICE +E NKA W LFEPY FFE+YKNYL++DI A + DDL WKGWV+SR
Sbjct: 366 EEFQRGDEICEAMEANKADWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRL 425
Query: 213 RQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTV 272
RQLTLKIER+T G+LQCHP+P ++ D S+P + ++FMGL+RK+GV E QFD+R TV
Sbjct: 426 RQLTLKIERNTYGMLQCHPHPGDFSDKSRPL-HCSYFMGLQRKQGVPANEGGQFDMRLTV 484
Query: 273 DNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSR 317
+ F+ + Y WKPGM+I +SHV+RR +P+FVFP G + PS+
Sbjct: 485 EEFKHSVNAYTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCPSK 529
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 205/310 (66%), Positives = 248/310 (80%), Gaps = 2/310 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV DQIL+ VPN+++FR TLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 180 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+P++LVSRFFRV+ QW WPN + LC +E LG VWDPR NP+
Sbjct: 240 NWALLVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPK 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLR+M +FQ GN ICE +E NKA W LFEP+ F
Sbjct: 300 DRLHIMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ+DI AA+ DDL WKGWVESR RQLTLKIER +L CHP+P+++ D S+
Sbjct: 360 FEAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTSR 418
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + ++FMGL+RK+GV E +QFDIR TV+ F+ + Y W PGM+I V H++RR L
Sbjct: 419 PL-HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSL 477
Query: 302 PSFVFPDGYK 311
P+FVFP G +
Sbjct: 478 PNFVFPGGVR 487
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/310 (66%), Positives = 248/310 (80%), Gaps = 2/310 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N DEQTVRSLNGCRV DQIL+ VPN+++FR TLRC++FWAKRRGVYSNV+GFLGG+
Sbjct: 53 SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGI 112
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+P++LVSRFFRV+ QW WPN + LC +E LG VWDPR NP+
Sbjct: 113 NWALLVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPK 172
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS STLR+M +FQ GN ICE +E NKA W LFEP+ F
Sbjct: 173 DRLHIMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAF 232
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FEAYKNYLQ+DI AA+ DDL WKGWVESR RQLTLKIER +L CHP+P+++ D S+
Sbjct: 233 FEAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTSR 291
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + ++FMGL+RK+GV E +QFDIR TV+ F+ + Y W PGM+I V H++RR L
Sbjct: 292 PL-HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSL 350
Query: 302 PSFVFPDGYK 311
P+FVFP G +
Sbjct: 351 PNFVFPGGVR 360
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 255/334 (76%), Gaps = 1/334 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L NVDEQ+VRSLNGCRV D+IL+ VPN+EHFR TLR +K WAKRRGVYSNV GFLGGV
Sbjct: 176 TILQNVDEQSVRSLNGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGV 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PS+L+SRFFRVY QWRWPNPVMLC IEE LG VWDPR+NPR
Sbjct: 236 NWALLVARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPR 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITP YPC NSS+NVS STLRVMTE+F+ G+ IC+ ++ A WS LFEPY F
Sbjct: 296 DRSHLMPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVADWSKLFEPYPF 355
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+YKNYLQ+DI A D +DL WKGWVESR RQL LK+E+DT G LQCHP+P+ + D SK
Sbjct: 356 FESYKNYLQIDISAGDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSK 415
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+FF+ L+RK+G FD+ T+ F+ + Y+ WKP M I+VSHVR +Q+
Sbjct: 416 RVQVCSFFVALQRKQGAPPSS-TPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQI 474
Query: 302 PSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQS 335
P++VFP+G + RP R + G ++V QS
Sbjct: 475 PTYVFPNGIRPVRPPRPTIHKPGTNPDNVPTSQS 508
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/316 (64%), Positives = 248/316 (78%), Gaps = 1/316 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L NVDEQ+VRSLNGCRV D+IL+ VPN+EHFR TLR +K WAKRRGVYSNV GFLGGV
Sbjct: 180 SILQNVDEQSVRSLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA+PS+L+SRFFRVY QWRWPNPVMLC IEE LG +WDPRKNPR
Sbjct: 240 NWALLVARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITP YPC NSS+NVS STLRVMTE+F+ G+ +C+ ++ A WS LFEPY F
Sbjct: 300 DRSHLMPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYPF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+YKNYLQ++I A D +DL WKGWVESR RQL LK+E+DT G+LQCHP+PN + D SK
Sbjct: 360 FESYKNYLQIEITAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSK 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+FF+ L+RK+G FD+ T+ F+ + Y+ WKP M I VSHVR +Q+
Sbjct: 420 KVQVCSFFVALQRKQGAQ-HSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQI 478
Query: 302 PSFVFPDGYKRPRPSR 317
P++VFP+G + RP R
Sbjct: 479 PTYVFPNGIRPVRPPR 494
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/329 (62%), Positives = 250/329 (75%), Gaps = 3/329 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+LNNVDEQTVRSLNGCRV DQIL+ VPN+ FR TLR +++W KRRGVYSNV GFLGG+
Sbjct: 180 SILNNVDEQTVRSLNGCRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGI 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWA+LV R+CQLYPNA PSML+SRFFRVY++W+WPNPVMLC IEE LG VWDPR+N R
Sbjct: 240 NWAILVGRICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS+ST VMT++F IC+ I+ KA W ALFEPY F
Sbjct: 300 DRGHQMPIITPAYPCMNSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKADWDALFEPYPF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+YKNYL+V+I A + D+L +WKGWVESR R L LKIER ++ ++ HPYP ++ D S+
Sbjct: 360 FESYKNYLEVNITARNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL RK+ +E +QFDIRG V+ F+ I Y WK GMDI VSHV+R+++
Sbjct: 420 PL-HCFYFMGLWRKQTTQTQEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEI 478
Query: 302 PSFVFPDGYKRPRPSR--HFNEQAGKPCE 328
P FVFP G + R SR H N + C+
Sbjct: 479 PLFVFPGGVRPSRSSRTAHKNSRTVPTCD 507
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/322 (62%), Positives = 248/322 (77%), Gaps = 1/322 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L+NVDEQTVRSLNGCRV D+IL+ VPN+ FR TLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 201 SILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGI 260
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA PSML+SRFF+VY++W+WPNPVMLC IEE LG VWDPR+N R
Sbjct: 261 NWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFR 320
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYP MNSSYNVS+ST VM ++F + IC+ I+ KA W ALFEPY F
Sbjct: 321 DRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPF 380
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+Y+NYL+++I A + DDL WKGWVESR R L LKIER T +L HP P ++ID S+
Sbjct: 381 FESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSR 440
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL +K+ +E +Q+DIR V+ F+ I Y W+ GM+I VSHV+R+ +
Sbjct: 441 PL-HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDI 499
Query: 302 PSFVFPDGYKRPRPSRHFNEQA 323
PSFVFP G + RPSR ++A
Sbjct: 500 PSFVFPGGIRPSRPSRTVGKEA 521
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/322 (62%), Positives = 248/322 (77%), Gaps = 1/322 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L+NVDEQTVRSLNGCRV D+IL+ VPN+ FR TLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 180 SILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGI 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA PSML+SRFF+VY++W+WPNPVMLC IEE LG VWDPR+N R
Sbjct: 240 NWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYP MNSSYNVS+ST VM ++F + IC+ I+ KA W ALFEPY F
Sbjct: 300 DRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+Y+NYL+++I A + DDL WKGWVESR R L LKIER T +L HP P ++ID S+
Sbjct: 360 FESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL +K+ +E +Q+DIR V+ F+ I Y W+ GM+I VSHV+R+ +
Sbjct: 420 PL-HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDI 478
Query: 302 PSFVFPDGYKRPRPSRHFNEQA 323
PSFVFP G + RPSR ++A
Sbjct: 479 PSFVFPGGIRPSRPSRTVGKEA 500
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/322 (62%), Positives = 248/322 (77%), Gaps = 1/322 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L+NVDEQTVRSLNGCRV D+IL+ VPN+ FR TLR ++FWAKRRGVYSNV GFLGG+
Sbjct: 180 SILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGI 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA PSML+SRFF+VY++W+WPNPVMLC IEE LG VWDPR+N R
Sbjct: 240 NWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYP MNSSYNVS+ST VM ++F + IC+ I+ KA W ALFEPY F
Sbjct: 300 DRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+Y+NYL+++I A + DDL WKGWVESR R L LKIER T +L HP P ++ID S+
Sbjct: 360 FESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL +K+ +E +Q+DIR V+ F+ I Y W+ GM+I VSHV+R+ +
Sbjct: 420 PL-HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDI 478
Query: 302 PSFVFPDGYKRPRPSRHFNEQA 323
PSFVFP G + RPSR ++A
Sbjct: 479 PSFVFPGGIRPSRPSRTVGKEA 500
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/465 (52%), Positives = 294/465 (63%), Gaps = 42/465 (9%)
Query: 81 MLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSS 140
MLVSRFFRV+TQW+WPNPVMLC IEE+ELGF VWDPRKNPRDR HHMPIITPAYPCMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 141 YNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADD 200
YNVS STLRVM EQFQ+GNRIC+EIE+NK W ALFEP+ FFEAYKNYLQVDI+A D +D
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 120
Query: 201 LLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTG 260
L WKGWVESR RQLTLKIERDT G+LQCHPYP+EY DPS+ C + AFFMGL RKEGV
Sbjct: 121 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 180
Query: 261 KERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFN 320
+E QQFDIRGTVD FR EI MYMFWKPGM++ VSHVRR+Q+P++VFP+GYKRPRPSRH N
Sbjct: 181 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 240
Query: 321 EQAGK-PCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASISSEVPQPVSPGKTTG 379
Q+ K ED +S S LKR +H+ + KR+S S P+ +TG
Sbjct: 241 HQSDKNDTEDGTATRSPDS--QLKR--KHDSVGTDDIRYAKRSSTSPVHPKNSPQSGSTG 296
Query: 380 DST---NDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVALNEQKCTLVDDLSVINNES 436
D T N + + S A+ D I L+ +CT +V + ++
Sbjct: 297 DETRCNNQIKRAPSDASGGSPASPQASERSPDTI-------LSAPRCTTTG--AVCSGDA 347
Query: 437 ESSDLAEPSKPGLLGRCEIHSVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGRE 496
S + P L+ C +V ++ +K VA KV ELV
Sbjct: 348 ISKHSSVP----LVENCTTPTVAVCTT-----LKRVAEKVVSELVG-------------- 384
Query: 497 YESKSCTQNLSCEGDDCVASLDTLSENGCLNSCEVFHNSLTEELE 541
S+ N S E + + D L+EN V L EELE
Sbjct: 385 --SERLGSNNSAELLESMEKEDVLAENVRFGGNGVAQGGLPEELE 427
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/322 (61%), Positives = 247/322 (76%), Gaps = 1/322 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L+NVDEQTVRSLNGCRV D+IL+ VPN+ FR TLR L+FWAKRRGVYSNV GFLGG+
Sbjct: 180 SILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGI 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVAR+CQLYPNA PSML+SRFF+VY++W+WPNPVMLC IEE LG VWDPR+N R
Sbjct: 240 NWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR HHMPIITPAYP MNSSYNVS+ST VM ++F + IC+ I+ +A W ALFEPY F
Sbjct: 300 DRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDEREADWDALFEPYPF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+Y+NYL+++I A + DDL WKGWVESR R L LKIER T +L HP P ++ID S+
Sbjct: 360 FESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL +K+ +E +Q+DIR V+ F+ I Y W+ GM+I VSHV+R+ +
Sbjct: 420 PL-HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDI 478
Query: 302 PSFVFPDGYKRPRPSRHFNEQA 323
PSFVFP + RPSR ++A
Sbjct: 479 PSFVFPGRIRPSRPSRTVGKEA 500
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/331 (61%), Positives = 248/331 (74%), Gaps = 4/331 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L+NVDEQTVRSLNGCRV DQIL+ VPN+ FR TLR ++ W KRRGVYSNV GFLGG+
Sbjct: 180 SILHNVDEQTVRSLNGCRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGI 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWA+LV R+CQLYPNA PSML+SRFFRVY++W+WPNPVMLC IEE LG VWDPR+N R
Sbjct: 240 NWAILVGRICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYR 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS+ST VM ++F IC+ I+ KA W ALFEPY F
Sbjct: 300 DRGHQMPIITPAYPCMNSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKADWDALFEPYPF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE+YKNYL+V+I A + DDL WKGWVESR R L LKIER ++ ++ HPYP ++ D S+
Sbjct: 360 FESYKNYLEVNITARNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSR 419
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P + +FMGL RK+ +E +QFDIRG V+ F+ I Y K GMDI VSHV+R+++
Sbjct: 420 PL-HIFYFMGLWRKQTTQAQETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEI 478
Query: 302 PSFVFPDGYKRPRPSR--HFNEQAGKPCEDV 330
P FVFP G + R SR H N +A P DV
Sbjct: 479 PLFVFPGGVRPSRTSRTTHKNSRA-IPTRDV 508
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/316 (62%), Positives = 238/316 (75%), Gaps = 1/316 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L+NVDEQ VRSLNGCRV DQIL+ VPN+ FR TLR +++W KRRGVYSNV GFLGG+
Sbjct: 178 SILHNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGI 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWA+LVAR+CQLYPNA PSML+SRFFRVY+QW+WPNPV LC IEE LG VWDPR+N R
Sbjct: 238 NWAILVARICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFR 297
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS ST VM ++F G IC+ I+ N+A W LFEPY F
Sbjct: 298 DRGHQMPIITPAYPCMNSSYNVSTSTRYVMIQEFTRGYEICQAIDENRATWDDLFEPYPF 357
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE YKNYL+V I A DDL WKGWVESR R L LK ER T+ +L HP+P ++ D S+
Sbjct: 358 FELYKNYLEVGITARSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSR 417
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P +S +FMGL RK+ +E +QFDIRG V+ F+ + Y + GMDI VSHV+R+ +
Sbjct: 418 PL-HSFYFMGLWRKQTAQPQEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDI 476
Query: 302 PSFVFPDGYKRPRPSR 317
P FVFP G + PR SR
Sbjct: 477 PLFVFPGGVRPPRSSR 492
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/316 (62%), Positives = 240/316 (75%), Gaps = 1/316 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L+NVDEQ VRSLNGCRV DQIL+ VPN+ FR TLR +++W KRRGVYSNV GFLGG+
Sbjct: 199 SILHNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGI 258
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWA+LVAR+CQLYPNA PSML+SRFFRVY+QW+WPNPV LC IEE LG VWDPR+N R
Sbjct: 259 NWAILVARICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFR 318
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYPCMNSSYNVS+ST VM ++F G IC+ I+ N+A W LFEPY F
Sbjct: 319 DRGHQMPIITPAYPCMNSSYNVSVSTRYVMVQEFTRGYEICQAIDENRATWDDLFEPYPF 378
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
FE Y+NYL+V I A + DDL WKGWVESR R L LK ER T+ +L HP+P ++ D S+
Sbjct: 379 FELYRNYLEVVISARNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSR 438
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
P +S +FMGL RK+ V +E +QFDIRG V+ F+ + Y GMDI VSHV+R+ +
Sbjct: 439 PL-HSFYFMGLWRKQTVQPQEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDI 497
Query: 302 PSFVFPDGYKRPRPSR 317
P FVFP G + PR SR
Sbjct: 498 PLFVFPGGVRPPRSSR 513
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/396 (50%), Positives = 259/396 (65%), Gaps = 19/396 (4%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSN--VTGFLGG 60
+L N DE+TV SLNGCRV D++L +++F TLRC+KFWAK GVY VT +LGG
Sbjct: 185 ILQNADEETVCSLNGCRVTDKVL-----LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGG 239
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
+NWALLVAR C L+PNA+P+MLVSRFFRVYTQW WPNPVMLC IEE +G +WDPR+ P
Sbjct: 240 INWALLVARTCXLFPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYP 299
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPIITPAY CMNSSYNVS TL +MTE+FQ GN ICE + W+ + +
Sbjct: 300 NDRFHLMPIITPAYACMNSSYNVSSITLCIMTEEFQRGNEICEYFAQDDLTWAFKLK-FP 358
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
+YKNYLQ+DI +ADDL WKGWVES RQL L+IER G+LQCHP+P + D S
Sbjct: 359 CSNSYKNYLQIDISGENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKS 418
Query: 241 KP--CPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRR 298
+P C N FM L+RK+GV + QFDIR TV+ F+ + +Y W PGMD++V HV+
Sbjct: 419 RPFHCSN---FMALQRKQGVPVNDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKH 475
Query: 299 RQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKS 358
R +P+FVFP + PS+ E K ++ KM G++ +++ E ++ +R KS
Sbjct: 476 RNIPTFVFPGSVRPSHPSKVTWEI--KKSQEGKMAVLGANDDRKRKQAEDSVDSLRNSKS 533
Query: 359 VKRASISS----EVPQPVSPGKTTGDSTNDSEVMSA 390
+ SS E P+SP + +NDSE+ S
Sbjct: 534 MASLPPSSREVHEDENPISPASSCFVKSNDSEINST 569
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/429 (51%), Positives = 262/429 (61%), Gaps = 66/429 (15%)
Query: 164 EIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDT 223
+IELNK QWSALFEPYLFFEAYKNYLQVDIVAADA DLL WKGWVESR RQLTLKIERDT
Sbjct: 210 KIELNKEQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDT 269
Query: 224 NGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM 283
+G+LQCHPYPNEYIDPSK C + AFFMGL+RKEGVTG+E QQFDIRGTVD FR++I MY+
Sbjct: 270 DGMLQCHPYPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYL 329
Query: 284 FWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLK 343
WKPGMDIYVSHVRRRQLP FVFPDGYKR RPSRH N+Q + EDV QSGS+ RH+K
Sbjct: 330 PWKPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVK 389
Query: 344 REKEHEMEEVRPDKSVKRASISSEVPQPVSPGKTTG------------------------ 379
R+ + EM +++P K KRAS S + Q VSP + G
Sbjct: 390 RKNDCEMADLKPVKPEKRASTSPQRLQSVSPSSSAGRSGMTSLASSCEGVILGCSTIGDI 449
Query: 380 -----DSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVALNEQKCTLVDDLSVINN 434
D ++SEV S L SEK + QL V ES + N Q V D ++ N
Sbjct: 450 VSNCEDVASNSEVRSTSWQLESEKSDLGDARQLGVTVYQESPS-NRQTSMDVHDSPIVRN 508
Query: 435 ESESSDLAEPSKP-GLL------------------GRCEIHSV--------------DTV 461
E E + S+P GL+ E H V +
Sbjct: 509 ELEPAAHMNGSEPMGLMFDPITKQELVSSHEVPNFETGEKHKVGVNDIIEDLGSNFLENG 568
Query: 462 SSGSLLNVKGVA---IKVDQELVKPCNQMTVVEVAGREYESKSCTQNLSCEGDDCVASLD 518
SS L+N G A ++VDQELVKPC+Q VVE A S S +QNL+ EG+ C D
Sbjct: 569 SSRKLINWVGGASRGMEVDQELVKPCSQTAVVEFAESVTSSHSGSQNLNYEGNVCAVDAD 628
Query: 519 TLSENGCLN 527
+L E+GCLN
Sbjct: 629 SLLESGCLN 637
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTL 38
SVL VDEQTVRSLNGCRVADQILK VPNVE+ +++
Sbjct: 136 SVLYEVDEQTVRSLNGCRVADQILKLVPNVEYASLSV 172
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/320 (55%), Positives = 228/320 (71%), Gaps = 15/320 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +D T RSLNG RVAD+IL+ VP+ FR TLRC+K WAK RGVYSNV GFLGGV
Sbjct: 178 SVLRGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGV 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFS--VWDPR 117
WA+LVARVC LYPNA PSML+ RFFRV+ +W+WP+PVML IE D ELG S VWDPR
Sbjct: 238 GWAILVARVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPR 297
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI---ELNKAQWSA 174
+NPRD+ H MPI+TPAYPCMNS YNVS +TLRV+TEQ G+ +C+EI W
Sbjct: 298 RNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDK 357
Query: 175 LFEPYLFFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
LF+P+ FF AYK+YLQVD + + DDL WKGWVESR R L+ ++E DT+G+L CH +
Sbjct: 358 LFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLH 417
Query: 233 PNEYI-----DPSKPCPNSAFFMGLRRKEGVTGKERQQ-FDIRGTVDNFREEIGMYMFWK 286
P Y +P + S+FF+GL + +++ Q FD+R T + F+EE+ MY +W+
Sbjct: 418 PQPYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWR 477
Query: 287 PGMDIYVSHVRRRQLPSFVF 306
PGM++ V+HVRR+ LPS+V
Sbjct: 478 PGMEVAVAHVRRKDLPSYVL 497
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 178/320 (55%), Positives = 227/320 (70%), Gaps = 15/320 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +D T RSLNG RVAD+IL+ VP+ FR TLRC+K WAK RGVYSNV GFLGGV
Sbjct: 178 SVLRGLDLATARSLNGVRVADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGV 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFS--VWDPR 117
WA+LVA VC LYPNA PSML+ RFFRV+ +W+WP+PVML IE D ELG S VWDPR
Sbjct: 238 GWAILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPR 297
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI---ELNKAQWSA 174
+NPRD+ H MPI+TPAYPCMNS YNVS +TLRV+TEQ G+ +C+EI W
Sbjct: 298 RNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDK 357
Query: 175 LFEPYLFFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
LF+P+ FF AYK+YLQVD + + DDL WKGWVESR R L+ ++E DT+G+L CH +
Sbjct: 358 LFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLH 417
Query: 233 PNEYI-----DPSKPCPNSAFFMGLRRKEGVTGKERQQ-FDIRGTVDNFREEIGMYMFWK 286
P Y +P + S+FF+GL + +++ Q FD+R T + F+EE+ MY +W+
Sbjct: 418 PQPYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWR 477
Query: 287 PGMDIYVSHVRRRQLPSFVF 306
PGM++ V+HVRR+ LPS+V
Sbjct: 478 PGMEVAVAHVRRKDLPSYVL 497
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/320 (55%), Positives = 227/320 (70%), Gaps = 15/320 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +D T RSLNG RVAD+IL+ VP+ FR TLRC+K WAK RGVYSNV GFLGGV
Sbjct: 178 SVLRGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGV 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFS--VWDPR 117
WA+LVA VC LYPNA PSML+ RFFRV+ +W+WP+PVML IE + ELG S VWDPR
Sbjct: 238 GWAILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPR 297
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI---ELNKAQWSA 174
+NPRD+ H MPI+TPAYPCMNS YNVS +TLRV+TEQ G+ +C+EI W
Sbjct: 298 RNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDK 357
Query: 175 LFEPYLFFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
LF+P+ FF AYK+YLQVD + + DDL WKGWVESR R L+ ++E DT+G+L CH +
Sbjct: 358 LFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLH 417
Query: 233 PNEYI-----DPSKPCPNSAFFMGLRRKEGVTGKERQQ-FDIRGTVDNFREEIGMYMFWK 286
P Y +P + S+FF+GL + +++ Q FD+R T + F+EE+ MY +W+
Sbjct: 418 PQPYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWR 477
Query: 287 PGMDIYVSHVRRRQLPSFVF 306
PGM++ V+HVRR+ LPS+V
Sbjct: 478 PGMEVAVAHVRRKDLPSYVL 497
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 175/315 (55%), Positives = 222/315 (70%), Gaps = 10/315 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL +D T RS+NG RVAD+IL+ VP+ FR LRC+K WAK RGVYSNV+GFLGGV
Sbjct: 181 AVLRGLDHVTARSMNGVRVADEILRLVPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIE-EDELGFSVWDPRKNP 120
WA+LVARVCQLYPNA PSMLVSRFF+V +QW+WP PVMLC IE +DELG VWD R+NP
Sbjct: 241 AWAILVARVCQLYPNAAPSMLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNP 300
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSALFEPY 179
RDR+H MP+ITPAYPCMN +YNVS +T R++ EQ Q G+ C+EI + W ALF+P+
Sbjct: 301 RDRTHLMPVITPAYPCMNCTYNVSQATQRIIKEQIQAGHVACQEIAAGGDRGWGALFQPF 360
Query: 180 LFFEAYKNYLQVD-IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY-I 237
FF +K+YLQVD VA ++L WKGWVESR RQL K+ERDT G L CH P Y
Sbjct: 361 PFFRTHKSYLQVDATVAGGEEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDA 420
Query: 238 DPSKPCPNSAFFMGLRR------KEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDI 291
+P S+FF+GL + + ++ QFD+R T D F +++ Y FW+PG+++
Sbjct: 421 EPHGLRCASSFFVGLSKPQQQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLEL 480
Query: 292 YVSHVRRRQLPSFVF 306
V HVRR+ LP +V
Sbjct: 481 AVKHVRRKDLPPYVM 495
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 232/330 (70%), Gaps = 16/330 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +D TVRS+NG RVAD+IL+ VP+ FR TLRC+K WAK RGVYSNV GF GGV
Sbjct: 178 SVLRGMDLATVRSVNGVRVADEILRLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGV 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIE--EDELGFSVWDPRKN 119
WA+LVA VCQLYPNA PS+LVSRFF+V W+WPNPV L IE +D+L VWDPR+N
Sbjct: 238 AWAILVAFVCQLYPNAAPSVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRN 297
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
PRDR+H MP++TPAYPCMNS YNVS +TLR +T+Q Q GN +C++I + A W ALFEP+
Sbjct: 298 PRDRTHLMPVVTPAYPCMNSCYNVSHATLRTITQQLQIGNAVCQKIVASGAGWGALFEPF 357
Query: 180 LFFEAYKNYLQVDIVAADA---DDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
FF+ YK+YL+VD+ A DL WKGWVESR RQL +++E T G+L CHP P Y
Sbjct: 358 HFFKEYKSYLRVDVKVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAY 417
Query: 237 -IDPSKPCPNSAFFMGLRRKEGVTGKERQQ-----FDIRGTVDNFREEIGMYMFWKPGMD 290
P+ ++FF+GL + + ++ QQ FD+R T + F+ ++ MY+ W+PGM+
Sbjct: 418 AAKPTDLQRTTSFFVGLSKPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGME 477
Query: 291 IYVSHVRRRQLPSFV----FPDGY-KRPRP 315
+ VSH RR+ LPS+V P G+ KR RP
Sbjct: 478 VEVSHNRRKDLPSYVLEQILPAGHLKRKRP 507
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/313 (55%), Positives = 221/313 (70%), Gaps = 9/313 (2%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +D T RS+NG RVAD+I++ VP+ FR TLRC+K WAK RGVYSNV+GFLGGV
Sbjct: 177 VLRGLDHVTARSMNGVRVADEIVRLVPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVA 236
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIE-EDELGFSVWDPRKNPR 121
WA+LVARVCQLYPNA+PSMLVSRFF+V++ WRWP PVMLC IE +DELG VWD R+N
Sbjct: 237 WAILVARVCQLYPNAVPSMLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLP 296
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSALFEPYL 180
DRSH MP+ITPAYPCMN +YNVS +T RV+ EQ Q G+ C++I + W ALF+P
Sbjct: 297 DRSHLMPVITPAYPCMNCTYNVSRATHRVIKEQIQAGDVACQKIAAGGGRDWGALFQPSP 356
Query: 181 FFEAYKNYLQVD-IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY-ID 238
FF +K+YLQVD VA A++L WKGWVESR RQL K+ERDT G L CH P Y +
Sbjct: 357 FFSTHKSYLQVDAAVAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAE 416
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQ-----FDIRGTVDNFREEIGMYMFWKPGMDIYV 293
P S+FF+GL + + + FD+R TV F++++ Y FW+PG+++ V
Sbjct: 417 PHGLRRASSFFVGLSKPQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVV 476
Query: 294 SHVRRRQLPSFVF 306
HVRR +LP++V
Sbjct: 477 KHVRRNKLPAYVM 489
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 137/167 (82%), Positives = 155/167 (92%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +VDE TVRSLNGCRVADQIL+ VPNVE+FR TLRCLK+WAKRRGVYSN+TGFLGGV
Sbjct: 189 SVLCDVDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
NWALLVARVCQLYPNA+PSMLVSRFFRV+TQW+WPNPVMLC IE ++LGFS+WDPRKNPR
Sbjct: 249 NWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPR 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELN 168
DR+H MPIITPAYPCMNSSYNVS STLRV+ EQFQ+GN++C+ + N
Sbjct: 309 DRNHLMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQVLPEN 355
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 215/356 (60%), Gaps = 17/356 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L N+DE+++ SLNGCRV DQILK VPN+ +FRM LRC+K WA RRG+YSN+ GFLGGV
Sbjct: 222 SFLKNIDEKSILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGV 281
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-LGFSVWDPRKNP 120
+WALL AR+CQLYPN+ PS ++ RFF+VY W+WP P++LC I+E LG VW+P+
Sbjct: 282 SWALLTARICQLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPK--- 338
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RD++H MPIITPAYP MNS+YNVS STL++M +F G I +IE + W L E
Sbjct: 339 RDKAHLMPIITPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCD 398
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI--- 237
FF Y Y+++D + + +D W+GW+ES+ R L +E T + PYP +
Sbjct: 399 FFTRYSFYIEIDCYSMNEEDSRKWEGWIESKLRFLISNLE-STPKMKFAVPYPKGFTNNL 457
Query: 238 ----DPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG---MD 290
+P + C ++FFMGL T + D+ V F I ++ +P MD
Sbjct: 458 HKANNPDQIC--TSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMD 515
Query: 291 IYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREK 346
I V +++++QLP+FV +G + P + G+P K +S +S L K
Sbjct: 516 IKVQYIKKKQLPAFVKDEGPEEPVKTTKKRSSTGEPSATRKKLKSENSDNKLNSPK 571
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 212/340 (62%), Gaps = 11/340 (3%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 197 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 256
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LGF VWDPR N D
Sbjct: 257 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISD 316
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 317 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFF 376
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK+Y+ + + A+D L W G VES+ R L +ER+ + L H P E P +P
Sbjct: 377 GKYKHYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNP-EAFPPLEP 434
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
P S +F+GL + +DI+ VD+ + K GM I V HV++R
Sbjct: 435 EPERHCSMWFIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKR 494
Query: 300 QLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSG 339
L ++V P KR R + +G ++ + +G+SG
Sbjct: 495 DLHTYVSPSLLKRER------KVSGTVHKNGNIAGNGNSG 528
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 212/340 (62%), Gaps = 11/340 (3%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 197 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 256
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LGF VWDPR N D
Sbjct: 257 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISD 316
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 317 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFF 376
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK+Y+ + + A+D L W G VES+ R L +ER+ + L H P E P +P
Sbjct: 377 GKYKHYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNP-EAFPPLEP 434
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
P S +F+GL + +DI+ VD+ + K GM I V HV++R
Sbjct: 435 EPERHCSMWFIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKR 494
Query: 300 QLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSG 339
L ++V P KR R + +G ++ + +G+SG
Sbjct: 495 DLHTYVSPSLLKRER------KVSGTVHKNGNIAGNGNSG 528
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/315 (47%), Positives = 201/315 (63%), Gaps = 5/315 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 196 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 255
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LGF VWDPR N D
Sbjct: 256 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISD 315
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 316 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFETGLSITEEIIMGKATWDKLFEPPNFF 375
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK+Y+ + + A+D L W G VES+ R L +ER+ + L H P E P +P
Sbjct: 376 GKYKHYIVLLARSLSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNP-EAFPPLEP 433
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
P S +F+GL + +DI+ VD+ + + K GM I HV+R+
Sbjct: 434 EPEGHCSMWFIGLLFAKSENLNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRK 493
Query: 300 QLPSFVFPDGYKRPR 314
L ++V P +R R
Sbjct: 494 DLHTYVSPSLLRRER 508
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/315 (47%), Positives = 200/315 (63%), Gaps = 5/315 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 193 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 252
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LG+ VWDPR N D
Sbjct: 253 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISD 312
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 313 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFF 372
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK+Y+ + + A+D L W G VES+ R L +ER+ + L H P E P KP
Sbjct: 373 GKYKHYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNP-EAFPPLKP 430
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
P S +F+GL + +DI+ VD+ + K GM I HV+R+
Sbjct: 431 EPEGHCSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRK 490
Query: 300 QLPSFVFPDGYKRPR 314
L ++V P KR R
Sbjct: 491 DLHTYVSPSLLKRER 505
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/315 (47%), Positives = 200/315 (63%), Gaps = 5/315 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 197 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 256
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LG+ VWDPR N D
Sbjct: 257 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISD 316
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 317 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFF 376
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK+Y+ + + A+D L W G VES+ R L +ER+ + L H P E P KP
Sbjct: 377 GKYKHYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNP-EAFPPLKP 434
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
P S +F+GL + +DI+ VD+ + K GM I HV+R+
Sbjct: 435 EPEGHCSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRK 494
Query: 300 QLPSFVFPDGYKRPR 314
L ++V P KR R
Sbjct: 495 DLHTYVSPSLLKRER 509
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/315 (46%), Positives = 201/315 (63%), Gaps = 5/315 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 192 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 251
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LG+ VWDPR N D
Sbjct: 252 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISD 311
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 312 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKANWDKLFEPPNFF 371
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHP--YPNEYIDP 239
YK+Y+ + ++ A+D L W G VES+ R L +ER+ + L +P +P +P
Sbjct: 372 SKYKHYIVLLARSSTAEDQLEWCGLVESKIRHLIGTLERNPHINLAHVNPEAFPPLDPEP 431
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
K C S +F+GL + +DI+ V+ + K GM I HV+R+
Sbjct: 432 DKHC--SMWFIGLLFAKSENLNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRK 489
Query: 300 QLPSFVFPDGYKRPR 314
L ++V P K+ R
Sbjct: 490 DLHTYVSPSLLKKER 504
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 213/354 (60%), Gaps = 45/354 (12%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L NVD++T RS+NG RV D IL+ VPNVE FR TLR +KFWAK RG+YSNV GFLGGV
Sbjct: 197 SILRNVDDETQRSVNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIYSNVLGFLGGV 256
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIE--EDELGFSVWDPRKN 119
+WA+LVAR+CQLYP+A ++++SRFFRVY+QW+WPNPV+L I + GF VW+P
Sbjct: 257 SWAILVARICQLYPHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVF 316
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI-------------- 165
P DR H MP+ITPAYP MNS++NVS +TLR++ E+ G I ++I
Sbjct: 317 PADRKHLMPVITPAYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTE 376
Query: 166 --------------------ELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWK 205
E WS LFE FF +KNYLQ+++++ A++ W
Sbjct: 377 DTENDQTTQVEHSEETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWH 436
Query: 206 GWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS-KPCPNSAFFMGLR----RKEGVTG 260
G+VES+ R LTLK+E ++ L+ +PYP Y P + C +FF+GL + G
Sbjct: 437 GFVESKLRVLTLKLEILSHTLI--YPYPVPYTRPGVQFC--ESFFIGLSFSLPKLPNQNG 492
Query: 261 KERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
+ ++ D+ G V + + + F M++ V HV+R+ LP +VF D R R
Sbjct: 493 SKERKIDMSGPVSEWVNYVLSWPFRTSDMEVSVEHVKRKFLPEYVFKDENHRSR 546
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 199/320 (62%), Gaps = 11/320 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SV+ N+D+ V+SLNGCRVADQ+L+ VPN + FR+ LR L+ WA+RRGVYSNV GF GGV
Sbjct: 196 SVMMNLDDPGVKSLNGCRVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDEL-GFSVWDPRKNP 120
N A+LVARVCQLYPNA PSMLV FF++++ W+W PVML PI ++ L G VWD R N
Sbjct: 256 NLAILVARVCQLYPNAAPSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNK 315
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
+R M I+TPAYP NS++NVS+STL V+ +F+ G + + I LN A+W L+
Sbjct: 316 AERYQLMKILTPAYPAQNSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTAKWEQLWCSLN 375
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F E YK+YL V I A + DD W+GWV SR + L IE T G + HP + Y DP
Sbjct: 376 FLEKYKHYLMVTISAKNEDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPE 435
Query: 241 K-PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM-------FWKPGMDIY 292
K + F+GL +E+ ++ V+ F+ + +M W PGM
Sbjct: 436 KDENSHVTLFLGLFPSSLKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQAN 495
Query: 293 VSHVRRRQLPSFVFP--DGY 310
V +++R+ LPSFV DGY
Sbjct: 496 VKYLKRKDLPSFVKEEIDGY 515
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 202/323 (62%), Gaps = 12/323 (3%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 184 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 243
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LG+ VWDPR N D
Sbjct: 244 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSD 303
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 304 RYHLMPIITPAYPQQNSTFNVSISTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFF 363
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--IDPS 240
YK+Y+ + + A+D L W G VES+ R L +ER+ + L H P + ++P
Sbjct: 364 GKYKHYIVLLAKSLTAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPE 422
Query: 241 KPCPNSAFFMGL---------RRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDI 291
S +F+GL + ++G +DI+ VD + +K GM I
Sbjct: 423 SGKHCSMWFIGLSFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWI 482
Query: 292 YVSHVRRRQLPSFVFPDGYKRPR 314
HV+R+ L ++V P KR R
Sbjct: 483 EAKHVKRKDLNTYVSPSLLKRER 505
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/321 (43%), Positives = 198/321 (61%), Gaps = 11/321 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D+ +V+SLNGCRVADQ+L+ VPN FR+ LR L+ WA+ RGVYSNV GF GGV
Sbjct: 163 SILQNLDDASVKSLNGCRVADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGV 222
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N A+LVARVCQLYPNA SMLV FF+++ W+W PVML I ++ G VWD R N
Sbjct: 223 NLAILVARVCQLYPNAAASMLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKA 282
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
+R M IITPAYP NS++NV+ STL V+ +F+ G C +I + + +W +L+EP F
Sbjct: 283 ERFQLMKIITPAYPAQNSTFNVTHSTLHVLKREFKRGRETCAKILMGQTKWESLWEPLPF 342
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F +K+YLQV + A DD W+GWV SR R L +E + G L HPYP DP+K
Sbjct: 343 FTMHKHYLQVTMCAITEDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAK 402
Query: 242 PCP-NSAFFMGL---RRKEGVTGKERQQFDIRGTVDNFREEIGMYMF-------WKPGMD 290
+ +++GL R ++ V+ F+ + ++ W+PGM+
Sbjct: 403 DSALHCIYYIGLGPAPPPTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGME 462
Query: 291 IYVSHVRRRQLPSFVFPDGYK 311
++V H++R+ +P++ PD K
Sbjct: 463 VHVKHMKRKDVPAWAIPDSGK 483
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/314 (46%), Positives = 199/314 (63%), Gaps = 3/314 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 196 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 255
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LG+ VWDPR N D
Sbjct: 256 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSD 315
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 316 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIIGKATWDKLFEPPNFF 375
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--IDPS 240
YK+Y+ + ++ A+D L W G VES+ R L +ER+ + L H P + +DP
Sbjct: 376 GKYKHYIVLLARSSSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPE 434
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
S +F+GL + + +DI+ V+ + K GM I HV+R+
Sbjct: 435 PGKHCSMWFIGLSFAKSESLNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKD 494
Query: 301 LPSFVFPDGYKRPR 314
L ++V KR R
Sbjct: 495 LHTYVSSSLVKRER 508
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 198/312 (63%), Gaps = 4/312 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D++L VPN E+FR+ LR +K WAKRRGVYSNV GFLGGV+
Sbjct: 176 LLKNLDQRCVRSLNGCRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVS 235
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELGFSVWDPRKNPR 121
WA+LVAR CQLYPNAI S L+ +FF V+++W WP PV+L I+E + LGF VWDPR NP
Sbjct: 236 WAMLVARTCQLYPNAIASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPM 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVSLST +M E+F+ G ++ +EI KA W LFEP F
Sbjct: 296 DRFHLMPIITPAYPQQNSTYNVSLSTRAIMQEEFKIGLQVTQEIFEGKATWDKLFEPGSF 355
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--IDP 239
F YK+Y+ + A + L W G VES+ R L +ER T + H P +Y ++P
Sbjct: 356 FGKYKHYIVLSTSATSKEHHLEWVGLVESKVRILIGNLER-TAYIALAHVNPKQYPPLNP 414
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
+ + +F+GL+ + G F+I+ D + K GM I VRR+
Sbjct: 415 QEDVFVTNWFIGLQFNKIEGGNIDLTFEIQSFTDTVHRQAISNGTLKEGMKIEARSVRRK 474
Query: 300 QLPSFVFPDGYK 311
QL ++ P K
Sbjct: 475 QLGEYLPPSLLK 486
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/315 (46%), Positives = 201/315 (63%), Gaps = 10/315 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 246 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 305
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST +M+E+F++G + +EI KA+WS LFEP F
Sbjct: 306 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHF 365
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ YK+Y+ + A+ ++ L W G VES+ R L +ER+ L H P + SK
Sbjct: 366 FQKYKHYIVLAASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPG-SK 423
Query: 242 PCPN-----SAFFMGLRRKEGVTGKERQ---QFDIRGTVDNFREEIGMYMFWKPGMDIYV 293
N S +F+G+ K+ + +DI+ D + K GM I
Sbjct: 424 ENRNENDFVSMWFIGIIFKKMENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEA 483
Query: 294 SHVRRRQLPSFVFPD 308
+HV+++QL ++ P+
Sbjct: 484 THVKKKQLNLYLPPE 498
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/320 (45%), Positives = 204/320 (63%), Gaps = 9/320 (2%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPNV++FR+ LR +K WAKR G+YSN G+LGGV+
Sbjct: 198 LLKNLDQKCVRSLNGCRVTDEILRLVPNVDNFRLALRAIKLWAKRHGIYSNALGYLGGVS 257
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA P+ LV +FF V++QW+WP PV+L LGF+VWDPR N +D
Sbjct: 258 WAMLVARTCQLYPNAAPATLVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQD 317
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS ST +++ E+F+ G ++ ++I L+K W LFEP LFF
Sbjct: 318 RYHLMPIITPAYPQQNSTFNVSGSTRQIIMEEFKLGLQLTDDIMLSKQTWDKLFEPPLFF 377
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHPYPNEYIDPSK 241
YK+++ + + A +D L W G VES+FR L +ER+ + L +P ++ +
Sbjct: 378 MKYKHFIVLLVSAESPEDHLEWCGLVESKFRLLIGTLERNQHITLAHINPESFSLLESQR 437
Query: 242 PCPN--SAFFMGLRRKEGVTGKERQQFDIRG---TVDNFREEIGMYMFWKPGMDIYVSHV 296
S +F+GL + FDI+ TV N I M K GM + HV
Sbjct: 438 ESNTHCSMWFIGLEFAKSENLNVNLTFDIQQFTETVQNHALNISML---KEGMKLEARHV 494
Query: 297 RRRQLPSFVFPDGYKRPRPS 316
+R+QL ++ P KR R +
Sbjct: 495 KRKQLYQYLSPSLLKRERKT 514
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 197/320 (61%), Gaps = 12/320 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL N+D+ V+SLNGCRVADQ+L+ VPN + FR+ LR L+ WA+RRG+YSNV GF GGV
Sbjct: 190 SVLLNLDDPGVKSLNGCRVADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGV 249
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDEL-GFSVWDPRKNP 120
N A+LVARVCQLYPNA SMLV FF++++ W+W PVML PI ++ L G VWD R N
Sbjct: 250 NLAILVARVCQLYPNAASSMLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNK 309
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
+R M I+TPAYP NS++NVS+STL V+ +F+ G + + I LNK +W L+
Sbjct: 310 AERYQLMKILTPAYPAQNSTFNVSVSTLEVLKAEFRRGKEVTKNILLNKCKWEDLWIKTS 369
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK+YL V I A A+D W+GWV SR + L IE T G + HP Y DP
Sbjct: 370 FLTMYKHYLMVSISAKTAEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPE 429
Query: 241 K-PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM-------FWKPGMDIY 292
K + F+GL + KE+ ++ V+ F+ ++ +M W PGM
Sbjct: 430 KEENTHVILFLGL-FPSSLKKKEKVAMNLNPAVEQFQMQVTSWMDRATGESNWVPGMQAM 488
Query: 293 VSHVRRRQLPSFVFP--DGY 310
V HV+R+ LP FV DGY
Sbjct: 489 VRHVKRKDLPGFVREEIDGY 508
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 143/318 (44%), Positives = 200/318 (62%), Gaps = 8/318 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 188 SILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 247
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 248 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 307
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST +M+E+F++G + +EI KA+W LFEP F
Sbjct: 308 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWPKLFEPPSF 367
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ YK+Y+ + A+ ++ L W G VES+ R L +ER+ L H P + +
Sbjct: 368 FQKYKHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKE 426
Query: 242 PCPNSAF----FMGLRRKEGVTGKERQ---QFDIRGTVDNFREEIGMYMFWKPGMDIYVS 294
+ F F+G+ K+ + +DI+ D + K GM I +
Sbjct: 427 NRSENDFVCMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEAT 486
Query: 295 HVRRRQLPSFVFPDGYKR 312
HV+++QL ++ P+ +R
Sbjct: 487 HVKKKQLHQYLPPELVQR 504
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 146/327 (44%), Positives = 204/327 (62%), Gaps = 12/327 (3%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAKR G+YSNV G+LGGV+
Sbjct: 194 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVS 253
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L + LG+ VWDPR N D
Sbjct: 254 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVAD 313
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST +M E F+ G I EEI + KA W LFEP FF
Sbjct: 314 RYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFF 373
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--IDPS 240
YK+Y+ + + A+D L W G VES+ R L +ER+ + L H P + ++P
Sbjct: 374 GKYKHYIVLLAKSLSAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPE 432
Query: 241 KPCPNSAFFMGL---------RRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDI 291
S +F+GL + ++G +DI+ VD + +K GM I
Sbjct: 433 SGKHCSMWFIGLAFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWI 492
Query: 292 YVSHVRRRQLPSFVFPDGYKRPRPSRH 318
HV+R+ L ++V P K+ R + +
Sbjct: 493 EAKHVKRKDLHTYVSPSLLKKERKAEN 519
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 195 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 254
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 255 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 314
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 315 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 374
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 375 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 432
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 433 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHV 491
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 492 KRKQLHQLL---------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 542
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 543 SAMKTSPLNS 552
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 426
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 427 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 485
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 486 KRKQLHQLL---------PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPT 536
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 537 SAMKTSPLNS 546
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 196/312 (62%), Gaps = 10/312 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 185 SRLRNLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 245 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPA 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS+ST VM E+F+ G + +EI L + WS LFEP F
Sbjct: 305 DRCHLMPIITPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F YK+Y+ + A+ + L W G VES+ R L +ER+ N + H P +
Sbjct: 365 FHKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERN-NFITLAHVNPQSFPGNRD 423
Query: 242 PCPN----SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI----GMYMFWKPGMDIYV 293
C + S +F+G+ K+ V E D+ + +F + + K GM I
Sbjct: 424 HCKDNEYVSMWFLGIIFKK-VENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEA 482
Query: 294 SHVRRRQLPSFV 305
+HV+R+QL ++
Sbjct: 483 THVKRKQLHHYL 494
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/402 (44%), Positives = 215/402 (53%), Gaps = 87/402 (21%)
Query: 163 EEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD 222
+EIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADA DLL WKGWVESR RQLTLK
Sbjct: 30 KEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLK---- 85
Query: 223 TNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMY 282
RKEGVTG+E QQFDIR TVD FR++I MY
Sbjct: 86 -------------------------------RKEGVTGQEGQQFDIRETVDEFRQDINMY 114
Query: 283 MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHL 342
+ WK GMDIYVSHVRRRQLP FVFPDGYKR RPSRH N+Q + EDV QSGS+ RH+
Sbjct: 115 LPWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAERHV 174
Query: 343 KREKEHEMEEVRPDKSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMA 402
KR+ + EM ++P VSP + G S S S G ++
Sbjct: 175 KRKNDCEMANLKPS---------------VSPSSSAGRSGVTSLASSCEGVILGRPTIGD 219
Query: 403 AHMQLDGIV-NHESVALNEQKCTLVDDLSVINNESESSDLAEPSKP-GLL---------- 450
+ + N E LN++ V D ++ NE E + S+P GL+
Sbjct: 220 IVSNCEDVASNSEESPLNQRTSMDVHDSPIVRNELEPAAHMNGSEPMGLMFDPITKQELV 279
Query: 451 --------GRCEIHSV--------------DTVSSGSLLNVKGVA---IKVDQELVKPCN 485
E H V + SS L+N G A ++VDQELVKPC+
Sbjct: 280 SSHEVPNFETGEKHKVGVNDIIEDLGSNFLENGSSRKLINWVGGASRGMEVDQELVKPCS 339
Query: 486 QMTVVEVAGREYESKSCTQNLSCEGDDCVASLDTLSENGCLN 527
Q VVE A S S +QNL+ EG+ C D+L E+GCLN
Sbjct: 340 QTAVVEFAESVTSSHSGSQNLNYEGNVCAVDADSLLESGCLN 381
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 196/312 (62%), Gaps = 10/312 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SRLRNLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 246 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPA 305
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS+ST VM E+F+ G + +EI L + WS LFEP F
Sbjct: 306 DRCHLMPIITPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNF 365
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F YK+Y+ + A+ + L W G VES+ R L +ER+ N + H P +
Sbjct: 366 FHKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERN-NFITLAHVNPQSFPGNRD 424
Query: 242 PCPN----SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI----GMYMFWKPGMDIYV 293
C + S +F+G+ K+ V E D+ + +F + + K GM I
Sbjct: 425 HCKDNEYVSMWFLGIIFKK-VENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEA 483
Query: 294 SHVRRRQLPSFV 305
+HV+R+QL ++
Sbjct: 484 THVKRKQLHHYL 495
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 215/369 (58%), Gaps = 20/369 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 190 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 249
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 250 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 309
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 310 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 369
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 370 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 427
Query: 241 KPCPNSAFFMGL--RRKEGVTGKERQQFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVR 297
K + + +GL ++ E +DI+ D +R+ I MF + M I HV+
Sbjct: 428 KEEFRTMWVIGLVFKKTENENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 486
Query: 298 RRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDK 357
R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 487 RKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS 537
Query: 358 SVKRASISS 366
+ K + ++S
Sbjct: 538 ATKTSPLNS 546
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 199/314 (63%), Gaps = 8/314 (2%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L NVD++ + SLNGCRV DQIL+ VPNV FRM LRC+K WA+RRGVYSNV G LGGV+W
Sbjct: 281 LKNVDDKCIVSLNGCRVTDQILRLVPNVTTFRMALRCIKLWAQRRGVYSNVLGLLGGVSW 340
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELGFSVWDPRKNPRD 122
ALL AR+CQLYPNA PS +++RFF++Y W+WP+P++LC I++ +L VW+ + RD
Sbjct: 341 ALLTARICQLYPNAAPSTIINRFFKIYDGWKWPSPILLCQIQDGGQLAAKVWNQK---RD 397
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+SH MPI+TPAYP MNS+YNVS STL ++ +F G I ++I+ + +W+ L E FF
Sbjct: 398 KSHLMPILTPAYPSMNSTYNVSRSTLSLLKSEFSRGAEITKKIDSGERKWTDLVEKGDFF 457
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
Y+ YLQ+D+ A + D W+GW+ES+ R L +E+ N PY + + +
Sbjct: 458 TRYRFYLQIDVSAPEEDTHRKWEGWIESKLRILISNLEQTPNMKFAI-PYAKSFANKASA 516
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
+ FFMGL+ + D+ G V +F I + P +++ + +++++
Sbjct: 517 VNGGICTCFFMGLQFNFSTAIGADKNVDLTGAVTSFTNLIKDWPGKLPTIEMKIHYIKKK 576
Query: 300 QLPSFVFPDGYKRP 313
LP FV +G + P
Sbjct: 577 NLPVFVKDEGPEHP 590
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 201/322 (62%), Gaps = 27/322 (8%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
NVDE+T RSLNGCRV D IL+ VPN E FR LR +K W+K RG+YSNV G+LGG++WA+
Sbjct: 196 NVDEKTARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAI 255
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE------DELGFSVWDPRKN 119
L AR+CQLYPN+ P+ +++RFF VY W+W NPV+LC I+E +GF VW+P N
Sbjct: 256 LTARICQLYPNSAPNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTN 315
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P+DR+H MPIITPA+P MNS++NV+ +TLRV+TE+ Q G+ + +EIE +AQWS L+ PY
Sbjct: 316 PQDRAHLMPIITPAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERAQWSDLWSPY 375
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
+FFE +K+++QV ++A W GW+ES+ R L K+E T LQ P+P +
Sbjct: 376 MFFENHKHFIQVKMLANSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWPKVIQES 433
Query: 240 SKPCPNSAF----FMGL------RRKEGVTGKERQQFDIRGTVDNFREEIGMYMFW---- 285
F ++GL G + D+RG + +F +G M W
Sbjct: 434 DNQKDGFQFAQCMYIGLVLCTTSGNNNGKSTGITPVVDLRGAILDF---VGFIMNWNEVE 490
Query: 286 --KPGMDIYVSHVRRRQLPSFV 305
K +D+ V H+R + LP +
Sbjct: 491 IYKDSIDLKVKHLRFKDLPKVL 512
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 202/321 (62%), Gaps = 22/321 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST +M+E+F++G + +EI KA+WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ YK+Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 369 FQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKEN 428
Query: 234 ---NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDNFREEIGMYMFWKP 287
NE++ S +F+G+ K+ + +DI+ D + K
Sbjct: 429 RNENEFV--------SMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKN 480
Query: 288 GMDIYVSHVRRRQLPSFVFPD 308
GM I +HV+++QL ++ P+
Sbjct: 481 GMKIEATHVKKKQLNLYLPPE 501
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 219 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 278
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 279 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 338
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 339 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 398
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 399 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 456
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 457 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 515
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 516 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 566
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 567 SATKTSPLNS 576
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 247/464 (53%), Gaps = 60/464 (12%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VPNV FR LRC+K WA+RR +YSNV GFLGGV
Sbjct: 178 NLLKNLDERCIRSLNGSRVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGV 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +VSRFF + QW WP PV+L IEE L VW+PR P
Sbjct: 238 AWAMLVARICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPG 297
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITPAYP M +++NV+ ST +MTE+F+ G I ++I QWSALF + F
Sbjct: 298 DRSHRMPIITPAYPAMCATHNVTESTQMIMTEEFKRGADIVDKIVFGSLQWSALFAKHDF 357
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F Y+ YLQ+ + D + W G VESR RQL +K+E + L HP+ + D +
Sbjct: 358 FHKYRYYLQIIASTGNPDLQIKWAGTVESRIRQLVMKLEY-VDALTLAHPFIKGF-DQTL 415
Query: 242 PCPN-----------------------------------SAFFMGLR---RKEGVTGKER 263
C N + FF+GL ++ G TG R
Sbjct: 416 HCLNDEEVRLCASGEVPEAVLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGPRR 475
Query: 264 QQFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYK-RPRPSRHFNE 321
DI F + + M+ + + M I V H++ LP +VF +G K + ++ N
Sbjct: 476 --LDISYPTTEFTKLVKMWDKYDESSMGIVVRHIKNSSLPDYVFEEGAKPNLKRAKSTNR 533
Query: 322 QAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASI---SSEVPQPVSPGKTT 378
GK + + + K++K++E+ DKS+ I S++ QPVS T
Sbjct: 534 GQGK-------SNNTTPDQPNKKQKKYEVF----DKSLAFFDICLASTKSDQPVSSLSTV 582
Query: 379 GDSTNDSEVMS--AGGHLVSEKDTMAAHMQLDGIVNHESVALNE 420
ST + V + G + + A ++ + N ES AL E
Sbjct: 583 QTSTAGTAVEAPPPGTTVYASTALDPASIKSPTLPNSESAALVE 626
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 540 SATKTSPLNS 549
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 540 SATKTSPLNS 549
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 540 SATKTSPLNS 549
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 540 SATKTSPLNS 549
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 208 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 267
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 268 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 327
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 328 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGPAITDEILLSKAEWSKLFEAPNFFQKY 387
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 388 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 445
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 446 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 504
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 505 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 555
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 556 SATKTSPLNS 565
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/346 (43%), Positives = 210/346 (60%), Gaps = 11/346 (3%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++D + +RSLNG RV D+IL+ VPN+E+FR+TLR +K WAKRRGVYSN+ GFLGGV+W
Sbjct: 189 LKSLDIRCIRSLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMGFLGGVSW 248
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVAR+CQLYPNA+ S L+++FF ++++W WP PV+L +EE L VWDPR NP DR
Sbjct: 249 AMLVARICQLYPNALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDR 308
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
H MPIITPAYP NS+YNVS+ST VM E+FQ G + +EI K+ WS LFEP FF+
Sbjct: 309 YHVMPIITPAYPQQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKSDWSKLFEPLNFFQ 368
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYPNEYIDPS 240
YK+Y+ + A + L W G V+S+ R L +ER+ T +Q +P +
Sbjct: 369 KYKHYIVLTASAFTEEHHLNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYK 428
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVR 297
+ S +F+GL K+ + + I+ D + K GM I ++V+
Sbjct: 429 QNAYVSMWFLGLVFKKAESAVKTNVDLTHGIQSFTDTVYRQASALNILKEGMKIEATYVK 488
Query: 298 RRQLPSFVFPDGY----KRPRPSRHFNEQAGKPCEDVKMCQSGSSG 339
R+QL F+ P G K+ R S +G C+ + +S S G
Sbjct: 489 RKQLHYFL-PAGTLQKRKKQRVSDISQNNSGLQCKRSSLGESCSDG 533
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
+ + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 REEFRTMWVIGLVLKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PSHVLQKRNKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 426
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
+ + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 427 REEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHV 485
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 486 KRKQLHQLL---------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 536
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 537 SAMKTSPLNS 546
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 216/370 (58%), Gaps = 22/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+RRQL + H ++ K +V++ S L + ++ M P
Sbjct: 489 KRRQLHQLL----------PNHVLQKKKKHSSEVRLTALNDSSLDLSMDSDNSMSVPSPT 538
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 539 SAMKTSPLNS 548
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
+ + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 REEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 216/370 (58%), Gaps = 22/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+RRQL + H ++ K +V++ S L + ++ M P
Sbjct: 489 KRRQLHQLL----------PNHVLQKKKKHSSEVRLTALNDSSLDLSMDSDNSMSVPSPT 538
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 539 SAMKTSPLNS 548
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 196/312 (62%), Gaps = 10/312 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SRLRNLDIRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 246 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPA 305
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS+ST VM E+F+ G + +EI L + WS LFEP F
Sbjct: 306 DRCHLMPIITPAYPQQNSTYNVSISTRSVMVEEFKQGLSVTDEILLGRCDWSKLFEPPNF 365
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F YK+Y+ + A+ + L W G VES+ R L +ER++ L H P +
Sbjct: 366 FHKYKHYIVLTASASTEEHHLEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRD 424
Query: 242 PCPN----SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI----GMYMFWKPGMDIYV 293
C + S +F+G+ K+ V E D+ + +F + + K GM I
Sbjct: 425 HCKDNEYVSMWFLGIIFKK-VENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMRIEA 483
Query: 294 SHVRRRQLPSFV 305
+HV+R+QL ++
Sbjct: 484 THVKRKQLHHYL 495
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 208 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 267
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 268 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 327
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 328 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 387
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 388 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 445
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 446 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 504
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 505 KRKQLHQLL---------PNHVLQKKKTHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 555
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 556 SATKTSPLNS 565
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
+ + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 REEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 215/368 (58%), Gaps = 17/368 (4%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYPNEYIDPSKP 242
K+Y+ + A L W G VES+ R L +E++ T + +P +P K
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPDKE 431
Query: 243 CPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRR 298
+ + +GL K+ + +DI+ D +R+ I MF + M I HV+R
Sbjct: 432 EFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKR 490
Query: 299 RQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKS 358
RQL + P+ ++ E V++ S L + ++ M P +
Sbjct: 491 RQLHQLL---------PNHVLQKKKKHSAEGVRLTALNDSSLDLSMDSDNSMSVPSPTSA 541
Query: 359 VKRASISS 366
+K + ++S
Sbjct: 542 MKTSPLNS 549
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 426
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
+ + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 427 REEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHV 485
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 486 KRKQLHQLL---------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 536
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 537 SAMKTSPLNS 546
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 203/351 (57%), Gaps = 41/351 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSL G RV D+IL+ VPNV FR +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 176 NLLRNLDERCIRSLGGSRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGV 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNAI +VSRFF + QW WP PV+L IEE L VW+P+ P
Sbjct: 236 AWAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPA 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITPAYP M S++NV+ ST +MTE+F+ G I +++ + A+WS LF + F
Sbjct: 296 DRSHRMPIITPAYPAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTAEWSELFAKHDF 355
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----- 236
F Y+ YLQV AD + W G VESR RQL +K+E + L+ HP+ +
Sbjct: 356 FHKYRYYLQVIASTGSADLQIKWSGTVESRIRQLVMKLEY-VDSLILAHPFIKGFEQIAY 414
Query: 237 -----------------------------IDPSKPCPNSAFFMGLR---RKEGVTGKERQ 264
++ + + F++GL ++ G G R
Sbjct: 415 CTSDEEVRAVAQGETSDAITRRKKEDIAGVEGATEVHTTTFYIGLAIEPKQPGAAGPRR- 473
Query: 265 QFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
DI F + + M+ + +P M I V H++ LP +VF +G ++PR
Sbjct: 474 -LDISYPTTEFTKLVKMWEKYDEPTMGIVVRHIKSAALPDYVFDEGERQPR 523
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 223 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 282
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 283 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 342
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 343 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 402
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 403 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 460
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 461 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHV 519
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+RRQL + PS ++ E V++ S L + ++ P
Sbjct: 520 KRRQLHQLL---------PSHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVPSPT 570
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 571 SAMKTSPLNS 580
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 251 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 310
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 311 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 370
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 371 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 430
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 431 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 488
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 489 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 547
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 548 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 598
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 599 SATKTSPLNS 608
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 194 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 253
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 254 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 313
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 314 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 373
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 374 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 431
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 432 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 490
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 491 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 541
Query: 357 KSVKRASISS 366
+ K + ++S
Sbjct: 542 SATKTSPLNS 551
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 208 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 267
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 268 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 327
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 328 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 387
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 388 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 445
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 446 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 504
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++ M P
Sbjct: 505 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPT 555
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 556 SAMKTSPLNS 565
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 213/368 (57%), Gaps = 21/368 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASI 364
+ K + +
Sbjct: 540 SATKTSPL 547
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 373 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 431 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHV 489
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++ M P
Sbjct: 490 KRKQLHQLL---------PNHVLQKKKKHSMEGVRLTALNDSSLDLSMDSDNSMSVPSPT 540
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 541 SAMKTSPLNS 550
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 426
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 427 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 485
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++ M P
Sbjct: 486 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPT 536
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 537 SAMKTSPLNS 546
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 156/364 (42%), Positives = 211/364 (57%), Gaps = 21/364 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVK 360
+ K
Sbjct: 540 SATK 543
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 230/423 (54%), Gaps = 39/423 (9%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN++ FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKY 368
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPN 245
K+Y+ + A L W G VES+ R L +E++ L H P + PS+
Sbjct: 369 KHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPSENSEK 427
Query: 246 SAF----FMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVR 297
F +GL K+ + +DI+ D +R+ I MF + M I HV+
Sbjct: 428 EEFRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ETEMKIAAMHVK 486
Query: 298 RRQ----LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEV 353
R+Q LPS V P K E VK+ S L + ++ M
Sbjct: 487 RKQLHQLLPSHVLPKKKKH-------------SVEGVKLVSLNDSSIDLSVDSDNSMSVP 533
Query: 354 RPDKSVKRASI-SSEVPQ---PVSPGKTTGDSTNDSEVM--------SAGGHLVSEKDTM 401
P + + + + SS + Q P +P + +T ++VM ++GG L
Sbjct: 534 SPTNATRTSPLNSSGLSQGNSPATPVSLSVTNTQATDVMVPQNNSTENSGGSLNESIPET 593
Query: 402 AAH 404
A H
Sbjct: 594 ATH 596
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 203/329 (61%), Gaps = 22/329 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST +M+E+F+ G + +EI KA WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ YK+Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 369 FQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKEN 428
Query: 234 ---NEYIDPSKPCPNSAFFMGLRRKEGVTG---KERQQFDIRGTVDNFREEIGMYMFWKP 287
NE++ S +F+G+ K+ +DI+ D + K
Sbjct: 429 HNENEFV--------SMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKD 480
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
GM I +HV+++QL ++ P+ +R + S
Sbjct: 481 GMTIEATHVKKKQLHHYLPPELVQRKKKS 509
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 216/382 (56%), Gaps = 37/382 (9%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 368
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 369 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKE--NPD 426
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 427 KEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHV 485
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E +++ S L + ++
Sbjct: 486 KRKQLHQLL---------PSHVLQKKKKHSTEGIRLATLNDSSLDLSMDSDN-------- 528
Query: 357 KSVKRASISSEVPQPVSPGKTT 378
S+ VP P S KT+
Sbjct: 529 --------STSVPSPTSAMKTS 542
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPN 245
K+Y+ + A L W G VES+ R L +E++ L H P + P K P+
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFQAP-KENPD 429
Query: 246 SAFF-----MGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
F +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + PS ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHPLL---------PSHVLQKKKKHSTEGVKLTPMNDSSLDLSMDSDNSMCVPSPT 539
Query: 357 KSVKRASISS 366
++K +S++S
Sbjct: 540 SAMKASSLNS 549
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 285 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 344
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 345 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 404
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 405 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 464
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 465 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 522
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 523 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 581
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++ M P
Sbjct: 582 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPT 632
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 633 SAMKTSPLNS 642
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 199 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 258
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 259 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 318
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+K +WS LFE FF+ Y
Sbjct: 319 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 378
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 379 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 436
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 437 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 495
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++ M P
Sbjct: 496 KRKQLHELL---------PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPT 546
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 547 SAMKTSPLNS 556
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 216/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ + V++ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSVPSPT 539
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 540 SAMKTSPLNS 549
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 198/318 (62%), Gaps = 20/318 (6%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + D+Q+VRSLNGCRV D IL+ VP+V HFR LRCLK WA+RRGVYSNVTG+LGGVNW
Sbjct: 177 LRHCDDQSVRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNW 236
Query: 64 ALLVARVCQLYP---------NAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED-ELGFSV 113
A+LVA VC+L P P + V +VY+QW WP P+ML IE D L V
Sbjct: 237 AILVAYVCKLQPCLLASPPHLGPAPCLPVP---QVYSQWAWPTPIMLRAIERDPSLAMPV 293
Query: 114 WDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-- 171
WDPR+NPRDR+H MPIITPAYPCMNSSYNVS TL VM E+F+ G+ +C I +
Sbjct: 294 WDPRENPRDRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGL 353
Query: 172 --WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQC 229
W+ L EP FFE +K++LQV+++A+ +D W+GWV SR R L ++ Q
Sbjct: 354 TDWAQLLEPLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMRLLIKVDQQQQQQQQQQ 413
Query: 230 HPYPNEYI--DPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKP 287
+ P++ P +FMGL +K+ + + + D+ V+ F ++ + +
Sbjct: 414 DGGGGGSVADPPAQQQPRCFYFMGLSKKKAMIIPQ-SKVDLTQPVNEFAHKVKEFEQRRE 472
Query: 288 GMDIYVSHVRRRQLPSFV 305
GMDI V H+ +RQLP +V
Sbjct: 473 GMDISVRHLLQRQLPEWV 490
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/306 (46%), Positives = 194/306 (63%), Gaps = 5/306 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + VRSLNGCRV D+IL+ VPN+++FR+ LR +K WAK+ G+YSNV G+LGGV+
Sbjct: 194 LLKNLDPKCVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVS 253
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA + LV +FF V+++W WP PV+L P + L + VWDPR N D
Sbjct: 254 WAMLVARTCQLYPNAAAATLVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSD 313
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS ST VM E+F+ G + EEI KA W LFEP FF
Sbjct: 314 RYHLMPIITPAYPQQNSTFNVSCSTRAVMQEEFRQGFNMTEEIMTGKASWDKLFEPPNFF 373
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK+++ + ++ +D L W G VES+ R L L +ER+ + L H P +Y DP +P
Sbjct: 374 VKYKHFIVLIASSSSVEDQLEWVGLVESKIRHLILALERNDHITL-AHINPEQY-DPVQP 431
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
P+ + +F+GL K+ + DI+ + K G I HV+R+
Sbjct: 432 EPDTISTMWFIGLVFKKTESLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRK 491
Query: 300 QLPSFV 305
QL S++
Sbjct: 492 QLSSYL 497
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/328 (45%), Positives = 205/328 (62%), Gaps = 34/328 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL NVD+ T RSLNG RV D IL+ VP+V+ FR TLRC+KFWAKRRG+YSNV G+LGGV
Sbjct: 192 AVLRNVDDATQRSLNGVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIYSNVLGYLGGV 251
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELG----FSVWDPR 117
WA+LVARVCQLYPNA ++++S FFR+Y+QW+WP PV LCPI + VWDP
Sbjct: 252 AWAMLVARVCQLYPNATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP- 310
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI---------ELN 168
+PRDR H MPIITPAYP MNS+YNV+ STLR+M E+F G +IC ++ ++
Sbjct: 311 TDPRDRRHLMPIITPAYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVS 370
Query: 169 KAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQ 228
W L EP FF YK+YLQ++I A + DDL W+G VESR R L ++E +
Sbjct: 371 PRDWERLLEPSDFFARYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE--VLPPVS 428
Query: 229 CHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKE----RQQFDIRGTVDNF------REE 278
HP+P + + + F+ GLR + +E R + D+ V+++ R+
Sbjct: 429 VHPWP----EADERGTSVFFYFGLRLETDKIAREEGTKRARIDLNSPVESWLSTPDPRDT 484
Query: 279 IGM-YMFW---KPGMDIYVSHVRRRQLP 302
+ + W P M ++V+ ++R QLP
Sbjct: 485 RSVPVLHWPERTPDMLVHVTPLKRAQLP 512
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 237/440 (53%), Gaps = 70/440 (15%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE+ VRSLNG RV D+IL+ VPNV FR +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 177 LLRNLDERCVRSLNGSRVTDEILRLVPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVA 236
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR+CQLYPNAI +VSRFF + QW WP PV+L IEE L VW+P+ P D
Sbjct: 237 WAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPAD 296
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R+H MPIITPAYP M +++NV+ ST +MTE+F+ G+ I +++ + A+WS LF + FF
Sbjct: 297 RAHRMPIITPAYPSMCATHNVTASTQMIMTEEFKKGSEIVDKVIVGTAEWSELFAKHDFF 356
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
++ YLQV ++D + W G VESR RQL +K+E L+ HP+ + S
Sbjct: 357 HKHRYYLQVIASTGNSDLQIKWSGTVESRIRQLVMKLEY-VESLILAHPFIKGFEQVSH- 414
Query: 243 CPNSAFFMGL-----------RRKEGVTGKER-------------------------QQF 266
C +S + RRKE + GKE ++
Sbjct: 415 CISSEEVRAVAQGEVSEAVSKRRKEDIEGKEGASTVYSTTFYIGLLIEPKLPGSSGPRKL 474
Query: 267 DIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGK 325
DI F + + M+ + + M I V H++ LP +V+ +G ++PR ++
Sbjct: 475 DISYPTTEFTKLVKMWEKYDEAKMGIIVRHIKSTALPDYVYDEGERQPRSAQ-------- 526
Query: 326 PCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASIS-----SEVPQPVSPGKTTGD 380
K +SG +K + P+K +RAS S S +P P+ P K
Sbjct: 527 -----KRVKSGKGS-----DKSNGTSPDMPNKK-RRASNSLSESTSTMPLPMQPFK---- 571
Query: 381 STNDSEVMSAGGHLVSEKDT 400
+ V S G +V+ DT
Sbjct: 572 ---KAAVSSPTGAIVAATDT 588
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 238/439 (54%), Gaps = 60/439 (13%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D++ VRSLNG RV D+IL+ VPNV FR +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 181 NLLRNLDDRCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +VSRFF + QW WP PV+L IE+ L VW+P+ P
Sbjct: 241 AWAMLVARICQLYPNAVAGAIVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPA 300
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP M +++NV+ ST +MTE+F+ + I +++ +NKA WS LF + F
Sbjct: 301 DRAHRMPIITPAYPSMCATHNVTQSTQMIMTEEFKKASEIVDKVIINKASWSDLFARHDF 360
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN------- 234
F Y+ YLQV + + W G VESR RQL +K+E L HP+
Sbjct: 361 FHKYRYYLQVIASTGSPELQVKWSGTVESRVRQLVMKLEY-VESLALAHPFIKGFEQVSY 419
Query: 235 ---------------------------EYIDPSKPCPNSAFFMGLR---RKEGVTGKERQ 264
E I+ + ++ F++GL ++ G G R
Sbjct: 420 CINDEEVRSVAQGEVSEAVARRKKEDIEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRR- 478
Query: 265 QFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQA 323
DI F + + M+ F + M I V H++ LP +VF DG ++PR ++
Sbjct: 479 -LDISYPTTEFTKLVKMWEKFDEQKMGIVVRHIKSSALPEYVFDDGERQPRLAQK----- 532
Query: 324 GKPCEDVKMCQSGSSGRHLKREKEHEMEEVR----PDKSVKRA---------SISSEVPQ 370
+P ++ S +S ++ H + E+ P ++VK + ++S V +
Sbjct: 533 -RPKKETTDRSSNTSPDMPNKKPRHSLPEMSTVTLPHETVKVSENGDTLPHHGVTSSVER 591
Query: 371 PVSPGKTTGDSTNDSEVMS 389
P + G ++ + +E+ S
Sbjct: 592 PTTNGLYANNTKDSAEIKS 610
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 194/314 (61%), Gaps = 17/314 (5%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+++L N+D++ VRSLNGCRV D+IL VPN E FR+ LR +K WAKR GVYSNV G+LGG
Sbjct: 207 VNILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGG 266
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
V+WA+LVAR CQLYPNA + LV +FF V++QW WP PV+L EE LGF VWDPR N
Sbjct: 267 VSWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNV 326
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPIITPAYP NS++NVS+STL +M ++F+ G I +EI L ++ W LFEP
Sbjct: 327 ADRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPN 386
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN------ 234
FF YK+++ + + L W G VES+ R L +ER HPY
Sbjct: 387 FFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLER--------HPYIAIAHVNP 438
Query: 235 EYIDPSKPCPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDI 291
E PS+P + S +F+GL+ + +D R VD + + +K M++
Sbjct: 439 ESFPPSEPEGDKLQSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEV 498
Query: 292 YVSHVRRRQLPSFV 305
+ +VRRR+L ++
Sbjct: 499 DIKYVRRRELVRYL 512
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/318 (47%), Positives = 195/318 (61%), Gaps = 14/318 (4%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKY 368
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPN 245
K+Y+ + A L W G VES+ R L +E++ L H P + PS+
Sbjct: 369 KHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPSENTEK 427
Query: 246 SAF----FMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVR 297
F +GL K+ + +DI+ D +R+ I MF + M I HV+
Sbjct: 428 EEFRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ENEMKIAAMHVK 486
Query: 298 RRQ----LPSFVFPDGYK 311
R+Q LPS V P K
Sbjct: 487 RKQLHQLLPSHVLPKKKK 504
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 216/382 (56%), Gaps = 37/382 (9%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 74 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 133
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 134 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 193
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 194 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 253
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 254 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKE--NPD 311
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 312 KEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHV 370
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++
Sbjct: 371 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDN-------- 413
Query: 357 KSVKRASISSEVPQPVSPGKTT 378
S+ VP P S KT+
Sbjct: 414 --------STSVPSPTSAMKTS 427
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 216/382 (56%), Gaps = 37/382 (9%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 205 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 264
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 265 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 324
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 325 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 384
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 385 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKE--NPD 442
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 443 KEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHV 501
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++
Sbjct: 502 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDN-------- 544
Query: 357 KSVKRASISSEVPQPVSPGKTT 378
S+ VP P S KT+
Sbjct: 545 --------STSVPSPTSAMKTS 558
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 215/370 (58%), Gaps = 21/370 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 290 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 349
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 350 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 409
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+K +WS LFE FF+ Y
Sbjct: 410 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 469
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 470 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 527
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 528 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 586
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ + L + ++ M P
Sbjct: 587 KRKQLHELL---------PNHVLQKKKKHSTEGVRLTPLNENSLDLSMDSDNSMSVPSPT 637
Query: 357 KSVKRASISS 366
++K + ++S
Sbjct: 638 SAMKTSPLNS 647
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 216/382 (56%), Gaps = 37/382 (9%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 191 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 250
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 251 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 310
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 311 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 370
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 371 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKE--NPD 428
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 429 KEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHV 487
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E V++ S L + ++
Sbjct: 488 KRKQLHQLL---------PNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDN-------- 530
Query: 357 KSVKRASISSEVPQPVSPGKTT 378
S+ VP P S KT+
Sbjct: 531 --------STSVPSPTSAMKTS 544
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 191/312 (61%), Gaps = 6/312 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N++E+ VRSLNGCRV D+IL VPN FRMTLR +K WAK++G+YSN GFLGGV
Sbjct: 186 SLLKNLNEKCVRSLNGCRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGV 245
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED---ELGFSVWDPRK 118
+WA+LVARVCQLYPNA P+ L+ +FF + +W WP PV+L + + L F VWDPR
Sbjct: 246 SWAMLVARVCQLYPNAAPATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRV 305
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
N DR H MPIITPAYP NS++NV+LST +MTE+ + G I +I + +W ALFEP
Sbjct: 306 NTSDRFHLMPIITPAYPQQNSTFNVTLSTRSIMTEELKDGLEIVSKIYEGREEWGALFEP 365
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDT-NGLLQCHPYPNEYI 237
FF+ YK+Y+ + A + D L W G+VES+ R L +ER+ L HP P +
Sbjct: 366 SNFFQKYKHYIVLTASAVEEKDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPL 425
Query: 238 DPSKPCPNSAFFMGLR--RKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSH 295
+ S +F+GL + E FDI+ + + K GM + + H
Sbjct: 426 NESDGEYLCRWFIGLTFVKIENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKH 485
Query: 296 VRRRQLPSFVFP 307
V+RRQL +V P
Sbjct: 486 VKRRQLDLYVPP 497
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 232/424 (54%), Gaps = 33/424 (7%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN++ FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI LNKA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +D
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVD-- 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I H+
Sbjct: 431 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 489
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
RR++L + P+ ++ E V++ S L + E+ M P
Sbjct: 490 RRKELHQLL---------PNHVLQKKETHLTEGVRLTAVNDSSLLLSIDSENSMTAPSPT 540
Query: 357 KSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAH---MQLDGIVNH 413
++K +++ PQ G ++ VM+A + D H ++ GI
Sbjct: 541 GTIKTGPLTAN-PQ--------GRNSPALAVMAASVTNIQFPDVSLQHVNPIESSGIALS 591
Query: 414 ESVA 417
ES+A
Sbjct: 592 ESIA 595
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/305 (48%), Positives = 193/305 (63%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 302 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 361
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 362 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 421
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 422 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 481
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 482 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKE--NPD 539
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 540 KEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHV 598
Query: 297 RRRQL 301
+R+QL
Sbjct: 599 KRKQL 603
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 199/351 (56%), Gaps = 41/351 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSLNG RV D+IL+ VPNV FR LRC+K WA+RR +YSNV GFLGGV
Sbjct: 185 NLLRNLDERCVRSLNGSRVTDEILRLVPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGV 244
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNAI +VSRFF + QW WP PVML PIE+ L VW+P+ P
Sbjct: 245 AWAMLVARICQLYPNAIAGAIVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPA 304
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP M +++NV+ ST +MTE+F+ + I + I + KA WS LF + F
Sbjct: 305 DRAHRMPIITPAYPSMCATHNVTQSTQMIMTEEFKKASDIVDNIIVGKASWSDLFAKHDF 364
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN------- 234
F Y+ YLQV D + W G VESR RQL +K+E L HP+
Sbjct: 365 FHKYRYYLQVIASTGGPDVQIKWSGTVESRIRQLVMKLEY-VESLALAHPFIKGFEQVSY 423
Query: 235 ---------------------------EYIDPSKPCPNSAFFMGL---RRKEGVTGKERQ 264
E ++ ++ F++GL R+ G G R
Sbjct: 424 CLTDEEVRAVAQGEISEAIAKRKKEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSVGPRR- 482
Query: 265 QFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
DI F + + M+ F + M I V H+R LP +VF +G ++PR
Sbjct: 483 -LDISYPTTEFTKLVKMWEKFDENKMGIVVRHIRSAILPDYVFDEGERQPR 532
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/351 (41%), Positives = 205/351 (58%), Gaps = 41/351 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VPNVE FR LRC+K WA+++ +YSNV GFLGGV
Sbjct: 178 NLLRNLDERCIRSLNGSRVTDEILRLVPNVEVFRDALRCIKLWAQKKAIYSNVNGFLGGV 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYP+A+ +VSRFF + QW WP PV+L IE+ L VW+PR P
Sbjct: 238 AWAMLVARICQLYPSAVAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPA 297
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITPAYP M +++NVS ST +MTE+F+ G+ I E++ + QWS LF + F
Sbjct: 298 DRSHRMPIITPAYPSMCATHNVSQSTQMIMTEEFKKGSEIVEKVIMGTTQWSELFVKHDF 357
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY--------- 232
F Y+ YLQV D D + W G VESR RQL +K+E + L HP+
Sbjct: 358 FHKYRYYLQVIASTGDPDLHIKWAGTVESRIRQLVMKLEY-VDSLTLAHPFVKGFEQVTH 416
Query: 233 ---PNEYIDPSKPCPNSAFFMGLRRKEGVTGKER-------------------------Q 264
+E D ++ + A + R+KE + GKE +
Sbjct: 417 CLTDDEVRDAAQGEISDA--IAKRKKEDIEGKEGASVVYSTTFYIGLAIEPKQAGAVGPR 474
Query: 265 QFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
+ DI F +++ M+ + + M I V H++ LP VF +G ++PR
Sbjct: 475 RLDISYPTTEFTKQVKMWEKYDESAMGIVVRHIKSTALPDHVFDEGERQPR 525
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 201/323 (62%), Gaps = 10/323 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST +M E+F+ G + +EI KA WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ L H P + SK
Sbjct: 369 FQQYRHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPG-SK 426
Query: 242 PCPN-----SAFFMGLRRKEGVTG---KERQQFDIRGTVDNFREEIGMYMFWKPGMDIYV 293
N S +F+G+ K+ +DI+ D + K GM I
Sbjct: 427 ENRNENDFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEA 486
Query: 294 SHVRRRQLPSFVFPDGYKRPRPS 316
+HV+++QL ++ P+ +R + S
Sbjct: 487 THVKKKQLHHYLPPELVQRKKKS 509
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/303 (47%), Positives = 191/303 (63%), Gaps = 8/303 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A+ L W G VES+ R L +E++ L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ-QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRR 298
+ C +GL++ E +DI+ D +R+ + MF + GM I H+RR
Sbjct: 433 EFCTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRR 491
Query: 299 RQL 301
++L
Sbjct: 492 KEL 494
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 210/361 (58%), Gaps = 21/361 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 489 KRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPP 539
Query: 357 K 357
K
Sbjct: 540 K 540
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 193/313 (61%), Gaps = 12/313 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ L H P + P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF--PGN 423
Query: 242 PCPNSA------FFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIY 292
N A +F+G+ RR E G +DI+ D + + K GM I
Sbjct: 424 KEHNKANNYVSMWFLGIIFRRVEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIE 483
Query: 293 VSHVRRRQLPSFV 305
+HV+++QL ++
Sbjct: 484 ATHVKKKQLHHYL 496
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 195/314 (62%), Gaps = 22/314 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 189 SLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 248
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 249 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 308
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST +M+E+F+ G + +EI KA WS LFEP F
Sbjct: 309 DRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNF 368
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ YK+Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 369 FQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKEN 428
Query: 234 ---NEYIDPSKPCPNSAFFMGLRRKEGVTG---KERQQFDIRGTVDNFREEIGMYMFWKP 287
NE++ S +F+G+ K+ +DI+ D + K
Sbjct: 429 HNENEFV--------SMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKD 480
Query: 288 GMDIYVSHVRRRQL 301
GM I +HV+++QL
Sbjct: 481 GMTIEATHVKKKQL 494
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 192/340 (56%), Gaps = 38/340 (11%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+S L N D+++VRSLNGCRV D +L V ++E FR LR +K WA+RRG+YSNV G+LGG
Sbjct: 169 ISTLRNADDKSVRSLNGCRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGG 228
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
VNWA+LVA C+LYP I S++V RFF+V+ +W WP P+ML IE D +G VWDPR NP
Sbjct: 229 VNWAILVAYTCKLYPCGIASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINP 288
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMT------------EQFQWGNRICEEI--E 166
RD H MPIITPAYP NSSYNVS STL M E+F+ G ++C I E
Sbjct: 289 RDSMHLMPIITPAYPAANSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAE 348
Query: 167 LNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLL-------------TWKGWVESRFR 213
+W L EP FF Y+NYLQ + + + W GWV SR R
Sbjct: 349 GGLTKWHKLLEPVPFFRNYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLR 408
Query: 214 QLTLKIERDTNGLLQCHPYPNEYIDPSKP----CPNSAF-FMGLRRK--EGVTGKERQQF 266
QL +++E + P+P P P P F FMGL++K G
Sbjct: 409 QLVMRVE----PFVTVRPWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSV 464
Query: 267 DIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVF 306
++ V F+ ++ Y+ WK GM + ++H ++ LPSFV
Sbjct: 465 NLNNPVQEFKNQVMGYLSWKEGMHVLITHQMQKALPSFVL 504
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 204/331 (61%), Gaps = 25/331 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D ++VRSLNGCRV D+IL+ VPN+++FR+ LR +K WAK+ G+YSN G+ GGV+
Sbjct: 257 LLKNLDPKSVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVS 316
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W+WP PV+L + LGF VWDPR N +D
Sbjct: 317 WAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQD 376
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS ST +VM +F G +I +EI L+KA W LFE FF
Sbjct: 377 RFHLMPIITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKAGWDKLFEAPSFF 436
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHPYPNEYID--- 238
Y++++ + + + +ADD L W G VES+ R L L +ER+ + L +P E +
Sbjct: 437 FKYRHFIVLLVTSNNADDHLEWCGLVESKIRYLILNLERNQHINLAHVNPKCFEQHEQNQ 496
Query: 239 -----------PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM---- 283
S C S +F+GL + E D+ ++ +F + + +
Sbjct: 497 TERQRESDGSRASTLC--SLWFIGLEFERS----ENLNVDLTESIQSFTDSVHKHAVHIK 550
Query: 284 FWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
K GM I HVRR+QL ++ P+ KR R
Sbjct: 551 LLKDGMKIEARHVRRKQLSQYLDPNLLKRER 581
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/407 (40%), Positives = 223/407 (54%), Gaps = 31/407 (7%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
MS+L N+D + VRSLNGCRV D ILK VPN E FR+ LR +K WAKRRG+YSN G+LGG
Sbjct: 177 MSLLKNLDAKCVRSLNGCRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGG 236
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS--VWDPRK 118
V+WA+LVAR CQLYPNA S +V +FF V+ +W WP PV+L EED LG + VW+P+
Sbjct: 237 VSWAMLVARTCQLYPNAASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQV 296
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
NP D H MPIITPAYP NS++NV+ ST VM +F+ G IC +I++ K W LFEP
Sbjct: 297 NPGDAHHLMPIITPAYPQQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGKLSWDILFEP 356
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY-- 236
FF YK+Y+ + A D+D LL W G VES+ R L K+E D + H P Y
Sbjct: 357 IKFFSLYKHYIVICATAIDSDLLLKWSGLVESKIRILIGKLE-DNENIKIAHVNPTSYPR 415
Query: 237 IDPSKPCPNSAFFMGLRRKEGVTGKE-RQQFDIRGTVDNFREEIGMYMF--WKPGMDIYV 293
I P + +F+GL G G ++I+ +++ + + + G + V
Sbjct: 416 IVPDSTDSHLMWFIGLEFCVGPGGVNITLTYEIQMFINSVVKSPALQSSPDLRNGTQLDV 475
Query: 294 SHVRRRQLPSFVFPDGY-KRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEE 352
H RRR L ++ PD P+ + F P +K + H++E
Sbjct: 476 KHARRRDLSDYLSPDIVPPLPKKKKQFPIDIETPSPILK--------------RVHKIER 521
Query: 353 VRPDKSVKRASI----SSEVPQPVSPGKTTGDSTN----DSEVMSAG 391
V + KR I S + G+ T +TN +S +MS G
Sbjct: 522 VEEPRVSKRIKIMDDPDSLTDSSIGGGEATAKTTNVDEDESSLMSTG 568
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 209/354 (59%), Gaps = 41/354 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSL G RV D+IL+ VPNVE +R +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 176 NLLRNLDERCIRSLGGSRVNDEILRLVPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGV 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +VSRFF + QW WP PV+L IEE L VW+P+ P
Sbjct: 236 AWAILVARICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPG 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITPAYP M S++NV+ ST ++TE+F+ G I +++ + A W+ LF + F
Sbjct: 296 DRSHRMPIITPAYPAMCSTHNVTQSTQMIVTEEFKKGADIVDKVIVGSATWADLFRKHDF 355
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----- 236
F Y+ YLQV + + + W G VESR RQL +K+E + L+ HP+ +
Sbjct: 356 FHKYRYYLQVIASTDNTETQIKWAGTVESRLRQLVMKLEY-VDSLILAHPFIKGFDQVCH 414
Query: 237 -----------------------------IDPSKPCPNSAFFMGLR---RKEGVTGKERQ 264
++ ++ ++AF++GL + G TG +
Sbjct: 415 CSTEDEIRSVACGEIPEAVRKRKAEDIKNVEGAQTVYSTAFYIGLEIEPKPAGATGP--R 472
Query: 265 QFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSR 317
+ DI F + + M+ + + M IYV H++ LP +VF +G ++PR +R
Sbjct: 473 KLDISYPTTEFTKLVKMWEKYNETTMGIYVRHMKSTSLPDYVFDEGERQPRQNR 526
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 193/313 (61%), Gaps = 12/313 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 179 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 239 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 298
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 299 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 358
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ L H P + P
Sbjct: 359 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF--PGN 415
Query: 242 PCPNSA------FFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIY 292
N A +F+G+ RR E G +DI+ D + + K GM I
Sbjct: 416 KEHNKANNYVSMWFLGIIFRRVEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIE 475
Query: 293 VSHVRRRQLPSFV 305
+HV+++QL ++
Sbjct: 476 ATHVKKKQLHHYL 488
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 201/327 (61%), Gaps = 27/327 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+ L N+D+Q++ SLNGCRV D+IL VP+ FRM LR +K WA+RRG+YSNV GFLGGV
Sbjct: 196 AYLKNLDDQSITSLNGCRVTDKILTLVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRW----PNPVMLCPIEEDEL-GFSVWDP 116
+WALL AR+CQLYPNA PS +++RFF++Y WRW P PV+LCPI++ + VW+
Sbjct: 256 SWALLTARICQLYPNAAPSTIINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQ 315
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF 176
+ RD+SH MPI+TPAYP MNS+YNVS STL ++ ++F GN+I +++E +A W+ L
Sbjct: 316 K---RDKSHLMPILTPAYPSMNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEANWNKLL 372
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
E FF Y+ YLQ+D A + ++ W+GW+ES+ R+L +E+ T + P+P +
Sbjct: 373 EKSDFFSRYQFYLQIDCSAQNEEEHRKWEGWIESKLRKLISFLEQ-TPKMKFAIPFPKSF 431
Query: 237 ------------------IDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
D + ++FFMGL + DI V +F
Sbjct: 432 ENKPTPAATTTAANGEAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHL 491
Query: 279 IGMYMFWKPGMDIYVSHVRRRQLPSFV 305
I + P M++ V +++RRQLP+FV
Sbjct: 492 IKDWAGKGPTMEMKVHYIKRRQLPAFV 518
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 194/314 (61%), Gaps = 17/314 (5%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+++L N+D++ VRSLNGCRV D+IL VPN E FR+ LR +K WAKR GVYSNV G+LGG
Sbjct: 258 VNILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGG 317
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
V+WA+LVAR CQLYPNA + LV +FF V++QW WP PV+L EE LGF VWDPR N
Sbjct: 318 VSWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNV 377
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPIITPAYP NS++NVS+STL +M ++F+ G I +EI L ++ W LFEP
Sbjct: 378 ADRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPN 437
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN------ 234
FF YK+++ + + L W G VES+ R L +ER HPY
Sbjct: 438 FFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLER--------HPYIAIAHVNP 489
Query: 235 EYIDPSKPCPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDI 291
E PS+P + S +F+GL+ + +D R VD + + +K M++
Sbjct: 490 ESFPPSEPEGDKLQSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEV 549
Query: 292 YVSHVRRRQLPSFV 305
+ +VRRR+L ++
Sbjct: 550 DIKYVRRRELVRYL 563
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 201/328 (61%), Gaps = 36/328 (10%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
NVD++T RSLNGCRV D IL+ VPN E FR LR +K W+K RG+YSNV G+LGG++WA+
Sbjct: 192 NVDDKTARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAI 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE------DELGFSVWDPRKN 119
L AR+CQLYPNA PS +++RFF +Y W+W NPV+LC I+E +GF VW+P N
Sbjct: 252 LTARICQLYPNAAPSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLN 311
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P+DR+H MPIITPA+P MNS++NV+ +TL V+T++ Q RI ++IE +KA W ++ P+
Sbjct: 312 PQDRAHVMPIITPAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKATWHDVWSPF 371
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
LFFE +K+++QV +++ + W GW+ES+ R L K+E T LQ P+P +
Sbjct: 372 LFFEKHKHFIQVKMLSNNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWPKAIQEQ 429
Query: 240 SKPCPNSAF----FMGL----------RRKEGVTGKERQQ-----FDIRGTVDNFREEIG 280
+ F ++GL GVTG D+RG + +F +G
Sbjct: 430 DEAKDGFIFAQSMYIGLVLNNSNSNNGSSSTGVTGVSNSSGTAPVVDLRGAILDF---VG 486
Query: 281 MYMFW------KPGMDIYVSHVRRRQLP 302
M W K +D+ V H+R + LP
Sbjct: 487 FIMNWSEVENYKDSIDLKVRHLRAKDLP 514
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 233/440 (52%), Gaps = 64/440 (14%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+DE+ VRSLNG RV ++IL+ VPNV+ FR LRC+K WA+RR +YSNV GFLGGV WA
Sbjct: 179 KNLDERCVRSLNGSRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
+LVAR+CQLYPNA+ +VSRFF + +W WP PV+L PIE+ L VW+PR P+DR+
Sbjct: 239 MLVARICQLYPNAVAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRN 298
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP M +++NV ST ++MTE+F+ G+ I +++ + QWSALF + FF
Sbjct: 299 HRMPIITPAYPSMCATHNVMASTQQIMTEEFKRGSEIVDQVISGEVQWSALFAKHDFFFR 358
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY-------- 236
Y+ YLQV + D D W G VES+ RQL +++E + L HP+ +
Sbjct: 359 YRFYLQVIASSPDLDTQNKWSGTVESKIRQLVMRLEF-VDTLKLAHPFIKGFDTVYYCLS 417
Query: 237 --------------------------IDPSKPCPNSAFFMGLR---RKEGVTGKERQQFD 267
+ + +FF+GL ++ G TG ++ D
Sbjct: 418 EDETRAVARGEIPEAVANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGP--RKLD 475
Query: 268 IRGTVDNFREEIGMYMFW----KPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQA 323
I + F I M W + M+I V H++ LP FVF G + E A
Sbjct: 476 ISYPTNEF---IKMVRLWEKYDESQMNIVVRHIKHTALPDFVFDKGER---------EAA 523
Query: 324 GKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKS--VKRASISSEVPQPVSPGKTTGDS 381
+P + + + S KR + RPD +KR++ISS+ Q +P DS
Sbjct: 524 ARPKKRSRTAKE-SPAPSAKRSRMESDTPARPDSESPLKRSTISSQGRQLSTP-----DS 577
Query: 382 TNDSEVMSAGGHLVSEKDTM 401
+ M+ H D M
Sbjct: 578 SMSFGSMTEHPHTAQTSDAM 597
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 205 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 264
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 265 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 324
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+K +WS LFE FF+ Y
Sbjct: 325 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 384
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 385 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 442
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 443 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 501
Query: 297 RRRQL 301
+R+QL
Sbjct: 502 KRKQL 506
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 228/423 (53%), Gaps = 33/423 (7%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN++ FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI LNKA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +D
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVD-- 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I H+
Sbjct: 431 KEEFRTMWVIGLVLKKPENSESLSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 489
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
+R++L + P+ ++ E V++ S L + E+ M P
Sbjct: 490 KRKELHQLL---------PNHVLQKKETHLTEGVRLTAVNDSSLLLSVDSENSMSAPSPT 540
Query: 357 KSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAH---MQLDGIVNH 413
VK ++ G G S+ VM+A + + H ++ GI
Sbjct: 541 GLVKTGPLT---------GNPQGRSSPALAVMTASVTNIQFPEVSLQHVRPIESSGIALS 591
Query: 414 ESV 416
ES+
Sbjct: 592 ESI 594
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 219/394 (55%), Gaps = 24/394 (6%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+D + +RSLNGCRV D+IL VP++++FR+TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
+LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR
Sbjct: 252 MLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP NS+YNVS+ST VM E+F+ G I EI LNKA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQK 371
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDP 239
YK+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NP 429
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSH 295
K + + +GL K+ + +DI+ D +R+ I F + M I H
Sbjct: 430 DKEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKTF-EMDMKIDAMH 488
Query: 296 VRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRP 355
+RR++L + H ++ P E V++ + S L + E+ M P
Sbjct: 489 LRRKELHQLL----------PNHVLQKKKHPAEGVRL--TAVSDSSLGTDSENSMPVPSP 536
Query: 356 DKSVKRASISSEVPQPVSPGKTTGDSTNDSEVMS 389
V + P P + G ST SEV S
Sbjct: 537 TGLVTGSCPGRSSPAPAVLSVSLGSSTQPSEVAS 570
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 205 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 264
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 265 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 324
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+K +WS LFE FF+ Y
Sbjct: 325 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 384
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 385 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 442
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 443 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 501
Query: 297 RRRQL 301
+R+QL
Sbjct: 502 KRKQL 506
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 201/343 (58%), Gaps = 19/343 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 246 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 305
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + EI K+ WS L EP F
Sbjct: 306 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSDWSKLLEPPNF 365
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEY 236
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ L Q P E+
Sbjct: 366 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 425
Query: 237 IDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYV 293
S S +F+G+ RR E +DI+ D + K GM I
Sbjct: 426 YKESDYV--SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 483
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSG 336
+HV+++QL ++ P+ F ++ + +D+ SG
Sbjct: 484 THVKKKQLHHYL---------PAEIFQKKKKQSLQDINRSASG 517
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 228/423 (53%), Gaps = 33/423 (7%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN++ FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI LNKA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E D
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD-- 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I H+
Sbjct: 431 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 489
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
RR++L + P+ ++ E V++ S L + E+ M P
Sbjct: 490 RRKELHQLL---------PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPT 540
Query: 357 KSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAH---MQLDGIVNH 413
++K ++ G G ++ VM+A + D H ++ GI
Sbjct: 541 GTMKTGPLT---------GNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSGIALS 591
Query: 414 ESV 416
ES+
Sbjct: 592 ESI 594
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 228/423 (53%), Gaps = 33/423 (7%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN++ FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI LNKA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD-- 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I H+
Sbjct: 430 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
RR++L + P+ ++ E V++ S L + E+ M P
Sbjct: 489 RRKELHQLL---------PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPT 539
Query: 357 KSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAH---MQLDGIVNH 413
++K ++ G G ++ VM+A + D H ++ GI
Sbjct: 540 GTMKTGPLT---------GNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSGIALS 590
Query: 414 ESV 416
ES+
Sbjct: 591 ESI 593
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 150/319 (47%), Positives = 194/319 (60%), Gaps = 16/319 (5%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN++ FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 174 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 233
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 234 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 293
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L KA+WS LF+ FF+ Y
Sbjct: 294 LMPIITPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKY 353
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPN 245
K+Y+ + A L W G VES+ R L +E++ L H P + PS+
Sbjct: 354 KHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPRSFPAPSENMEK 412
Query: 246 SAF----FMGLRRKEGVTGKERQQFDIRGTVDNF-----REEIGMYMFWKPGMDIYVSHV 296
F +GL K+ + E D+ + +F R+ I MF + M I HV
Sbjct: 413 EEFRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVDRQAINSKMF-ETEMKIAAMHV 470
Query: 297 RRRQL----PSFVFPDGYK 311
+R+QL PS V P K
Sbjct: 471 KRKQLHQLQPSHVSPKKKK 489
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 147/305 (48%), Positives = 193/305 (63%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRXIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQL 301
+R+QL
Sbjct: 489 KRKQL 493
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/305 (48%), Positives = 193/305 (63%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRXIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 430 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 488
Query: 297 RRRQL 301
+R+QL
Sbjct: 489 KRKQL 493
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 207/355 (58%), Gaps = 43/355 (12%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSLNG RV D+IL+ VPNV FR +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 176 NLLRNLDERCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGV 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNAI +VSRFF + QW WP PV+L IE+ L VW+P+ P
Sbjct: 236 AWAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPA 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP M +++NVS ST +MTE+F+ G+ I +++ + KA WS LF + F
Sbjct: 296 DRAHRMPIITPAYPSMCATHNVSASTQMIMTEEFKKGSEIVDKVIVGKANWSELFAKHDF 355
Query: 182 FEAYKNYLQVDIVAADADDLLT-WKGWVESRFRQLTLKIERDTNGLLQCHPYPN------ 234
F Y+ YLQV I + + +L T W G VESR RQL +K+E + L HP+
Sbjct: 356 FHKYRYYLQV-IASTGSQELQTKWAGTVESRIRQLVMKLEY-VDSLTLAHPFIKGFEQVS 413
Query: 235 ----------------------------EYIDPSKPCPNSAFFMGLR---RKEGVTGKER 263
E D + ++ F++GL ++ G G
Sbjct: 414 CCLSDEEVRAVAQGEISEVIAKRKKEDIEGKDGASTVYSTTFYIGLAIEPKQPGAVGP-- 471
Query: 264 QQFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSR 317
++ DI F + + M+ + M I V H++ LP +VF G ++PR ++
Sbjct: 472 RKLDISYPTTEFTKLVKMWEKYDDSTMGIVVRHIKSTALPDYVFEPGERQPRSAQ 526
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 205 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 264
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 265 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 324
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+K +WS LFE FF+ Y
Sbjct: 325 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 384
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 385 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 442
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 443 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 501
Query: 297 RRRQL 301
+R+QL
Sbjct: 502 KRKQL 506
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 141/326 (43%), Positives = 202/326 (61%), Gaps = 18/326 (5%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D ++VRSLNGCRV D+IL+ VPN+++FR+ LR +K WAK+ G+YSN G+ GGV+
Sbjct: 201 LLKNLDPKSVRSLNGCRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVS 260
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W+WP PV+L + LGF VWDPR N +D
Sbjct: 261 WAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQD 320
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS ST +VM +F G +I +EI L KA W LFE FF
Sbjct: 321 RFHLMPIITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFF 380
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHP---------Y 232
Y++++ + + + +ADD L W G VES+ R L +ER+ + L +P
Sbjct: 381 FKYRHFIVLLVTSNNADDHLEWCGLVESKIRYLIQNLERNLHINLAHVNPKCFEQQEQNQ 440
Query: 233 PNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM----FWKPG 288
++ + K S +F+GL + E D+ ++ NF + + + K G
Sbjct: 441 KDDGGEGGKTTLCSLWFIGLEFERS----ENLNVDLTESIQNFTDAVHKHAVHIKVLKDG 496
Query: 289 MDIYVSHVRRRQLPSFVFPDGYKRPR 314
M I HVRR+QL ++ P+ KR R
Sbjct: 497 MKIEARHVRRKQLNQYLDPNLLKRER 522
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 205/328 (62%), Gaps = 20/328 (6%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D+++VRSLNGCRV D+IL+ VPN+++FR+ LR +K WAKR G+YSN G+ GGV+
Sbjct: 191 LLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRHGIYSNSLGYFGGVS 250
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W+WP PV+L + LGF VWDPR N +D
Sbjct: 251 WAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQD 310
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS ST +VM +F G +I ++I + K W LFE FF
Sbjct: 311 RFHLMPIITPAYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQMWEKLFEAPSFF 370
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHPYPNEYIDPS- 240
Y++++ + + +++ADD L W G VES+ R L +ER+ + L +P E + +
Sbjct: 371 YRYRHFIVLLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNS 430
Query: 241 ---------KPCPN-SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM----FWK 286
KP P S +F+GL + E D+ ++ +F + + + K
Sbjct: 431 ATTLNGADGKPTPFCSLWFIGLEFERS----ENLNVDLTESIQSFTDSVHKHAVHIKLLK 486
Query: 287 PGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
GM I HVRR+QL ++ P+ KR R
Sbjct: 487 DGMKIEARHVRRKQLTQYLDPNLLKRER 514
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 200/349 (57%), Gaps = 31/349 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPA 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSG 336
GM I +HV+++QL ++ PS ++ + DV G
Sbjct: 479 GMKIEATHVKKKQLHHYL---------PSETLQKKKKQSLSDVSRSSGG 518
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 205 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 264
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 265 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 324
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+K +WS LFE FF+ Y
Sbjct: 325 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKY 384
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 385 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 442
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I HV
Sbjct: 443 KEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 501
Query: 297 RRRQL 301
+R+QL
Sbjct: 502 KRKQL 506
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 202/353 (57%), Gaps = 31/353 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGR 340
GM I +HV+++QL ++ P+ ++ + DV SG +
Sbjct: 479 GMKIEATHVKKKQLHHYL---------PAEILQKKKKQSLSDVTRSSSGPQSK 522
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPTNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKANNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKD 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 202/353 (57%), Gaps = 31/353 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGR 340
GM I +HV+++QL ++ P+ ++ + DV SG +
Sbjct: 479 GMKIEATHVKKKQLHHYL---------PAEILQKKKKQSLSDVTRSSSGPQSK 522
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 202/353 (57%), Gaps = 31/353 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGR 340
GM I +HV+++QL ++ P+ ++ + DV SG +
Sbjct: 479 GMKIEATHVKKKQLHHYL---------PAEILQKKKKQSLSDVTRSSSGPQSK 522
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/423 (39%), Positives = 227/423 (53%), Gaps = 33/423 (7%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RS NGCRV D+IL VPN++ FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSFNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI LNKA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E D
Sbjct: 372 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD-- 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I H+
Sbjct: 430 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 488
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
RR++L + P+ ++ E V++ S L + E+ M P
Sbjct: 489 RRKELHQLL---------PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPT 539
Query: 357 KSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAH---MQLDGIVNH 413
++K ++ G G ++ VM+A + D H ++ GI
Sbjct: 540 GTMKTGPLT---------GNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSGIALS 590
Query: 414 ESV 416
ES+
Sbjct: 591 ESI 593
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 201/338 (59%), Gaps = 19/338 (5%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +DE +VRS NG RV ++IL+ VPN E FR TL +K WA+ RG+YSNV GFLGGVN
Sbjct: 6 VLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLGGVN 65
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED-ELGFSVWDPRKNPR 121
WA+LVAR+CQ YPN++P+ L+SRFFR+Y W WPNP+ML ++ LGFS W+P+ N R
Sbjct: 66 WAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVR 125
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITPAYP +NSSYNV STL V+ +F G EIE K W+ LF F
Sbjct: 126 DRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLDRTLEIETKKFSWAKLFVAPAF 185
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN--EYIDP 239
F+ K++L+V+I A A D W GWVESR R L L++E ++ ++ HP+ ++ID
Sbjct: 186 FQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLEALSD--IRIHPFARFFDFIDT 243
Query: 240 SKPCPNSA---------FFMGLR----RKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK 286
P S+ F+GL+ + VTG D+ + +F +
Sbjct: 244 KDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGAT-HSVDLTSVIRDFATYTDQWEGRH 302
Query: 287 PGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAG 324
GMD+ + HV R Q+P +V S+H + G
Sbjct: 303 GGMDMQIDHVTRSQIPEWVLESVASGADDSKHVRKHKG 340
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 202/353 (57%), Gaps = 31/353 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 184 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 244 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 303
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 304 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 363
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 364 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 423
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 424 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 475
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGR 340
GM I +HV+++QL ++ P+ ++ + DV SG +
Sbjct: 476 GMKIEATHVKKKQLHHYL---------PAEILQKKKKQSLSDVTRSSSGPQSK 519
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 229/424 (54%), Gaps = 33/424 (7%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A+ L W G VES+ R L +E++ L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ-QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRR 298
+ +GL++ E +DI+ D +R+ + MF + GM I H+RR
Sbjct: 433 EFRTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRR 491
Query: 299 RQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKS 358
++L + P ++ E ++ S L E+ M +
Sbjct: 492 KELHQLL---------PHHVLQDKKAHSPEGRRLTDLNDSSFDLSAGCENSMSVPSSTST 542
Query: 359 VKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHES--V 416
+K + S + G ++ VM+A S D A M L + +ES V
Sbjct: 543 MKTGPLIS---------SSQGRNSPALAVMTA-----SVADIQATEMSLQQVNTNESSGV 588
Query: 417 ALNE 420
ALNE
Sbjct: 589 ALNE 592
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/309 (46%), Positives = 194/309 (62%), Gaps = 20/309 (6%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A+ L W G VES+ R L +E++ L Q P P E +P
Sbjct: 373 KHYIILLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQ-------FDIRGTVDN-FREEIGMYMFWKPGMDIY 292
K + + +GL G+ E + +DI+ D +R+ + MF + GM I
Sbjct: 431 KEEFRTMWVIGL----GLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKIT 485
Query: 293 VSHVRRRQL 301
H+RR++L
Sbjct: 486 AMHLRRKEL 494
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 193/311 (62%), Gaps = 8/311 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN+E+FR+TLR +K WAKR+G+YSN+ G+LGGV
Sbjct: 176 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGV 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML-CPIEEDELGFSVWDPRKNP 120
+WA+LVAR CQLYPNAI S LV RFF V++QW WP PV+L P E + L VWDPR NP
Sbjct: 236 SWAMLVARTCQLYPNAIASTLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNP 295
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPIITPAYP NS+YNV+ S+L VM +F G R+ EI NK+ W L E
Sbjct: 296 SDRLHLMPIITPAYPQQNSTYNVTRSSLTVMKGEFIDGYRVTAEIHENKSSWLKLLETPN 355
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH----PYPNEY 236
FF YK+++ + A ++ W G VES+ R L +ER+ + +L H YP E
Sbjct: 356 FFNEYKHFIVLMASAESQENFNLWTGLVESKIRILVGYLERN-DYILIAHINQTGYPQEV 414
Query: 237 IDPSKPCPN-SAFFMGLR-RKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVS 294
+ + +F+GLR K+ ++ DI+ D + +K GM + +
Sbjct: 415 KEKDVTTAYVNRWFLGLRFVKDLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEAT 474
Query: 295 HVRRRQLPSFV 305
+ RR QLP ++
Sbjct: 475 YSRRSQLPKYL 485
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKANNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKD 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKANNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKD 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 51 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 110
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 111 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 170
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 171 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 230
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 231 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 290
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N YI S +F+G+ RR E +DI+ D + K
Sbjct: 291 HKDNNYI--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 342
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 343 GMKIEATHVKKKQLHHYL 360
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGSKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 192/305 (62%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 190 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 249
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 250 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 309
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 310 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 369
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 370 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 427
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ + MF + GM I H+
Sbjct: 428 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-ETGMKIAAMHL 486
Query: 297 RRRQL 301
RR++L
Sbjct: 487 RRKEL 491
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 191/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ + L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEEHQLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/311 (45%), Positives = 191/311 (61%), Gaps = 8/311 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ L H P + +
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKE 425
Query: 242 PCPN----SAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYVS 294
+ S +F+G+ RR E +DI+ D + K GM I +
Sbjct: 426 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 485
Query: 295 HVRRRQLPSFV 305
HV+++QL ++
Sbjct: 486 HVKKKQLHHYL 496
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 200/343 (58%), Gaps = 19/343 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 201 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 260
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L E+ L VWDPR NP
Sbjct: 261 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPS 320
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + EI K+ WS L EP F
Sbjct: 321 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNF 380
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEY 236
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ L Q P E+
Sbjct: 381 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 440
Query: 237 IDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYV 293
S S +F+G+ RR E +DI+ D + K GM I
Sbjct: 441 YKESDYV--SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 498
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSG 336
+HV+++QL ++ P+ ++ + +D+ SG
Sbjct: 499 THVKKKQLHHYL---------PAEILQKKKKQSLQDINRSASG 532
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 201/353 (56%), Gaps = 31/353 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGR 340
GM I +HV+++QL ++ P+ ++ + DV SG +
Sbjct: 479 GMKIEATHVKKKQLHHYL---------PAEILQKKKKQSLSDVNRSSSGPQSK 522
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 184 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 244 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 303
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 304 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 363
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 364 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 423
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 424 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 475
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 476 GMKIEATHVKKKQLHHYL 493
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 199/343 (58%), Gaps = 19/343 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEY 236
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ L Q P E+
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 237 IDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYV 293
+ S +F+G+ RR E +DI+ D + K GM I
Sbjct: 427 YKDNNYV--SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 484
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSG 336
+HV+++QL ++ P+ ++ + DV SG
Sbjct: 485 THVKKKQLHHYL---------PAEILQKKKKQSLSDVNRSSSG 518
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 184 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 244 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 303
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 304 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 363
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 364 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 423
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 424 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 475
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 476 GMKIEATHVKKKQLHHYL 493
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 208 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 267
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 268 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 327
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 328 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 387
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 388 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 447
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 448 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 499
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 500 GMKIEATHVKKKQLHHYL 517
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 184 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 244 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 303
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 304 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 363
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 364 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 423
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 424 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 475
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 476 GMKIEATHVKKKQLHHYL 493
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 187/306 (61%), Gaps = 8/306 (2%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + +RSLNGCRV D+IL VPN+E+FR+TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR P D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS+YNVS ST +M E+F+ G I +EI NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYI 237
+ YK+Y+ + A L W G VES+ R L +E++ L Q P P E
Sbjct: 368 QKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGN 427
Query: 238 DPSKPCPNSAFFMGLRRKEGVTGKERQ-QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSH 295
D + + ++ EG FDI+ D +R+ I MF + M I H
Sbjct: 428 DKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQ-DMKITAMH 486
Query: 296 VRRRQL 301
V+R+QL
Sbjct: 487 VKRKQL 492
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 191/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSNWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 218/392 (55%), Gaps = 25/392 (6%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 192 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWA 251
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR
Sbjct: 252 MLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 311
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+
Sbjct: 312 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 371
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDP 239
YK+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 372 YKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SP 429
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSH 295
K + + +GL K+ + +DI+ D +R+ I MF + M I H
Sbjct: 430 DKEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 488
Query: 296 VRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRP 355
++R++L + P+ ++ E V++ + R L E P
Sbjct: 489 LKRKELHQLL---------PNHVLQKKKTLSTEGVRLTALDAGSRDLSVGSESST----P 535
Query: 356 DKSVKRASISSEVPQPVSPGKTTGDSTNDSEV 387
S+ AS + VP G + G + + S V
Sbjct: 536 VSSLPAASQTGPVPGSAPGGNSRGPAASVSGV 567
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 190/300 (63%), Gaps = 10/300 (3%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
+++RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+LVAR
Sbjct: 194 RSIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAMLVAR 253
Query: 70 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPI 129
CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H MPI
Sbjct: 254 TCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPI 313
Query: 130 ITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYL 189
ITPAYP NS+YNVS+ST VM E+F+ G I EI LNKA+WS LFE FF+ YK+Y+
Sbjct: 314 ITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYI 373
Query: 190 QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI----DPSKPCPN 245
+ A L W G VES+ R L +E++ L H P ++ +P K
Sbjct: 374 VLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKEFR 432
Query: 246 SAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRRRQL 301
+ + +GL K+ + +DI+ D +R+ + MF + GM I H+RR++L
Sbjct: 433 TMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-ETGMKIAAMHLRRKEL 491
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 206/359 (57%), Gaps = 21/359 (5%)
Query: 17 GCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 76
GCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+LVAR CQLYPN
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 77 AIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPC 136
AI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H MPIITPAYP
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 137 MNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAA 196
NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ YK+Y+ + A
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 183
Query: 197 DADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPSKPCPNSAFFMG 251
L W G VES+ R L +E++ L Q P P E P + + + +G
Sbjct: 184 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPDREEFRTMWVIG 241
Query: 252 LRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFP 307
L K+ + +DI+ D +R+ I MF + M I HV+R+QL +
Sbjct: 242 LVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLL-- 298
Query: 308 DGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASISS 366
PS ++ E VK+ S L + ++ M P ++K + ++S
Sbjct: 299 -------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 350
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 135/315 (42%), Positives = 194/315 (61%), Gaps = 4/315 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN E+FR+ LR +K WAK+ VYSN G+LGGV+
Sbjct: 200 LLKNLDQKCVRSLNGCRVTDEILRLVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVS 259
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W+WP PV+L + L F VWDPR N D
Sbjct: 260 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSD 319
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVSLST +M ++ + G I E+I L K W LFE FF
Sbjct: 320 RYHLMPIITPAYPQQNSTFNVSLSTRSIMQDELKLGLSITEDIMLGKCGWEKLFETSHFF 379
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
Y++Y+ + + + +D L W G VES+ R L +ER+ + L H P+ + P +P
Sbjct: 380 SKYRHYIVLLLSSNSPEDQLEWCGLVESKIRLLVGNLERNHHINL-AHVNPDSFQQPQEP 438
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
N + +F+G+ + +DI D + WK GM + +V+R+
Sbjct: 439 DSNVLCTMWFIGVVFAKTGNLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRK 498
Query: 300 QLPSFVFPDGYKRPR 314
+L S++ P K+ +
Sbjct: 499 ELTSYLSPSVLKKEK 513
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 190/303 (62%), Gaps = 8/303 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A+ L W G VES+ R L +E++ L Q P P E D
Sbjct: 372 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 431
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ-QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRR 298
+ +GL++ + +DI+ D +R+ + MF + GM I H+RR
Sbjct: 432 EFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRR 490
Query: 299 RQL 301
++L
Sbjct: 491 KEL 493
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 190/303 (62%), Gaps = 8/303 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A+ L W G VES+ R L +E++ L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ-QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRR 298
+ +GL++ + +DI+ D +R+ + MF + GM I H+RR
Sbjct: 433 EFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRR 491
Query: 299 RQL 301
++L
Sbjct: 492 KEL 494
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 190/303 (62%), Gaps = 8/303 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A+ L W G VES+ R L +E++ L Q P P E D
Sbjct: 372 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 431
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ-QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRR 298
+ +GL++ + +DI+ D +R+ + MF + GM I H+RR
Sbjct: 432 EFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAVHLRR 490
Query: 299 RQL 301
++L
Sbjct: 491 KEL 493
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 190/303 (62%), Gaps = 8/303 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A+ L W G VES+ R L +E++ L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ-QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRR 298
+ +GL++ + +DI+ D +R+ + MF + GM I H+RR
Sbjct: 433 EFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAVHLRR 491
Query: 299 RQL 301
++L
Sbjct: 492 KEL 494
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 200/346 (57%), Gaps = 35/346 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 209 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 268
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 269 TWAMLVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 328
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +VM +F G I +EI L +A W LFE F
Sbjct: 329 DRYHLMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSF 388
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHPYPNEYI--- 237
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +P E
Sbjct: 389 FYRYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGE 448
Query: 238 -------------DPSKPCPNSA----------FFMGLRRKEGVTGKERQQFDIRGTVDN 274
D +P PN A +F+GL + E D+ ++ N
Sbjct: 449 SANNSQNNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFERS----ENLNVDLTESIQN 504
Query: 275 FREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
F E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 505 FTEHVIMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 550
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 200/346 (57%), Gaps = 35/346 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 208 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 267
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 268 TWAMLVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 327
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +VM +F G I +EI L +A W LFE F
Sbjct: 328 DRYHLMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSF 387
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHPYPNEYI--- 237
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +P E
Sbjct: 388 FYRYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGE 447
Query: 238 -------------DPSKPCPNSA----------FFMGLRRKEGVTGKERQQFDIRGTVDN 274
D +P PN A +F+GL + E D+ ++ N
Sbjct: 448 SANNSQNNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFERS----ENLNVDLTESIQN 503
Query: 275 FREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
F E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 504 FTEHVIMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 549
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 198/329 (60%), Gaps = 16/329 (4%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
+ + +GL K+ + +DI+ D +R+ + MF + GM I H+
Sbjct: 431 MEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHL 489
Query: 297 RRRQ----LPSFVFPDGYKRPRPSRHFNE 321
RR++ LP V D + SR +
Sbjct: 490 RRKELHQLLPHHVLQDKKAQATESRRLTD 518
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/318 (44%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV ++IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 427 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 478
Query: 288 GMDIYVSHVRRRQLPSFV 305
GM I +HV+++QL ++
Sbjct: 479 GMKIEATHVKKKQLHHYL 496
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/310 (45%), Positives = 189/310 (60%), Gaps = 6/310 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 244 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 303
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 304 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 363
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 364 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 423
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYPNEYID 238
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 424 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 483
Query: 239 PSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYVSH 295
S +F+G+ RR E +DI+ D + K GM I +H
Sbjct: 484 HKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATH 543
Query: 296 VRRRQLPSFV 305
V+++QL ++
Sbjct: 544 VKKKQLHHYL 553
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPE 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I H+
Sbjct: 431 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINTKMF-EMDMKIAAMHL 489
Query: 297 RRRQL 301
+R++L
Sbjct: 490 KRKEL 494
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/310 (45%), Positives = 189/310 (60%), Gaps = 6/310 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYPNEYID 238
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 239 PSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYVSH 295
S +F+G+ RR E +DI+ D + K GM I +H
Sbjct: 427 HKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATH 486
Query: 296 VRRRQLPSFV 305
V+++QL ++
Sbjct: 487 VKKKQLHHYL 496
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/310 (45%), Positives = 189/310 (60%), Gaps = 6/310 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYPNEYID 238
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 239 PSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYVSH 295
S +F+G+ RR E +DI+ D + K GM I +H
Sbjct: 427 HKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATH 486
Query: 296 VRRRQLPSFV 305
V+++QL ++
Sbjct: 487 VKKKQLHHYL 496
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
+ + +GL K+ + +DI+ D +R+ + MF + GM I H+
Sbjct: 431 MEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHL 489
Query: 297 RRRQL 301
RR++L
Sbjct: 490 RRKEL 494
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/310 (45%), Positives = 189/310 (60%), Gaps = 6/310 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYPNEYID 238
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 239 PSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYVSH 295
S +F+G+ RR E +DI+ D + K GM I +H
Sbjct: 427 HKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATH 486
Query: 296 VRRRQLPSFV 305
V+++QL ++
Sbjct: 487 VKKKQLHHYL 496
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 230/426 (53%), Gaps = 37/426 (8%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
+ + +GL K+ + +DI+ D +R+ + MF + GM I H+
Sbjct: 431 MEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHL 489
Query: 297 RRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPD 356
RR++L + P R ++ E ++ S L E+ M
Sbjct: 490 RRKELHQLL---------PHRVLQDKKAHATEGRRLTDLNDSSFDLSAGCENSMSVPSST 540
Query: 357 KSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHES- 415
++K + S + G ++ VM+A S + A + L + ES
Sbjct: 541 STMKTGPLIS---------SSQGRNSPALAVMTA-----SMANVQATEISLQQMNTSESS 586
Query: 416 -VALNE 420
VALNE
Sbjct: 587 GVALNE 592
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 196/324 (60%), Gaps = 17/324 (5%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR
Sbjct: 251 MLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRY 310
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+
Sbjct: 311 HLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQK 370
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDP 239
YK+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 371 YKHYIALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRE--SP 428
Query: 240 SKPCPNSAFFMGL---RRKEGVTGKERQQFDIRGTVDN-FREEIGMYMFWKPGMDIYVSH 295
K + + +GL R + +DI+ D +R+ + MF + M I H
Sbjct: 429 DKEEFRTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMF-EMDMKIAAMH 487
Query: 296 VRRRQ----LPSFVFPDGYKRPRP 315
+RR++ LP+ V P K P P
Sbjct: 488 LRRKELHQLLPNHVLPQK-KTPSP 510
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 214/398 (53%), Gaps = 56/398 (14%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+DE+ VRSLNG RV D IL+ VP V FR+ LRC+K WA R+ +YSNV GFLGGV WA+
Sbjct: 180 NLDERCVRSLNGSRVTDAILRLVPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWAM 239
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVARVCQLYPNA +VSRFF + QW+WP PV+L IEE L VW+P+ P DR+H
Sbjct: 240 LVARVCQLYPNACAGAIVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAH 299
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP M +++NV ST ++TE+ + G+ + E+I + A WS LF + FF+ Y
Sbjct: 300 RMPIITPAYPAMCATHNVMASTQMIITEELKKGSELVEKIIVGTADWSELFIKHDFFDKY 359
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--------- 236
+ YLQV +AD L W G VESR RQL +K+E + L HP+ +
Sbjct: 360 RYYLQVIASTGNADLQLKWSGTVESRIRQLVMKLEY-VDSLTLAHPFIKGFEQVSYCLSD 418
Query: 237 -------------------------IDPSKPCPNSAFFMGLR---RKEGVTGKERQQFDI 268
+ + + F++GL ++ G G ++ DI
Sbjct: 419 EEVRAVAQGEISETVKKRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGP--RKLDI 476
Query: 269 RGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRH--------- 318
F + + M+ F + M I V H+R LP +VF +G ++ RP +
Sbjct: 477 SYPTTEFTKLVKMWEKFDEAKMGIVVRHIRHTALPDYVFGEGGRQTRPQKRPKTSKNSGQ 536
Query: 319 -FNEQAGKPCEDVKMCQSG-----SSGRHLKREKEHEM 350
N +P + ++ +S SS RH ++ H++
Sbjct: 537 SGNTSPEQPNKKRRLVKSSFRTIRSSMRHFRQTFVHDL 574
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 243/472 (51%), Gaps = 48/472 (10%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L NVDE+++ SLNGCRVADQILK VPN+ +FRM LRC+K WA FLGG+ W
Sbjct: 217 LKNVDEKSILSLNGCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITW 267
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCP-IEEDELGFSVWDPRKNPRD 122
ALL AR+CQLYPN+ PS +++RFF+VY W+WP PV+L +E L VW+ + RD
Sbjct: 268 ALLTARICQLYPNSAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAK---RD 324
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
++H MPI+TPAYP MNS+YNVS ST++++ +F G I +IE N++ ++AL E FF
Sbjct: 325 KAHLMPILTPAYPMMNSTYNVSKSTMQLLKNEFVRGAEITRKIETNESTYNALLEKSDFF 384
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID---- 238
Y+ Y+Q+D A + +D W+GW+ES+ R L +E T + P+P + +
Sbjct: 385 TRYRFYIQIDCSAGNEEDHRKWEGWIESKLRFLISNLEM-TPKMKYAVPFPKSFSNLIHK 443
Query: 239 ---PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG----MDI 291
P + C + FFMGL T + D+ V F I ++ +P DI
Sbjct: 444 ESHPDQIC--TTFFMGLVFNFPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADI 501
Query: 292 YVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEME 351
V +++++QLPSF+ + P N++ + + S
Sbjct: 502 KVQYIKKKQLPSFI---QSEIPPAEPKVNKKRVSTGDPSTSKKKVKSTTTTTTSTNTSPS 558
Query: 352 EVRPDKSVKRASISSEVPQPVSPGKTTGDSTNDSEVMSAGGHLVSEKD------TMAAHM 405
+ P K +S ++ P+SP T N+S + S D T
Sbjct: 559 TLTP---TKESSNNTSGTNPLSPNNTISSPNNESTITSNDSTATITNDNSENLITTGGDT 615
Query: 406 QLDGIVNHESVALNEQKCTL--------VDDLSVINNESESSDLAEPSKPGL 449
VN+E+ + EQ T+ V++L I+N++ES A P KP +
Sbjct: 616 IASTTVNNET-TITEQNQTITKIVNTMEVNELDFISNQTESQPRAPPKKPNI 666
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 186/311 (59%), Gaps = 14/311 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + VRSLNGCRV D+IL VP+ E+FR+TLR +K WAK++GVYSN GFLGGV
Sbjct: 182 SLLKNLDPKCVRSLNGCRVTDEILNVVPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED-ELGFSVWDPRKNP 120
+WA+LVAR CQLYPNA S LV++FF V+T+W WP PV+L P ELGF+ WDPR N
Sbjct: 242 SWAMLVARTCQLYPNAAASTLVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNV 301
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPIITPAYP NS+YNVS ST V+ ++ Q G I +EI KA W LFE
Sbjct: 302 SDRFHLMPIITPAYPQQNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKATWEKLFESSN 361
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FF YK+Y+ + A + DD L W G VES+ R L +ER+ + L H YP I PS
Sbjct: 362 FFGKYKHYIVLIASAGNEDDHLKWVGLVESKIRVLVGNLERNPHIKL-AHVYPKS-ISPS 419
Query: 241 KPCPNSA----------FFMGLRRKE-GVTGKERQQFDIRGTVDNFREEIGMYMFWKPGM 289
P S +F+GL + G DI+ V+ + GM
Sbjct: 420 TPLDGSEEEKTDEHSTLWFIGLEFQPLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGM 479
Query: 290 DIYVSHVRRRQ 300
I HV+R +
Sbjct: 480 KIEAKHVKRYE 490
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 198/353 (56%), Gaps = 41/353 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D++ +RSL G RV D+IL+ VPNV FR +LRC+K WA+RR +YSNV GFLGGV
Sbjct: 176 NLLRNLDDRCIRSLGGSRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGV 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNAI +VSRFF + QW WP PV+L IEE L VW+P+ P
Sbjct: 236 AWAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPG 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITPAYP M +++NV+ ST +MTE+F+ G I +++ + A WS LF + F
Sbjct: 296 DRSHRMPIITPAYPAMCATHNVTASTQMIMTEEFKKGADIVDKVIVGTATWSELFAKHDF 355
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN------- 234
F Y+ YLQ+ D + W G VESR RQL +K+E L HP+
Sbjct: 356 FHKYRYYLQIIASTGDPALQIKWAGTVESRLRQLVMKLEF-VESLQLAHPFIKGFEQISY 414
Query: 235 ---------------------------EYIDPSKPCPNSAFFMGL---RRKEGVTGKERQ 264
E + + S F++GL R+ G G +
Sbjct: 415 CLSEEEMRAVAQGEVSEAVAQRKKEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGP--R 472
Query: 265 QFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
+ DI F + + + F + M I V H++ LP +VF G ++P+P+
Sbjct: 473 KLDISWPTTEFTKMVKSWDKFDETKMGIIVRHIKSSTLPDYVFDAGERQPKPA 525
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 201/353 (56%), Gaps = 43/353 (12%)
Query: 2 SVLNNVDEQTVRSL--NGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLG 59
++L N+DE+ VRSL G RV D+IL+ VPNV+ FR LRC+K WA+RR +YSNV GFLG
Sbjct: 194 NLLRNLDERCVRSLGATGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSNVNGFLG 253
Query: 60 GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKN 119
GV WALLVAR+CQLYPNAI +VSRFF + QW WP PV+L IE+ L VW+P+
Sbjct: 254 GVAWALLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLY 313
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P DRSH MPIITPAYP M S++NV+ ST +MTE+F+ G I +++ + A WS LF +
Sbjct: 314 PADRSHRMPIITPAYPAMCSTHNVTASTQIIMTEEFKRGADIVDKVIVGSATWSELFAKH 373
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN----- 234
FF Y+ YLQV +AD + W G VESR RQL +K+E + L+ HP+
Sbjct: 374 DFFHKYRYYLQVIASTGNADLQIKWSGTVESRIRQLVMKLEY-VDSLILAHPFIRGFEQV 432
Query: 235 -----------------------------EYIDPSKPCPNSAFFMGLR---RKEGVTGKE 262
E + + P ++ F++GL + G TG
Sbjct: 433 SYCLSEDEVRAVAEGEISDSVAGRKKEDIEGKEGAGPVYSTTFYIGLAIEPKPTGATGPR 492
Query: 263 RQQFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
R DI +F + + M+ + + M I V H++ LP VF G + P+
Sbjct: 493 R--LDISYPTTDFTKLVKMWEKYDEATMGIVVRHIKSSGLPDNVFEPGERPPK 543
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 187/315 (59%), Gaps = 12/315 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 234 ---NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMD 290
N Y+ P N + E V Q + I+ D + K GM
Sbjct: 427 HKDNNYVSMWFPWDNFSESRKXENAESVNIXXXQSY-IQSFTDTVYRQANNINMLKEGMK 485
Query: 291 IYVSHVRRRQLPSFV 305
I +HV+++QL ++
Sbjct: 486 IEATHVKKKQLHHYL 500
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 241/449 (53%), Gaps = 33/449 (7%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ FLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L E+ L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLRKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E D
Sbjct: 373 KHYIVLLASATTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENTDME 432
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ + MF + GM I H+
Sbjct: 433 K--FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EVGMKITAMHL 489
Query: 297 RRRQ----LPSFVFPDGYKRPRPSRH--------FNEQAGKPCEDVKMCQSGSSGRHLKR 344
RR++ LP V D R F+ AG CE+ S +S
Sbjct: 490 RRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDTSFDLSAG--CENSMSVPSSTSAVKTGP 547
Query: 345 EKEHEMEEVRPDKSVKRASI----SSEVP-QPVSPGKTTGDSTNDS--EVMSAGGHLVSE 397
P +V AS+ ++E+ Q V+ +++G + N+S +S S
Sbjct: 548 LISSSQGRNSPALAVMTASVANIQATEISLQQVNTSESSGVALNESIPHAVSQPAISPSP 607
Query: 398 KDTMAAHMQLDGIVNHESVALNEQKCTLV 426
K +A + +++H + +Q+ L+
Sbjct: 608 KAMVARVVSSTCLISHPDLQETQQQTYLI 636
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/374 (39%), Positives = 205/374 (54%), Gaps = 44/374 (11%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VP++ FR+TLR +K WAKR G+YSN G+LGGV+
Sbjct: 200 LLKNLDQKCVRSLNGCRVTDEILRLVPDINTFRLTLRAIKLWAKRHGIYSNTLGYLGGVS 259
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+P+ L+ +FF V++QW+WP PV+L P + LGF VWDPR N D
Sbjct: 260 WAMLVARTCQLYPNALPATLLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSD 319
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS ST V+ E+F+ G I +EI L K W LFE FF
Sbjct: 320 RYHLMPIITPAYPQQNSTFNVSSSTRTVIMEEFRLGLAITDEIMLGKCGWERLFEAANFF 379
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY------ 236
YK+++ + +A+ D L W G VES+ R L +ER+ + + H P Y
Sbjct: 380 SRYKHFIVLLASSANTLDQLPWCGLVESKIRHLITTLERNQH-ITIAHVNPECYNSVPLN 438
Query: 237 --------IDPSKPCPN--------------------SAFFMGLRRKEGVTGKERQQFDI 268
+ P P S +F+GL V K D+
Sbjct: 439 TNNGHPLALPPGTPVQTEEHGAAEVKNDKGEIVANVCSMWFIGL-----VFDKTNVNVDL 493
Query: 269 RGTVDNFREEIGMYM----FWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAG 324
+ +F + + + GM I HVRR+QL ++ P +R + ++ NE
Sbjct: 494 TYDISSFTKAVHYQAENTNVLREGMTIEARHVRRKQLHQYLSPSLLRREKVNKRKNETLA 553
Query: 325 KPCEDVKMCQSGSS 338
+ K S+
Sbjct: 554 VHTKKAKRVSESSA 567
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 207/370 (55%), Gaps = 43/370 (11%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+DE+++RSLNG RV ++IL+ VPNV+ FR LRC+K WA++R VYSNV GFLGGV WA+
Sbjct: 180 NLDEKSIRSLNGSRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAM 239
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVARVCQLYPNA+ +VSRFF + +W WP PV+L PIE+ L VW+P+ +DRSH
Sbjct: 240 LVARVCQLYPNAVAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSH 299
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP M +++NV ST ++M E+FQ G I +++ L KA+WSALF + FF+ Y
Sbjct: 300 RMPIITPAYPSMCATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRY 359
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--------- 236
+ YLQV + D + W G V S+ RQL +++E + L HP+ +
Sbjct: 360 RFYLQVVAASRDLEMQNKWSGTVASKIRQLVMRLEY-VDALKLAHPFIKGFDVVYYCLSE 418
Query: 237 ----------IDPSKP---------------CPNSAFFMGLR---RKEGVTGKERQQFDI 268
I P+ ++FF+GL ++ G TG R DI
Sbjct: 419 EEAQVVTRGEIPPAVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRR--LDI 476
Query: 269 RGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRP--RPSRHFNEQAGK 325
F + M+ + + M I V H++ LP FVF G + RP++
Sbjct: 477 SYPTTEFVKMTKMWEKYDESAMHIAVRHIKHTVLPDFVFEPGEREAASRPTKRSRSIKDS 536
Query: 326 PCEDVKMCQS 335
P K ++
Sbjct: 537 PAPATKRSRT 546
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 202/326 (61%), Gaps = 12/326 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + VRSLNGCRV D+IL VPN+ +FRMTLR +K WAK + VYSNV GFLGGV+WA+
Sbjct: 27 NLDARCVRSLNGCRVTDEILHLVPNIANFRMTLRAIKLWAKNQFVYSNVLGFLGGVSWAM 86
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPI-EEDELGFSVWDPRKNPRDRS 124
LVAR+CQLYPNAI + LV +FF +Y++W WP PV+L + E++L F +WDPR NP DR
Sbjct: 87 LVARICQLYPNAIAATLVQKFFLIYSKWAWPQPVLLKQMPTENKLNFPIWDPRMNPADRF 146
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP NS++NVS+S+ VM + F+ G ++ EEI + W ALF P FF+
Sbjct: 147 HLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRGFQVMEEIYSKTSTWKALFAPANFFQK 206
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP---SK 241
YK+Y+ + + ++ L W+G VES+ R L + +ER+ L H P Y DP S+
Sbjct: 207 YKHYIVLSAYSNSSEHHLEWEGLVESKIRILIVNLERNQFVKL-AHVNPKSY-DPILKSE 264
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIG----MYMFWKPGMDIYVSHVR 297
S +F+GL ++ G + + DI + F + ++ GM HV+
Sbjct: 265 SGTVSRWFIGLEFQKP-EGTKNVKVDITAEIQYFTSTVHKQACQIAIFREGMRTEARHVK 323
Query: 298 RRQLPSFVFPDGYKRPRPSRHFNEQA 323
++QL +++ P+ R + N Q
Sbjct: 324 KKQLSNYL-PNTVLRLKKKSSLNGQV 348
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 190/305 (62%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR +P DR H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I EI L+KA+WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E P
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--SPD 430
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I MF + M I H+
Sbjct: 431 KEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 489
Query: 297 RRRQL 301
+R++L
Sbjct: 490 KRKEL 494
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 191/314 (60%), Gaps = 20/314 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L + D++T RSLNG RVADQILK VPN E+FR TLRC+K WA RR +Y N+ G+LGGV
Sbjct: 169 SNLKDADDETQRSLNGPRVADQILKLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGV 228
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEEDELGFSVWDPRKNP 120
+A+L A++CQ+YPNA PS L+++FF VY QW W PV+L PIEE L F VW+P+ NP
Sbjct: 229 AYAILTAKICQMYPNAAPSTLLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNP 288
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
RD+ H MPIITP+YPCMNS++NVS +TL+ M +F+ G I ++ E W LFE
Sbjct: 289 RDKQHLMPIITPSYPCMNSTFNVSKTTLKDMKNEFERGASITQKAENGLENWETLFEATD 348
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FF Y NYLQV+I ++ D L W G+++S+ R L K+E L H YP+ + +
Sbjct: 349 FFVRYSNYLQVEINTSNEVDHLKWIGFIQSKVRFLIPKLEAVPG--LTIHIYPDYFHNNQ 406
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFW--------KPGMDIY 292
+S F++GL K+ G E ++ + F E + W KP
Sbjct: 407 GGAFSSYFYIGLEYKQTKPG-EGSVVNLASCIAEFEE----LLTWPDKNENMEKPK---- 457
Query: 293 VSHVRRRQLPSFVF 306
+ ++R +P FV
Sbjct: 458 IQPIKRNAIPEFVI 471
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/307 (45%), Positives = 190/307 (61%), Gaps = 17/307 (5%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+++L N+D + VRSLNGCRV D+IL VPN E FR++LR +K WAK+ GVYSNV G+LGG
Sbjct: 194 VNILKNLDPKCVRSLNGCRVTDEILHLVPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGG 253
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
V+WA+LVAR CQLYPNA + LV +FF V++QW WP PV+L EE++LGF VWDPR N
Sbjct: 254 VSWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINV 313
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPIITPAYP NS++NVS+ST +M ++F+ G I +EI L + +W LFEP
Sbjct: 314 ADRFHLMPIITPAYPQQNSTFNVSVSTRTIMRQEFKQGLAITDEIMLGRTEWIKLFEPPN 373
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN-EYIDP 239
FF YK+++ + + L W G VES+ R L +ER HPY +++P
Sbjct: 374 FFGKYKHFIVLMATTMTKEHHLEWYGLVESKIRILISNLER--------HPYIEIAHVNP 425
Query: 240 SK--PCP------NSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDI 291
PC S +F+GL+ + +DIR VD + + K M++
Sbjct: 426 ESFPPCEPDGDKLQSMWFIGLQFSKTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEV 485
Query: 292 YVSHVRR 298
+ +VRR
Sbjct: 486 DIKYVRR 492
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 197/346 (56%), Gaps = 35/346 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAKR G+YSN G+ GGV
Sbjct: 196 NLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKRHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L ++ L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNAS 315
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVGWDRLFEAPSF 375
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-QCHPYPNEYIDPS 240
F Y++++ + + + ADD L W G VES+ R L +ER + +L +P E +
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERIPHIVLAHVNPKCFELKKGA 435
Query: 241 KPCPNSA--------------------------FFMGLRRKEGVTGKERQQFDIRGTVDN 274
NS +F+GL + E D+ ++ N
Sbjct: 436 ATANNSQNNSGNEDDLKQQSAQAAVTTAPYCSLWFIGLEFERS----ENLNIDLTESIQN 491
Query: 275 FREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
F E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 492 FTEHVNMHGVNIKMLKEGMSIVARHVKRKQLSVYLDADFLKRERKS 537
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 201/317 (63%), Gaps = 9/317 (2%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N++ + VRSLNGCRV D IL+ VPN E F+ TL +K WAKR VYSN G+LGGV+
Sbjct: 171 LLRNLNPKCVRSLNGCRVTDSILRLVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVS 230
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYPNA P+ L+ +FF ++++W+WP PV+L P +LG+ VWDPR N D
Sbjct: 231 WAMLVARVCQLYPNAAPATLIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMAD 290
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R+H MPIITP YP NS++NVS STL ++ ++F+ I EI ++ WS +F+P FF
Sbjct: 291 RNHVMPIITPVYPQQNSTFNVSHSTLAIIQDEFKTSLDIMGEILTGESSWSKIFQPSKFF 350
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI---DP 239
Y+ +L + + A ++LL W+G VESR R L +E + + + H P++++ D
Sbjct: 351 TKYRYFLAITVFANCDEELLEWRGLVESRLRFLPTSLE-EIECVQRSHLNPDQFVLPYDK 409
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIG--MYMFWKPGMDIYVSHVR 297
S+ P+S +F+GL + + D + +F + + +K GMDI V+H++
Sbjct: 410 SQGRPSSVWFVGLEISK--SNGTVVNLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLK 467
Query: 298 RRQLPSFVFPDGYKRPR 314
R+ L +V PD K+ +
Sbjct: 468 RKDLRDYV-PDELKKEK 483
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 197/336 (58%), Gaps = 13/336 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N D TVRS+NG RVA+ IL+ VP+ ++FRM LR +K WA RGVYSN GFLGG+
Sbjct: 236 AILRNCDMATVRSVNGSRVANYILQLVPDRDNFRMALRAIKLWANNRGVYSNKLGFLGGI 295
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-LGFSVWDPRKNP 120
WA+LVAR CQLYP + S +V+RFFRV+ W WP PV L +EED L W+P N
Sbjct: 296 AWAILVARTCQLYPKSSASTIVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINA 355
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
D H MPIITPAYP MNS++NVS+STLRVMTE+F G ++ +IE+ K W LFE
Sbjct: 356 SDARHLMPIITPAYPSMNSTHNVSMSTLRVMTEEFARGMQVTLDIEVGKVGWPVLFEKNN 415
Query: 181 FFEAYKNYLQVDI-VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--- 236
FF YK Y+Q+ + D+ W+G+VES+ R +E G+ HPYP +
Sbjct: 416 FFTRYKTYIQISARTEENQDEHRQWEGFVESKLRMFLQWLE-SAPGVDYVHPYPKTFSQT 474
Query: 237 --IDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI---GMYMFWKPGMDI 291
+ +P + F+ G+ K+ G + + ++ V +FRE I P +D+
Sbjct: 475 DTTESGQPVYLTIFYFGMMFKKQ-EGTDPRVIELGNIVRDFREAIKNQNASFVNNPRVDL 533
Query: 292 YVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPC 327
V ++R QLP VF +G RP P++ + P
Sbjct: 534 VVLPMKRPQLPENVF-EGGVRPAPTKRPKKDKNAPA 568
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 196/349 (56%), Gaps = 40/349 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSL G R ++IL+ VPNV+ FR LRC+K WA+RR +YSNV GFLGGV
Sbjct: 180 NLLRNLDERCVRSLGGSRQVNEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WALLVAR+CQLYPNA+ +VSRFF + QW WP PV+L IE+ L VW+P+ P
Sbjct: 240 AWALLVARICQLYPNALAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPA 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP M S++NV+ ST +MTE+F+ G I + + + AQWS LF + F
Sbjct: 300 DRAHRMPIITPAYPSMCSTHNVTASTQMIMTEEFKRGADIVDRVIVGTAQWSELFAKHDF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F Y+ YLQ+ D D W G VESR RQL +K+E L+ HP+ + D
Sbjct: 360 FHKYRYYLQIIASTGDPDLQNKWSGTVESRIRQLVMKLEY-VESLILAHPFIKGF-DQVS 417
Query: 242 PCPN----SAFFMG-------LRRKEGVTGKERQQ------------------------- 265
C N A G R+KE + GKE Q
Sbjct: 418 YCLNEDEVKAVVQGEISEAIASRKKEDIEGKEGSQTVYTTTFYIGLAIQPKPAGAVGPRR 477
Query: 266 FDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRP 313
DI +F + + M+ + + M I V H++ LP VF G +RP
Sbjct: 478 LDISYPTQDFSKLVKMWDKYDESKMGIIVRHIKSSALPDNVFDPG-ERP 525
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 186/303 (61%), Gaps = 8/303 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GF GGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAM 252
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNA+ S LV ++F V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 253 LVARTCQLYPNAVASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E F+ G I EI L KA WS LFE FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKY 372
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A+ L W G VES+ R L +E++ L Q P P E D
Sbjct: 373 KHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDME 432
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ-QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRR 298
+ +GL++ + +DI+ D +R+ + MF + GM I H+RR
Sbjct: 433 EFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRR 491
Query: 299 RQL 301
++L
Sbjct: 492 KEL 494
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 221/408 (54%), Gaps = 51/408 (12%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+DE+ +RSL G RV D +L+ VP+V+ FR +LRC+K WA+RR +YSNV GFLGGV WA+
Sbjct: 182 NMDERCIRSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAM 241
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR+CQLYPNA +VSRFF + QW WP PV+L IE+ L VW+P+ P DRSH
Sbjct: 242 LVARICQLYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSH 301
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP M +++NV+ ST +MTE+F+ G I +++ + A WS LF + FF Y
Sbjct: 302 RMPIITPAYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKY 361
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPN 245
+ YLQV ++D + W G VESR RQL +K+E L HP+ + D C N
Sbjct: 362 RYYLQVIASTGNSDLQIKWAGTVESRIRQLIMKLEY-VESLTLAHPFIKGF-DQVAYCLN 419
Query: 246 -----------SAFFMGLRRKEGVTGKER-------------------------QQFDIR 269
++ + R+KE V GKE ++ DI
Sbjct: 420 EEEVRAIAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDIS 479
Query: 270 GTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCE 328
F +++ ++ + + M + V H+R LP +VF G + P+ ++ + GK
Sbjct: 480 YPTIEFTKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQKRTKGPGK--- 536
Query: 329 DVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASISSEVPQ---PVS 373
+ ++ + +++ + V D S+K+A P PVS
Sbjct: 537 ------THNTSPDMPNKRQRSSQSVTTDLSLKQAENGHAAPANRVPVS 578
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 197/336 (58%), Gaps = 19/336 (5%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE +VRS NG RV ++IL+ VPN E FR TL +K WA+ RG+YSNV GFLGGVNW
Sbjct: 7 LRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFLGGVNW 66
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED-ELGFSVWDPRKNPRD 122
A+LVAR+CQ YPN++P+ L+SRFFR+Y W WPNP+ML ++ LGFS W+P+ N RD
Sbjct: 67 AILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVRD 126
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
RSH MPIITPAYP +NSSYNV STL ++ +F G EIE K+ W+ LF +FF
Sbjct: 127 RSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLFIAPVFF 186
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN--EYIDPS 240
+ K++L+V I A +A+D W GWVESR R L L++E L+ HP+ ++ +
Sbjct: 187 QRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLEALPE--LRIHPFARFFDFGETK 244
Query: 241 KPCP---------NSAFFMGLRRKE----GVTGKERQQFDIRGTVDNFREEIGMYMFWKP 287
P S F+GL TG D+ + +F +
Sbjct: 245 GATPEGSSKREVHTSWLFIGLGFPAPNPVAATGGT-HDVDLTSVIRDFAFYTDQWEARHG 303
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQA 323
GMD+ + HV R Q+P +V S+H +++
Sbjct: 304 GMDMQIDHVTRSQIPEWVLESVVNGASDSKHLRKRS 339
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 202/357 (56%), Gaps = 39/357 (10%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+DE+ +RSL G RV D +L+ VP+V+ FR +LRC+K WA+RR +YSNV GFLGGV WA+
Sbjct: 182 NMDERCIRSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAM 241
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR+CQLYPNA +VSRFF + QW WP PV+L IE+ L VW+P+ P DRSH
Sbjct: 242 LVARICQLYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSH 301
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP M +++NV+ ST +MTE+F+ G I +++ + A WS LF + FF Y
Sbjct: 302 RMPIITPAYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKY 361
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPN 245
+ YLQV ++D + W G VESR RQL +K+E L HP+ + D C N
Sbjct: 362 RYYLQVIASTGNSDLQIKWAGTVESRIRQLIMKLEY-VESLTLAHPFIKGF-DQVAYCLN 419
Query: 246 -----------SAFFMGLRRKEGVTGKER-------------------------QQFDIR 269
++ + R+KE V GKE ++ DI
Sbjct: 420 EEEVRAIAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDIS 479
Query: 270 GTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGK 325
F +++ ++ + + M + V H+R LP +VF G + P+ ++ + GK
Sbjct: 480 YPTIEFTKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQKRTKGPGK 536
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 195/324 (60%), Gaps = 15/324 (4%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L+ +D+ V+SL GCRVAD +LK V N +R+ LR L+ WA RRGVYSNV GF GGVN
Sbjct: 187 ILHGLDDAGVKSLAGCRVADSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVN 246
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIE---EDEL-GFSVWDPRK 118
A+LVARVCQLYPNA SMLV FF+++ W W PVML ++ +D++ G WD R
Sbjct: 247 LAILVARVCQLYPNASASMLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERV 306
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
N +R M IITPAYP NS++NVS STL V+ +F+ G + ++ + +A+W+ ++
Sbjct: 307 NKPERYQLMKIITPAYPAQNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEAKWTDVWSD 366
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
FF YK YLQ+ + A + +D W+GWV SR + L +E + G + HP ++ D
Sbjct: 367 VQFFAKYKTYLQLIVTADNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYD 426
Query: 239 PSKPCP-NSAFFMGLRRKEGVT---GKERQQFDIRGTVDNFREEIGMYM-------FWKP 287
P K + F GL T +E+++ ++ ++NF+ +G Y+ WKP
Sbjct: 427 PEKDKEVHCNVFFGLFPNPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKP 486
Query: 288 GMDIYVSHVRRRQLPSFVFPDGYK 311
GM + + +R++ +PS+ P+G K
Sbjct: 487 GMGVQIKLLRKKDIPSWALPEGGK 510
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/301 (46%), Positives = 182/301 (60%), Gaps = 6/301 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYPNEYID 238
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +P
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 426
Query: 239 PSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYVSH 295
S +F+G+ RR E +DI+ D + K GM I +H
Sbjct: 427 HKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATH 486
Query: 296 V 296
V
Sbjct: 487 V 487
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 194/320 (60%), Gaps = 9/320 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E+F++TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 324 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGV 383
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQL+PNA+ S LV++FF ++++W WPNPV+L EE+ L VWDPR NP
Sbjct: 384 SWAMLVARTCQLHPNALASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPS 443
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST V+ E+ + G + EI K+ W LFE F
Sbjct: 444 DRYHVMPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGKSDWPKLFEQPNF 503
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ YK+Y+ + + L W G VES+ R L +ER+ + H P + +
Sbjct: 504 FQKYKHYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERN-EFINIAHVNPQSFPGNQE 562
Query: 242 PCPNSAF----FMGL--RRKEGV-TGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVS 294
C S + F+G+ R+ E + K +DI+ D + K GM I +
Sbjct: 563 HCKQSRYVSMWFLGIIFRKLENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETA 622
Query: 295 HVRRRQLPSFVFPDGYKRPR 314
+V+R+ L F+ P G + R
Sbjct: 623 YVKRKHLHYFL-PAGTLQKR 641
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 199/348 (57%), Gaps = 39/348 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYP--- 233
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +C +
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 234 --------------------NEYIDPSKP-CPNSAFFMGLRRKEGVTGKERQQFDIRGTV 272
N+ S P C S +F+GL + E D+ ++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC--SMWFIGLEFERS----ENLNVDLTESI 489
Query: 273 DNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 490 QNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 537
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 198/349 (56%), Gaps = 41/349 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 198 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 257
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 258 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 317
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 318 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRISWERLFEAPSF 377
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-------- 233
F Y++++ + + + ADD L W G VES+ R L +ER+ + L H P
Sbjct: 378 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFRKG 436
Query: 234 ---------------------NEYIDPSKP-CPNSAFFMGLRRKEGVTGKERQQFDIRGT 271
N+ S P C S +F+GL + E D+ +
Sbjct: 437 QSANNSQNNSGNEDDLKQSQGNQSAVTSAPFC--SMWFIGLEFERS----ENLNVDLTES 490
Query: 272 VDNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
+ NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 491 IQNFTEHVTMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 539
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 199/348 (57%), Gaps = 39/348 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYP--- 233
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +C +
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 234 --------------------NEYIDPSKP-CPNSAFFMGLRRKEGVTGKERQQFDIRGTV 272
N+ S P C S +F+GL + E D+ ++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC--SMWFIGLEFERS----ENLNVDLTESI 489
Query: 273 DNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 490 QNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 537
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 199/343 (58%), Gaps = 29/343 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHPYPNEYIDPS 240
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +P E+
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEF-KKG 434
Query: 241 KPCPNSAFFMG----LRRKEG----VTG---------------KERQQFDIRGTVDNFRE 277
+ NS G L++ +G VT E D+ ++ NF E
Sbjct: 435 QSANNSQNNSGNEDDLKQSQGSQSAVTSAPFCSMWFIGLEFERSENLNVDLTESIQNFTE 494
Query: 278 EIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
+ M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 495 HVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 537
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 193/320 (60%), Gaps = 9/320 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E+F++TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQL+PNA+ S LV +FF ++++W WPNPV+L EE+ L VWDPR NP
Sbjct: 246 SWAMLVARTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPS 305
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST V+ E+ + G + EI ++ W LFE F
Sbjct: 306 DRYHVMPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNF 365
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ YK+Y+ + + L W G VES+ R L +ER+ + H P + +
Sbjct: 366 FQKYKHYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERN-EFINIAHVNPQSFPGNQE 424
Query: 242 PCPNSAF----FMGL--RRKEGV-TGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVS 294
C S + F+G+ R+ E + K +DI+ D + K GM I +
Sbjct: 425 HCKQSRYVSMWFLGIIFRKLESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETA 484
Query: 295 HVRRRQLPSFVFPDGYKRPR 314
+V+R+ L F+ P G + R
Sbjct: 485 YVKRKHLHYFL-PAGTLQKR 503
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 199/348 (57%), Gaps = 39/348 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYP--- 233
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +C +
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 234 --------------------NEYIDPSKP-CPNSAFFMGLRRKEGVTGKERQQFDIRGTV 272
N+ S P C S +F+GL + E D+ ++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC--SMWFIGLEFERS----ENLNVDLTESI 489
Query: 273 DNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 490 QNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 537
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 196/347 (56%), Gaps = 37/347 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 197 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 256
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 257 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 316
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 317 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWDRLFEAPSF 376
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F Y++++ + + + ADD L W G VES+ R L +ER+ + L H P +
Sbjct: 377 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKG 435
Query: 242 PCPNSA----------------------------FFMGLRRKEGVTGKERQQFDIRGTVD 273
NS+ +F+GL + E D+ ++
Sbjct: 436 QSANSSQNNSGNEDDLKQSQGSQSSVTSAPFCSMWFIGLEFERS----ENLNVDLTESIQ 491
Query: 274 NFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 492 NFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRERKS 538
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/287 (48%), Positives = 180/287 (62%), Gaps = 9/287 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKY 368
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPN 245
K+Y+ + A L W G VES+ R L +E++ L H P + PS+
Sbjct: 369 KHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPSENTEK 427
Query: 246 SAF----FMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMF 284
F +GL K+ + +DI+ D +R+ I MF
Sbjct: 428 EEFRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMF 474
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 199/348 (57%), Gaps = 39/348 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYP--- 233
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +C +
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 234 --------------------NEYIDPSKP-CPNSAFFMGLRRKEGVTGKERQQFDIRGTV 272
N+ S P C S +F+GL + E D+ ++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC--SMWFIGLEFERS----ENLNVDLTESI 489
Query: 273 DNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 490 QNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 537
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 204/364 (56%), Gaps = 59/364 (16%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRR-------------- 48
+L N+D+++VRSLNGCRV D+IL+ VPN+++FR+ LR +K WAKR+
Sbjct: 219 LLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKLLPHGLISPEGMCD 278
Query: 49 ------------------GVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVY 90
G+YSN G+ GGV+WA+LVAR CQLYPNA+ + LV +FF V+
Sbjct: 279 ERCFNVRVAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVAATLVHKFFLVF 338
Query: 91 TQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRV 150
++W+WP PV+L + LGF VWDPR N +DR H MPIITPAYP NS++NVS ST +V
Sbjct: 339 SRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTFNVSSSTRKV 398
Query: 151 MTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVES 210
M +F G +I ++I + K W LFE FF Y++++ + + +++ADD L W G VES
Sbjct: 399 MLMEFNRGMQITDDIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSSNADDHLEWCGLVES 458
Query: 211 RFRQLTLKIERDTNGLLQCHPYPNEYID--------------------PSKPCPNSAFFM 250
+ R L +ER+ + L H P Y P+ C S +F+
Sbjct: 459 KIRYLIQNLERNQHINL-AHVNPKCYEQHEQNPAATLNAGGGADANQTPAAFC--SLWFI 515
Query: 251 GLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGY 310
GL + E D+ ++ +F + + + K GM I HVRR+QL S++ +
Sbjct: 516 GLEFER----TENLNVDLTESIQSFTDSVHKHALLKDGMKIEARHVRRKQLASYLDANLL 571
Query: 311 KRPR 314
KR R
Sbjct: 572 KRER 575
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 199/348 (57%), Gaps = 39/348 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 256 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 315
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 316 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSF 375
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYP--- 233
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +C +
Sbjct: 376 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQ 435
Query: 234 --------------------NEYIDPSKP-CPNSAFFMGLRRKEGVTGKERQQFDIRGTV 272
N+ S P C S +F+GL + E D+ ++
Sbjct: 436 SANNSQNNSGNEDDLKQSQGNQSAVTSAPFC--SMWFIGLEFERS----ENLNVDLTESI 489
Query: 273 DNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 490 QNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 537
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 157/231 (67%), Gaps = 1/231 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSL G RV D+IL VPNV FR+ LRC+K WA RR +YSNV GFLGGV
Sbjct: 176 NLLKNLDERDVRSLGGSRVTDEILHLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGV 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPN + +VSRFF + QW+WP PV+L IE+ L VW+PR P
Sbjct: 236 AWAMLVARICQLYPNEVAGAIVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPT 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP M +++NV+ ST VMTE+F+ G+ + + I K W+ LFE F
Sbjct: 296 DRLHRMPIITPAYPSMCATHNVTQSTQMVMTEEFRRGSEVVDRIFRGKTSWNELFEKNDF 355
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YLQV + AD L W+G VESR RQL +K+E LL HP+
Sbjct: 356 FHKYKYYLQVIASSGSADLQLKWQGTVESRLRQLIMKLEL-VPALLCAHPF 405
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 188/308 (61%), Gaps = 24/308 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D+ TV+SLNGCRV +IL+ VP +E+FR TLRC+KFWAKRRG+YS++ GFLGG++
Sbjct: 211 LLENLDDTTVKSLNGCRVTARILQLVPKIENFRSTLRCIKFWAKRRGIYSHIFGFLGGIH 270
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQ++PNA SMLVSRFF +Y W+WP PV L + D S D
Sbjct: 271 WAVLVARVCQMFPNATVSMLVSRFFWIYAHWQWPTPVTLVETQPDHADGS---------D 321
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIEL------NKAQWSALF 176
R HHMPII P +P SYNV+ STL+ + +F G ++E N W+ LF
Sbjct: 322 RHHHMPIIIPVHPYSCCSYNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILF 381
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
E + F +Y+ ++Q+ + A+D DD +W+GWVESRFR L LK E+ C P P Y
Sbjct: 382 ERFPFCSSYEYFIQIYVTASDEDDFRSWRGWVESRFRHLLLKFEKLPA---YCDPNPYPY 438
Query: 237 IDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHV 296
D + P+ F GL+ ++ ++ D+ D FR + +PG D++++ +
Sbjct: 439 FDKNVKEPHCYFLWGLKLRKNIS------VDMADLEDEFRLYLSNGYEGRPGCDVHLTLL 492
Query: 297 RRRQLPSF 304
R QLPSF
Sbjct: 493 NRFQLPSF 500
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 199/350 (56%), Gaps = 40/350 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 207 NLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 266
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 267 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNAS 326
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 327 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVSWDRLFEAPSF 386
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----- 236
F Y++++ + + + ADD L W G VES+ R L +ER+ + +L H P +
Sbjct: 387 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIVL-AHVNPKCFELKKG 445
Query: 237 ---------------------IDPSKPCPNSA-----FFMGLRRKEGVTGKERQQFDIRG 270
P++ +A +F+GL + E D+
Sbjct: 446 AASANNSQNNSGNEEDLKQQQQQPAQTAVTTAPFCSLWFIGLEFERS----ENLNIDLTE 501
Query: 271 TVDNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
++ NF E + M+ K GM I H++R+QL ++ D KR R S
Sbjct: 502 SIQNFTEHVIMHGLNIKMLKEGMAIDARHLKRKQLSLYLDADFLKRERKS 551
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 180/302 (59%), Gaps = 22/302 (7%)
Query: 18 CRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 77
CRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR CQLYPNA
Sbjct: 167 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 226
Query: 78 IPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCM 137
S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H MPIITPAYP
Sbjct: 227 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 286
Query: 138 NSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAAD 197
NS+YNVS ST VM E+F+ G + +EI K+ WS L EP FF+ Y++Y+ + A+
Sbjct: 287 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 346
Query: 198 ADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP--------NEYIDPSKPCPNS 246
++ L W G VES+ R L +ER+ T + +P N Y+ S
Sbjct: 347 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------S 398
Query: 247 AFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPS 303
+F+G+ RR E +DI+ D + K GM I +HV+++QL
Sbjct: 399 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 458
Query: 304 FV 305
++
Sbjct: 459 YL 460
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 196/356 (55%), Gaps = 45/356 (12%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 194 NLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGV 253
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 254 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNAS 313
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 314 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVNWDRLFEAPSF 373
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEY 236
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +C
Sbjct: 374 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFELKKGA 433
Query: 237 IDPSKPCPNSA--------------------------------FFMGLRRKEGVTGKERQ 264
+ + NS +F+GL + E
Sbjct: 434 VTANNSQNNSGNEDDLKQQQQQQQQQKDEKPATSTVAAPFCSLWFIGLEFERS----ENL 489
Query: 265 QFDIRGTVDNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
D+ ++ NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 490 NIDLTESIQNFTEHVIMHGVNIKMLKEGMAIDARHVKRKQLSVYLDADFLKRERKS 545
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 156/221 (70%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD 222
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERN 407
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 156/221 (70%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 187 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 247 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD 222
F+ Y++Y+ + A+ ++ L W G VES+ R L +ER+
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERN 407
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 195/350 (55%), Gaps = 41/350 (11%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE+ VRSL G R+ D+IL+ VPN FR LRC+K WA+RR +YSNV GFLGGV
Sbjct: 180 ILRNLDERCVRSLGGSRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVA 239
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR+CQLYPNA ++VSRFF + +W+WPNPV+L IEE L VW+P+ P D
Sbjct: 240 WAMLVARICQLYPNANAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSD 299
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R+H MPIITP YP M S++NVS ST ++ + + + I + I + A WS LF + FF
Sbjct: 300 RAHRMPIITPNYPSMCSTHNVSQSTQMIIKHELRRASEIVDRIIMGSATWSELFAKHDFF 359
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY-----PNEYI 237
Y+ YLQV +AD L W G VESR RQL +K+E + L+ HP+ Y+
Sbjct: 360 HKYRYYLQVIASTENADLQLKWAGTVESRLRQLVMKLEY-VDSLVLAHPFIKGFDQTHYL 418
Query: 238 -----------------------------DPSKPCPNSAFFMGLR---RKEGVTGKERQQ 265
D ++ + F++GL ++ G G ++
Sbjct: 419 LTEEEVRFVAQGFVSDVISKRTKEDIEGKDGAQIVYTTTFYIGLAIEPKQPGAVGP--RK 476
Query: 266 FDIRGTVDNFREEIGMYM-FWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
DI F + + M+ F M I V H++ LP +VF ++P+
Sbjct: 477 LDISYPTAEFTKLVKMWENFDDSKMGIVVRHIKSTMLPDYVFDPSERQPK 526
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 193/347 (55%), Gaps = 38/347 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE+ VRSLNG RV DQIL+ VPN+ FR +LR +K+WAKRR VY+NV GF GGV
Sbjct: 175 NLLKQLDERDVRSLNGSRVTDQILRLVPNIPVFRDSLRAIKYWAKRRAVYANVVGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR+CQLYPN P ++SRFF ++ W+WP PV+L P+++ L VW+P N
Sbjct: 235 SWAMLVARICQLYPNECPGGILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSA 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M S++N+S S++ V+ +++ G I I + + W+ LFEP F
Sbjct: 295 DRMHKMPVITPAYPSMCSTHNISHSSMAVIKAEWERGENIVNRIAVGQTTWAELFEPTDF 354
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----- 236
F Y+ YLQ+ + D D+ L W G VES+ R L +E G+ H Y +E+
Sbjct: 355 FYKYRYYLQITASSQDMDNQLKWSGTVESKLRTLGANLE-GAEGVTLAHIYVDEFEKTYS 413
Query: 237 -----------------------------IDPSKPCPNSAFFMGLRRKEGVTGKERQQFD 267
++ + S F++GL G G ++ D
Sbjct: 414 CKTEEEVKLVASGASTPEISARTEDDIKDVEGAVKLHTSNFYIGLSIDLGPKGSGSKKLD 473
Query: 268 IRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
+ F + + + + P M I V +++ LP FVF D RPR
Sbjct: 474 LSYPTCEFTKLVKRWEKYTPEMGITVRYMKNIALPDFVFGD---RPR 517
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 198/357 (55%), Gaps = 48/357 (13%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 208 NLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 267
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N
Sbjct: 268 TWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNAS 327
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE F
Sbjct: 328 DRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRVPWERLFEAPSF 387
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN-GLLQCHPYPNEY---- 236
F Y++++ + + + ADD L W G VES+ R L +ER+ + L +P E+
Sbjct: 388 FYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNAHIALAHVNPKCFEFKKGQ 447
Query: 237 ---------------------------------IDPSKPCPNSAFFMGLRRKEGVTGKER 263
+ S C S +F+GL + +
Sbjct: 448 SANSSQNNSGNEDDPKQTQQQQTNNQANAAASTVTSSPFC--SMWFIGLEFERS----DN 501
Query: 264 QQFDIRGTVDNFREEIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
D+ ++ NF E + M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 502 LNIDLTESIQNFTEHVIMHGVNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRERKS 558
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 155/219 (70%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D+ +V+SLNGCRVADQ+L+ VPN + FR+ LR L+ WAK RGVYSNV G+ GGV
Sbjct: 163 TILQNLDDASVKSLNGCRVADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGV 222
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N ALLVARVCQLYPNA PSMLV FF+++ W+W PVML PI ++ G VWD R N
Sbjct: 223 NLALLVARVCQLYPNAAPSMLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKA 282
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
+R M IITPAYP NS++NV+ STL V+ +F+ G +C E+ ++K +W +L+EP F
Sbjct: 283 ERFQLMKIITPAYPAQNSTFNVTHSTLHVLKNEFKRGREVCAEVLMSKKRWESLWEPLPF 342
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
F +K+YLQV I A DD W+GWV SR R L +E
Sbjct: 343 FTMHKHYLQVTIAAVSEDDFKKWEGWVHSRLRMLVQGVE 381
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 195/343 (56%), Gaps = 39/343 (11%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV WA+L
Sbjct: 1 LDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAML 60
Query: 67 VARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHH 126
VAR CQLYPNA + LV +FF V+++W+WPNPV+L + L F VWDPR N DR H
Sbjct: 61 VARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHP 120
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYK 186
MPIITPAYP NS++NVS ST +V+ +F G I +EI L + W LFE FF Y+
Sbjct: 121 MPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYR 180
Query: 187 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYP-------- 233
+++ + + + ADD L W G VES+ R L +ER+ + L +C +
Sbjct: 181 HFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNS 240
Query: 234 ---------------NEYIDPSKP-CPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFRE 277
N+ S P C S +F+GL + E D+ ++ NF E
Sbjct: 241 QNNSGNEDDLKQSQGNQSAVTSAPFC--SMWFIGLEFERS----ENLNVDLTESIQNFTE 294
Query: 278 EIGMY----MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
+ M+ K GM I HV+R+QL ++ D KR R S
Sbjct: 295 HVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 337
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 189/306 (61%), Gaps = 18/306 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN+E FRMTLR +K WAK++G+YSN GFLGGV
Sbjct: 187 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLGGV 246
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPI-EEDELGFSVWDPRKNP 120
+WA+LVAR CQLYP+A P+ L+ +FF ++++W WP PV+L + +E++L +VWDPR N
Sbjct: 247 SWAMLVARTCQLYPHACPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNV 306
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPIITPAYP NS+YNVS ST ++M ++F+ + + NK +W +LF+P
Sbjct: 307 SDRFHLMPIITPAYPQQNSTYNVSNSTRQIMMDEFKEALVVANNVYANKDEWGSLFQPSD 366
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-NEYIDP 239
FF+ YK+Y+ + + D L W G VES+ R L G L+ +P+ +++P
Sbjct: 367 FFQKYKHYIVLVARSDTEDHQLEWVGLVESKIRILV--------GNLEKNPFICIAHVNP 418
Query: 240 SKPCPN--------SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDI 291
PN + +F+GL K G +DI+ +D + K GM++
Sbjct: 419 KSFGPNEDDESPYIAKWFVGLIFKTGTQTNIDLTYDIQNFMDIVYRQALTINLLKKGMEV 478
Query: 292 YVSHVR 297
V H +
Sbjct: 479 EVKHSK 484
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/280 (43%), Positives = 182/280 (65%), Gaps = 14/280 (5%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D ++RS+NG RVAD IL VPN++ FR TLRC+K WA R+ VYSNV GFLGGV
Sbjct: 154 ILRGLDAHSIRSINGTRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVA 213
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS---VWDPRKN 119
WA+LVARVCQLYP+A S L+S+FF + T W WP+PVML + ED F+ W+P+ N
Sbjct: 214 WAILVARVCQLYPHASASTLISKFFHILTSWSWPSPVMLKAV-EDGPAFANTKPWNPKLN 272
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P DRSH MP+ITP+YP M +++NV+ ST R++T + + +I ++I A+W LFE +
Sbjct: 273 PTDRSHRMPVITPSYPSMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSAKWPQLFEAH 332
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
FF+ Y+ YLQ+ +VA + + L W G VE+R RQL +K+E + ++Q HP+ + +
Sbjct: 333 SFFKMYRQYLQITVVADNYELQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGF--- 388
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
S+ C + + VT + +++D T+ + E+
Sbjct: 389 SETC------LYRTSTDKVTVSQGEKYDNNRTIGKMKMEV 422
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 149/219 (68%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSL G RV D IL+ VPN+ FRM LRC+K WA++R +YSNV GFLGGV
Sbjct: 188 NLLRNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGV 247
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPN +VSRFF ++ QW+WP PV+L PIE+ L VW+P+ P
Sbjct: 248 AWAMLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPS 307
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP M +++NVS ST VMT +F+ + + + + K W LF + F
Sbjct: 308 DRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWCELFAKHDF 367
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
F YK YLQV + AD L W G VES+ RQL +K+E
Sbjct: 368 FFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 6/298 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + VRSLNGCRV D+IL+ VPN+E FR+TL +K WAK+ GVYSNV GFLGGV+WA+
Sbjct: 186 NLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNVLGFLGGVSWAM 245
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPI---EEDELGFSVWDPRKNPRD 122
LVAR CQLYPNA S L+ +FF V+++W WPNPV+L I E++LGF WDPR NP D
Sbjct: 246 LVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPGD 305
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS++NVS+ST ++M ++F G + E++ KA W LF P FF
Sbjct: 306 RYHLMPIITPAYPQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKANWDRLFTPPNFF 365
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--IDPS 240
Y++Y+ + + ++ L W G VES+ R L +E + L H P Y +D
Sbjct: 366 HKYRHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSE 424
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRR 298
+ +F+GL ++ ++I+ + + M +K GM HVRR
Sbjct: 425 GEKHVTRWFIGLMFEKLENVNINLTYEIQMFKNKVHAQAVKIMMFKEGMVTEAKHVRR 482
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 213/397 (53%), Gaps = 42/397 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D++ VRSLNGCRV D+IL+ VPN+E+FR+ LR +K WAK+ G+YSNV G+LGGV+
Sbjct: 194 LLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKKNGIYSNVLGYLGGVS 253
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + L+ +FF V++QW+WP PV+L E LGF VWDPR
Sbjct: 254 WAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPR----- 308
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
V++S +M E F+ G I EEI + KA W LFEP FF
Sbjct: 309 --------------------VTMSDRTIMQEAFETGLAITEEIIMGKASWDKLFEPPNFF 348
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
Y++Y+ + ++ A+D L W G VES+ R L +ER+ N L H P E P KP
Sbjct: 349 GKYRHYIVLLASSSTAEDQLEWCGLVESKIRHLIGTLERNPNITL-AHINP-ESFPPLKP 406
Query: 243 CPN---SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRR 299
S +F+GL K+G DI+ V+ + +K GM I HV+R+
Sbjct: 407 EAGKHVSMWFIGLTFKKGENLNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKHVKRK 466
Query: 300 QLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSV 359
L +++ + KR R + ++ G SG+ G + + + + + + D+S+
Sbjct: 467 DLSNYIAANQIKRERKTSSSTQRNGN--------SSGNGGVSPRNQGDQTLRKRKSDQSL 518
Query: 360 ----KRASISSEVPQPVSPGKTTGDSTNDSEVMSAGG 392
K+ I Q P TT + + V+ + G
Sbjct: 519 ESNDKKRKIQDSEQQHQHPQSTTQQKEDGTLVVQSCG 555
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 148/219 (67%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSL G RV D IL+ VPN+ FRM LRC+K WA+RR +YSNV GFLGGV
Sbjct: 188 NLLRNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGV 247
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPN +VSRFF + QW+WP PV+L IE+ L VW+P+ P
Sbjct: 248 AWAMLTARICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPS 307
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP M +++NVS ST VMT +F+ + + + + K WS LF + F
Sbjct: 308 DRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTHWSELFAKHDF 367
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
F YK YLQV + AD L W G VES+ RQL +K+E
Sbjct: 368 FFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 188/305 (61%), Gaps = 12/305 (3%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAX 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
PIITPAYP NS+YNVS+ST V E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LXPIITPAYPQQNSTYNVSVSTRXVXVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 KNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPS 240
K+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 372 KHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPD 429
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
K + + +GL K+ + +DI+ D +R+ I F + I HV
Sbjct: 430 KEEFRTXWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKXF-EVDXKIAAXHV 488
Query: 297 RRRQL 301
+R+QL
Sbjct: 489 KRKQL 493
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/244 (48%), Positives = 164/244 (67%), Gaps = 2/244 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSLNG RV D IL+ VPNV FR+ LR +K WAK + +YSNV GFLGGV
Sbjct: 177 NILKNLDERCVRSLNGSRVTDDILRLVPNVATFRIALRTIKLWAKCKAIYSNVMGFLGGV 236
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L+AR+CQLYPNA + +V+RFF + QW+WP PV+L P+E+ L VW+P+ P
Sbjct: 237 AWAMLIARICQLYPNACAASIVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPA 296
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MPIITPAYP M +++NV+ ST ++M ++F+ G + I L QWS LF F
Sbjct: 297 DRSHRMPIITPAYPSMCATHNVTESTRKIMIQEFKNGIDVASNIILGSGQWSDLFVKSDF 356
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ +K+YLQ+ + ++ L W G VE++ RQL LK+E + + HPY + D +
Sbjct: 357 FQQFKHYLQITSSSYSSETQLMWSGLVEAKLRQLVLKLE-TVDMIELAHPYVKGF-DKAH 414
Query: 242 PCPN 245
C N
Sbjct: 415 YCLN 418
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 147/219 (67%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSL G RV D IL+ VPN+ FRM LRC+K WA+RR +YSNV GFLGGV
Sbjct: 188 NLLRNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGV 247
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPN +VSRFF + QW+WP PV+L IE+ L VW+P+ P
Sbjct: 248 AWAMLTARICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPS 307
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP M +++NVS ST VMT +F+ + + + + K W LF + F
Sbjct: 308 DRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTNWDELFAKHDF 367
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
F YK YLQV + AD L W G VES+ RQL +K+E
Sbjct: 368 FFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 193/351 (54%), Gaps = 46/351 (13%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
M++L N+D + VRSLNGCRV D+IL VP++ FR LR +K WAK++GVYSNV G+LGG
Sbjct: 184 MTLLKNLDAKCVRSLNGCRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGG 243
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML---CPIEEDELGFSVWDPR 117
V+WA+LVAR CQLYP+A +++V +FF V++QW WP PV L + GFSVWD R
Sbjct: 244 VSWAMLVARTCQLYPHAAAAVVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSR 303
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE 177
N DR H MPIITP YP NS++N SLST +MT+ F+ G + E I K W LF
Sbjct: 304 TNVADRYHLMPIITPVYPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKGTWHDLFS 363
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER------------DTNG 225
P FF YK ++ + VA +DLLTW G VES+ R L + +ER N
Sbjct: 364 PPEFFGQYKTFIMLTAVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNK 423
Query: 226 LLQCHP-------------------YPNEYIDPSKPCPNSA-----FFMGLRRKEGVTGK 261
+ + P PNE + ++P P +F+GL + K
Sbjct: 424 VKEDKPPAEPVKEQQEESPKASAETEPNETEEKAEPKPQEETEGVNWFIGLHFGQ---TK 480
Query: 262 ERQQFDIRGTVDNFREEIGM----YMFWKPGMDIYVSHVRRRQLPSFVFPD 308
E+ D+ V N R+ I K GMD+ V ++RR L + + P+
Sbjct: 481 EKLNLDLTENVRNLRDVIFRQAENIKILKDGMDVEVRVLKRRDLATVLPPE 531
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 149/219 (68%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE+ VRSL G RV D IL+ VPN+ FRM LRC+K WA+RR +YSNV GFLGGV
Sbjct: 188 NLLRSLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGV 247
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPN +VSRFF ++ QW+WP PV+L IE+ L VW+P+ P
Sbjct: 248 AWAMLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPS 307
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP M +++NVS ST VMT +F+ + + + + K WS LF + F
Sbjct: 308 DRLHRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWSELFAKHDF 367
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
+ YK YLQV + AD L W G VES+ RQL +K+E
Sbjct: 368 YFKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 195/344 (56%), Gaps = 20/344 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+DE++VRSLNGCRVAD+IL+ VPNV +F LR +K WAK G+YSNV G+LGGV
Sbjct: 321 SILRNLDEKSVRSLNGCRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLGYLGGV 380
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE------LGFSVWD 115
+WA+LVAR CQLYPN P+ LV +FF +YT+W WP+PV+L E L VWD
Sbjct: 381 SWAILVARTCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWD 440
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSAL 175
PR DR H MPI+TPA+P NS++NV+ S+L+++ + + G +I KA+WSAL
Sbjct: 441 PRSRSGDRFHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKAEWSAL 500
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE 235
FE FF YK++L + ++A D L W G VES+ R L +ER + CH +
Sbjct: 501 FEEVNFFSRYKHFLALLCLSATEQDELVWCGLVESKIRFLIASLER-RESIRVCHVHTKY 559
Query: 236 YIDPSKPCPNSA---------FFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK 286
Y + P P +F+GL + V+ K Q +++ +D +
Sbjct: 560 YQPRNDPLPVQVSLQNPRCRLWFIGLDLNKTVSRKIDIQHEVQSFMDLLNSMATTQNIYV 619
Query: 287 PGMDIYVSHVRRRQLPSFV----FPDGYKRPRPSRHFNEQAGKP 326
GM + ++R+ +L ++ G K P+ R Q +P
Sbjct: 620 EGMSVIPHYLRKAELVKWLKMEDLTKGRKAPKRRRIAASQNQQP 663
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 160/238 (67%), Gaps = 2/238 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA++R VY NV GF GGV
Sbjct: 174 NLLKNIDERDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +YT+W WP PV+L PIE+ L VW+PR P
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ + G + +I L K+ WSAL E + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVIMSELARGAEVMNQINLGKSSWSALLERHDF 353
Query: 182 FEAYKNYLQVDIVAADAD-DLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F YK YL + +D + L W G VES+ R L LK+E T+G+ HPY ++ D
Sbjct: 354 FHKYKFYLCIVAATTSSDEEHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSD 410
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 194/324 (59%), Gaps = 21/324 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N++E T RS+NGCRVA IL VPN ++FR TLR +K WA RRG+Y+ V ++GGV
Sbjct: 182 AILRNMNEATARSINGCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-----DELGFSVWDP 116
WA+L ARVCQLYPN +P+ L+ +FFRVY QW W PVMLC I+E + F VWDP
Sbjct: 242 AWAILTARVCQLYPNFLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDP 301
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ----W 172
R NP DR H MP+ITPA+P MNS++N++L+T R++T++F+ N + ++ AQ W
Sbjct: 302 RNNPTDRQHLMPVITPAFPSMNSTHNITLTTKRILTDEFKRANDLL-KVNAKGAQMKNIW 360
Query: 173 SALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
+ E F ++K++L ++++A W+GW+ SR R L KIE N L++ P+
Sbjct: 361 ERVLEKEDMFASHKHFLVIEVLATTEHVHGKWEGWIGSRMRFLIKKIETVPNILVR--PW 418
Query: 233 PNEYIDPSKPCP-NSAFFMGLRRKE-----GVTGKERQQFDIRGTVDNFREEIGMYM--- 283
P + K S F G + KE + FD+R ++ F+E I +
Sbjct: 419 PEFFKYEHKEWDYASCVFFGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEME 478
Query: 284 FWKPGMDIYVSHVRRRQLPSFVFP 307
+K + + + +++ QLP FV P
Sbjct: 479 AYKDQIAVNIRYLKNSQLPHFVNP 502
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 199/355 (56%), Gaps = 44/355 (12%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D++ VRSL G RV D+IL+ VP+V FR +LR +K WAK R VYSNV GF GGV
Sbjct: 184 ALLKNLDDRCVRSLGGSRVTDEILRLVPDVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGV 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELG--FSVWDPRKN 119
WA+ VARVCQLYPN +V+RFF V +QW WP+PV+L PI G +W+P+
Sbjct: 244 AWAMCVARVCQLYPNKPAGTIVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIY 303
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P+DR H MPIITPAYPCM S++N++ ST ++M +F+ G + +EI W+ALF+ +
Sbjct: 304 PQDRGHRMPIITPAYPCMCSTHNITKSTAQIMMTEFKRGLAVTDEIATGTKPWAALFDKH 363
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--- 236
FF Y+ YLQ+ + +A+ L W G VE+R RQL +K+E + + HP+ +
Sbjct: 364 DFFTRYRYYLQITASSPNAEIQLKWAGTVEARLRQLVMKVE-EVETVDLAHPFIKGFERE 422
Query: 237 ----------------IDP---------------SKPCPNSAFFMGLR---RKEGVTGKE 262
+ P S S+FF+GL + G TG
Sbjct: 423 SYYLTSDEVRAIQVGDVPPDVKGRTLADIEGKEGSGAVYTSSFFIGLLVQPKPAGHTGP- 481
Query: 263 RQQFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
++ DI V F + + + + M I V +++ QLP +VF DG +RP S
Sbjct: 482 -RKLDISYPVGEFTRMVKQWEGYAEDSMGIIVRYIKGAQLPDYVF-DGEQRPSAS 534
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/361 (37%), Positives = 203/361 (56%), Gaps = 29/361 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+DE++VRSLNGCRVAD+IL+ VPN+ +F LR +K WAK G+YSNV G+LGGV
Sbjct: 317 SILRNLDEKSVRSLNGCRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGV 376
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS--------- 112
+WA+LVAR CQLYPN P+ LV +FF +YT+W WP+PV+L +E E+ +
Sbjct: 377 SWAILVARTCQLYPNTGPARLVQKFFLLYTKWEWPHPVVL---KETEISHARDMPSLQEL 433
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQW 172
VWDPR DR H MPI+TPA+P NS++NV+ S+L+++ + + G +I K W
Sbjct: 434 VWDPRSRSGDRFHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKTGW 493
Query: 173 SALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
SALFE FF YK++L + ++A D L W G VES+ R L +ER + CH +
Sbjct: 494 SALFEEVNFFSRYKHFLALLCLSATEQDELVWCGLVESKIRFLIASLER-RESIRVCHVH 552
Query: 233 PNEYIDPSKPCPNSA---------FFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM 283
Y + P P +F+GL + V+ K Q +++ +D
Sbjct: 553 TKYYQPRNDPFPVQVSLQNPRCRLWFIGLDLNKTVSRKIDIQHEVQSFMDLLNSMATTQN 612
Query: 284 FWKPGMDIYVSHVRRRQLPSFV----FPDGYKRPRPSR---HFNEQAGKPCEDVKMCQSG 336
+ GM + ++R+ +L ++ G K P+ R N+QA P ++ ++
Sbjct: 613 IYVEGMSVIPHYLRKAELVKWLKMEDLTRGKKAPKRRRIATSQNQQATGPLQNKTRSETS 672
Query: 337 S 337
S
Sbjct: 673 S 673
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 166/252 (65%), Gaps = 6/252 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + VRSLNGCRV D+IL+ VPN+E FR+TLR +K WAK+ GVYSNV GFLGGV+WA+
Sbjct: 188 NLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLRAVKLWAKKHGVYSNVLGFLGGVSWAI 247
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPI---EEDELGFSVWDPRKNPRD 122
LVAR CQLYPNA S L+ +FF V+++W WPNPV+L I E++LGF +WDPR NP D
Sbjct: 248 LVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGD 307
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP N S++VS+ST ++M ++F + E++ KA W LF P FF
Sbjct: 308 RYHLMPIITPAYPQQNFSFSVSMSTRKIMCDEFFIRLKNTEDVISGKANWDILFTPPNFF 367
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--IDPS 240
YK+Y+ + + ++ L W G VES+ R L +E + L H P Y +D
Sbjct: 368 HKYKHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSE 426
Query: 241 KPCPNSAFFMGL 252
+ +F+GL
Sbjct: 427 GEKHVTRWFIGL 438
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 194/356 (54%), Gaps = 58/356 (16%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D++ +RSLNG RV D++L+ VP+V FR LR +K WA++R +Y NV GF GGV WA+
Sbjct: 178 NIDDRCLRSLNGSRVTDEMLRLVPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAM 237
Query: 66 LVARVCQLYPNAIPSMLVSR--------------------FFRVYTQWRWPNPVMLCPIE 105
LVAR+CQLYP ++SR FF + QW+WP PV+L PIE
Sbjct: 238 LVARICQLYPKGCVGSIISRCVMCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIE 297
Query: 106 EDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI 165
E L VW+P+ P DRSH MPIITPAYP M S++NV+LST ++MT +F+ I +++
Sbjct: 298 EGPLQVRVWNPKLYPSDRSHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKV 357
Query: 166 ELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNG 225
+ A+WS LF+P+ FF Y+ YLQ+ + AD L W G VESR RQL +K+E +
Sbjct: 358 FVGSAKWSELFQPHDFFSKYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLEY-VDT 416
Query: 226 LLQCHPYPNEYIDPSKPCPN----------------------------------SAFFMG 251
LL HP+ + D C N + F++G
Sbjct: 417 LLLAHPFVKSF-DRVNYCINEEEQRAVSIGEVPAAVDKRTEQDLIAGQGGTVYTTTFYIG 475
Query: 252 LRRKEGVTG-KERQQFDIRGTVDNFREEIGMYMFWKP-GMDIYVSHVRRRQLPSFV 305
L+ + G K ++ DI + F + + M+ + P M + V +++ LP++V
Sbjct: 476 LQIERKPAGDKGPRKLDISYPTNEFTKLVKMWDSYDPDSMGVIVRYIKSTALPAYV 531
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 205/363 (56%), Gaps = 26/363 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S++ ++D + VRS NG RV +QIL+ VPNV +FR+ LR +K WAK+R +YSN GFLGGV
Sbjct: 173 SIVKDIDIRCVRSFNGYRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGV 232
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA++VAR+CQ+YPNA S LV +FF++++ W WP P+ L +E+ WDP+ N
Sbjct: 233 SWAIMVARICQVYPNATTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQS 292
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP N+S NVS STL ++ E+ G+ IC+EIE KA+WS LFE F
Sbjct: 293 DRCHLMPIITPAYPQQNTSVNVSRSTLAILNEEIHRGHAICQEIEQKKAKWSELFEQTDF 352
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER-DTNGLLQCHP--YPNEYID 238
F+ Y++Y ++ + L W G VES+ R L +ER + L HP +P
Sbjct: 353 FQKYQHYAVLEASYTTEEKCLEWVGLVESKIRLLVSTLERNELVSLAHVHPHAFPGHRKA 412
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRR 298
K ++ + +GL + K+ ++F+ + +E GM + V+ +RR
Sbjct: 413 NKKDGQSTMWLIGLV----LNVKDSERFNSLARSSDIYDE---------GMSLSVACLRR 459
Query: 299 RQLPSFVFPDGYKRPRPSRHFNEQAGKPCE--DVKMCQSGSSGRHLKREKEHEMEEVRPD 356
L ++ + P+PS PC V + G+ R L E ++++ D
Sbjct: 460 EDL---IYEPQQRAPQPSETL-----PPCHVSPVSADKQGTKKRELLHRSETPSKKIKDD 511
Query: 357 KSV 359
KS+
Sbjct: 512 KSL 514
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 165/249 (66%), Gaps = 7/249 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL VP F+ LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLRNIDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +Y QW WP PV+L PIE+ L VW+P+ P
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ ++F+ G I +I +NK+ WS L + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKIILDEFKRGIDIMSQISMNKSTWSDLLARHTF 353
Query: 182 FEAYKNYLQVDIVAA---DADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F YK YL IVAA ++D L W G VESR R L K+E T G+ HPY + +
Sbjct: 354 FYKYKFYLC--IVAATQGSSEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPYVKPF-E 409
Query: 239 PSKPCPNSA 247
S C N A
Sbjct: 410 NSYACENQA 418
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/233 (51%), Positives = 158/233 (67%), Gaps = 3/233 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D++ VRSL G RV D+IL+ VP+VE FR +LR +K WAK R VYSNV GF GGV
Sbjct: 171 ALLKNLDDRCVRSLGGSRVTDEILRLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGV 230
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELG--FSVWDPRKN 119
WA+ ARVCQLYPN + +V+RFF V +QW WP+PV+L I +G VW+P+
Sbjct: 231 AWAMCTARVCQLYPNKPAATIVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIY 290
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P+DR H MPIITPAYPCM S++NV+ ST +VM +F+ G + + I AQWSALFE +
Sbjct: 291 PQDRGHRMPIITPAYPCMCSTHNVTKSTAQVMMTEFKRGLAVTDAIATGSAQWSALFEKH 350
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
FF Y+NY+Q+ + +AD L W G VESR R L LK+E + + HP+
Sbjct: 351 DFFTRYRNYIQITASSPEADAHLKWAGTVESRLRLLVLKVE-EIETVDMAHPF 402
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 193/351 (54%), Gaps = 41/351 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D++ VRSLNG RV D++L+ VPNV+ FR LRC+K WA+R+ +YSNV GF GGV
Sbjct: 178 NILRNLDDRCVRSLNGYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGV 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYPNA +V RFF + QW WP PV+L +++ ++G W+P+ P
Sbjct: 238 AWAMLVARVCQLYPNANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPG 297
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MP+ITP YP M +++NVS+ST ++ E+ + G ++ I L ++WS LFE + F
Sbjct: 298 DRAHRMPVITPVYPAMCATHNVSVSTFAIIEEELRRGTKLMNSIILGSSKWSELFEKHDF 357
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN------- 234
F Y+ +LQ+ A A+ L W VE++ RQL K+E L HP+
Sbjct: 358 FHKYRYFLQIIASTASAEAQLMWAPNVEAKIRQLVSKLEL-VESLTLAHPFTKGFEQVFY 416
Query: 235 ---------------------------EYIDPSKPCPNSAFFMGLR---RKEGVTGKERQ 264
E ++ ++ F++GL R G G R
Sbjct: 417 CMNDDEIRSVAQGEVPDVIARRRPQDIEGVESGSKVYSTTFYIGLAIEPRPVGAIGTRR- 475
Query: 265 QFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
DI F + M+ F + M + V H++ LP +VF G ++PR
Sbjct: 476 -LDISYPTTEFTKVAKMWERFDEATMGLVVRHIKSSALPDYVFEPGERQPR 525
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 194/335 (57%), Gaps = 10/335 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+++ TVRS+NGCRVA IL VPN +FRMTLR +K WA RR +YS V G+LGGV
Sbjct: 182 NILRNMNDSTVRSINGCRVASFILDSVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-----DELGFSVWDP 116
WA+L ARVCQLYPN +P+ L+ +FFRVY+ W W PV LC I++ + F VWDP
Sbjct: 242 AWAILTARVCQLYPNYVPNQLIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDP 301
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF 176
+ NP DR H MPIITPA+P MNS++NV+ +T RVMT++ + I + K Q L
Sbjct: 302 QNNPHDRQHLMPIITPAFPSMNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELV 361
Query: 177 EPYL-FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE 235
F +YK++L +++ A W+GW+ SR R L K+E N ++ P +
Sbjct: 362 LEEEDIFSSYKHFLIIEVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNTQIRPLPGFFK 421
Query: 236 YIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM---FWKPGMDIY 292
+ D +SAFF +G+ + DIR ++ +F++ I + K + +
Sbjct: 422 FEDSEWEYASSAFFALKCLSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVN 481
Query: 293 VSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPC 327
+ HV+ QLP +V K+ RP E++ + C
Sbjct: 482 IRHVKSSQLPDYVQAKNSKK-RPLDEQLEKSKRVC 515
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 158/236 (66%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNLDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ S +V +FF +YT+W WP PV+L IE+ L VW+PR P
Sbjct: 234 AWAMLVARICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ + G+ I +EI K WS LFE + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSF 353
Query: 182 FEAYKNYLQVDIVAAD-ADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V + D A++ W G++ES+ RQL LK+E G+ HPY ++
Sbjct: 354 FYKYKFYLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDF 408
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 158/236 (66%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNLDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ S +V +FF +YT+W WP PV+L IE+ L VW+PR P
Sbjct: 234 AWAMLVARICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ + G+ I +EI K WS LFE + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSF 353
Query: 182 FEAYKNYLQVDIVAAD-ADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V + D A++ W G++ES+ RQL LK+E G+ HPY ++
Sbjct: 354 FYKYKFYLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDF 408
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 158/236 (66%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNLDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ S++V +FF +YT+W WP PV+L IE+ L VW+PR P
Sbjct: 234 AWAMLVARICQLYPNAVSSVIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ + G+ I ++I K WS LFE + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCF 353
Query: 182 FEAYKNYLQVDIVAAD-ADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V D A++ W G++ES+ RQL LK+E G+ HPY ++
Sbjct: 354 FYKYKFYLCVVAATIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDF 408
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 188/338 (55%), Gaps = 25/338 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+ R +YSNV GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L PIE+ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVSLST V+ + + G I E+I L + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
YK YL + + + W G VE++ R L + +++ + + HP+P ++ +
Sbjct: 361 SKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKAS-IEVAHPFPKAHVAALE 419
Query: 242 PCPNS--------------------AFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGM 281
S +++GL K V G R DI F+
Sbjct: 420 SANGSINMPGLGQTEESNNHTLHTTTYYIGLELKPLVPGASR-SLDISSETHMFKNMCTS 478
Query: 282 YMFWKPGM-DIYVSHVRRRQLPSFVFPDGYKRP-RPSR 317
+ ++PG+ D+ ++HVR LP VF G RP RP +
Sbjct: 479 WAQYQPGINDLTITHVRNYDLPEDVFHPGETRPVRPKK 516
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 189/309 (61%), Gaps = 17/309 (5%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D+ T RS+NGCRVA +L VPN +FR TLR +K WA++RG+YSN+ G+LGGV
Sbjct: 183 ILRNLDDITARSINGCRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVA 242
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-----DELGFSVWDPR 117
WA+L ARVCQLYPN +P+ ++ +FF+VY W W PV++ I++ + F VWDP+
Sbjct: 243 WAILTARVCQLYPNYLPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPK 302
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE 177
NP+DR H MPIITPA+P MNS++NV+ +T RVM +F+ + + + ++ W+ L E
Sbjct: 303 TNPQDRLHLMPIITPAFPAMNSTHNVTNTTKRVMINEFKRAHELLK--TQSQMTWNDLLE 360
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
P F +K++L + +VA+D W GW+ESR R L K+E + L+ P+
Sbjct: 361 PANIFNEFKHFLVIIVVASDEKAHSKWHGWIESRIRFLIRKLEAIEHTELRPWPHSITME 420
Query: 238 DPSKPCPNSAF-FMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM---FWKPGMDIYV 293
DP NS + F+GL E QFDIR + F+ I + ++ +D+ +
Sbjct: 421 DPD--WTNSKWIFIGL----SYNKTEESQFDIRTPIKEFKNLIFSWQELTSYESKVDVRI 474
Query: 294 SHVRRRQLP 302
++++ QLP
Sbjct: 475 EYMKKSQLP 483
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 161/239 (67%), Gaps = 4/239 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE +R+LNG RV DQIL+ VP V F+ LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNIDENDMRALNGTRVTDQILQLVPKVTVFKHALRCIKLWAQQRAVYGNMFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +YT+W WP PV+L PIE+ L VW+PR P
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ + + G+ + +I LN W+ LF+ + F
Sbjct: 294 DRQHKMPVITPAYPSMCATHNINSSTQKVIMNELERGSELMAQISLNNKTWADLFQRHDF 353
Query: 182 FEAYKNYLQVDIVAADA--DDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F YK YL + I A + ++ W G VES+ R L K+E T+G+ HPY ++ D
Sbjct: 354 FHRYKFYLCI-IAATEGTNEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSD 410
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 193/324 (59%), Gaps = 13/324 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+++ TVRS+NGCRVA IL VPN +FR TLR +K WA RR +YS V G+LGGV
Sbjct: 182 NILRNMNDSTVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-----LGFSVWDP 116
WA+L ARVCQLYPN P+ L+ +FFRVY+ W+W PV LC I+E + F VWDP
Sbjct: 242 AWAILTARVCQLYPNCAPNQLIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDP 301
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSAL 175
R NP+DR H MPIITPA+P MNS++NV+ +T RV+TE+ I + L + W +
Sbjct: 302 RVNPQDRHHLMPIITPAFPSMNSTHNVTATTKRVITEELMRALEIFKTSNLTNVELWEKV 361
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLT-WKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
E F YK++L +++ ++ W+GW+ SR R L ++E N ++ P
Sbjct: 362 LEEEDVFSNYKHFLVIEVYGSNEHVAHNKWEGWIGSRMRFLISRLENLGNTYIRPIPGFF 421
Query: 235 EYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM---FWKPGMDI 291
++ D + +SAFF + GV + + DIR +V +F++ I + ++ +
Sbjct: 422 KFEDDNWDYASSAFF-AFKVISGVV-ETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISF 479
Query: 292 YVSHVRRRQLPSFVFPDGYKRPRP 315
+ H++ QLP +V + K+ RP
Sbjct: 480 NIKHLKNNQLPDYVLSNKSKK-RP 502
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 155/231 (67%), Gaps = 1/231 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L V+E+ V SLNG RV DQIL+ VPN F+ LR +KFWA+RR +Y+NV GF GGV
Sbjct: 174 NLLKGVEERCVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA++VAR+CQLYPNA+ S++V++FFR+ QW WP P++L PIE+ L +W+P+ P
Sbjct: 234 AWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPS 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D++H MPIITPAYP M +++N++LST ++ + I ++I + WSALF+ + F
Sbjct: 294 DKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDF 353
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK+YL + A A+ L W G VES+ R L ++E + + HP+
Sbjct: 354 FHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLEL-VDAIALAHPF 403
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 159/236 (67%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA++R VY NV GF GGV
Sbjct: 175 NLLKNLDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +YT+W WP PV+L IE+ L VW+PR P
Sbjct: 235 AWAMLVARICQLYPNAVSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPH 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ ++ G+ I +I WS LF+ + +
Sbjct: 295 DRLHRMPVITPAYPSMCATHNITSSTQKVILKELSRGSSIMNDINTGNKTWSDLFKRHEY 354
Query: 182 FEAYKNYLQVDIVAAD-ADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F AYK YL V D ++ W G+VESR RQL LK+E T+G+ HPY ++
Sbjct: 355 FHAYKFYLCVVAATVDTSEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPYVKDF 409
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 190/320 (59%), Gaps = 11/320 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+++ TVRS+NGCRVA IL VPN +FR TLR +K WA RR +YS V G+LGGV
Sbjct: 182 NILRNMNDSTVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-----LGFSVWDP 116
WA+L ARVCQLYPN P+ L+ +FFRV++ W+W PV LC I+E + F VWDP
Sbjct: 242 AWAILTARVCQLYPNCAPNQLIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDP 301
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSAL 175
R NP+DR H MPIITPA+P MNS++NV+ +T +V+TE+ I + L+ + W +
Sbjct: 302 RVNPQDRHHLMPIITPAFPSMNSTHNVTATTKKVITEELMRALEIFKTPNLSNLELWEKV 361
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE 235
E F YK++L +++ + W+GW+ SR R L ++E N ++ P +
Sbjct: 362 LEEQDVFSNYKHFLVIEVYGSTEHAHGKWEGWIGSRMRFLISRLENLGNTHIRPIPGFFK 421
Query: 236 YIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM---FWKPGMDIY 292
+ D + +SAFF + GV + + DIR V +F++ I + ++ +
Sbjct: 422 FEDDNWDYASSAFF-AFKVISGV-AENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFN 479
Query: 293 VSHVRRRQLPSFVFPDGYKR 312
+ H++ QLP +V + K+
Sbjct: 480 IKHLKNNQLPDYVLSNKSKK 499
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 158/238 (66%), Gaps = 2/238 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA+++ VY NV GF GGV
Sbjct: 174 NLLRNLDERDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +YT+W WP PV+L PIE+ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYAN 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ + + G + +I L K WS LF+ + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDF 353
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F YK YL V A ++ L W G +ES+ R L LK+E T G+ HPY ++ D
Sbjct: 354 FHHYKFYLCVVAATVASDEEHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSD 410
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 193/358 (53%), Gaps = 49/358 (13%)
Query: 2 SVLNNVDEQTVRSLN-------GCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNV 54
++L N+DE+ VRSLN G RV D+IL+ VPNV+ FR +LRC+K WA+RR +YSNV
Sbjct: 168 NLLKNLDERCVRSLNDNLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNV 227
Query: 55 TGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVW 114
GFLGGV WA+LVAR+CQLYPN ++++FF + QW+WP+PV+L IE+ L VW
Sbjct: 228 NGFLGGVAWAMLVARICQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVW 287
Query: 115 DPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSA 174
+P+ P DR+H MPIITPAYP M S++NV ST VM ++F+ G I + I WS
Sbjct: 288 NPKIYPSDRAHRMPIITPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHKGTTTWSQ 347
Query: 175 LFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY-- 232
LF + FF YK+YLQ+ A+ W G VES+ RQL K+E +G+ HP+
Sbjct: 348 LFNKHEFFSKYKHYLQIIASGQTAESQKKWSGAVESKVRQLVSKLEL-VDGIELAHPFVK 406
Query: 233 ---------------------PNEYIDPSKPCPN----------------SAFFMGLR-R 254
P+E + P S F++GL +
Sbjct: 407 GFSEVFICLNDEEVQHAAEYNPSEEVKERSKKPEEYENKEAEDGIHRVYISTFYIGLAIQ 466
Query: 255 KEGVTGKERQQFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYK 311
E++ ++ + F + ++ F + M I+V +++ LP VF G +
Sbjct: 467 PRNPETNEKRTLNLTYPTNEFMKLTKLWDQFVEGEMKIFVKNIKASALPDVVFEGGIR 524
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 182/315 (57%), Gaps = 9/315 (2%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
LN +D+ +VRSLNGCRV ++IL+ + + E+FR+TL +K+WA+ RG+YSNV GFLGGVN
Sbjct: 175 LNGLDDVSVRSLNGCRVTEKILQLISHQEYFRITLTAIKYWARNRGIYSNVLGFLGGVNL 234
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCP-IEEDELGFSVWDPRKNPRD 122
A++ A+VCQLYP+A+P L+ +FF +Y W WPNP+ + P I +LGF W+P+ P+D
Sbjct: 235 AIMAAKVCQLYPDALPPTLLIKFFHLYHLWNWPNPLSITPCINPLQLGFPSWNPKVYPKD 294
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITP YP +NSSYNV STL VM +F+ + + WS L FF
Sbjct: 295 RLHLMPIITPCYPSINSSYNVMSSTLDVMKTEFKNASLQVSNVRAKVLSWSELLTEASFF 354
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY-IDPSK 241
+ Y+++LQV I + D +D W WVESR R +++E ++ P+ + K
Sbjct: 355 DKYRHFLQVQISSEDEEDFGRWVTWVESRLRTFFIRLE--AIPFVRIRPFARFFNFQELK 412
Query: 242 PCPNSAFFMGLRRKEGVTGKERQQ-----FDIRGTVDNFREEIGMYMFWKPGMDIYVSHV 296
S FF+ L + ++ Q D V F + + MD+ V HV
Sbjct: 413 GAYISWFFVALDFQRPEDKRQNAQEPELTIDFSDAVRAFANHVDQWEERNSTMDLEVKHV 472
Query: 297 RRRQLPSFVFPDGYK 311
R Q+P++V Y+
Sbjct: 473 VRSQIPAWVIDATYR 487
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 157/232 (67%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+++LR +K WA+RR +Y+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRSLNGTRVTDEILQLVPKPVVFKLSLRAIKLWAQRRAIYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ S++VS+FF + TQW WP PV+L PIE+ L VW+PR P+
Sbjct: 235 AWAMLVARICQLYPNAVSSVIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ + Q G+ I +I +K QW LF + F
Sbjct: 295 DRQHRMPVITPAYPSMCATHNITASTQKVILNELQRGSLIMNDIISHKKQWEDLFVKHDF 354
Query: 182 FEAYKNYLQ-VDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL + D + L W G VES+ R L K+E + G+ HPY
Sbjct: 355 FYKYKFYLNIIAFTRGDDEQHLKWSGLVESKLRLLVQKLE-NFQGINLAHPY 405
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 158/232 (68%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D++ +R+LNG RV DQIL+ VP FR LR +K WA+RR +Y+N+ GF GGV
Sbjct: 1136 NLLRNIDDRDLRALNGTRVTDQILQLVPQKMVFRHALRTIKLWAQRRAIYANMFGFPGGV 1195
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++VS+FF++Y QW+WP PV+L PIE+ L +W+P+ +
Sbjct: 1196 AWAMLVARICQLYPNAVGAVIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQ 1255
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ ++ Q G I +I+ K W LF + F
Sbjct: 1256 DRLHRMPVITPAYPSMCATHNITASTQKIILKEMQRGLEIMNDIQFGKRTWKDLFAKHDF 1315
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F AYK YL V D+ + L W G VES+ R L K+E NG++ HPY
Sbjct: 1316 FFAYKFYLTVITATRDSYEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPY 1366
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 138/181 (76%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 311
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ Y
Sbjct: 312 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
Query: 186 K 186
K
Sbjct: 372 K 372
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 194/347 (55%), Gaps = 46/347 (13%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE+ ++SL G R+ D+IL +PN + FR LRC+K WA+RR +YSN+ GFLGGV
Sbjct: 176 LLRNLDERCIKSLGGSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVA 235
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR+CQLYPNA+ +V RFF + +W+WP PV+L IEE L +W+P+ P D
Sbjct: 236 WAMLVARICQLYPNAVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSD 295
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R+H MPIITP+YP MNS++NVS ST VM +F+ G I +I+ +A W+ LF + FF
Sbjct: 296 RAHRMPIITPSYPSMNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEASWADLFNKHTFF 355
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQC-HPYPNEY----- 236
+++YLQ + A ADD + W QL L+++ ++Q P+ +
Sbjct: 356 TDFRHYLQ---IVASADDQHSHDKW------QLVLRLDAQEGSIIQVTRPFIKGFERIYH 406
Query: 237 --------------------------IDPSKPCPNSAFFMGL--RRKEGVTGKERQQFDI 268
D + +AFF+GL + K+G +G +Q +I
Sbjct: 407 CISDDERRAATEGRFSDLKAAEGRPAGDKTTTVYTTAFFLGLEFKPKDGNSGT--RQLNI 464
Query: 269 RGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
F + + + + M + V H++R +LP FV+ +RPR
Sbjct: 465 SFPTGEFCNLVKKWETYDETKMRVNVRHIKRSELPEFVYESPAERPR 511
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 171/279 (61%), Gaps = 12/279 (4%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D+++VRSLNGCRVA+ +LK VPN E+F +TLR +K WAK G+YSN GF GG+ WA+
Sbjct: 190 NLDQESVRSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAI 249
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS-----VWDPRKNP 120
LVAR CQLYPNA PS L+ + F +++ W+WP PV+L I D + + VWDPR+N
Sbjct: 250 LVARACQLYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQ 309
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPI+TPA+P NS++NVS S+++V+ E+ + C+ I+ W L E
Sbjct: 310 SDRYHLMPIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEIN 369
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FF YK+++ + + A D L + G+ ESR RQL L +E++ G+ H P ++
Sbjct: 370 FFSRYKHFISLSMTAETEKDELAFGGFFESRIRQLVLILEKN-QGIKLAHINPKKFKAAK 428
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
P S +F+GL+ E V + D+ + F+ I
Sbjct: 429 DP-KKSVWFIGLQFDENV-----KNLDLTKDIQQFKRNI 461
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 186/323 (57%), Gaps = 15/323 (4%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+ +L N++E+ VRSLNGCRV D+IL VPN+E FR+TLR +K WA+R+G+Y N GF+GG
Sbjct: 170 IEILRNLEEKCVRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGG 229
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS--VWDPRK 118
V WA+LVAR CQLYPNA PS L+ +FF ++++W WP PV L E+ GF+ VWDPR
Sbjct: 230 VCWAMLVARTCQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRF 289
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI--------ELNKA 170
NP DRSH MPIITPAYP NS++NVS STL VM ++ + ++I E N
Sbjct: 290 NPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTR 349
Query: 171 QWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
W+ LF FF YK+++ + A + W G VES R+L +ER+ L+
Sbjct: 350 LWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAHV 409
Query: 231 PYPNEYIDPSKPCPNSAF----FMGLR-RKEGVTGKERQQFDIRGTVDNFREEIGMYMFW 285
+ +DP++ + + F+GL + V DI+ D + + +
Sbjct: 410 NVDSIELDPAEEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISHNNY 469
Query: 286 KPGMDIYVSHVRRRQLPSFVFPD 308
P M + +V+R L F+ P+
Sbjct: 470 TPDMRVEARYVKRHNLVKFLTPE 492
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 153/231 (66%), Gaps = 1/231 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L V+E+ + SLNG RV DQIL+ VPN F+ LR +KFWA+RR +Y+NV GF GGV
Sbjct: 174 NLLKGVEERCILSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA++VAR+CQLYPNA+ +++VS+FFR+ +QW WP PV+L PI++ L VW+P+ P
Sbjct: 234 AWAMMVARICQLYPNAVSAVIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPS 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D++H MPIITPAYP M +++N++ ST V+ + I ++I K WSALFE + F
Sbjct: 294 DKAHRMPIITPAYPSMCATHNITPSTQTVILREMARAGLIVDDIMAGKKPWSALFEKHDF 353
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F Y+ YL V + AD L W G VES+ R ++E + + HP+
Sbjct: 354 FHRYRYYLTVTAASKTADSQLKWSGLVESKLRHFVTRLEL-VDAITLAHPF 403
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 143/193 (74%), Gaps = 1/193 (0%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN++ FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKY 368
Query: 186 KNYLQVDIVAADA 198
K Y+ +++A A
Sbjct: 369 K-YVFYNLLAMFA 380
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 159/232 (68%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIIFRIALRAIKLWAQRRAVYGNVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++ ++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F+ G +I +I NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILKEFERGMKITNDIFSNKLTWNDLFKKHTF 354
Query: 182 FEAYKNYLQVDIVAADAD-DLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL + D D L W G VES+ R L LK+E G+ HPY
Sbjct: 355 FYDYKFYLTITTATKGTDEDHLKWSGLVESKVRLLILKLEA-LPGITLTHPY 405
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/228 (51%), Positives = 157/228 (68%), Gaps = 1/228 (0%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+D++ +RSLNG RV D IL+ VPNVE FR+ LRC+K WA +R +YSNV GF GGV WA
Sbjct: 196 KNLDDRCIRSLNGSRVTDDILRLVPNVETFRIALRCIKLWALQRAIYSNVMGFFGGVAWA 255
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
+L+ARVCQLYP A +VS+FF++ +W WP PV+L PIEE L VW+P+ P+D++
Sbjct: 256 ILIARVCQLYPCAAAGEVVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKA 315
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP M S++NV++ST V T++F+ ++I L + +W+ LF+ FF
Sbjct: 316 HRMPIITPAYPSMCSTHNVTVSTQTVTTQEFERAAVTTDKIMLGREKWTVLFQKNDFFHR 375
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
YK YLQV + D + L W G+VESR RQL +K+E N L HPY
Sbjct: 376 YKYYLQVIASSNDDEKQLMWAGFVESRLRQLVMKLELAEN-LDIAHPY 422
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 143/193 (74%), Gaps = 1/193 (0%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN++ FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR H
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 308
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L KA+WS LF+ FF+ Y
Sbjct: 309 LMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKY 368
Query: 186 KNYLQVDIVAADA 198
K Y+ +++A A
Sbjct: 369 K-YVFYNLLAMFA 380
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 159/232 (68%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR +Y+NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++ ++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ + G RI +I NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILGELGRGIRITNDIFTNKKTWADLFQRHTF 354
Query: 182 FEAYKNYLQVDIVA-ADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL V D++ L W G VES+ R L LK+E T G+ HPY
Sbjct: 355 FHEYKFYLTVMAATNGDSEQHLKWSGMVESKVRLLVLKLEALT-GIKIAHPY 405
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 161/232 (69%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR +Y+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAIYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++ ++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ E+F G ++ +I NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILEEFARGIQVTNDIFSNKGTWADLFQKHDF 354
Query: 182 FEAYKNYLQVDIVAADAD-DLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL + + +D + L W G VES+ R L LK+E G+ HP+
Sbjct: 355 FYKYKFYLTITVSTKGSDEEHLKWSGLVESKTRLLVLKLEA-LAGIKLAHPF 405
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 137/187 (73%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + +RSLNGCRV D+IL VPN+E+FR+TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR P D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS+YNVS ST +M E+F+ G I +EI NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 EAYKNYL 189
+ YK L
Sbjct: 368 QKYKYVL 374
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 155/238 (65%), Gaps = 2/238 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL VP F+ LRC+K WA++R +Y+N+ GF GGV
Sbjct: 174 NLLRNLDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPNA+ +++V +FF +Y+QW WP PV+L IE+ L VW+PR P
Sbjct: 234 AWAMLTARICQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST ++ +F+ G I +I + K +W LF + F
Sbjct: 294 DRSHRMPVITPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEF 353
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F YK YL V A++ L W G VES+ R L K+E T G+ HPY + D
Sbjct: 354 FFRYKFYLCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 137/187 (73%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + +RSLNGCRV D+IL VPN+E+FR+TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR P D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS+YNVS ST +M E+F+ G I +EI NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 EAYKNYL 189
+ YK L
Sbjct: 368 QKYKYVL 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 137/187 (73%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + +RSLNGCRV D+IL VPN+E+FR+TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR P D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS+YNVS ST +M E+F+ G I +EI NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 EAYKNYL 189
+ YK L
Sbjct: 368 QKYKYVL 374
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 159/232 (68%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+TLR +K WA+RR +Y+NV GF GGV
Sbjct: 175 NLLRNLDEKELRALNGTRVTDEILELVPKPNVFRITLRAIKLWAQRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF+++++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST ++ ++F G ++ +I NK W LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKTIILKEFARGVQVTNDIFSNKGNWGDLFKKHTF 354
Query: 182 FEAYKNYLQVDIVAADAD-DLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL + D + L W G VES+ R L LK+E G+ HPY
Sbjct: 355 FYEYKFYLTITASTRGTDEEHLKWSGLVESKLRLLILKLEA-LPGINLAHPY 405
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 137/187 (73%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + +RSLNGCRV D+IL VPN+E+FR+TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR P D
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSD 307
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS+YNVS ST +M E+F+ G I +EI NKA WS LFE FF
Sbjct: 308 RYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFF 367
Query: 183 EAYKNYL 189
+ YK L
Sbjct: 368 QKYKYVL 374
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 157/236 (66%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F++ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILQLVPKPTSFKIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + T+W WP PV+L PIE+ L VW+PR +
Sbjct: 235 AWAMLVARICQLYPNACSAVILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N+S ST +V+ + + G +I EI NK WS LF+ + F
Sbjct: 295 DRSHKMPVITPAYPSMCATHNISESTKKVILAELERGAQISSEIFSNKKTWSDLFQKHDF 354
Query: 182 FEAYKNYLQV-DIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V + ++ L W G VES+ R L K+E G+ HP+ +
Sbjct: 355 FYKYKFYLTVMASTSGSSEQHLKWSGLVESKLRLLVQKLET-LGGINLAHPFTKPF 409
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 183/311 (58%), Gaps = 35/311 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D+++VRSLNGCRVA+Q+LK VP + F +TLR +K WAK G+YSN GF GG+
Sbjct: 179 NLLRNLDQESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGI 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-----LGFSVWDP 116
WA+LVAR CQLYPNA PS LV R F +++ W WP+PV+L + D L VWDP
Sbjct: 239 TWAILVARACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDP 298
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF 176
R+ DR H MPIITPA+P NS++NV+ ST V+ + IC +I K++W+ALF
Sbjct: 299 RRKNTDRFHVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALF 358
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
E FF YK+++ + + A + ++ L + G++ESR R L +ER+ + ++ H PN++
Sbjct: 359 EEVNFFSRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQD-IIIAHNDPNKH 417
Query: 237 IDPSKPCPNSAF------------FMGLRRKEGV-------------TGKERQQFDIRGT 271
KP PN+ F F+GL E T E Q +++G
Sbjct: 418 ----KPSPNAKFDVNPENKRVTVWFIGLEFAEHAKTLDLTNEIQRFKTNVELQASNVKGI 473
Query: 272 VDNFREEIGMY 282
N + +I M+
Sbjct: 474 GPNCQVQIDMF 484
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 155/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA++R VY NV GF GGV
Sbjct: 174 NLLKNIDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPNA+ + +V +FF +YT+W WP PV+L PIE+ L VW+PR P
Sbjct: 234 AWAMLTARICQLYPNAVGATIVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ ++ + G I + + W+ LFE + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVIMKELERGAEIMSLVASGEKTWADLFERHSF 353
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V AD ++ W G +ES+ R L K+E T+G+ HPY ++
Sbjct: 354 FHDYKFYLCIVAATLADDEEHHKWSGMIESKLRILVQKLEV-TDGIALAHPYVKDF 408
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 156/238 (65%), Gaps = 6/238 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L NVD++ +R+LNG RV D IL+ VPN F+ LR +K WA+ R VY N+ GF GGV
Sbjct: 173 NLLRNVDDKDLRALNGTRVTDDILRLVPNKTVFKHALRVIKIWAQNRAVYGNIMGFPGGV 232
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
W +LVARVCQLYPNA+ ++++SRFF V +WRWP PV+L IE+ L VW+PR +
Sbjct: 233 QWGILVARVCQLYPNAVAAVILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQ 292
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ ST +V+ + + G +I EI L + WSALFE + F
Sbjct: 293 DKLHRMPIITPAYPSMCATHNITASTQKVILRELERGGQILNEIMLGQKPWSALFEKHHF 352
Query: 182 FEAYKNYLQVDIVAAD---ADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL IVAA A+ L W G+VES+ R L K+E + + HPY +
Sbjct: 353 FSDYKYYLS--IVAASKGTAEQQLKWSGFVESKLRHLVQKLEL-LDSIELAHPYVKTF 407
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 176/278 (63%), Gaps = 3/278 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E T G+ HP+ + + S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLT-GIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
CP + ++ K G E ++ D +EE
Sbjct: 413 YCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEE 450
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 176/278 (63%), Gaps = 3/278 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
CP + ++ K G E+ ++ D +EE
Sbjct: 413 YCCPTEDDYEMIQDKYGSHKTEKALNALKLVTDENKEE 450
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 197/363 (54%), Gaps = 52/363 (14%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F+ LRC+K WA+ R VY NV GF GGV
Sbjct: 174 NLLRNLDERDMRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQARAVYGNVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA++VAR+CQLYPNA+ +++V +FF +YT+W WP PV+L PIE+ L VW+PR
Sbjct: 234 AWAMMVARICQLYPNAVGAVIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTN 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP M +++N++ ST +V+ + G I +I+L K WS LF+ + F
Sbjct: 294 DRNHRMPIITPAYPSMCATHNITSSTQKVILSELVKGVDIVGDIKLGKRTWSDLFQRHDF 353
Query: 182 FEAYKNYLQVDI-VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID-- 238
F YK YL + + A+ ++ W G+VES+ R L K+E T+G+ HPY ++ D
Sbjct: 354 FFRYKFYLCIVVGTKANEEEHSKWSGFVESKLRLLVQKLEA-TSGIEIAHPYVKDFNDSY 412
Query: 239 -------------------------------------------PSKPCPNSAFFMG---- 251
P+K F+G
Sbjct: 413 DINDLEPFEVVNSYGILSGASVLNKLQKVEPRTIHGSEKEGDTPTKTLHLMKLFIGLDVS 472
Query: 252 LRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMD-IYVSHVRRRQLPSFVFPDGY 310
L + T K+ ++ DI+ F ++ ++ G I + +V+ +LP VF +G
Sbjct: 473 LNKSNDSTSKQPKKLDIQYPCSEFYNICKGWLGFQEGTHFIQIKNVKLYELPDDVFEEGE 532
Query: 311 KRP 313
KRP
Sbjct: 533 KRP 535
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 159/236 (67%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L NVDE+ +R+LNG RV D+IL+ VPN F++ LR +K WAKRR VY+NV GF GGV
Sbjct: 175 NLLRNVDEKDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+ V R+CQLYPNA ++++S+FF++ ++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMFVVRICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N+S ST +V+ + Q G + ++I N+ W LF+ + F
Sbjct: 295 DRSHKMPVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEDLFKKHDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V + +D+ L W G+VES+ R L K+E G+ HP+ Y
Sbjct: 355 FFKYKFYLTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLEV-LPGINLAHPFIEPY 409
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 153/444 (34%), Positives = 224/444 (50%), Gaps = 76/444 (17%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F++ LR +K WA+RR VY+NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPTAFKIALRAIKLWAQRRAVYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++V+RFF + T+W WP PV+L PIE+ L VW+P+
Sbjct: 235 AWAMLVARICQLYPNACSAVIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYAN 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M S++N+ ST +V+ + Q G + +I NK W LF+ + F
Sbjct: 295 DRLHKMPVITPAYPSMCSTHNICESTKKVILNELQRGVEVTTDIFTNKKTWGDLFQKHDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL V +D+ L W G VES+ R L LK+E +G+ HPY +
Sbjct: 355 FYKYKFYLTVMASTKGSDEQHLKWSGLVESKLRLLVLKLEV-LSGINLAHPY-------T 406
Query: 241 KPCPNSAFFMG-------------------LRRKEGVTGKERQQFDIRGT----VDNFRE 277
KP ++ + L++ VT + + ++G +
Sbjct: 407 KPFESTYAYKTEEQYKEIFDNYGTHKTEDVLKKYTEVTNENKDDESLKGMEKVHITTMYI 466
Query: 278 EIGMYMFWKPGMDIYV-------------------------SHVRRRQLPSFVFPDGYKR 312
+ + + K +DI+V +V+ LP V+ +G +R
Sbjct: 467 GLNIAVDEKKKIDIHVPCQEFFNLCRSFQEYEDTETFSLVIKYVKLYDLPDHVYDEGEQR 526
Query: 313 PRPS--RHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASISSEVPQ 370
P + + NE+AGK + K S L + E D ++ S SE PQ
Sbjct: 527 PVKASKKRKNEKAGKKAKRPK------SSSVLAADAE--------DSTMADGSTVSEEPQ 572
Query: 371 PVSPGKTTGDSTNDSEVMS--AGG 392
P TT STN +S AGG
Sbjct: 573 P-PLSNTTAPSTNTGAELSVAAGG 595
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 206/413 (49%), Gaps = 64/413 (15%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D++ VRSLNG R D IL+ VPNV FR LR +K+WA+RR +YSNV+GFLGG+
Sbjct: 176 SLLKNLDDKCVRSLNGSRSTDAILRLVPNVHVFRDALRAIKYWAQRRAIYSNVSGFLGGI 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WALLVARVCQLYPN + +V RFF + + W+WP PV+L IEE L VW+P+ P
Sbjct: 236 AWALLVARVCQLYPNGNAATIVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPS 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP M S++NV T ++ E+ + G + I +A+W+ LF + F
Sbjct: 296 DRAHKMPIITPAYPSMCSTHNVMNCTFEIIQEELKRGQELIVRITNGEAKWADLFTKHTF 355
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----- 236
F Y+ YLQ+ D + W VES+ RQL K+E ++ L + HP+ +
Sbjct: 356 FSQYQYYLQIIASCDDEEIQKKWSKTVESKGRQLVGKLE-ESGTLARVHPFVKGFNKTYY 414
Query: 237 --------------IDPS-----------------KPCPNSAFFMGL---RRKEGVTGKE 262
+ P+ + + F++G+ R VT
Sbjct: 415 TVTMQEHADIVLGNVPPAVANRTEEEAKQIESNERQVIHTTTFYIGMEITRPPPSVTTTG 474
Query: 263 RQQFDIRGTVDNFREEIGMYMFWKPG-MDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNE 321
++ DI F + + ++ M I V H++ LP VF +G RPR
Sbjct: 475 PRKLDISIPTSEFMKTARSWELYQNDIMGIAVRHIKNSALPDEVF-EGAPRPR------- 526
Query: 322 QAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASISSEVPQPVSP 374
+ K K+ G + KR +R S + P PV+P
Sbjct: 527 KGLKRVAKSKVPIDGEGAQATKR---------------RRPSDDGQTPTPVNP 564
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 154/238 (64%), Gaps = 2/238 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL VP F+ LRC+K WA++R +Y+N+ GF GGV
Sbjct: 174 NLLRNLDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPNA+ +++V +FF +Y+QW WP PV+L IE+ L VW+PR P
Sbjct: 234 AWAMLTARICQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST ++ +F+ G I +I + K +W LF + F
Sbjct: 294 DRLHRMPVITPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEF 353
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F YK YL V A++ L W G VES+ R L K+E T G+ HPY + D
Sbjct: 354 FFRYKFYLCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 161/234 (68%), Gaps = 6/234 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R++NG RV D+IL+ VP FR+ LR +K WA RR +Y+NV GF GGV
Sbjct: 175 NLLRNLDEKDLRAINGTRVTDEILELVPKPNVFRIALRAVKIWAPRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++ +W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F+ G ++ +I NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITDSTKKVILQEFERGVQVTNDIFTNKKTWADLFKKHEF 354
Query: 182 FEAYKNYLQVDIVAA---DADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL V VA+ + L W G+VES+ R L LK+E G+ HPY
Sbjct: 355 FHKYKFYLTV--VASTRGSTEQHLKWSGFVESKLRLLVLKLE-TLAGIKLAHPY 405
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 175/278 (62%), Gaps = 3/278 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
CP + ++ K G E ++ D +EE
Sbjct: 413 YCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEE 450
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 156/232 (67%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++ ++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ ++F+ G I I NKA W LF+ + F
Sbjct: 295 DRCHRMPVITPAYPSMCATHNITESTKKVILKEFERGVEITNNIFSNKATWEDLFKRHTF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL V D+ L W G VES+ R L LK+E G+ HPY
Sbjct: 355 FHDYKFYLTVTASTKGNDEQHLKWSGLVESKVRLLILKLEA-LPGIKSAHPY 405
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 172/295 (58%), Gaps = 49/295 (16%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE TVRSLNG RVAD IL VP+ +HFR TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 263 ILKNLDEVTVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGIS 322
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE----DEL-GFSVWDPR 117
WALL A++CQLYPN S L+ +FFRVY+ W W PV++ I + D L FSVWDP
Sbjct: 323 WALLTAKICQLYPNYNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPE 382
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELN--------- 168
KN +D+ H MPIITPA+PCMNS++NV+ T ++ ++F+ + I +E N
Sbjct: 383 KNIKDKLHVMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVM 442
Query: 169 ----------------------------KAQWSALFEPYLFFEAYKNYLQVDIVAADADD 200
+ W+ + +P F +YK++L + I+A +
Sbjct: 443 NQANGIVTPVSAPTTSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELI 502
Query: 201 LLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI---DPSKPCPNSAFFMGL 252
+WKGW+ES+ R L K+E T L+ PYP Y+ D C S+FF+GL
Sbjct: 503 YNSWKGWIESKIRLLFKKLE--TINELKIRPYPKFYVYKKDKFYYC--SSFFIGL 553
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 147/218 (67%), Gaps = 2/218 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE ++RSLNG RVAD IL+ VPN+E FR LRC+K WA R+ +YSN+ GFLGGV
Sbjct: 180 ILWGLDEYSIRSLNGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVA 239
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE--LGFSVWDPRKNP 120
WA+LVARVCQLYP+A S +V FF++ W WP+PVML +E+ W+P+ NP
Sbjct: 240 WAILVARVCQLYPHASASTVVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNP 299
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DRSH MPIITP+YP M S++NV ST R++ + + I ++I A W+ LF+ +
Sbjct: 300 TDRSHRMPIITPSYPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSATWARLFQSHN 359
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLK 218
FFE Y YLQ+ +VA + + L W G VE+R RQL L+
Sbjct: 360 FFEIYMQYLQITVVADNYNLQLKWAGLVEARLRQLLLE 397
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 176/278 (63%), Gaps = 3/278 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F+ G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 355 FYRYKFYLEITAYTRGSDEQHLKWGGLVESKVRLLIMKLEV-LAGIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
CP + ++ K G E ++ D +E+
Sbjct: 413 YCCPTEDDYEMIQDKYGSHKTEAALKALKQVTDENKED 450
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 155/236 (65%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA+ R VY NV GF GGV
Sbjct: 173 NLLKNLDERDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGV 232
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPNA+ S++V +FF +YT+W WP PV+L IE+ L VW+PR
Sbjct: 233 AWAMLTARICQLYPNAVSSVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAH 292
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ ++ G + + I + WS LFE + F
Sbjct: 293 DRLHRMPVITPAYPSMCATHNITSSTQKVIIQELLRGASVMKSIFEGEKTWSDLFERHNF 352
Query: 182 FEAYKNYLQVDIVAAD-ADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F Y+ YL V D A++ W G+VES+ RQL LK+E T G+ HPY ++
Sbjct: 353 FHRYRFYLCVVAATVDSAEEHHKWHGFVESKLRQLVLKLE-STEGIEIAHPYVKDF 407
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 169/257 (65%), Gaps = 3/257 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F+ G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEG 257
CP + ++ K G
Sbjct: 413 YCCPTEDDYEMIQDKYG 429
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 169/288 (58%), Gaps = 42/288 (14%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE TVRSLNG RVAD IL VP+ +HFR TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 260 ILKNLDEVTVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGIS 319
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE----DEL-GFSVWDPR 117
WALL A++CQLYPN S L+ +FFRVY+ W W PV++ I + D L FSVWDP
Sbjct: 320 WALLTAKICQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPE 379
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ------ 171
KN +D+ H MPIITPA+PCMNS++NV+ T ++ ++F+ + I +E+N
Sbjct: 380 KNIKDKLHVMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVM 439
Query: 172 ------------------------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGW 207
W+ + +P F YK++L + I+A +WKGW
Sbjct: 440 NQANGVVTPVSAPSSSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGW 499
Query: 208 VESRFRQLTLKIERDTNGLLQCHPYPNEYI---DPSKPCPNSAFFMGL 252
+ES+ R L K+E T L+ PYP Y+ D C S+FF+ L
Sbjct: 500 IESKIRLLFKKLE--TINELKIRPYPKFYVYQKDKFDYC--SSFFIAL 543
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 175/278 (62%), Gaps = 3/278 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
CP + ++ K G E ++ D +EE
Sbjct: 413 YCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEE 450
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 175/278 (62%), Gaps = 3/278 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
CP + ++ K G E ++ D +EE
Sbjct: 413 YCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEE 450
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 175/278 (62%), Gaps = 3/278 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
CP + ++ K G E ++ D +EE
Sbjct: 413 YCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEE 450
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 180/310 (58%), Gaps = 20/310 (6%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRR-GVYSNVTGFLGGV 61
+L N+D + +RSLNGCRV D+IL VPN E FR+TLR +KFWAKR+ GVYSNV GFLGGV
Sbjct: 378 LLRNLDVKCIRSLNGCRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGV 437
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML----CPIEEDELGFS--VWD 115
+WA+LVAR CQLYP A P++LV++ WP PV+L +GF +WD
Sbjct: 438 SWAMLVARTCQLYPRAAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWD 489
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSAL 175
PR DR H MPIITPA+P NS++NVS +T ++ + G + E+ W L
Sbjct: 490 PRVKQSDRYHLMPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLVSTEVICKGLSWPKL 549
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE 235
FEP FF YK+Y+ + AA DL+TW G VES+ R L + E +T G+L H P +
Sbjct: 550 FEPSNFFVKYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFEHNT-GVLLAHVNPEQ 608
Query: 236 Y--IDPSKPCPNSAFFMGLR-RKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDI 291
+ ++ S + +GL KEG+ K DI+ VD+ + W+ GM +
Sbjct: 609 FSPLEEHGDGVESFWVVGLEMNKEGIGAKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKV 668
Query: 292 YVSHVRRRQL 301
+ RRR+L
Sbjct: 669 EAKYRRRREL 678
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 236 bits (601), Expect = 3e-59, Method: Composition-based stats.
Identities = 114/242 (47%), Positives = 173/242 (71%), Gaps = 11/242 (4%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILK--HVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+L ++DE++ RS NGCRVA+ +++ ++ N E+F++TL+C+K WA RG+YSN+ G+L G
Sbjct: 1281 MLLSMDERSYRSFNGCRVAEWLIRKDNIQNYENFKITLKCIKLWATNRGIYSNIIGYLSG 1340
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEED----ELGFSVWD 115
+ W +LVA++CQLYPN P+ L+ RFF +Y+ W+W + PV + I+ED +L W
Sbjct: 1341 IGWTILVAKICQLYPNYPPNQLIERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWR 1400
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSAL 175
P RDR+ M IITP +PCMN+++NVS +TLR++ EQ Q+GNRI +I+ N+ +S L
Sbjct: 1401 PEF--RDRNSMM-IITPCFPCMNTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEKTFSDL 1457
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDT-NGLLQCHPYPN 234
F+P+ FF+ YK++LQ++IVA + +D + WKG VESR R+LT E+ N L+Q HPYPN
Sbjct: 1458 FKPFNFFKRYKHFLQINIVATNKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPN 1517
Query: 235 EY 236
+
Sbjct: 1518 PF 1519
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 187/359 (52%), Gaps = 40/359 (11%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS+ST V+ + Q G I ++I L + +W LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP--------- 233
+ YK YL + + + W G VES+ R L ++R + HP+P
Sbjct: 362 KDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGFERVHRV 420
Query: 234 ----------------------NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGT 271
E D K + A V E + D
Sbjct: 421 SSEEEIEAVKTGSTKYQDKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHV 480
Query: 272 VDNFREEIGMYM-----FWKPGM-DIYVSHVRRRQLPSFVFPDGYKRP-RPSRHFNEQA 323
+ IG+ + ++PG+ D+ ++HVR LP VF G RP RP + ++A
Sbjct: 481 MYTTTYYIGLELKPLEPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKKKIVKKA 539
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL VDEQTVRSLNGCRVADQILK VPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGV
Sbjct: 172 SVLYEVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGV 231
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC IEED+LGF VWDPR
Sbjct: 232 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 175/278 (62%), Gaps = 3/278 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 171 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 230
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 231 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 290
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ ++F G +I +I NK W+ LFE F
Sbjct: 291 DRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 350
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 351 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESS 408
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREE 278
CP + ++ K G E ++ D +EE
Sbjct: 409 YCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEE 446
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 154/234 (65%), Gaps = 6/234 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL VP F+ LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLRNIDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +Y QW WP PV+L IE+ L VW+PR P
Sbjct: 234 AWAMLVARICQLYPNAVSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ ++F+ G I +I N W+ L + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQISGNNKTWANLLARHTF 353
Query: 182 FEAYKNYLQVDIVAADA---DDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL IVAA ++ + W G VESR R L K+E T G+ HPY
Sbjct: 354 FHNYKFYLC--IVAATKGSYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 195/355 (54%), Gaps = 49/355 (13%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA+ R VY NV GF GGV
Sbjct: 173 NLLKNLDERDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGV 232
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPNA+ +++V +FF +YT+W WP PV+L IE+ L VW+PR
Sbjct: 233 AWAMLTARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAH 292
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ ++ G+ I + I + WS LF + F
Sbjct: 293 DRQHRMPVITPAYPSMCATHNITSSTQKVILQELTRGSNIMKSILEGEKSWSDLFARHDF 352
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY----PNEY 236
F Y+ YL V + A++ W G+VES+ RQL +K+E T G+ HPY N Y
Sbjct: 353 FHRYRFYLCVVAATSESAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDFSNAY 411
Query: 237 I--------------------------------DPSKPCPNSAFFMGL-----RRKEGVT 259
+ + +K + +++GL +R EGV
Sbjct: 412 VLNDNNPNDVVNAYGSFSGQNLINSLEVLKNEGEENKVIRLTKYYIGLELNLDKRTEGV- 470
Query: 260 GKERQQFDIRGTVDNFREEIGMYMFWKPGMD-IYVSHVRRRQLPSFVFPDGYKRP 313
++ DI+ +F + +K G+ I++ +V+ LP V+ D RP
Sbjct: 471 ----RKLDIQQPCADFYSICKSFASYKDGITFIHIKNVKLSDLPDDVYLDNETRP 521
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 204/392 (52%), Gaps = 57/392 (14%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + RSLNG RV D IL VP+V FR LR ++ WAKRRG+YSNV GF GGV
Sbjct: 179 ILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 238
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRKNP 120
WALL AR+CQLYP A P+ +V +FF +Y QW WP PV+L I+ + SVW+P+ +
Sbjct: 239 WALLTARICQLYPAAAPATIVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDR 298
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI-ELNKAQWSALFEPY 179
RD++H MP+ITPAYP M S++N++ ST+ ++ ++ +I +EI + + W LFE
Sbjct: 299 RDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPGSSWIPLFEKV 358
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
FF YK Y+QV A+ +D + W G VESR R L +E +T+ ++ HP
Sbjct: 359 DFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV--- 414
Query: 240 SKPCPNSAFF------------------MGLRRKEGVTGKERQQ-----FDIRGTVDNFR 276
N F+ M R +E V GKE ++ F I ++
Sbjct: 415 -----NRVFYCLTEEEQAAASQGELTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKS 469
Query: 277 EEIG---MYMFWKPG----------------MDIYVSHVRRRQLPSFVFPDGYKRPRPSR 317
+E G + +F+ M + + +R +LP +VFPDG + +
Sbjct: 470 KESGGRVLNLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPPYVFPDGMPKSKKKT 529
Query: 318 HFNEQAGKPCEDVKMCQSGSSGRHLKREKEHE 349
+Q G ED M GS G+ + + E
Sbjct: 530 KRQQQNG--SEDAGM-NDGSEGQGPSKRTKSE 558
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 155/244 (63%), Gaps = 6/244 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL VP F+ LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLKNLDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPN + +++V +FF++Y+QW WP PV+L IE+ L VW+PR P
Sbjct: 234 AWAMLVARICQLYPNTVSAVIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST V+ +F G + +I A W LFE + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITKSTKDVIMSEFNRGVNVMAQIHAGTASWGLLFERHRF 353
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY----PNEY 236
F YK YL V + + + L W G +ES+ R L K+E T G+ HPY N Y
Sbjct: 354 FFQYKFYLCIVAATKSSSAEHLKWSGMIESKVRLLVQKLEL-TEGITLAHPYVKPFENSY 412
Query: 237 IDPS 240
+ S
Sbjct: 413 VGTS 416
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 189/318 (59%), Gaps = 20/318 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF + ++W WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ T +V+ ++F G +I +I NK W+ LFE F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITECTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F YK YL++ +D+ L W G VES+ R L +K+E G+ HP+ + + S
Sbjct: 355 FFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESS 412
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIG-----------MYMFWKPGM 289
CP + ++ K G E ++ D +EE MY+ G+
Sbjct: 413 YCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYI----GL 468
Query: 290 DIYVSHVRRRQLPSFVFP 307
D + + R++ +F FP
Sbjct: 469 DFNIENKRKKL--TFTFP 484
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 154/234 (65%), Gaps = 6/234 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL VP F+ LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLRNIDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +Y QW WP PV+L IE+ L VW+PR P
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPH 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ ++F+ G I +I N W+ L + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQINGNNKTWANLLARHTF 353
Query: 182 FEAYKNYLQVDIVAADA---DDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL IVAA ++ + W G VESR R L K+E T G+ HPY
Sbjct: 354 FHNYKFYLC--IVAATKGPYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 159/232 (68%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L NVDE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+ R VY+NV GF GGV
Sbjct: 175 NLLRNVDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQNRAVYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++ ++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST +V+ E+F G +I +I +K WS LF + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITDSTKKVILEEFSRGIQITNDIFSSKKSWSDLFNKHEF 354
Query: 182 FEAYKNYLQVDIVAADAD-DLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL + +D + L W G VES+ R L LK+E +G+ HP+
Sbjct: 355 FYKYKFYLTITASTRASDEEHLKWSGLVESKVRLLVLKLEA-LSGIKIAHPF 405
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 167/282 (59%), Gaps = 36/282 (12%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE TVRSLNG RVAD IL VPN ++FR TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 252 ILKNLDEVTVRSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGIS 311
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDEL----GFSVWDPRK 118
WALL A++CQLYPN S L+ +FF+VY+ W W PV+L I++ + F VWDP K
Sbjct: 312 WALLTAKICQLYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEK 371
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG----------NRICEEIELN 168
N +D+ H MPIITPA+PCMNS++NV+ T ++ E+F+ N I I +N
Sbjct: 372 NIKDKLHIMPIITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMN 431
Query: 169 K---------------AQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFR 213
K W + EP F YK++L + I+ + +WKGW+ES+ R
Sbjct: 432 KLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIR 491
Query: 214 QLTLKIERDTNGLLQCHPYPNEYI---DPSKPCPNSAFFMGL 252
L K+E T L+ P+P Y + S C S+FF+ L
Sbjct: 492 LLFKKLE--TINELKIRPFPKFYFYKKEKSYYC--SSFFIAL 529
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/252 (45%), Positives = 166/252 (65%), Gaps = 10/252 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D+++VRSLNGCRVA+Q+LK VP ++ + LR +K WAK G+YSN GF GG+
Sbjct: 177 SLLKNLDQESVRSLNGCRVAEQLLKLVPRQNNYCVALRAIKLWAKNHGIYSNSMGFFGGI 236
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPI--EEDELGF---SVWDP 116
+WA+L+AR CQLYPNA PS LV R F ++ W WP+PV+L + E ++G VWDP
Sbjct: 237 SWAILIARACQLYPNASPSRLVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDP 296
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF 176
R+ DR H MPIITPA+P NS++NV+ ST++V+ + G IC +I K W ALF
Sbjct: 297 RRKSTDRFHLMPIITPAFPQQNSTHNVTRSTMQVIRTEICEGLEICRDISEGKCGWDALF 356
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ FF YK+Y+ + + A + ++ L + G++ESR R L +ER+ + ++ H PN++
Sbjct: 357 KEVNFFSRYKHYIALLMAAPNEEEELNYGGFLESRIRLLVQSLERNQD-IVIAHNDPNKH 415
Query: 237 IDPSKPCPNSAF 248
KP PN+ F
Sbjct: 416 ----KPSPNAKF 423
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 156/232 (67%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA RR +Y+NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWANRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++ ++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNATSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST RV+ ++ + G I +I NK WS LF + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKRVILQELENGISITNDIFSNKKTWSDLFTKHNF 354
Query: 182 FEAYKNYLQVDIVAADADDL-LTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL V D+ L W G VES+ R L LK+E G+ HP+
Sbjct: 355 FYKYKFYLTVMASTRGTDEENLKWSGMVESKVRLLVLKLEA-LPGIKLAHPF 405
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 151/234 (64%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D++ VRSLNG RV DQIL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDDKEVRSLNGTRVTDQILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ T+W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+SLST V+ + Q G I ++I + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDIVDKIFAKQLTWNDLFTRHTFFS 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YLQ+ + + W G VES+ R L ++R N + HP+P +
Sbjct: 362 KDYKYYLQITASSKTKEADSVWSGLVESKLRHLVGALDRK-NIIAVAHPFPKGF 414
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 188/325 (57%), Gaps = 6/325 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMT-LRCLKFWAKRRGVYSNVTGFLGGV 61
+L +D++ VRSLNGCRV +IL+ V N+E+FR+T L+ +K AK G+YSNV G+LG V
Sbjct: 59 LLKYLDQKCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVV 118
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA P+ L+ +FF +++ W WP PV+L +++ LG VWDPR N
Sbjct: 119 SWAILVARTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNAS 178
Query: 122 DRS--HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
DR H MPIITPAYP NS++NV++ST +M E + I ++I + KA W LFEP
Sbjct: 179 DRPPYHLMPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKASWDKLFEPS 238
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY--I 237
FF+ K+++ + + + W G++ES+ R L +R+ N + H P + +
Sbjct: 239 NFFDEXKHFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRNPN-ITFAHINPKSFPPL 297
Query: 238 DPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVR 297
P + + +GL ++ DI+ + ++ +K GM +VR
Sbjct: 298 KPEEDEHGCMWLIGLTFRKAEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYVR 357
Query: 298 RRQLPSFVFPDGYKRPRPSRHFNEQ 322
R+ L +++ + KR R + +Q
Sbjct: 358 RKNLSNYIAANQIKRGRKTSSSTQQ 382
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 181/314 (57%), Gaps = 15/314 (4%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+ + VRS+NGCRVA IL VP +FR TLR +K WA RR +YS V G+LGGV
Sbjct: 183 ILRNMSDSNVRSINGCRVASFILDSVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVA 242
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-----LGFSVWDPR 117
WA+L ARVCQ+YPN P+ L+ +FF+V++ W W PV LC I+ + + F VWDP
Sbjct: 243 WAILTARVCQMYPNFAPNRLIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPT 302
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSALF 176
+ +DR H MPIITPA+P MNS++NV+ +T RV+TE+ ++ + L Q W +
Sbjct: 303 NSLQDRQHLMPIITPAFPSMNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQLWEMVL 362
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN-- 234
E F YK++L +++ + W+GW+ SR R L K+E T Q P P
Sbjct: 363 EEEDVFSKYKHFLVIEVYGSSEHAHNKWEGWIGSRMRFLIKKLE--TLEYTQIRPLPGFF 420
Query: 235 EYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM---FWKPGMDI 291
++ D +SAFF V G Q FDIR + +F+E I + +K +D+
Sbjct: 421 KFEDRDWEYASSAFFAFKHTAPVVEG--YQSFDIRMPIQSFKEIINTWCDMETFKDQIDV 478
Query: 292 YVSHVRRRQLPSFV 305
+ +++ +QLP ++
Sbjct: 479 NIRYLKSKQLPDYI 492
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 157/232 (67%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR +Y+NV GF GGV
Sbjct: 175 ALLRNLDEKDLRALNGTRVTDEILELVPKPSVFRIALRAIKIWAQRRAIYANVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++ ++W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST V+ ++ G ++ +I K W+ LF + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKAVILKELNRGIQVTNDIFAYKKTWADLFTKHDF 354
Query: 182 FEAYKNYLQVDIVA-ADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL + D ++ L W G VES+ R LTLK+E G+ HP+
Sbjct: 355 FFQYKYYLTITAATRGDDEEHLKWSGLVESKLRLLTLKLET-IPGIKLAHPF 405
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 162/270 (60%), Gaps = 37/270 (13%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE TVRSLNG RVAD IL VP+ +HFR TLR +K WAK RG+YSN+ GFLGG++
Sbjct: 265 ILKNLDEVTVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGIS 324
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE----DEL-GFSVWDPR 117
WALL A+VCQLYPN S L+ +FFRVY+ W W PV++ I + D L FSVWDP
Sbjct: 325 WALLTAKVCQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPE 384
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ------ 171
KN +D+ H MPIITPA+PCMNS++NV+ T ++ ++F+ + I +E+N
Sbjct: 385 KNIKDKLHVMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVM 444
Query: 172 ------------------------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGW 207
W+ + +P F YK++L + I+A + +WKGW
Sbjct: 445 NQANGIVTPVSTPSSNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGW 504
Query: 208 VESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
+ES+ R L K+E T L+ PYP Y+
Sbjct: 505 IESKIRLLFKKLE--TINELRIRPYPKFYV 532
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 171/299 (57%), Gaps = 53/299 (17%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE TVRSLNG RVAD IL VPN ++FR TLR +K WAKRRG+YSN+ GFLGG++
Sbjct: 251 ILKNLDEVTVRSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGIS 310
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDEL----GFSVWDPRK 118
WALL A++CQ+YPN S L+ +FFRVY+ W W PV++ I++ + F++WDP K
Sbjct: 311 WALLTAKICQIYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEK 370
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELN---------- 168
N +D+ H MPIITPA+PCMNS++NV+ T ++ E+F+ + I ++LN
Sbjct: 371 NVKDKLHIMPIITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVME 430
Query: 169 --------------------------------KAQWSALFEPYLFFEAYKNYLQVDIVAA 196
+ WS + EP+ F+ YK++L + I+
Sbjct: 431 HVNNLMSYGNAININNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGT 490
Query: 197 DADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI---DPSKPCPNSAFFMGL 252
+ WKGW+ES+ R L K+E T L+ P+P Y D C S+FF+ L
Sbjct: 491 NELIYNLWKGWIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYC--SSFFIAL 545
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 194/331 (58%), Gaps = 32/331 (9%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +VDE+T RS+NG RVAD +LK VPN E F++TLR +K WAK RG+YSNV G+LGG++
Sbjct: 286 VLRHVDEKTARSVNGSRVADLVLKLVPNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGIS 345
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEEDEL----GFSVWDPR 117
WA+LVAR CQLYPN PS L+ RFF VY+ W+W N PV+LC I+E + F +W+P+
Sbjct: 346 WAILVARCCQLYPNFAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPK 405
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK-AQWS--- 173
N +DR H +PIITPA+P MNS++NVSLST RV+T++F RI + + K W+
Sbjct: 406 VNVQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITDEFANAKRIFDVWDKKKEISWTEAL 465
Query: 174 -ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
+ +P L F ++K++L++ I A + W GWVES+ R L ++ER L C P+
Sbjct: 466 HLVLKP-LDFTSFKHFLELQIFAQNETVHRKWLGWVESKVRFLVRQLER----LAACPPF 520
Query: 233 PNEYIDPS-------KPCPNSAFFM--GLRRKEG--VTGKERQQ---FDIRGTVDNFREE 278
P +P P + F G V QQ D+R F +
Sbjct: 521 AAGGHTPKSEAAMTVRPIPCTFSFQEPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDL 580
Query: 279 IGMY---MFWKPGMDIYVSHVRRRQLPSFVF 306
I + + + + V HVRR QLP++V
Sbjct: 581 INQWPERAQLEGQIQLRVKHVRRSQLPAYVL 611
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 185/316 (58%), Gaps = 12/316 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRVA+Q+LK VPN F TLR +K WAK G+YSN GF GG+
Sbjct: 159 NILKNLDPESVRSLNGCRVAEQLLKQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGI 218
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE----DELGFSVWDPR 117
WA+LVAR CQLYPNA PS L+ + F V++ W WP+PV+L +E L VWDPR
Sbjct: 219 AWAILVARTCQLYPNAAPSKLIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPR 278
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE 177
+N DR H MPIITP++P NS++NVS STL+V+ + + +ICE ++ KA W L E
Sbjct: 279 RNYADRLHLMPIITPSFPEQNSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKATWKDLLE 338
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
FF Y++ + V I A + + G+ ESR RQL +ER++ + ++
Sbjct: 339 ETNFFCKYRHLIAVSINAEKEKEDTDFAGFFESRIRQLVQLLERNSQVQI-AQVNTRKFK 397
Query: 238 DPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG-MDIYVSHV 296
P P S +F+GL + + D+ + F++ IG K G + I ++V
Sbjct: 398 APFSPG-KSQWFIGLEFIQAA-----KNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYV 451
Query: 297 RRRQLPSFVFPDGYKR 312
++ +L +++ KR
Sbjct: 452 KKSKLITYISAAELKR 467
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 195/355 (54%), Gaps = 49/355 (13%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +RSLNG RV D+IL+ VP F+ LRC+K WA+ R VY NV GF GGV
Sbjct: 173 NLLKNLDERDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGV 232
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+L AR+CQLYPNA+ +++V +FF +YT+W WP PV+L IE+ L VW+PR
Sbjct: 233 AWAMLTARICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAH 292
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ ++ G+ I + I + WS LF + F
Sbjct: 293 DRQHRMPVITPAYPSMCATHNITSSTQKVILQELTRGSSIMKSILEGEKSWSDLFARHDF 352
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY----PNEY 236
F Y+ YL V + A++ W G+VES+ RQL +K+E T G+ HPY N Y
Sbjct: 353 FHRYRFYLCVVAATSESAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDFSNAY 411
Query: 237 I--------------------------------DPSKPCPNSAFFMGL-----RRKEGVT 259
+ + +K + +++GL +R EGV
Sbjct: 412 VLNDNNPNDVVNAYGSFLGQNLINSLEVLKNEGEENKVIRLTKYYIGLELNLDKRTEGV- 470
Query: 260 GKERQQFDIRGTVDNFREEIGMYMFWKPGMD-IYVSHVRRRQLPSFVFPDGYKRP 313
++ DI+ +F + +K G+ I++ +V+ LP V+ + RP
Sbjct: 471 ----RKLDIQQPCADFYSICKSFASYKDGITFIHIKNVKLSDLPDDVYLENETRP 521
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 205/351 (58%), Gaps = 40/351 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N D++++RSLNGCRV D IL+ VPN E FR TLR +K WAK RG+YSNV GFLGGV
Sbjct: 203 NILRNCDKESIRSLNGCRVTDSILQLVPNQESFRTTLRVIKLWAKVRGIYSNVMGFLGGV 262
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRW--PNPVMLCPIEEDE--LGFSVWDPR 117
WA+LVA +C PN P+ L++ FF+ YTQW W NP++L I+ D + F++
Sbjct: 263 AWAILVANICITCPNLEPNKLLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADL 322
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI------------ 165
++ MPIITPA+P MN+++NVS ST R M +F+ G +I E +
Sbjct: 323 FYEEKQTDLMPIITPAFPSMNATFNVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQ 382
Query: 166 ELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDT-- 223
E+N W LF+ + FF++Y +++Q+ I++ A+D W G++ES+ R+L ++E+
Sbjct: 383 EMN---WRRLFKKFNFFKSYVHFIQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNEL 439
Query: 224 -NGLLQCHPYPNEY-IDPSKPCP-NSAFFMGLRRKEGVTGKERQQFDIRGTVDNF----R 276
G ++ P+P Y ++ + P + ++ G+R K+ + + + D+ T+ F R
Sbjct: 440 KGGCMEFRPWPKSYHLENNLDFPMDDTYYFGIRIKKNESDAQ-MRIDLTDTIKIFYKKLR 498
Query: 277 EEIG-----MYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQ 322
E I M M +DI ++++RR LP + RPR +++ NEQ
Sbjct: 499 EWISVDHKLMQMIVDKLVDIKINYIRRETLPDVI------RPRGAQNLNEQ 543
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 186/336 (55%), Gaps = 28/336 (8%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+ +L N++E+ VRSLNGCRV D+IL VPN+E FR+TLR +K WA+R+G+Y N GF+GG
Sbjct: 170 IEILRNLEEKCVRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGG 229
Query: 61 VNWALLVARVC-------------QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED 107
V WA+LVAR C QLYPNA PS L+ +FF ++++W WP PV L E+
Sbjct: 230 VCWAMLVARTCQVGLSCLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDA 289
Query: 108 ELGFS--VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI 165
GF+ VWDPR NP DRSH MPIITPAYP NS++NVS STL VM ++ + ++I
Sbjct: 290 PPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQI 349
Query: 166 --------ELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTL 217
E N W+ LF FF YK+++ + A + W G VES R+L
Sbjct: 350 LQKTPNPDEPNTRLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVN 409
Query: 218 KIERDTNGLLQCHPYPNEYIDPSKPCPNSAF----FMGLR-RKEGVTGKERQQFDIRGTV 272
+ER+ L+ + +DP++ + + F+GL + V DI+
Sbjct: 410 DLERNEYILIAHVNVDSIELDPAEEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFT 469
Query: 273 DNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPD 308
D + + + P M + +V+R L F+ P+
Sbjct: 470 DLLHQAAISHNNYTPDMRVEARYVKRHNLVKFLTPE 505
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 174/284 (61%), Gaps = 14/284 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+DE++VRSLNGCRVA+Q+LK VP+ ++F +TLR +K WAK G+YSN GF GG+
Sbjct: 181 SLLKNLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGI 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED-----ELGFSVWDP 116
WA+LVAR+CQLYPNA PS L+ + F +++ W WP PV+L I D +L VWDP
Sbjct: 241 TWAILVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDP 300
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF 176
R+N DR H MPIITPA+P NS++NVS S+++V+ ++ + IC++I +W L
Sbjct: 301 RRNHADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLL 360
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY-PNE 235
E FF Y +++ + + A + L + G+ ESR RQL +E+ N ++Q P +
Sbjct: 361 EEINFFSKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEK--NQVIQVAQINPRK 418
Query: 236 YIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
+ D P S +F+GL V + D+ + F+ I
Sbjct: 419 FKDVKDP-KKSIWFIGLEFVANV-----KNVDLTSDIQQFKMNI 456
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 151/234 (64%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D++ VRSLNG RV DQIL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDDKEVRSLNGTRVTDQILELVPQQKTFRIALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ T+W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+SLST V+ + Q G + ++I + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDMVDKIFAKQLTWNDLFTRHTFFS 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YLQ+ + + W G VES+ R L ++R N + HP+P +
Sbjct: 362 KDYKYYLQITASSKTKEAESVWSGLVESKLRHLVGALDRK-NIIAIAHPFPKGF 414
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 150/234 (64%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS+ST V+ + Q G I ++I L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQMTWNDLFARHSFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + + W G VES+ R L ++R N + HP+P +
Sbjct: 362 QDYKYYLSITASSKTKEAESVWSGLVESKIRHLVGALDRK-NTIAVAHPFPKGF 414
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 188/335 (56%), Gaps = 33/335 (9%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D +++RSLNGCRVA+Q+LK VP + F LR +K WAK G+YSN GF GG++
Sbjct: 180 LLRNLDAESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGIS 239
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-----LGFSVWDPR 117
WA+L+AR CQLYPNA PS LV R F +++ W WP+PV+L +D L VWDP
Sbjct: 240 WAILIARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPE 299
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE 177
K D+ H MPIITPA+P NS++NV+ S+ +++ ++ ICE+I KA+W LFE
Sbjct: 300 KKSSDKFHLMPIITPAFPEQNSTHNVTRSSSQIIKDEIWEALEICEQINDGKAKWKDLFE 359
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
FF YK+++ + + A + ++ L++ G++ESR R L +ER+ + +L H PN++
Sbjct: 360 EVNFFSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNPDIIL-AHNDPNKH- 417
Query: 238 DPSKPCPNSAF------------FMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFW 285
KP N+ F F+GL E T D+ + F+ +
Sbjct: 418 ---KPSKNAKFDVSPENKRITVWFIGLEFSEHATS-----LDLTNEIQRFKTNFELQASS 469
Query: 286 KPGM------DIYVSHVRRRQLPSFVFPDGYKRPR 314
G+ +I + HV++R L + R R
Sbjct: 470 VKGIGPTCQVEIDMFHVKQRNLIQVISAADLSRGR 504
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 204/396 (51%), Gaps = 57/396 (14%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + RSLNG RV D IL VP+V FR LR ++ WAKRRG+YSNV GF GGV
Sbjct: 179 ILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 238
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRKNP 120
WALL AR+CQLYP A P+ ++ +FF +Y QW WP PV+L I+ + SVW+P+ +
Sbjct: 239 WALLTARICQLYPAAAPATIIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDR 298
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI-ELNKAQWSALFEPY 179
RD++H MP+ITPAYP M S++N++ ST+ ++ ++ +I +EI + + W LFE
Sbjct: 299 RDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKV 358
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
FF YK Y+QV A+ +D + W G VESR R L +E +T+ ++ HP
Sbjct: 359 DFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV--- 414
Query: 240 SKPCPNSAFF------------------MGLRRKEGVTGKERQQ-----FDIRGTVDNFR 276
N F+ M R +E V KE ++ F I ++
Sbjct: 415 -----NRLFYCLTEEEQAAASQGELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKS 469
Query: 277 EEIG---MYMFWKPG----------------MDIYVSHVRRRQLPSFVFPDGYKRPRPSR 317
+E G + +F+ M + + +R +LPS+VFPDG + +
Sbjct: 470 KETGGRVLNLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKT 529
Query: 318 HFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEV 353
+Q G D M GS G+ + + E +
Sbjct: 530 KRQQQNG--SGDAGM-NDGSEGQGPSKRTKSEQTSI 562
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 154/231 (66%), Gaps = 1/231 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L NV+E+ V SLNG RV D+IL+ VPN F+ LR +K WA++R +YSNV GF GGV
Sbjct: 230 NLLKNVEERCVLSLNGTRVTDEILRLVPNPTIFKHALRAIKLWAQQRAIYSNVMGFPGGV 289
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ ++++++FFR+ +QW+WP PV+L PIE+ L VW+P+
Sbjct: 290 AWAMLVARICQLYPNAVSAVVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKG 349
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D++H MPIITPAYP M S++N++ ST +V+ + I ++I WS LF + F
Sbjct: 350 DQAHRMPIITPAYPSMCSTHNITESTQKVIINEMNRAGDIADKILNGTLPWSTLFAKHTF 409
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL + + A+ L W G VES+ RQL L++E + + HP+
Sbjct: 410 FHQYKYYLVIVAASKSAEMQLKWSGLVESKVRQLVLRLEY-VDEIKLAHPF 459
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 177/296 (59%), Gaps = 27/296 (9%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D +++RSLNGCRVA+Q+LK VP + F LR +K WAK G+YSN GF GG++
Sbjct: 205 LLRNLDPESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGIS 264
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-----LGFSVWDPR 117
WA+L+AR CQLYPNA PS LV R F +++ W WP+PV+L + +D L +WDPR
Sbjct: 265 WAILIARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPR 324
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE 177
DR H MPIITPA+P NS++NV+ ST +++ ++ IC +I +A+WSALFE
Sbjct: 325 HKNTDRFHLMPIITPAFPEQNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRAKWSALFE 384
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
FF YK+++ + + A + ++ L++ G++ESR R L +ER+ + +L H PN++
Sbjct: 385 EVNFFSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNPDIIL-AHNDPNKH- 442
Query: 238 DPSKPCPNSAF------------FMGLRRKEGVTGKERQQFDIRGTVDNFREEIGM 281
KP N+ F F+GL E + D+ + F+ + +
Sbjct: 443 ---KPSKNAKFDVSPENKRITVWFIGLEFAEHA-----KNLDLTNEIQRFKTNVEL 490
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 170/273 (62%), Gaps = 17/273 (6%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++D+ VRSLNG RVA+ IL VPN + FR TLR +K WA+RRG+YSNV G LGGVNW
Sbjct: 177 LRHLDDAGVRSLNGVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNW 236
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELG----------FSV 113
A+LVA V Q YPNA PS+L+++FF +Y +W+WPN V L ++ + +V
Sbjct: 237 AILVAFVVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAV 296
Query: 114 WDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWS 173
W+P NPRD++H MPIITPAYP MNSSYNV +R++ E+ G RI + I L A W+
Sbjct: 297 WNPVANPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWA 356
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY- 232
LFE FF ++ Y+QVDI A A D W GW+ESR R + + D +++ +P+
Sbjct: 357 NLFERSDFFWRFELYVQVDISARSAADHRLWFGWIESRMRSFLVCL--DQIDMVEAYPFV 414
Query: 233 ---PNEYI-DPSKPCPNSAFFMGLRRKEGVTGK 261
PN Y+ + ++FF+GL E G+
Sbjct: 415 NPLPNPYLTNAETGAVGNSFFIGLGFPEVANGR 447
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 191/335 (57%), Gaps = 40/335 (11%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +VDE+T RS+NG RVAD ILK VPN E F++TLR +K WAK RG+YSNV G+LGGV+
Sbjct: 364 VLRHVDEKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVS 423
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEE---DELG-FSVWDPR 117
WA+LVAR CQLYPN PS LV RFF VY+ W W N PV+LC I+E D L F VW+P+
Sbjct: 424 WAILVARCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPK 483
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICE----EIELNKAQWS 173
N +DR H +PIITPA+P MNS++NVSLST RV+TE+F RI + + E++ +
Sbjct: 484 VNLQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEAL 543
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNG-------- 225
L L F ++K++L++ + A + W GWVES+ R L ++ER G
Sbjct: 544 HLVLKPLDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGS 603
Query: 226 ------LLQCHPYP--NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQ---FDIRGTVDN 274
+ P P + +P C +S V QQ D+R
Sbjct: 604 TPKFEAAMTVRPIPCTFSFQEPGWECASSML---------VALNFAQQPCVIDLRPAAGE 654
Query: 275 FREEIGMY---MFWKPGMDIYVSHVRRRQLPSFVF 306
F + I + + + V H+RR QLP++V
Sbjct: 655 FVDLINQWPERAQLDGQIQLRVKHLRRSQLPAYVL 689
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 203/392 (51%), Gaps = 57/392 (14%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + RSLNG RV D IL VP+V FR LR ++ WAKRRG+YSNV GF GGV
Sbjct: 179 ILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 238
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRKNP 120
WALL AR+CQLYP A P+ +V +FF +Y QW WP PV+L I+ + SVW+P+ +
Sbjct: 239 WALLTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDR 298
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI-ELNKAQWSALFEPY 179
RD++H MP+ITPAYP M S++N++ ST+ ++ ++ +I +EI + + W LFE
Sbjct: 299 RDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKV 358
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
FF YK Y+QV A+ +D + W G VESR R L +E +T+ ++ HP
Sbjct: 359 DFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV--- 414
Query: 240 SKPCPNSAFF------------------MGLRRKEGVTGKERQQ-----FDIRGTVDNFR 276
N F+ M R +E V +E ++ F I ++
Sbjct: 415 -----NRVFYCLTEEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKS 469
Query: 277 EEIG---MYMFWKPG----------------MDIYVSHVRRRQLPSFVFPDGYKRPRPSR 317
+E G + +F+ M + + +R +LPS+VFPDG + +
Sbjct: 470 KETGGRVLNLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKT 529
Query: 318 HFNEQAGKPCEDVKMCQSGSSGRHLKREKEHE 349
+Q G D M GS G+ + + E
Sbjct: 530 KRQQQNG--SGDAGM-NDGSEGQGPSKRTKSE 558
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 191/335 (57%), Gaps = 40/335 (11%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +VDE+T RS+NG RVAD ILK VPN E F++TLR +K WAK RG+YSNV G+LGGV+
Sbjct: 383 VLRHVDEKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVS 442
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEE---DELG-FSVWDPR 117
WA+LVAR CQLYPN PS LV RFF VY+ W W N PV+LC I+E D L F VW+P+
Sbjct: 443 WAILVARCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPK 502
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICE----EIELNKAQWS 173
N +DR H +PIITPA+P MNS++NVSLST RV+TE+F RI + + E++ +
Sbjct: 503 VNLQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEAL 562
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNG-------- 225
L L F ++K++L++ + A + W GWVES+ R L ++ER G
Sbjct: 563 HLVLKPLDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGS 622
Query: 226 ------LLQCHPYP--NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQ---FDIRGTVDN 274
+ P P + +P C +S V QQ D+R
Sbjct: 623 TPKFEAAMTVRPIPCTFSFQEPGWECASSML---------VALNFAQQPCVIDLRPAAGE 673
Query: 275 FREEIGMY---MFWKPGMDIYVSHVRRRQLPSFVF 306
F + I + + + V H+RR QLP++V
Sbjct: 674 FVDLINQWPERAQLDGQIQLRVKHLRRSQLPAYVL 708
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 12/242 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP FR+ LR +K WA+RR VY NV GF GGV
Sbjct: 175 NLLRNLDEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGV 234
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA +++++RFF++Y+ W+WP PV+L PIE+ L VW+P+ +
Sbjct: 235 AWAMLVARICQLYPNACSAVIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQ 294
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DRSH MP+ITPAYP M +++N++ ST ++ ++ Q G +I +I NK W+ LF+ + F
Sbjct: 295 DRSHRMPVITPAYPSMCATHNITESTKSIILQELQRGIQITNDIFTNKKTWNDLFKRHDF 354
Query: 182 FEAYKNYLQVDIVAAD--ADD---------LLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
F YK YL + + DD L W G VES+ R L +K+E G+ H
Sbjct: 355 FYKYKFYLTITASTREHTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLEA-LEGIKVAH 413
Query: 231 PY 232
PY
Sbjct: 414 PY 415
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 191/335 (57%), Gaps = 40/335 (11%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL +VDE+T RS+NG RVAD ILK VPN E F++TLR +K WAK RG+YSNV G+LGGV+
Sbjct: 394 VLRHVDEKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVS 453
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEE---DELG-FSVWDPR 117
WA+LVAR CQLYPN PS LV RFF VY+ W W N PV+LC I+E D L F VW+P+
Sbjct: 454 WAILVARCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPK 513
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICE----EIELNKAQWS 173
N +DR H +PIITPA+P MNS++NVSLST RV+TE+F RI + + E++ +
Sbjct: 514 VNLQDRHHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEAL 573
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNG-------- 225
L L F ++K++L++ + A + W GWVES+ R L ++ER G
Sbjct: 574 HLVLKPLDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGS 633
Query: 226 ------LLQCHPYP--NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQ---FDIRGTVDN 274
+ P P + +P C +S V QQ D+R
Sbjct: 634 TPKFEAAMTVRPIPCTFSFQEPGWECASSML---------VALNFAQQPCVIDLRPAAGE 684
Query: 275 FREEIGMY---MFWKPGMDIYVSHVRRRQLPSFVF 306
F + I + + + V H+RR QLP++V
Sbjct: 685 FVDLINQWPERAQLDGQIQLRVKHLRRSQLPAYVL 719
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 170/299 (56%), Gaps = 53/299 (17%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+DE TVRSLNG RVAD IL VPN ++FR TLR +K WAKRRG+YSN+ GFLGG++
Sbjct: 251 ILKNLDEVTVRSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGIS 310
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDEL----GFSVWDPRK 118
WALL A++CQ+YPN S L+ +FFRVY+ W W PV++ I++ + F++WDP K
Sbjct: 311 WALLTAKICQIYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEK 370
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELN---------- 168
N +D+ H MPIITPA+PCMNS++NV+ T ++ E+F+ + I ++ N
Sbjct: 371 NVKDKLHIMPIITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVME 430
Query: 169 --------------------------------KAQWSALFEPYLFFEAYKNYLQVDIVAA 196
+ WS + EP+ F+ YK++L + I+
Sbjct: 431 HVNNLMSHGNAININNVGKSGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGT 490
Query: 197 DADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI---DPSKPCPNSAFFMGL 252
+ WKGW+ES+ R L K+E T L+ P+P Y D C S+FF+ L
Sbjct: 491 NELIYNLWKGWIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYC--SSFFIAL 545
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 149/234 (63%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS+ST V+ + Q G I ++I L + +W LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + + W G VES+ R L ++R + HP+P +
Sbjct: 362 KDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 414
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 149/234 (63%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS+ST V+ + Q G I ++I L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK YL + + + W G VES+ R L ++R + + HP+P +
Sbjct: 362 RDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKST-IAVAHPFPKGF 414
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 150/234 (64%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP+A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S+ST V+ + Q G I ++I L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + + W G VES+ R L ++R + HP+P +
Sbjct: 362 QDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 212/406 (52%), Gaps = 53/406 (13%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSL G RV D+IL+ VP FR LR +K WA+RR +YSNV GFLGGV
Sbjct: 177 NLLRNLDERDVRSLGGSRVTDEILRLVPQPVVFRDALRAVKLWAQRRAIYSNVIGFLGGV 236
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQL+P + ++SRFF + QW WP P++L IE+ L VW+P+ P
Sbjct: 237 AWAMLVARICQLFPKYDAASILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPS 296
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR+H MPIITPAYP M +++NV+ ST+++M + + G++I E+I W+ LFE + F
Sbjct: 297 DRTHLMPIITPAYPSMCATHNVTHSTMKIMQNELRRGSQIVEKIIQAGEPWANLFEKHDF 356
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F Y+ YLQ+ I + + + W G VES+ R L K+E + HP+ + +D
Sbjct: 357 FHMYRYYLQIIITSGNQEMYHKWAGTVESKIRLLVGKLELQ-EAVEIAHPF-TKGLDQVV 414
Query: 242 PCPN-----------------------------------SAFFMGLR---RKEGVTGKER 263
C N F++GL + G TG
Sbjct: 415 CCLNDDEVRAVAKYEMDDEVLKRSETEHEGKDGVSKVFMKTFYIGLGVEPKPAGQTGP-- 472
Query: 264 QQFDIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQ 322
++ DI F + + ++ ++ + M I + +V+ LP F G ++
Sbjct: 473 RKLDISYPTIEFVKTVKLWDLYEEEQMGIVIRYVKHSALPDNCFEGGVRQ--------AL 524
Query: 323 AGKPCEDVKMCQSGSSGRHLKREKEHEME-EVRPDKSVKRASISSE 367
AGK + K ++G + L R H++ + P K ++ S++ +
Sbjct: 525 AGKGVKRTK-SKAGDGKKPLSRTSPHDVSGDYSPHKKQRKDSLTGD 569
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 150/234 (64%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP+A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S+ST V+ + Q G I ++I L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + + W G VES+ R L ++R + HP+P +
Sbjct: 362 QDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 149/234 (63%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS+ST V+ + Q G I ++I L + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK YL + + + W G VES+ R L ++R + + HP+P +
Sbjct: 362 RDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKST-IAVAHPFPKGF 414
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 155/234 (66%), Gaps = 6/234 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL VP F+ LR +K WA+RR VY NV GF GGV
Sbjct: 530 NLLKNIDEKDLRALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGV 589
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ ++++S+FF + QW WP PV+L PIE+ L VW+PR P
Sbjct: 590 AWAMLVARICQLYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 649
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST +V+ ++FQ G+ I EI +WS LF + F
Sbjct: 650 DKYHKMPVITPAYPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDF 709
Query: 182 FEAYKNYLQVDIVAA---DADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL V +AA +++ + G VES+ R L K+E + N L HP+
Sbjct: 710 FRRYKFYLTV--IAATKGSSEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 760
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S +V +FFR+ QW+WP PV+L PIEE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVSLST V+ + + G I ++I + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFF 360
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + D W G VES+ R L ++R ++ + HP+P +
Sbjct: 361 SQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ QW WP PV+L PIEE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVSLST V+ + + G I ++I L + W+ LF + FF
Sbjct: 301 RYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFF 360
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + + W G VES+ R L ++R ++ + HP+P +
Sbjct: 361 SQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKSS-IEVAHPFPKGF 414
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 245 NSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGM-DIYVSHVRRRQLPS 303
++ +++GL K G R DI F+ + ++PG+ D++++HVR LP
Sbjct: 483 STTYYIGLELKPLAPGAARS-LDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPE 541
Query: 304 FVFPDGYKRP-RPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKS-VKR 361
VF G RP RP + + +K + + R + H ++ P ++ KR
Sbjct: 542 DVFQSGEVRPSRPKK----------KTLKKTEPTAQKRSI-----HALDNEEPSENPAKR 586
Query: 362 ASISSEVPQPVSPG 375
+ S+ +P +P
Sbjct: 587 HAASNGIPSAATPA 600
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/309 (46%), Positives = 184/309 (59%), Gaps = 29/309 (9%)
Query: 210 SRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIR 269
SRFRQLTLKIERDTNG+L CHP PNEY+D ++ + AFFMGL+R EGV G+E QQFDIR
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 270 GTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCED 329
GTVD FR+E+ MYMFWKPGMD++VSHVRRRQLP FVFP+GY+RPR SRH N GK ED
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 330 VKMCQSGS-SGRHLKREKEHEMEEVRPDKSVKRASISSEVPQPVSP---GKTTGDSTNDS 385
+ SGS RH KR+ + EM +VRP+K KRAS+S + VSP TTG +
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTPPVC 180
Query: 386 EVMSAGGHLVSEKDTMAAHMQLDGIVNHESVALNEQKCTLVDDLSVINNESESSDLAEPS 445
+ + + +L + +E + +EQ VD ++V+ E SD AEP
Sbjct: 181 NLRRPPSEEIEADNLNTECTELTDLARNECNSGSEQ-VLEVDSMAVVQ---ECSDPAEP- 235
Query: 446 KPGLLGRCEI-HSVDTVSSGSLLNVKGVAIKVDQELVKPCNQMTVVEVAGRE---YESKS 501
LG+C SVD V+ V G +D+ L V ++G + S+S
Sbjct: 236 ----LGKCVTPDSVDVVAC-----VSGQEENLDRNL-------RSVSISGTDSPLLPSRS 279
Query: 502 CTQNLSCEG 510
C QN EG
Sbjct: 280 CGQNRDYEG 288
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S +V +FFR+ QW+WP PV+L PIEE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVSLST V+ + + G I ++I + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFF 360
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + D W G VES+ R L ++R ++ + HP+P +
Sbjct: 361 SQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S +V +FFR+ QW+WP PV+L PIEE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAVVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVSLST V+ + + G I ++I + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFF 360
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + D W G VES+ R L ++R ++ + HP+P +
Sbjct: 361 SQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 193/375 (51%), Gaps = 63/375 (16%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ QW WP PV+L IE+ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVS+ST V+ + + G + ++I + + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-------- 233
A YK YL ++ + + W G VES+ R L ++R ++ + HP+P
Sbjct: 361 SADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGFERVHV 419
Query: 234 ---------------------------NEYIDPS--KPCPNSAFFMGLRRKEGVTGKER- 263
+E DP+ N+ +G+ E TG+ +
Sbjct: 420 CKTDEEVDAVKAGSMKFQADDTKTATTDETNDPTHIAAAENANENVGIAEAEKPTGENKY 479
Query: 264 ---------------------QQFDIRGTVDNFREEIGMYMFWKPGM-DIYVSHVRRRQL 301
+ DI F+ + ++PG+ D+ +SHVR L
Sbjct: 480 TLYTTTYYIGLELKPLAPGASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDL 539
Query: 302 PSFVFPDGYKRP-RP 315
P VF G RP RP
Sbjct: 540 PDDVFQPGEVRPTRP 554
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 193/375 (51%), Gaps = 63/375 (16%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ QW WP PV+L IE+ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVS+ST V+ + + G + ++I + + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-------- 233
A YK YL ++ + + W G VES+ R L ++R ++ + HP+P
Sbjct: 361 SADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGFERVHI 419
Query: 234 ---------------------------NEYIDPS--KPCPNSAFFMGLRRKEGVTGKER- 263
+E DP+ N+ +G+ E TG+ +
Sbjct: 420 CKTDEEVDAVKAGSMKFQADDTKTATTDETNDPTHIAAAENANENVGIAEAEKPTGENKY 479
Query: 264 ---------------------QQFDIRGTVDNFREEIGMYMFWKPGM-DIYVSHVRRRQL 301
+ DI F+ + ++PG+ D+ +SHVR L
Sbjct: 480 TLYTTTYYIGLELKPLAPGASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDL 539
Query: 302 PSFVFPDGYKRP-RP 315
P VF G RP RP
Sbjct: 540 PDDVFQPGEVRPTRP 554
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+ R +YSNV GF GGV
Sbjct: 198 LLRGLDERELRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQSRAIYSNVVGFPGGVA 257
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S+++ +FFR+ QW WP PV+L PIE+ L VW+P+ D
Sbjct: 258 WAMLVARVCQLYPQATGSVIIGKFFRIMNQWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 317
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++N+SLST V+ + + G I ++I + + +WS LF + FF
Sbjct: 318 RFHLMPIITPAYPSMCATHNISLSTKAVILRELKRGGDIVDKIFMGQLRWSDLFAKHSFF 377
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK YL + + + W G VES+ R L L ++R ++ + HP+P +
Sbjct: 378 SKDYKYYLSITASSTTKEAQSVWSGLVESKLRHLVLALDRKSS-IEVAHPFPKGF 431
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 150/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S +V +FFR+ QW+WP PV+L PIEE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVSLST V+ + + G I + I + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFF 360
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + D W G VES+ R L ++R ++ + HP+P +
Sbjct: 361 SQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 245 NSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGM-DIYVSHVRRRQLPS 303
+ +++GL K V G R DI F+ + ++PG+ DI ++HVR LP
Sbjct: 483 TTTYYIGLEVKPLVPGAARS-LDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPD 541
Query: 304 FVFPDGYKRP-RPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRA 362
VF G RP RP + VK ++ + R + HE++ P + +
Sbjct: 542 DVFQPGEVRPSRPKKKV----------VKKSEATAQKRRI-----HELDNEEPTEYPAKR 586
Query: 363 SISSEVPQPVSPG 375
S+ +P +P
Sbjct: 587 RASNGIPSAAAPA 599
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 150/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S +V +FFR+ QW+WP PV+L PIEE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVSLST V+ + + G I + I + + W+ LF + FF
Sbjct: 301 KYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFF 360
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + D W G VES+ R L ++R ++ + HP+P +
Sbjct: 361 SQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 245 NSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGM-DIYVSHVRRRQLPS 303
+ +++GL K V G R DI F+ + ++PG+ DI ++HVR LP
Sbjct: 483 TTTYYIGLEVKPLVPGAARS-LDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPD 541
Query: 304 FVFPDGYKRP-RPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRA 362
VF G RP RP + VK ++ + R + HE++ P + +
Sbjct: 542 DVFQPGEVRPSRPKKKV----------VKKSEATAQKRSI-----HELDNEEPTEYPAKR 586
Query: 363 SISSEVPQPVSPG 375
S+ +P +P
Sbjct: 587 RASNGIPSAAAPA 599
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 154/238 (64%), Gaps = 2/238 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL VP F+ LRC+K WA++R +Y+NV GF GGV
Sbjct: 174 NLLKNIDEKDLRALNGTRVTDEILTLVPKQTVFKHALRCIKMWAQQRAIYANVFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ ++++ +FF +Y+QW WP PV+L IE+ L VW+P+
Sbjct: 234 AWAMLVARICQLYPNAVSAVIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAP 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ +FQ G I I WS LFE + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIEIMNGINSGSKTWSDLFERHDF 353
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F YK YL V +++++ L + G VES+ R L K+E G+ HPY + D
Sbjct: 354 FFRYKFYLCIVAATKSNSEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 149/234 (63%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 184 LRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 243
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 244 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDR 303
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S+ST V+ + Q G I ++I +A W+ LF+ + FF
Sbjct: 304 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIWAKQATWNDLFKKHSFFT 363
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK YL V + + W G VES+ R L ++R + HP+P +
Sbjct: 364 NDYKYYLGVTASSRTKEAESVWSGLVESKVRHLVGALDRKPT-IAVAHPFPKGF 416
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 74 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 133
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S +V +FFR+ QW+WP PV+L PIEE L VW+P+ D
Sbjct: 134 WAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGD 193
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MPIITPAYP M +++NVSLST V+ + + G I ++I + + W+ LF + FF
Sbjct: 194 KYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFF 253
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + D W G VES+ R L ++R ++ + HP+P +
Sbjct: 254 SQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 307
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 154/238 (64%), Gaps = 6/238 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F+ LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +Y+QW WP PV+L IE+ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYAL 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ +FQ G + +I + K WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDF 353
Query: 182 FEAYKNYLQVDIVAADAD---DLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL IVAA + L + G VES+ R L K+E G+ HPY +
Sbjct: 354 FFRYKFYLC--IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPYVKSF 408
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 155/234 (66%), Gaps = 6/234 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL VP F+ LR +K WA+RR VY NV GF GGV
Sbjct: 173 NLLKNIDEKDLRALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGV 232
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ ++++S+FF + QW WP PV+L PIE+ L VW+PR P
Sbjct: 233 AWAMLVARICQLYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPH 292
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++N++ ST +V+ ++FQ G+ I EI +WS LF + F
Sbjct: 293 DKYHKMPVITPAYPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDF 352
Query: 182 FEAYKNYLQVDIVAA---DADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK YL V +AA +++ + G VES+ R L K+E + N L HP+
Sbjct: 353 FRRYKFYLTV--IAATKGSSEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 403
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 154/238 (64%), Gaps = 6/238 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F+ LRC+K WA++R VY N+ GF GGV
Sbjct: 174 NLLKNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ +++V +FF +Y+QW WP PV+L IE+ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYAL 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +V+ +FQ G + +I + K WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDF 353
Query: 182 FEAYKNYLQVDIVAADAD---DLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL IVAA + L + G VES+ R L K+E G+ HPY +
Sbjct: 354 FFRYKFYLC--IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPYVKSF 408
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 208/399 (52%), Gaps = 37/399 (9%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHV-------------PNVEHFRMTLRCLKFWAKRR 48
++L +DE +VRS+NG RVA +L + V++FR+TLR +K WA+
Sbjct: 146 TLLIGLDETSVRSINGVRVAQYLLSTLETTDKNRKNYDSATQVDNFRLTLRAVKEWARVH 205
Query: 49 GVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIE--- 105
G+YSNV GFLGGVNWA+LV VC+ YP+A S L+ FF+ ++ W+WP PV+L +
Sbjct: 206 GLYSNVLGFLGGVNWAILVCWVCKRYPDAPASTLLQIFFKTFSTWKWPMPVLLSTQKQRP 265
Query: 106 -EDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEE 164
E VWDP N RD H MPIITP YP MNSSYNV LR + ++F +++C +
Sbjct: 266 PEGVNNLPVWDPSSNFRDAKHLMPIITPCYPSMNSSYNVGEPQLRRLRDEFARASKLCSD 325
Query: 165 IELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN 224
+ +W LFE FF+ + NYLQVD VA + DD W G E+R R L +E
Sbjct: 326 VAFGTKKWGVLFEWNEFFQQHANYLQVDTVATNEDDFRAWFGLCEARMRLLIAGLESPGF 385
Query: 225 GLLQCHPYPNEYI---DPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGM 281
G ++ +P+ + D ++FF+ LR V + D+ V +F I
Sbjct: 386 G-VRAYPFAKFFHRREDGGGGNYIASFFIALRFANKV-----WKVDLAPLVTDFLTVINS 439
Query: 282 YMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRH 341
+ +P MD+ + V R+ LPSFVF D KR H + KP Q S+ R
Sbjct: 440 WDGREPTMDLMIRLVSRKDLPSFVF-DAEKR---EEHITKPVLKPNN-----QQSSANRT 490
Query: 342 LKREKEHEMEEVRPD--KSVKRASISSEVPQPVSPGKTT 378
+ + E+++ P K+ S +S + +SP K T
Sbjct: 491 DEDDVENQVNATTPSAKKNELDGSSTSSPSEFISPLKRT 529
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 150/234 (64%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L PIE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++NVS+ST V+ + Q G + ++I + + W+ LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNVSMSTKNVILRELQRGGDMVDKIFMKQLTWNDLFARHSFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL++ + + W G VES+ R L ++R + HP+P +
Sbjct: 362 KDYKYYLRITAASTTKEADSVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 145/235 (61%), Gaps = 13/235 (5%)
Query: 12 VRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 71
VRSLNGCRV D IL VPN + FR LR +K WAKRRG+YSN G+LGGV+WA+LVAR C
Sbjct: 164 VRSLNGCRVTDAILSLVPNADSFRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVARTC 223
Query: 72 QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIIT 131
QLYPNA+ + +V +FF V+ QW W PV+L + E +L + W P N DRS M IIT
Sbjct: 224 QLYPNAVAATIVQKFFLVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIIT 282
Query: 132 PAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQV 191
P YP NS++NVS ST ++ E+ + G +IC EI L A+W+ FEP FF YK+Y+ +
Sbjct: 283 PVYPHQNSTFNVSKSTKTILLEEIERGLKICNEIFLRNAKWTDAFEPADFFGRYKHYIVL 342
Query: 192 DIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNS 246
A D+ W G VES+ R+L L +ER NEY D P S
Sbjct: 343 TAKATSEDNYKEWIGLVESKLRKLVLTLER------------NEYFDIVHINPKS 385
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 144/220 (65%), Gaps = 1/220 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F++ LR +K WA+RR VY+N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A PS++V++FF V +QWRWP PV+L PIE L VW+PR D
Sbjct: 241 WAMLVARVCQLYPKATPSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N++ S+++V+ + +I E I + K WS LF + FF
Sbjct: 301 SFHLMPVITPAYPSMCATFNITRSSMKVINRELSRALQISESIMVGKRPWSDLFVKHTFF 360
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
+ YK Y+ V A +D W G+VES+ R L K+E+
Sbjct: 361 TQGYKYYISVISSAKSKEDHKIWSGYVESKVRMLVQKLEQ 400
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 156/236 (66%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F+ LR +K WA++R VY+NV GF GGV
Sbjct: 179 NLLKNIDEKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ ++++ +FF++Y+QW WP PV+L IE+ L VW+PR
Sbjct: 239 AWAMLVARICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAM 298
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ +F G I EI + WS L E + F
Sbjct: 299 DRQHRMPVITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSF 358
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V ++A++ L + G VES+ R L K+E+ +G+ HPY +
Sbjct: 359 FHQYKFYLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSF 413
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 156/236 (66%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F+ LR +K WA++R VY+NV GF GGV
Sbjct: 174 NLLKNIDEKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ ++++ +FF++Y+QW WP PV+L IE+ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAM 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ +F G I EI + WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSF 353
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V ++A++ L + G VES+ R L K+E+ +G+ HPY +
Sbjct: 354 FHQYKFYLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSF 408
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 149/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+ R +YSNV GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L PIE+ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVSLST V+ + + G I E+I L + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK YL + + + W G VE++ R L + +++ + + HP+P +
Sbjct: 361 SKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKAS-IEVAHPFPKGF 414
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 203/393 (51%), Gaps = 58/393 (14%)
Query: 3 VLNNVDEQTVRSLN-GCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+L VD+ + RSLN G RV D IL VP+V FR LR ++ WAKRRG+YSNV GF GGV
Sbjct: 179 ILRGVDDASQRSLNAGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRKN 119
WALL AR+CQLYP A P+ +V +FF +Y QW WP PV+L I+ + SVW+P+ +
Sbjct: 239 AWALLTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLD 298
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI-ELNKAQWSALFEP 178
RD++H MP+ITPAYP M S++N++ ST+ ++ ++ +I +EI + + W LFE
Sbjct: 299 RRDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEK 358
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
FF YK Y+QV A+ +D + W G VESR R L +E +T+ ++ HP
Sbjct: 359 VDFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV-- 415
Query: 239 PSKPCPNSAFF------------------MGLRRKEGVTGKERQQ-----FDIRGTVDNF 275
N F+ M R +E V +E ++ F I ++
Sbjct: 416 ------NRVFYCLTEEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKK 469
Query: 276 REEIG---MYMFWKPG----------------MDIYVSHVRRRQLPSFVFPDGYKRPRPS 316
+E G + +F+ M + + +R +LPS+VFPDG + +
Sbjct: 470 SKETGGRVLNLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKK 529
Query: 317 RHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHE 349
+Q G D M GS G+ + + E
Sbjct: 530 TKRQQQNG--SGDAGM-NDGSEGQGPSKRTKSE 559
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 150/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+ R +YSNV GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L PIE+ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVSLST V+ + + G I E+I L + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFF 360
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + + W G VE++ R L + +++ + + HP+P +
Sbjct: 361 SKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKAS-IDVAHPFPKGF 414
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 192/375 (51%), Gaps = 63/375 (16%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ QW WP PV+L IE+ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVS+ST V+ + + G + ++I + + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-------- 233
A YK YL ++ + + W G VES+ R L ++R ++ + HP+P
Sbjct: 361 SADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGFERVHI 419
Query: 234 ---------------------------NEYIDPS--KPCPNSAFFMGLRRKEGVTGKER- 263
+E DP+ N+ +G+ E TG+ +
Sbjct: 420 CKTDEEVDAVKAGSMKYQADDTKTATTDETNDPTHIAAAENANENVGIAEAEKPTGENKY 479
Query: 264 ---------------------QQFDIRGTVDNFREEIGMYMFWKPGM-DIYVSHVRRRQL 301
+ DI F+ + ++PG+ D+ +SHVR L
Sbjct: 480 TLYTTTYYIGLELKPLAPGASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDL 539
Query: 302 PSFVFPDGYKRP-RP 315
P VF RP RP
Sbjct: 540 PDDVFQPSEVRPTRP 554
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 193/365 (52%), Gaps = 45/365 (12%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ QW WP PV+L IE+ L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVS+ST V+ + + G + ++I + + +WS LF + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKSVILRELRRGGDMVDKIFVGQRRWSDLFARHSFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTL----------KIERDTNGLLQCH- 230
A YK YL ++ + + W G VES+ R L +I+ G ++
Sbjct: 361 SADYKYYLSINSTSTTKEAQAIWSGLVESKLRHLGFERVHICKTDAEIDAVKAGSMKYQA 420
Query: 231 -----PYPNEYIDPS------------------KPCPNS-------AFFMGLRRKEGVTG 260
+E DP+ KP + +++GL K G
Sbjct: 421 DDTKTATTDETNDPTHVAAAENANENVAIAEAEKPAEENKYTVYTTTYYIGLELKPLAPG 480
Query: 261 KERQQFDIRGTVDNFREEIGMYMFWKPGM-DIYVSHVRRRQLPSFVFPDGYKRP-RPSRH 318
R DI F+ + ++PG+ D+ +SHVR LP VF G RP RP +
Sbjct: 481 ASR-SLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEVRPTRPKKK 539
Query: 319 FNEQA 323
++A
Sbjct: 540 VVKKA 544
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 148/232 (63%), Gaps = 4/232 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + R LNG RV D IL VP+V FR LR ++ WAKRRG+YSNV GF GGV
Sbjct: 175 ILRGVDDASQRGLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 234
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRKNP 120
WALL AR+CQLYP A P+ +V++FF ++ QW WPNPV+L IE + SVW+P+ +
Sbjct: 235 WALLTARICQLYPTAAPATIVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDR 294
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK-AQWSALFEPY 179
RD +H MPIITPAYP M +++N++ ST+ V+ + ++ + I N + W LFE
Sbjct: 295 RDMAHRMPIITPAYPSMCTTHNITASTMSVIKNEMLRAMQVTDRIMSNPGSSWMELFEQI 354
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHP 231
FF YK+Y+QV A+ ++ + W G VESR R L +E N ++ HP
Sbjct: 355 DFFSMYKSYVQVIASASTSEGIKDWGGTVESRIRTLVQDLENSDN-IITAHP 405
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 146/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE +RSLNG RV D+IL VP FR+ LR +K WA+RR VY N+ GF GGV W
Sbjct: 182 LRGLDEAELRSLNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V++FF V +QWRWP PV+L PIE L VW+P+ D
Sbjct: 242 AMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDS 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N++ S++ ++ + Q G I E++ + K WS LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQPWSDLFVKHTFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK Y+ V + + W G++ES+ R L K+E+ + L HPY Y
Sbjct: 362 TGYKYYISVVSASKAKEPHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGY 414
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP FR+ LR +K WA+RR VY N+ GF GGV
Sbjct: 185 LLRGLDEAELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVA 244
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V++FF V +QWRWP PV+L PIE L VW+P+ D
Sbjct: 245 WAMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGD 304
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
H MPIITPAYP M +++N++ S++ ++ + Q G I E++ + K W+ LF + FF
Sbjct: 305 SFHLMPIITPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQSWNDLFVKHTFF 364
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK Y+ V + D W G++ES+ R L K+E + L HP+ Y
Sbjct: 365 TTGYKYYISVVSASKARDAHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKGY 418
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 146/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L IE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S+ST V+ + Q G I ++I + + W LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFMKQLSWQDLFARHTFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK YL + + + W G VES+ R L ++R + HP+P +
Sbjct: 362 HDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPI-VAVAHPFPKGF 414
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + VRSLNGCR D+IL+ VPN+++FR+ LR +K WAK+ G+YSN G+ GGV+
Sbjct: 396 LLKNLDPKLVRSLNGCRATDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVS 455
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
W +LVAR CQL PN + + V +FF V+ +W+WP PV L + LGF VWD R N +D
Sbjct: 456 WGMLVARTCQL-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQD 514
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS+++VS ST +VM +F G +I +EI L KA W LFE FF
Sbjct: 515 RFHLMPIITPAYPQPNSTFHVSSSTRKVMLNEFNSGMQITDEIMLGKAGWDKLFEAPSFF 574
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
Y+ + + + + + DD L W VES+ R L +ER
Sbjct: 575 FKYRYVIVLLVTSNNTDDHLEWCEMVESKIRYLIQNLER 613
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 147/232 (63%), Gaps = 1/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE+ +RSLNG RV D+IL VP F+ LR +K WAK + +Y NV GF GGV
Sbjct: 864 NLLRGLDEKELRSLNGTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNVYGFPGGV 923
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYP+A+ +++VS+FFR+ QW WP PV+L PIE+ L VW+PR P
Sbjct: 924 AWAMLVARICQLYPSAVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPS 983
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D++H MPIITPAYP M S++N++ ST + + I + I K W LFE + F
Sbjct: 984 DKNHLMPIITPAYPSMCSTHNITPSTKAAILGEMAKAADIVDRIITGKGNWKQLFERHTF 1043
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F + YK YL V+ A + + + W G VES+ R L +K+E + + PY
Sbjct: 1044 FTKDYKYYLAVNASAKEQEASVKWSGLVESKIRHLVMKLEMCNDVIASARPY 1095
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 139/219 (63%), Gaps = 1/219 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L DE +R LNG RV D+IL VP FRM LR +K WA+RR +Y+NV GF GGV
Sbjct: 180 LLRGCDEVNLRCLNGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVA 239
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR+CQLYP A+ ++++S+FF++ W WP PV+L IE+ L VW+P+ P D
Sbjct: 240 WAMLVARICQLYPMAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSD 299
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++N++ ST ++ + + I + I + W LFE + FF
Sbjct: 300 RGHLMPIITPAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFF 359
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
Y+ YL V A D D LL W G VES+ R L +K+E
Sbjct: 360 TNGYRYYLSVVAAAKDKDTLLGWSGLVESKLRHLVMKLE 398
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 186/319 (58%), Gaps = 14/319 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D+++VRSLNG RVA+++L+ VPN E F MTLR +K WAK GVYSN GF GG+
Sbjct: 988 NLLKNMDQESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 1047
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC-PIEE--DELGFSVWDPRK 118
WALLVAR CQLYPNA PS LV + F V++ W +P+P++LC P E D L +
Sbjct: 1048 TWALLVARTCQLYPNATPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGR 1107
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
N DR H MPIITPA+P NS++NVS ST+ V+ ++ IC ++ K W LFE
Sbjct: 1108 NHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALIICNDVFEGKCDWKFLFEE 1167
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F+ YK+++ + + A + ++ G++ESR R L ER+ G+ H P +
Sbjct: 1168 VNFYSQYKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQP 1226
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG---MDIYVSH 295
SK S +F+GL E V + D+ +DNF+ + + G +++ +S+
Sbjct: 1227 TSK--SQSLWFIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEDVELDISY 1279
Query: 296 VRRRQLPSFVFPDGYKRPR 314
V+R QL ++ K+ R
Sbjct: 1280 VKRSQLIKYLPAAELKKGR 1298
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 188/319 (58%), Gaps = 14/319 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D+++VRSLNG RVA+++L+ VPN E F MTLR +K WAK GVYSN GF GG+
Sbjct: 183 NLLKNMDQESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 242
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC-PIEE--DELGFSVWDPRK 118
WALLVAR CQLYPNA PS LV + F V++ W +P+P++LC P E D L +
Sbjct: 243 TWALLVARTCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWGR 302
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
N DR H MPIITPA+P NS++NVS ST+ V+ ++ IC +I K W LFE
Sbjct: 303 NHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFDGKCDWKFLFEE 362
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F+ YK+++ + + A + ++ G++ESRFRQL ER+ G+ H P +
Sbjct: 363 VNFYSQYKHFVVMKLDAKKEETENSYGGFLESRFRQLIGAFERN-RGIKMAHLNPKKCQP 421
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG---MDIYVSH 295
SK S +F+GL + V + D+ +DNF+ + + G +++ +S+
Sbjct: 422 TSK--AQSLWFIGLEFDDVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISY 474
Query: 296 VRRRQLPSFVFPDGYKRPR 314
+R QL ++ P K+ R
Sbjct: 475 AKRSQLIKYMPPAELKKGR 493
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 181/349 (51%), Gaps = 42/349 (12%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL +++E T+RS+NG RV ++L VP HFR LR +K WA RR +Y V G+ GG+
Sbjct: 181 SVLRHLEETTIRSVNGTRVVKELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPGGI 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDP--RKN 119
WA++VAR+CQLYP A + ++S+FF + +W+WP PVML E E G VW+P +
Sbjct: 241 AWAIMVARICQLYPMACGATILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSY 300
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P D H MP+ITPA+P M S++ V+ ST ++M E+FQ ++I ++ + W ALF +
Sbjct: 301 PPDARHLMPVITPAFPAMCSTHTVTTSTKQIMMEEFQRADKIVRDVFNGQGTWEALFNNH 360
Query: 180 LFF-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN---- 234
FF + +K YL V + + LT+ G V+S+ R L I+ G+ P+P
Sbjct: 361 SFFTQDHKYYLSVIAASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGFER 420
Query: 235 ------------------EYIDPSKPCPNSA-----------FFMGLRRKEGVTGKERQQ 265
+Y+ P P + F++GLR KER
Sbjct: 421 VHRCKNEDEVEAVTKGSLDYMIPVSQVPAAGTTEDHIIYTMTFYIGLR-----LPKERST 475
Query: 266 FDIRGTVDNFREEIGMYMFWKPG-MDIYVSHVRRRQLPSFVFPDGYKRP 313
DI ++FR +I + G M + V H R LP +F G RP
Sbjct: 476 LDISYITNHFRSKITESKLYDEGTMSVKVVHTRNTALPDDLFKPGEVRP 524
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 146/234 (62%), Gaps = 2/234 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +DE+ VRSLNG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 182 LRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 241
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVARVCQLYP A S++V +FFR+ +W WP PV+L IE+ L VW+P+ DR
Sbjct: 242 AMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDR 301
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
H MPIITPAYP M +++N+S+ST V+ + Q G + ++I + + W LF + FF
Sbjct: 302 FHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDMVDKIFMKQLSWHDLFARHTFFT 361
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK YL + + + W G VES+ R L ++R + HP+P +
Sbjct: 362 HDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPI-IAVAHPFPKGF 414
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++EQ RSLNG RVAD++L VP + FR LR +K W+ RRG+ N+ GF GGV
Sbjct: 182 LLRGLEEQEARSLNGVRVADEMLTLVPQTKVFRTALRTIKLWSARRGIVGNIYGFPGGVA 241
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S +V +FF++ +W+WP PV+L IE L VW+P+ N D
Sbjct: 242 WAILVARVCQLYPKATGSTIVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHTD 301
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NV+ ST+ V+ ++ + G I + + + KA+W LFE + FF
Sbjct: 302 RRHIMPIITPAYPSMCTTHNVTRSTMAVIHKELKRGGEIADRVMMGKAKWKDLFEKHTFF 361
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+YK YL + + ++ W G+VES+ R L K+ T+ + P+ Y
Sbjct: 362 TSSYKYYLCIITASTSSEAQTKWAGFVESKVRLLVGKLTEQTS-IAIAQPFNKGY 415
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A P+++V++FF V +QWRWP PV+L PIE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N++ S++ ++ + + +I E I + WS LF + FF
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
A YK Y+ V A + W G+VES+ R L K+E+ + L HP+ Y
Sbjct: 361 TAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 202/385 (52%), Gaps = 39/385 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPN---VEHFRMTLRCLKFWAKRRGVYSNVTGFL 58
S+L +DE +VRS+NG RVA +L + + +E++R+TLR +K WA+ +G+YSNV G+L
Sbjct: 263 SLLVGLDEASVRSVNGVRVAQYLLSTMSSPRQLENYRLTLRAVKEWARVQGMYSNVLGYL 322
Query: 59 GGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDEL------GFS 112
GGVNWA+LV VC +P+A + L+ FF + W WP+PVML P +
Sbjct: 323 GGVNWAILVCFVCIRHPDASSARLLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARP 382
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI------- 165
VWDPR+N RD+ H MPIITP YP MNSS+NV LR M ++F+ R+ EI
Sbjct: 383 VWDPRENYRDKLHVMPIITPCYPSMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATG 442
Query: 166 ELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNG 225
E K WS+LFE FF + YL+VD+ A D+ L W G E+R R L +E D
Sbjct: 443 EDGKKGWSSLFERSGFFGQHGAYLRVDVAATTEDEFLRWFGLCEARMRLLIAGLESDE-- 500
Query: 226 LLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIR--GTVDNFREEIGMYM 283
++ +P+ Y +K S+FF+ LR GV D+R V + + +
Sbjct: 501 -IRAYPFARFYRRDTKEEYVSSFFVALRFASGV------DRDVRWGERVSEYLHVVNSFE 553
Query: 284 FWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLK 343
GMD+ + ++R LP FVF DG S + E V+M + L
Sbjct: 554 GRTAGMDLRLELLKRADLPRFVF-DG------SEMLRRDGAEGGEGVRMEARATPS--LA 604
Query: 344 REKEHEMEEVRPDKSV---KRASIS 365
K+ EV P +++ KR I+
Sbjct: 605 TRKKAADREVSPSENISPLKRTRIA 629
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 150/235 (63%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 198 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 257
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ QW WP PV+L IE+ L VW+P+ D
Sbjct: 258 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGD 317
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++N+S+ST V+ + + G + + I + + +WS LF + FF
Sbjct: 318 RFHLMPIITPAYPSMCATHNISMSTKAVILRELRRGGDMVDNIFVGQRRWSDLFARHSFF 377
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
YK YL ++ + + W G VES+ R L ++R ++ + HP+P +
Sbjct: 378 SGDYKYYLSINSTSTTKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 431
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 150/236 (63%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +DE +RSLNG RV D+IL VP F++ LR +K WA+RR VY+N+ GF GGV
Sbjct: 180 SLLRGLDEAELRSLNGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF V QWRWP PV+L PI L VW+P+
Sbjct: 240 AWAMLVARVCQLYPKAETSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKG 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MP+ITPAYP M +++N++ S++ ++ + + G I EEI + K WS LF + F
Sbjct: 300 DSFHLMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEEIMVGKRPWSDLFVKHTF 359
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F + Y+ Y+ V + + + W G+VES+ R L K+E+ ++ L HP+ Y
Sbjct: 360 FTQGYRYYISVVSASKNKEAHKVWSGYVESKVRMLVQKLEQHSSIAL-AHPFNKGY 414
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 144/221 (65%), Gaps = 1/221 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +DE +RSLNG RV D+IL VP FR+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 180 SLLRGLDEAELRSLNGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF V QWRWP PV+L PI+ L VW+P+
Sbjct: 240 AWAMLVARVCQLYPKATMSVIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKG 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MP+ITPAYP M +++N++ S++ ++ + + G I E+I + K WS LF + F
Sbjct: 300 DSFHLMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEQIMVGKRPWSDLFVKHTF 359
Query: 182 FEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
F + Y+ Y+ V + D + W G+VES+ R L K+E+
Sbjct: 360 FTSGYRYYISVISASKDKEAHKIWSGYVESKVRMLVQKLEQ 400
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 152/236 (64%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F+ LR +K WA++R +Y+NV GF GGV
Sbjct: 174 NLLKNIDEKDMRALNGTRVTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ ++++ +FF++Y+QW WP PV+L IE+ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAM 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ +F G I + + WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQKSWSDLLERHDF 353
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V ++ ++ + G VES+ R L K+E+ G+ HPY +
Sbjct: 354 FHKYKFYLCVVAATKSNTEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSF 408
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A P+++V++FF V +QWRWP PV+L PIE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N++ S++ ++ + + +I E I + WS LF + FF
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
A YK Y+ V A + W G+VES+ R L K+E+ + L HP+ Y
Sbjct: 361 TAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 187/319 (58%), Gaps = 14/319 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D+++VRSLNG RVA+++L+ VPN E F MTLR +K WAK GVYSN GF GG+
Sbjct: 182 NLLKNMDQESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC-PIEE--DELGFSVWDPRK 118
WALLVAR CQLYPNA PS LV + F V++ W +P+P++LC P E D L +
Sbjct: 242 TWALLVARTCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWGR 301
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
N DR H MPIITPA+P NS++NVS ST+ V+ ++ IC ++ K W LFE
Sbjct: 302 NHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDVFEGKCDWKHLFEE 361
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F+ YK+++ + + A + ++ G++ESR R L ER+ G+ H P +
Sbjct: 362 LNFYSQYKHFVVLKLDAKKEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQP 420
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG---MDIYVSH 295
SK S +F+GL E V + D+ +DNF+ + + PG +++ +S+
Sbjct: 421 TSK--AQSLWFIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIPGFEDVELDISY 473
Query: 296 VRRRQLPSFVFPDGYKRPR 314
V+R QL ++ K+ R
Sbjct: 474 VKRSQLIKYLPAAELKKGR 492
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 188/366 (51%), Gaps = 60/366 (16%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +DE +RSLNG RV D+IL VP F++ LR +K WA+RR VY+N+ GF GGV
Sbjct: 184 SLLRGLDEAELRSLNGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFPGGV 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF V QWRWP PV+L PI L VW+P+
Sbjct: 244 AWAMLVARVCQLYPKAATSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKG 303
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MP+ITPAYP M +++N++ S++ V+ + + G I E+I + K WS LF + F
Sbjct: 304 DSFHLMPVITPAYPSMCATFNITRSSMSVIQRELRRGLEISEQIMVGKRPWSDLFVKHTF 363
Query: 182 FEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY---- 236
F + Y+ Y+ V + D + W G+VES+ R L K+E+ + L H + Y
Sbjct: 364 FTSGYRYYISVVSASKDKEAHKVWSGYVESKVRMLVQKLEQHPSIAL-AHAFNKGYDRRH 422
Query: 237 ------------------------------IDPSKP----------CPNSAF----FMGL 252
I+P KP P F ++GL
Sbjct: 423 RCKNDHEIEQVQEGSLEFMIKEESGSQSGEIEP-KPEVKDGSAETSSPVEVFTTTHYIGL 481
Query: 253 RRKEGVTGKERQQFDIRGTVDNFREEIGMYMFW----KPGMDIYVSHVRRRQLPSFVFPD 308
+EG + D+ VD F+ + + +P + + V HVR LP VF
Sbjct: 482 ELEEGA-----KSLDLSYQVDEFKVLCTQWKKYQEELQPSVSLGVQHVRNFNLPDDVFDP 536
Query: 309 GYKRPR 314
G ++P+
Sbjct: 537 GEEKPQ 542
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 122/168 (72%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L ++D + +RSLNGCRV D+IL VPN E FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 123 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 182
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWDPR NP
Sbjct: 183 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 242
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK 169
DR H MPIITPAYP NS+YNVS ST VM E+F+ R I + K
Sbjct: 243 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQVYRQANNINMLK 290
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 183/368 (49%), Gaps = 61/368 (16%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F++ LR +K WA+RR VY N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V++FF V +QWRWP PV+L PIE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N+S S++ ++ + + G I E I + K WS LF + FF
Sbjct: 301 SFHLMPVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKRPWSDLFVKHTFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE--------------------- 220
+ YK Y+ V + + W G+VES+ R L K+E
Sbjct: 361 TSDYKYYISVISASKSKEAHNVWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYERRHQC 420
Query: 221 RDTNGLLQCHPYPNEYI--------------------------DPSKPCPNSAF----FM 250
+D + + Q +++ D P F ++
Sbjct: 421 KDDSEIAQVQDGSLDFLIKGDEDCQATAKLESEEPRHDATENGDTESKRPTKVFTTTHYI 480
Query: 251 GLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFW----KPGMDIYVSHVRRRQLPSFVF 306
GL E + D+ VD F+ + + KP + I V HVR LPS VF
Sbjct: 481 GLELDEAA-----KSLDLSYQVDEFKVLCTQWQKYQEELKPLVSIGVQHVRNFNLPSDVF 535
Query: 307 PDGYKRPR 314
G K+P+
Sbjct: 536 DIGEKKPQ 543
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 194/389 (49%), Gaps = 77/389 (19%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 188 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 247
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKN--- 119
WA+LVARVCQLYP A S++V +FFR+ QW WP PV+L IE+ L VW+P+
Sbjct: 248 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQL 307
Query: 120 -----PR------------DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRIC 162
PR DR H MPIITPAYP M +++NVS+ST V+ + + G +
Sbjct: 308 CFFFIPRALADFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMV 367
Query: 163 EEIELNKAQWSALFEPYLFFEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
++I + + +WS LF + FF A YK YL ++ + + W G VES+ R L ++R
Sbjct: 368 DKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDR 427
Query: 222 DTNGLLQCHPYP-----------------------------------NEYIDPS--KPCP 244
++ + HP+P +E DP+
Sbjct: 428 KSS-IEIAHPFPKGFERVHICKTDEEVDAVKAGSMKYQADDTKTATTDETNDPTHIAAAE 486
Query: 245 NSAFFMGLRRKEGVTGKERQQF----------------DIRGTVDNFREEIGMYMFWKPG 288
N+ +G+ E TG+ + DI F+ + ++PG
Sbjct: 487 NANENVGIAEAEKPTGENKYTLYTTTYYIGLELKPLAPDISSDTHMFKNTCTSWAQYQPG 546
Query: 289 M-DIYVSHVRRRQLPSFVFPDGYKRP-RP 315
+ D+ +SHVR LP VF G RP RP
Sbjct: 547 VNDLNISHVRNYDLPDDVFQPGEVRPTRP 575
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 174/303 (57%), Gaps = 11/303 (3%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
+D + +RSLNGC++ ++IL V N+++FR+TLRC+K WAK VYSN+ GF+ GV+WA+L
Sbjct: 194 LDIRCIRSLNGCKITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWAML 253
Query: 67 VARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHH 126
AR CQLYP A+ S LV FF V+++W PNPV++ E+ L VWD R NP DR
Sbjct: 254 GARTCQLYPIAMASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQF 313
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYK 186
PIITPAYP NS+Y+ S+ST V+ E+F+ I + + L+K + S LFE +FF+ YK
Sbjct: 314 APIITPAYPQQNSTYSASISTQMVVVEEFKXSLSITDXL-LSKVEXSKLFEAPIFFQKYK 372
Query: 187 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPSK 241
+Y+ + A L W G VES+ L +E++ L Q P P E D +
Sbjct: 373 DYIVLLAGAPTEKQRLEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDKKE 432
Query: 242 PCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRR 298
C + + +GL K+ K DI+ D + ++ M I +HV+R
Sbjct: 433 FC--TVWVIGLVFKKTENYKNLSVNLXHDIQAFTDTVYRQARNSKMFEVDMRIAATHVKR 490
Query: 299 RQL 301
+QL
Sbjct: 491 KQL 493
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 146/235 (62%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F++ LR +K WA+RR VY N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V++FF V +QWRWP PV+L PIE L VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N+S S++ ++ + + G I E I + K WS LF + FF
Sbjct: 301 SFHLMPVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKQPWSDLFVKHTFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK Y+ V + + W G+VES+ R L K+E+ + L H + Y
Sbjct: 361 TSDYKYYISVISASKSKEAHNVWSGYVESKVRMLVQKLEQHPSIAL-AHAFNKGY 414
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 187/319 (58%), Gaps = 14/319 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D+++VRSLNG RVA+++L+ VPN E F MTLR +K WAK GVYSN GF GG+
Sbjct: 181 NLLKNMDQKSVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC-PIEE--DELGFSVWDPRK 118
WA+LVAR CQLYPNA PS LV + F V++ W +P+P++LC P E D L +
Sbjct: 241 TWAILVARTCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWGR 300
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
N DR H MPIITPA+P NS++NVS ST+ V+ ++ IC +I K+ W LFE
Sbjct: 301 NHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFEGKSDWKFLFEE 360
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F+ YK+++ + + A + ++ G++ESR R L ER+ G+ H P +
Sbjct: 361 VNFYSQYKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQP 419
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG---MDIYVSH 295
SK S +F+GL E V + D+ +DNF+ + + G +++ +S+
Sbjct: 420 TSK--AQSIWFIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISY 472
Query: 296 VRRRQLPSFVFPDGYKRPR 314
V+R QL ++ K+ R
Sbjct: 473 VKRSQLIKYLPAAELKKGR 491
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL DE TVR+LNGCRV D +LK VP E FR LR +K WA RG+ SNVTG+LGGV
Sbjct: 179 AVLRGCDEPTVRALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N A++VA++CQLYP A S ++ +FF + W WP + L EE LG VWDPR R
Sbjct: 239 NLAIMVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTR 298
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI----ELNKAQWSALFE 177
D MP+ITPAYP MNS YNV STL VMTE+F +C +WS LF
Sbjct: 299 DSLALMPVITPAYPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFT 358
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
P FF + Y+Q+++ A DL+ W GWV SR R+L +E
Sbjct: 359 PVPFFTQHSFYIQLEVSADSEGDLVLWDGWVSSRIRRLVRNLE 401
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 195/357 (54%), Gaps = 18/357 (5%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D+++VR +NG RVAD ILK VP FR LR +K WAKRRG+Y+N+ GF GG+
Sbjct: 187 LLKNLDDRSVRCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGIT 246
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELG---FSVWDPRK 118
WA+LVARVCQ++PN LV RFF + ++W W NPV LCPI + E+G F VW+P++
Sbjct: 247 WAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQ 306
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
DRSH MP+ITPA+P MNS+YNV+ +T R++ + + +++ + + W L
Sbjct: 307 YASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKLTLP-KKEQVDWELLCHK 365
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE--Y 236
+ FF Y Y+Q+ + A + +KG+VESR R L +E +T G+ P+P E Y
Sbjct: 366 FPFFCNYLYYVQIRVSALSSTAYRKYKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPY 424
Query: 237 IDPSKPCPNS-AFFMGLR--RKEGVTGKERQQFDIRGTVDNFREEIGMYM---FWKPGMD 290
+ + NS +++GL + + + D+R F + I + + +
Sbjct: 425 VVDGEVRENSCCWYIGLDFPKLSSMAAGQTVTCDLRNCTSGFFDRINEWSEKDTYHGQFE 484
Query: 291 IYVSHVRRRQLPSFVF----PDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLK 343
+ ++++ R +LP + P P P + + + GRHL+
Sbjct: 485 MDIAYISRPKLPEHLVKDQSPSTDTAPVPEMAVQGTKRRVQSGMNLAGRPKKGRHLE 541
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 193/388 (49%), Gaps = 76/388 (19%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 188 LLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 247
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR- 121
WA+LVARVCQLYP A S++V +FFR+ QW WP PV+L IE+ L VW+P+ +
Sbjct: 248 WAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQL 307
Query: 122 ------------------DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICE 163
DR H MPIITPAYP M +++NVS+ST V+ + + G + +
Sbjct: 308 CFFIPKALTDFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVD 367
Query: 164 EIELNKAQWSALFEPYLFFEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD 222
+I + + +WS LF + FF A YK YL ++ + + W G VES+ R L ++R
Sbjct: 368 KIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRK 427
Query: 223 TNGLLQCHPYP-----------------------------------NEYIDPS--KPCPN 245
++ + HP+P +E DP+ N
Sbjct: 428 SS-IEIAHPFPKGFERVHICKTDEEVDAVKAGSMKYQADDTKTATTDETNDPTHIAAAEN 486
Query: 246 SAFFMGLRRKEGVTGKERQQF----------------DIRGTVDNFREEIGMYMFWKPGM 289
+ +G+ E TG+ + DI F+ + ++PG+
Sbjct: 487 ANENVGIAEAEKPTGENKYTLYTTTYYIGLELKPLAPDISSDTHMFKNTCTSWAQYQPGV 546
Query: 290 -DIYVSHVRRRQLPSFVFPDGYKRP-RP 315
D+ +SHVR LP VF G RP RP
Sbjct: 547 NDLNISHVRNYDLPDDVFQPGEARPTRP 574
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 141/220 (64%), Gaps = 1/220 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F+ LR +K WA+RR VY+N+ GF GGV
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V++FF V +QWRWP PV+L PIE L +W+P+ D
Sbjct: 241 WAMLVARVCQLYPKATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGD 300
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
H MP+ITPAYP M +++N++ S++ ++ + + +I E I + K WS LF + FF
Sbjct: 301 TYHLMPVITPAYPSMCATFNITRSSMAIINRELKRALQISESIMVGKRPWSDLFVKHTFF 360
Query: 183 EA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
A YK Y+ V A + W G+VES+ R L K+E+
Sbjct: 361 TAGYKYYISVTSAAKTKEAHTIWSGYVESKVRMLVQKLEQ 400
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 147/258 (56%), Gaps = 29/258 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL +DE +RSLNG RVA+ +L VP+ FR+ LR +K WA+ +G+YSNV G LGGV
Sbjct: 194 AVLEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLGGV 253
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPI---------EEDELGFS 112
N A+L A VCQ YPNA PS +V RFFR++ W WPNPV++ E ++
Sbjct: 254 NCAILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASRYA 313
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQW 172
W+PR NPRDR+H PI+TPA+P MNSSYNV LR + ++ G +E A W
Sbjct: 314 AWNPRLNPRDRAHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAAHW 373
Query: 173 SA------------------LFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQ 214
A LF P FF +++Y+QVD+ AAD L W W ESR R
Sbjct: 374 RADESPTGDRAADLRDAWRRLFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRLRN 433
Query: 215 LTLKIERDTNGLLQCHPY 232
L + + DT G ++ P+
Sbjct: 434 LVVAL--DTPGYVRARPH 449
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 188/340 (55%), Gaps = 42/340 (12%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D+++VRSLNGCRVA+ +LK VP + F + LR +K WAK G+YSN GF GG++
Sbjct: 180 LLRNLDQESVRSLNGCRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGIS 239
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-----LGFSVWDPR 117
WA+LVAR CQLYPNA S +V R F +++ W WP+PV+L +++D L +WDPR
Sbjct: 240 WAILVARACQLYPNASASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPR 299
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE 177
K DR H MPIITPA+P NS++NV+ ST ++ + G IC++I KA W LF+
Sbjct: 300 KKNSDRFHLMPIITPAFPEQNSTHNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFK 359
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKG-----WVESRFRQLTLKIERDTNGLLQCHPY 232
FF YK+Y+ + +D + +G ++ESR R L +ER+ + +L H
Sbjct: 360 EVKFFSRYKHYIGI----SDHGYIHRRRGIELWRFLESRIRLLVQSLERNQD-ILIAHND 414
Query: 233 PNEYIDPSKPCPNSAF------------FMGLRRKEGVTGKERQQFDIRGTVDNFREEIG 280
N++ +P PN+ F F+GL E T D+ + FR +
Sbjct: 415 TNKH----RPSPNAKFDVRPENTRITIWFIGLEFAEHATN-----LDLTSEIQRFRTNVE 465
Query: 281 MYMFWKPGM------DIYVSHVRRRQLPSFVFPDGYKRPR 314
+ G+ +I + +++R +L S + K+ R
Sbjct: 466 LQASGVKGIGPNSQVEIDMFYMKRTRLFSIIGAAALKKGR 505
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+VL DE TVRSLNGCRV D IL+ VPN + FR+ LR +K WA RG+ SNVTG+LGGV
Sbjct: 179 AVLRGCDEATVRSLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N A++VA++CQLYP A S ++ +FF + W WP + L E+ +G VWDPR R
Sbjct: 239 NLAIMVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTR 298
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKA----QWSALFE 177
D MP+ITPAYP MNS YNV STL VMT +F +C + W LF
Sbjct: 299 DSLALMPVITPAYPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFM 358
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
P FF + Y+Q+++ A DL+ W GWV SR R+L +E
Sbjct: 359 PVPFFTQHTFYIQIEVSADSEQDLVLWDGWVSSRIRRLVRNLE 401
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 148/236 (62%), Gaps = 2/236 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL VP F+ LR +K WA++R +Y+NV GF GGV
Sbjct: 176 NLLKNIDEKDLRALNGTRVTDEILNLVPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGV 235
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ S +V +FF++Y+QW WP PV+L IE+ L VW+P+
Sbjct: 236 AWAMLVARICQLYPNAVSSYIVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSL 295
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ ++FQ G I I W L + + F
Sbjct: 296 DRQHRMPVITPAYPSMCATHNITASTQKIILDEFQRGTTIMHGILDGTKNWLDLLQRHDF 355
Query: 182 FEAYKNYL-QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK YL V + ++ L + G ES+ R L K+E G+ HPY +
Sbjct: 356 FHRYKFYLCVVAATKSTYEEHLKYSGMFESKLRLLVQKLEM-VPGVELAHPYVKSF 410
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 143/221 (64%), Gaps = 1/221 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RS+NG RV D+IL VP FR LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLRGLDEAELRSVNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA++VARVCQLYP A +++VS+FF + +W WPNPV+L PIE+ L VW+P+
Sbjct: 241 AWAMMVARVCQLYPKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRG 300
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M ++YN+S S+L ++ + + + I + I + QW LF + F
Sbjct: 301 DQFHIMPIITPAYPSMCATYNISQSSLSIIKRELERASEISQMIISGRQQWKDLFVKHTF 360
Query: 182 FEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
F + YK Y+ V + + D TW G+VES+ R L +ER
Sbjct: 361 FTSDYKYYISVISASTEKDAQNTWSGFVESKVRVLVQGLER 401
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 176/347 (50%), Gaps = 41/347 (11%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + E RS+NG RV +++L VP FR LR +K W+ RRG+Y V G+ GGV W
Sbjct: 185 LEGLSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAW 244
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A++VAR+CQLYP A + +VS+FF + +W WP PVML IEE ++G VW+P+ DR
Sbjct: 245 AIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDR 304
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
+H MPIITPA+P M +++ V STLR+M E+F + I ++I NK W ALFE + FF
Sbjct: 305 AHLMPIITPAFPSMCATHTVMPSTLRIMKEEFGRADSILQDIFANKKDWKALFERHTFFT 364
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN-------- 234
+ +K YL V + + T+ G V+S+ R + I+ G+ PY
Sbjct: 365 KDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRI 424
Query: 235 -------------EYIDPSKPCP---------------NSAFFMGLRRKEGVTGKERQQF 266
+Y+ P + F++GL TG+ +
Sbjct: 425 TDDQFKEVAQGSLDYLIPKSEADAEGTLEANGDTTIVHTTTFYIGLTLP---TGEATKSL 481
Query: 267 DIRGTVDNFREEI-GMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKR 312
DI V F+ I ++ + M + V H R LP VF +G R
Sbjct: 482 DISYPVSQFKSYITDSDLYNEDLMSVKVVHTRSSALPDDVFVEGETR 528
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 137/210 (65%), Gaps = 2/210 (0%)
Query: 28 VPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFF 87
VP F+ LRC+K WA++R VY N+ GF GGV WA+LVAR+CQLYPNA+ S++V +FF
Sbjct: 2 VPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKFF 61
Query: 88 RVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLST 147
+YT+W WP PV+L IE+ L VW+PR P DR H MP+ITPAYP M +++N++ ST
Sbjct: 62 NIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSST 121
Query: 148 LRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAAD-ADDLLTWKG 206
+V+ + G+ I ++I K WS LFE + FF YK YL V D A++ W G
Sbjct: 122 QKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKKWSG 181
Query: 207 WVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
++ES+ RQL LK+E G+ HPY ++
Sbjct: 182 FIESKLRQLVLKLEV-AEGVEIAHPYVKDF 210
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 139/232 (59%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D IL VP FR LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLRGLDEADLRSLNGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S +V +FFR+ +W+WP PV+L I L VW+PR
Sbjct: 241 AWAMLVARVCQLYPKATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKH 300
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MPIITPAYP M +++N++ ST ++ + + G I ++I K QW LF + F
Sbjct: 301 DSFHLMPIITPAYPSMCATHNITRSTKEIIQRELKRGGNITDQIMSGKLQWKDLFAKHTF 360
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F E YK YL V + + W G VES+ R L L +E + + HP+
Sbjct: 361 FTEGYKYYLSVISASTTREAQNIWGGLVESKIRLLVLSLE-GHDSIALAHPF 411
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 185/349 (53%), Gaps = 41/349 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE+ +RSLNG RV D+I+ VP FR+ LR +K WA+RR +Y+N+ GF GGV
Sbjct: 183 NLLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGV 242
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF + +W WP PV+L +EE L VW+P+
Sbjct: 243 AWAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRG 302
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ S + V+ + Q G I + + L+K W LF + F
Sbjct: 303 DQFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTF 362
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLK---------------IERDTNG 225
F YK Y+ V + + W G+VES+ ++ +L+ + T G
Sbjct: 363 FTSGYKYYISVVTTSTTKEAHKIWSGYVESKVQEGSLQYLAGQETTETPNPEIVVAKTEG 422
Query: 226 LLQCHPYPNEYIDPS---------------KPCPNSAF----FMGLRRKEGVTGKERQQF 266
L P + + + P + F ++GL EG +
Sbjct: 423 GLALDGLPLDGTTETGTEANGTGEGVEEEVQTWPTNVFTTTHYIGLELGEGA-----KSL 477
Query: 267 DIRGTVDNFREEIGMYMFWKPGMD-IYVSHVRRRQLPSFVFPDGYKRPR 314
D+ VD+F++ G + + ++ + V HVR LP +F G K+P+
Sbjct: 478 DLSYQVDSFKQLCGQWEKYSAKLNHLTVQHVRNFNLPDDLFEPGEKKPQ 526
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 185/319 (57%), Gaps = 14/319 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D+++VRSLNG RVA+++L+ VPN E F MTLR +K WAK GVYSN GF GG+
Sbjct: 183 NLLKNMDQESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGI 242
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC-PIEE--DELGFSVWDPRK 118
WA+LVAR CQLYPNA PS LV + F V++ W +P+P++LC P E D L +
Sbjct: 243 TWAILVARACQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGR 302
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
N DR H MPIITPA+P NS++NVS ST+ V+ ++ IC ++ K W LFE
Sbjct: 303 NHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMTDALTICNDVFEGKCDWKHLFEE 362
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F+ YK+++ + + A + ++ G++ESR R L ER+ G+ H P +
Sbjct: 363 VNFYSQYKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQP 421
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG---MDIYVSH 295
SK S +F+GL E V + D+ ++NF+ + + G +++ +S+
Sbjct: 422 TSK--SQSLWFIGLEFDEVV-----KNMDLTREINNFKWNLNVQAKQIAGFEDVELDISY 474
Query: 296 VRRRQLPSFVFPDGYKRPR 314
V+R L ++ K+ R
Sbjct: 475 VKRSHLIKYLPAAELKKGR 493
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 179/315 (56%), Gaps = 18/315 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE+ + SLNG RV D++L VPNV+ F LRC+K+WAKRR VY N G+ GGV
Sbjct: 177 TLLKSMDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGV 236
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
++L VARVCQLYPNA +V +FF +++ W+WP PV+L P+ + VWDP+ P
Sbjct: 237 AFSLCVARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPS 296
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++NVS ST V+T +F + I +E N + +FE F
Sbjct: 297 DKYHRMPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNLEKN--DFRRIFELSDF 354
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----- 236
F YK +++V ++ + W+G+VESR R L K E + +L P+P +
Sbjct: 355 FGRYKLFVEVLAMSTLEEGFTKWEGYVESRIRILASKFEA-VDDILYAIPFPKAFRVLEE 413
Query: 237 -IDPSKPCPN-----SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMD 290
I KP +AFF+ + V + ++ + V F E + Y + M
Sbjct: 414 SIGKIKPGAEEVKRCTAFFIAI----DVIPVKGKKVVVEQQVKEFMEFVKEYEGKESNMW 469
Query: 291 IYVSHVRRRQLPSFV 305
I ++ ++R+ + F+
Sbjct: 470 IEINSLKRKDVQGFL 484
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 179/317 (56%), Gaps = 22/317 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE+ + SLNG RV D++L VPNV+ F LRC+K+WAKRR VY N G+ GGV
Sbjct: 177 TLLKSMDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGV 236
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
++L VARVCQLYPNA +V +FF +++ W+WP PV+L P+ + VWDP+ P
Sbjct: 237 AFSLCVARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPS 296
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++NVS ST V+T +F + I E N + +FE F
Sbjct: 297 DKYHRMPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNPEKN--DFRRIFELSDF 354
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----- 236
F YK +++V ++ + W+G+VES+ R L K E + +L P+P +
Sbjct: 355 FSRYKLFVEVLAMSTSEEGFAKWEGYVESKIRILASKFEA-VDDILYAIPFPKAFRVGEE 413
Query: 237 ----IDPS----KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG 288
I P K C +AFF+ + + + ++ + V F E I Y +
Sbjct: 414 SIRKIRPGASEVKKC--TAFFIAI----DIIPVKGKKVVVEQQVKEFMEFIKEYEGKESS 467
Query: 289 MDIYVSHVRRRQLPSFV 305
M I V+ ++++ + F+
Sbjct: 468 MRIEVNSLKKKDIQGFL 484
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 142/219 (64%), Gaps = 6/219 (2%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + VRSLNGCR D+IL+ VPN+++FR+ LR +K WAK+ G+YSN G+ GGV+
Sbjct: 165 LLKNLDPKLVRSLNGCRATDEILRPVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVS 224
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
W +LVAR CQL PN + + V +FF V+ +W+WP PV L + LGF VWD R N +D
Sbjct: 225 WGMLVARTCQL-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQD 283
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H M IITPAYP NS+++VS ST +VM +F +I +EI L KA W LFE FF
Sbjct: 284 RFHLMSIITPAYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFEAPSFF 343
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
Y+ ++ + + + + DD L ES+ R L +ER
Sbjct: 344 FKYRYFIVLLVTSNNTDDHLE-----ESKIRYLIQNLER 377
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 175/347 (50%), Gaps = 42/347 (12%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + E RS+NG RV +++L VP FR LR +K W+ RRG+Y V G+ GGV W
Sbjct: 185 LEGLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAW 244
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A++VAR+CQLYP A + +VS+FF + +W WP PVML IEE +LG VW+P+ DR
Sbjct: 245 AIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDR 304
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
+H MPIITPA+P M +++ V STLR+M ++F ++I + I W+ALFE + FF
Sbjct: 305 AHLMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFT 364
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN-------- 234
+ +K YL V + + T+ G V+S+ R + I+ G+ PY N
Sbjct: 365 KDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRC 424
Query: 235 -------------EYIDPSKPCP---------------NSAFFMGLRRKEGVTGKERQQF 266
EY+ P+ P + F++GL T +
Sbjct: 425 KDDQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLTLPPDAT----KSL 480
Query: 267 DIRGTVDNFREEI-GMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKR 312
DI V FR I ++ + M + V H R LP VF G R
Sbjct: 481 DISYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 183/317 (57%), Gaps = 22/317 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE+ + SLNG RV D++L VP+V+ F LRC+K+WAKRR VY N G+ GGV
Sbjct: 177 TLLKSMDEKCILSLNGSRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGV 236
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
++L VARVCQLYPNA +V +FF +++ W+WP PV+L P+ + VWDP+ P
Sbjct: 237 AFSLCVARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPS 296
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++NVS ST V+T +F ++I + E N + +FE F
Sbjct: 297 DKYHRMPVITPAYPSMCATHNVSNSTQHVITMEFTRAHKILSDPERN--DFRRIFELSDF 354
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----- 236
F Y+ +++V +++ +D W+G++ES+ R L K E + +L P+P +
Sbjct: 355 FSRYRLFVEVLAMSSCEEDFPKWEGYLESKIRILASKFE-AVDDVLYAIPFPKAFRVAEE 413
Query: 237 --------IDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG 288
++ K C +AFF+ + V + ++ + V F E + Y G
Sbjct: 414 SIEKIGPRMEGMKKC--TAFFIAI----DVIPVKGKKVIVEQQVKEFIEFVREYEGRASG 467
Query: 289 MDIYVSHVRRRQLPSFV 305
M I V+ ++R+ + F+
Sbjct: 468 MRIEVNSLKRKDVQGFL 484
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 141/220 (64%), Gaps = 1/220 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F++ LR +K WA+RR +Y+N+ GF GGV
Sbjct: 186 LLRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVA 245
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V++FF + +W WP PV+L +E L VW+P+ D
Sbjct: 246 WAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGD 305
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MP+ITPAYP M ++YN++ S + V+ ++ Q G I + I L ++ WS LF + FF
Sbjct: 306 QFHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRSPWSDLFVKHTFF 365
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
+ YK Y+ V + D + W G+VES+ R L +E+
Sbjct: 366 TQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQ 405
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 140/232 (60%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D IL VP FR LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S ++ +FFR+ +QW+WP PV+L I+ +L VW+PR
Sbjct: 241 AWAMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKG 300
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MPIITP+YP M +++N++ ST ++ + G I + I KA W LF + F
Sbjct: 301 DGYHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTF 360
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F + YK YL V + + L W G VES+ R L +E + + HP+
Sbjct: 361 FTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVE-NHESIALAHPF 411
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 142/230 (61%), Gaps = 1/230 (0%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + E RS+NG RV +++L VP FR LR +K W+ RRG+Y V G+ GGV W
Sbjct: 185 LEGLSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAW 244
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A++VAR+CQLYP A + +VS+FF + +W WP PVML IEE ++G VW+P+ DR
Sbjct: 245 AIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDR 304
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
+H MPIITPA+P M +++ V STLR+M E+F ++I ++I NK W ALFE + FF
Sbjct: 305 AHLMPIITPAFPSMCATHTVMPSTLRIMKEEFGRADKILQDIFANKKDWKALFERHTFFT 364
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
+ +K YL V + + T+ G V+S+ R + I+ G+ PY
Sbjct: 365 KDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 145/235 (61%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F++ LR +K WA+RR +Y+N+ GF GGV
Sbjct: 186 LLRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVA 245
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V++FF + +W WP PV+L +E L VW+P+ D
Sbjct: 246 WAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGD 305
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MP+ITPAYP M ++YN++ S + V+ ++ Q G I + I L + WS LF + FF
Sbjct: 306 QFHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRNPWSDLFVKHTFF 365
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK Y+ V + D + W G+VES+ R L +E+ + L H + Y
Sbjct: 366 TQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY 419
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 175/347 (50%), Gaps = 42/347 (12%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + E RS+NG RV +++L VP FR LR +K W+ RRG+Y V G+ GGV W
Sbjct: 185 LEGLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAW 244
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A++VAR+CQLYP A + +VS+FF + +W WP PVML IEE +LG VW+P+ DR
Sbjct: 245 AIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDR 304
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
+H MPIITPA+P M +++ V STLR+M ++F ++I + I W+ALFE + FF
Sbjct: 305 AHLMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFT 364
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN-------- 234
+ +K YL V + + T+ G V+S+ R + I+ G+ PY N
Sbjct: 365 KDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRC 424
Query: 235 -------------EYIDPSKPCP---------------NSAFFMGLRRKEGVTGKERQQF 266
EY+ P+ P + F++GL T +
Sbjct: 425 KDDQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLTLPPDAT----KSL 480
Query: 267 DIRGTVDNFREEI-GMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKR 312
DI V FR I ++ + M + V H R LP VF G R
Sbjct: 481 DISYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 145/225 (64%), Gaps = 6/225 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +D+ TVR++ G RV D+IL VP + FR LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 184 NLLMGLDQPTVRAVTGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGV 243
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE-----LGFSVWDP 116
WA+LVARVCQLYP+A+ + +V +FF V + W WP PVML IE+ + GF VW+P
Sbjct: 244 AWAMLVARVCQLYPHAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNP 303
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF 176
P DR + MPIITPA+P M ++YN+S S +V+ + + G I +I KA+WS LF
Sbjct: 304 AIYPGDRKNIMPIITPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKAKWSDLF 363
Query: 177 EPYLFFEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
+ + FF A +K YL + + +AD W G VES+ R +++E
Sbjct: 364 KKHTFFTADHKYYLSITASSLNADSAKAWAGLVESKVRIFVMQLE 408
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 179/323 (55%), Gaps = 8/323 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGF--LG 59
S L ++D + +RSLNG RV D+IL VPN E+FR+TLR +K WAKR+ + + + + L
Sbjct: 147 SSLKSLDIRCIRSLNGFRVTDEILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLC 206
Query: 60 GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKN 119
++WA+L C++Y N S V+R + ++ WPNPV+L EE L VWDPR N
Sbjct: 207 LISWAVLSXITCKIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVN 266
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P DR H MPIITPAYP NS+YNVS ST +M E+F+ G + +EI K+ W L EP
Sbjct: 267 PSDRYHLMPIITPAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADEIFQGKSDWPKLLEPP 326
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYPNEY 236
FF+ YK+Y+ + ++ + L W G VES+ R L +ER+ T + +P
Sbjct: 327 NFFQKYKHYIVLTASSSTEEHHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNR 386
Query: 237 IDPSKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDNFREEIGMYMFWKPGMDIYV 293
P + S +F+G+ K+ + +DI+ D + K GM I
Sbjct: 387 TQPKESDYVSLWFLGIIFKKAENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 446
Query: 294 SHVRRRQLPSFVFPDGYKRPRPS 316
+HV+++QL ++ D ++ + S
Sbjct: 447 THVKKKQLHYYLPADLLQKRKKS 469
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 140/232 (60%), Gaps = 2/232 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE +RSLNG RV D IL VP FR LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S ++ +FFR+ +QW+WP PV+L I+ +L VW+PR
Sbjct: 241 AWAMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKG 300
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MPIITP+YP M +++N++ ST ++ + G I + I KA W LF + F
Sbjct: 301 DGYHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTF 360
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F + YK YL V + + L W G VES+ R L +E + + HP+
Sbjct: 361 FTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVE-NHESIALAHPF 411
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 143/222 (64%), Gaps = 3/222 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL VP + F++ LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 183 NLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGV 242
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE--LGFSVWDPRKN 119
WA+LVARVCQLYP A +++V +FF + W WP PV+L IE ++ +VW+P+
Sbjct: 243 AWAMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIY 302
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P DR+H MPIITP+YP M +++NV S++ V+ ++ + G +I EEI L K W LFE +
Sbjct: 303 PSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKH 362
Query: 180 LFF-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
FF +K YL V + TW G+VESR R L K+E
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 144/235 (61%), Gaps = 2/235 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE +RSLNG RV D+IL VP F++ LR +K WA+RR +Y+N+ GF GGV
Sbjct: 186 LLRGLDEAELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRRAIYANIMGFPGGVA 245
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V++FF + +W WP PV+L +E L VW+P+ D
Sbjct: 246 WAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGD 305
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H MP+ITPAYP M ++YN++ S + V+ ++ G I + I + K WS LF + FF
Sbjct: 306 QFHLMPVITPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVGKNPWSDLFVKHTFF 365
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK Y+ V + D + W G+VES+ R L +E+ + L H + Y
Sbjct: 366 TQGYKYYISVITASTDKEAHKIWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY 419
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 177/348 (50%), Gaps = 43/348 (12%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L+ + EQ +RS+NG RV ++L VP+ FR LR +K W+ RG+Y V G+ GGV W
Sbjct: 183 LDGLAEQAMRSVNGTRVTKELLAAVPHPGSFRHALRAIKLWSNERGIYGAVFGYPGGVAW 242
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A++VAR+CQLYP A + +VS+FF + +W WP PV+L IEE +G VW+P+ DR
Sbjct: 243 AIMVARICQLYPFANGATIVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDR 302
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF- 182
SH MPIITPA+P M S++ V STLR+M E+FQ ++I + I W ALFE + FF
Sbjct: 303 SHLMPIITPAFPSMCSTHTVMPSTLRIMQEEFQRADQIMQHIFAGTKTWDALFERHSFFT 362
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN-------- 234
+ +K YL + + + + G V+S+ R + I+ G+ PYP
Sbjct: 363 KDHKYYLTIVAASRTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYPKCFERVHRC 422
Query: 235 --------------EYIDPSKPCP---------------NSAFFMGLRRKEGVTGKERQQ 265
+Y+ P+ P +++++GL VT + +
Sbjct: 423 TNEDQVFEVSQGSLKYMIPASEVPAEGASLANGDAQIMYTASWYIGLT----VTTEGGRA 478
Query: 266 FDIRGTVDNFREEI-GMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKR 312
DI V FR I +F M + V H R LP +F G R
Sbjct: 479 LDISYPVSQFRSFITDAEVFDDKTMSVKVIHTRNTALPDDLFLPGETR 526
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 143/222 (64%), Gaps = 3/222 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL VP + F++ LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 183 NLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGV 242
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE--LGFSVWDPRKN 119
WA+LVARVCQLYP A +++V +FF + W WP PV+L IE ++ +VW+P+
Sbjct: 243 AWAMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIY 302
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P DR+H MPIITP+YP M +++NV S++ V+ ++ + G +I EEI L K W LFE +
Sbjct: 303 PSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKH 362
Query: 180 LFF-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
FF +K YL V + TW G+VESR R L K+E
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 189/386 (48%), Gaps = 67/386 (17%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +D+ +RS+NG RV D I+ VP FR LR +K WA+RR +Y+N+ GF GGV
Sbjct: 181 NLLTGLDDAGLRSVNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S ++ +FFR+ +W+WP PV+L I+ +L VW+PR
Sbjct: 241 AWAMLVARVCQLYPQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKS 300
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MPIITP+YP M +++NV+ ST ++ + G I + I + KA W LF+ + F
Sbjct: 301 DSFHLMPIITPSYPSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKAPWKDLFQKHTF 360
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY-------- 232
F + YK YL V + + L W G VES+ R L +E + L HP+
Sbjct: 361 FTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVTNLETHESIAL-AHPFNKGFERVH 419
Query: 233 -----------------------PNEYIDPS-----------------KPCP-------- 244
P DPS +P P
Sbjct: 420 KCSSEDEIESVKEGGHQYQIYEIPTVTTDPSHDPSLGIAVKDQNGDVPEPEPEKKETMVY 479
Query: 245 NSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMD-IYVSHVRRRQLPS 303
+ F++GL +EG + D+ VD+F++ + + ++ + V H R LP
Sbjct: 480 TTTFYIGLELREGA-----KSLDLAWCVDDFKDRCRSWEKYNEELNTLSVIHTRNCDLPD 534
Query: 304 FVFPDGYKRPRPSRHFNEQAGKPCED 329
VF +G +P S+ ++ +P D
Sbjct: 535 DVFTEGEVKPTRSQ---KKKKRPASD 557
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 140/221 (63%), Gaps = 1/221 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE+ +RSLNG RV D+I+ VP FR+ LR +K WA+RR +Y+N+ GF GGV
Sbjct: 183 NLLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGV 242
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF + +W WP PV+L +EE L VW+P+
Sbjct: 243 AWAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRG 302
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ S + V+ + Q G I + + L+K W LF + F
Sbjct: 303 DQFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTF 362
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
F YK Y+ V + + W G+VES+ R L +E+
Sbjct: 363 FTSGYKYYISVVTTSTTKEAHKIWSGYVESKVRVLVQGLEQ 403
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 157/271 (57%), Gaps = 9/271 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE+ + SLNG RV D IL+ +P V+ F LR +KFWAKRR +Y N G+ GGV
Sbjct: 171 TILRSMDEKCILSLNGSRVTDAILRLIPRVDVFHSALRAIKFWAKRRYIYGNAYGYFGGV 230
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+++ VAR+CQ+YPN +V +FF Y+ W+WP PV LC I + VWDP+ P
Sbjct: 231 TFSICVARICQMYPNLCAYDIVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPA 290
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITP YP +NS++NV+ ST ++ + GN E+ +KA +S LFE F
Sbjct: 291 DKYHKMPVITPVYPSINSTHNVTQSTFILICSELARGN----ELMRSKAPFSKLFEVSGF 346
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F+ +K +++V I + D W+G+++S+ R L K+E N L P+P + S
Sbjct: 347 FKKHKMFIEVRINSEDLQAFNIWEGYIQSKIRILCTKLENLENISLAA-PFPKAFTGRSC 405
Query: 242 PCPNSAFFMGL----RRKEGVTGKERQQFDI 268
N+ G + G++ K + F +
Sbjct: 406 KASNTDNIGGAASTGSKSSGISNKIEEYFTL 436
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 137/221 (61%), Gaps = 1/221 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE+ +RS+NG RV D+IL VP FR LR +K WA+RR +Y N+ GF GGV
Sbjct: 182 NLLRGLDEKELRSVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF + QW WP PV+L PI + L VW+PR
Sbjct: 242 AWAMLVARVCQLYPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKG 301
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MP+ITPAYP M +++NV+ S++ V+ + Q I I + W +F + F
Sbjct: 302 DSYHLMPVITPAYPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTKPWKDMFAKHTF 361
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
F + +K Y+QV + D + W G+VES+ R L +ER
Sbjct: 362 FTKDFKYYMQVISASRDKEAHKIWSGFVESKVRMLVQSLER 402
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
+ E VRSLNG RV D+IL VP + F++ LR +K WA+RR +Y+N+ G+ GGV WA+L
Sbjct: 188 LSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAML 247
Query: 67 VARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE--LGFSVWDPRKNPRDRS 124
VARVCQLYP A +++V +FF + W WP PV+L IE ++ +VW+P+ P DR+
Sbjct: 248 VARVCQLYPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRN 307
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF-E 183
H MPIITP+YP M +++NV S++ V+ ++ + G +I EEI L K W LFE + FF
Sbjct: 308 HKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKRPWKDLFEKHTFFTN 367
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
+K YL V + TW G+VESR R L K+E
Sbjct: 368 GFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 141/234 (60%), Gaps = 5/234 (2%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ N+DE+ VRS+NG RV + IL V N F++ L+ ++ WAKRR VYSN GFLGGV+
Sbjct: 187 LMRNMDERDVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVS 246
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELGFSVWDPRKNPR 121
WA+LV+R+CQLYP A PSM+V FF +++QW WP PV L E L VWDPR NP
Sbjct: 247 WAILVSRICQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPS 306
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MPI+TP+YP NS+YNV S ++ + + G + ++K WS LFE F
Sbjct: 307 DQYHLMPILTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKGSWSNLFEAAFF 366
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPY 232
F+ Y++Y+ V +V + G VESR R L E + + CH Y
Sbjct: 367 FQ-YRHYVVVIVVGNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAY 419
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 171/305 (56%), Gaps = 10/305 (3%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
+DE+ + S+NG RV D +L +PN E F M LR +KFWAKRR +Y N G+ GGV +++
Sbjct: 179 MDEKCILSINGSRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSIS 238
Query: 67 VARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHH 126
VAR+CQLYPN +V ++F Y+ W WP P++L PI + VWD +K P DR H
Sbjct: 239 VARICQLYPNKSSYDIVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHK 298
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYK 186
MPIITPAYP M S++NV ST ++ +F+ I +N + +F+ FF YK
Sbjct: 299 MPIITPAYPSMCSTHNVFQSTFDLICREFRRSTEIINN-SINSTDFLQIFDNTDFFRKYK 357
Query: 187 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNS 246
Y+ + V AD + + +W G+VES+ R L K E ++ P+P +I + C
Sbjct: 358 LYINIK-VKADKESIKSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPFI-KDETC--- 411
Query: 247 AFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVF 306
FF+G+ + TG + ++ + G + F + + + M I +S +++ + +F F
Sbjct: 412 NFFIGIEILK--TGSQNKKIYVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQTF-F 468
Query: 307 PDGYK 311
+ +K
Sbjct: 469 KNFFK 473
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 130/188 (69%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ +R+LNG RV D+IL+ VP F+ LR +K WA++R VY+NV GF GGV
Sbjct: 174 NLLKNIDEKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGV 233
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVAR+CQLYPNA+ ++++ +FF++Y+QW WP PV+L IE+ L VW+PR
Sbjct: 234 AWAMLVARICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAM 293
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MP+ITPAYP M +++N++ ST +++ +F G I EI + WS L E + F
Sbjct: 294 DRQHRMPVITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSF 353
Query: 182 FEAYKNYL 189
F YK YL
Sbjct: 354 FHQYKFYL 361
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 150/264 (56%), Gaps = 22/264 (8%)
Query: 56 GFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWD 115
GFLGGV+WA+LVAR CQLYPNA S LV +FF V+++W WPNPV+L EE L VWD
Sbjct: 3 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 62
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSAL 175
PR NP DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L
Sbjct: 63 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL 122
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPY 232
EP FF+ Y++Y+ + A+ ++ L W G VES+ R L +ER+ T + +
Sbjct: 123 LEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 182
Query: 233 P--------NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGM 281
P N Y+ S +F+G+ RR E +DI+ D +
Sbjct: 183 PGNKEHHKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANN 234
Query: 282 YMFWKPGMDIYVSHVRRRQLPSFV 305
K GM I +HV+++QL ++
Sbjct: 235 INMLKEGMKIEATHVKKKQLHHYL 258
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 139/219 (63%), Gaps = 10/219 (4%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + VRSLN CR D+IL+ VPN+++FR+ LR K WAK+ G+YSN G+ GGV+
Sbjct: 102 LLKNLDPKLVRSLNRCRATDEILRLVPNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVS 161
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQL PN + + V +FF V+++W+W +PV L + LGF VWDPR N +
Sbjct: 162 WAMLVARTCQL-PNVVAATQVHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQG 220
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP ST +VM +F G +I +EI L KA W LFE FF
Sbjct: 221 RFHLMPIITPAYPH---------STRKVMLNEFSRGMQITDEIMLGKAGWDKLFEAPSFF 271
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
Y+ + + + + + DDLL W VES+ R L +ER
Sbjct: 272 FKYRYIIVLLVTSNNTDDLLEWCELVESKIRYLIQNLER 310
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 147/238 (61%), Gaps = 4/238 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL VP F++ LR +K WA+R+ +Y+N+ GF GGV
Sbjct: 179 TLLRGLSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRKN 119
WA+LVARVCQLYP A +++V++FF + +W WP PV+L IE + VW+P+
Sbjct: 239 AWAMLVARVCQLYPKATSAVVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLY 298
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
DR+H MPIITPAYP M +++N++ S+ V+ ++ + G ++ EEI +A W ALF +
Sbjct: 299 SSDRNHRMPIITPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRAPWKALFTKH 358
Query: 180 LFFEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
FF + ++ YL V + D W G++ESR R L KIE ++ P+ Y
Sbjct: 359 TFFTSDFRYYLTVISSSRTKDAQNVWSGFIESRVRVLVNKIENHA-AIVLARPFNKGY 415
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE+ +RS+NG RV D+I+ VP FR LR +K WA+RR +Y N+ GF GGV
Sbjct: 182 NLLRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF + +W WP PV+L IE+ L +W+P+ P
Sbjct: 242 AWAMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPG 301
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP M +++N++ S+ V+ + + I + K W LF+ + F
Sbjct: 302 DRYHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTF 361
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
F + +K Y+QV + D + W G+VES+ R L +ER
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 402
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 146/235 (62%), Gaps = 3/235 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L ++DE+ + SLNG RV D++L VPNV F LRC+K+WAKRR VY N G+ GGV
Sbjct: 177 TLLKSMDEKCILSLNGSRVTDEMLNLVPNVNTFHSALRCIKYWAKRRCVYGNPYGYFGGV 236
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
++L VARVCQLYPNA +V +FF +++ W+WP PV+L P+ + VWDP+ P
Sbjct: 237 AFSLCVARVCQLYPNASSFSIVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPS 296
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP M +++NVS ST V++ +F + I E N + +F+ F
Sbjct: 297 DKYHRMPVITPAYPSMCATHNVSNSTQHVISMEFARAHEILSSPEKN--DFRKIFDLSDF 354
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
F YK + ++ ++ + + W+G+VES+ R L K E + +L P+P +
Sbjct: 355 FSRYKLFAEILAMSTEEEGFPKWEGYVESKVRILASKFEA-VDDILYAIPFPKAF 408
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE+ +RS+NG RV D+I+ VP FR LR +K WA+RR +Y N+ GF GGV
Sbjct: 182 NLLRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF + +W WP PV+L IE+ L +W+P+ P
Sbjct: 242 AWAMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPG 301
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP M +++N++ S+ V+ + + I + K W LF+ + F
Sbjct: 302 DRYHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTF 361
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
F + +K Y+QV + D + W G+VES+ R L +ER
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 402
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 179/332 (53%), Gaps = 35/332 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL VD T +SLNG RV + ++K PN E F LR ++ WAKRRG+YSN G+LGGVN
Sbjct: 183 VLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVN 242
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
W +LV + QLYP A PS L+ RFF V W+WP + LC + LG VW+ +
Sbjct: 243 WCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HN 301
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK--AQWSALFEPYL 180
R MPI+TPAYP MNSS+NVS +L VM E+F+ G I +++ L+K ++W LFEP
Sbjct: 302 RYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSD 360
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI--- 237
FF +++YL V++ ++ W G+ ESR R+L + + L + Y ++
Sbjct: 361 FFAVHQHYLAVEVYTEKQEEEAAWCGFCESRMRKLVESLAYNP-ALCRLRAYTKKFPLSF 419
Query: 238 -----DPSKPCPNSA-----------FFMGL---RRKEGVTGKERQQFDIRGTVDNFREE 278
P+ PN A F++G RR+ ++ I +V+ F+
Sbjct: 420 VTGGEAPAGEQPNGAALAQPSKFGVCFYVGFDIDRRQ-----LRSREVSIDNSVEYFKNN 474
Query: 279 IGMYMFWK--PGMDIYVSHVRRRQLPSFVFPD 308
+Y + K P MD+ V+ V + LP VF D
Sbjct: 475 -DLYRWNKRTPTMDVRVTPVVWKALPESVFED 505
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 177/342 (51%), Gaps = 34/342 (9%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
M V+ +D +VRSL+ RVA IL+ VPN +R LR ++ WA+RRG+YSN GFLGG
Sbjct: 310 MQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGG 369
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC-PIEEDELGFSV-WDPRK 118
++WA+LV VCQ++P A + LV RFF V WRWP P+++ P + V WDP+
Sbjct: 370 ISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQH 429
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIEL----NKAQWSA 174
N DR+H MPIITP +P +N++ NV++STLRV+ E+F G RI +++ + + W+
Sbjct: 430 NIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQ 489
Query: 175 LFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
LF P Y +++ +++ A + + L W +V SR R+L ++ T + HP P+
Sbjct: 490 LFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSISALHPLPD 548
Query: 235 E------------------YID-----PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGT 271
+I PS P P R +T +++
Sbjct: 549 LVRAQGHETDESDAVVGYFFIGYTVNVPSTPQPRRGDRRHSARSPVITKNSQEELAKNSV 608
Query: 272 VDNFR----EEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDG 309
R E+ KPGM + +++ LPS +FP G
Sbjct: 609 ASATRYFLATELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 179/288 (62%), Gaps = 10/288 (3%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+ +L +DE+++R+LNG RVA+ +++ N + F+ L+C+K WA+ R +YSN+ G+L G
Sbjct: 186 IQILQGMDEKSIRALNGYRVAEWFNQNIKNKDTFKKALKCIKLWAQNRCIYSNILGYLNG 245
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEEDELGFSVWDPRKN 119
+ W++LVA++CQLYPN ++ RFF +Y++W+W + V + I+ED + +
Sbjct: 246 IAWSILVAKICQLYPNYFVYGIIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWV 305
Query: 120 PRDRS-HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSA--LF 176
P ++ +M IITP +PC+N +YNV+ STLRV+ EQFQ+G RI +EI+ N++ + LF
Sbjct: 306 PENKGISNMMIITPCFPCINCAYNVTESTLRVIQEQFQYGYRILDEIQKNQSHYDYQDLF 365
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER-DTNGLLQCHPYPNE 235
+P+ FF+ Y +LQ+ I+A + ++ WKG VE R+LT IE + ++ HP+ ++
Sbjct: 366 KPFEFFKRYNAFLQIRILAKNKNEYFQWKGHVEINLRKLTKIIENGKLSKIILIHPF-SK 424
Query: 236 YIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYM 283
+ID + +G G+ K+ Q DI+ + F EEI ++
Sbjct: 425 FIDLCLKEQLGDYSLGCVYFYGIKVKDNQN-DIQIS---FEEEIKKFL 468
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 136/219 (62%), Gaps = 2/219 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ N+DE+ VRS+NG RV + IL V N F++ L+ ++ WAKRR VYSN GFLGGV+
Sbjct: 183 LMRNMDERDVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVS 242
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELGFSVWDPRKNPR 121
WA+LV+R+CQLYP A PSM+V FF +++QW WP PV L E L VWDPR NP
Sbjct: 243 WAILVSRICQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPS 302
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MPI+TP+YP NS+YNV S ++ + + G + ++K WS LFE F
Sbjct: 303 DQYHLMPILTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKRSWSNLFEAAFF 362
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
F+ Y++Y+ V +V + G VESR R L E
Sbjct: 363 FQ-YRHYVVVIVVGNVKHTFIELCGLVESRLRVLVSNFE 400
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE+ +RS+NG RV D+I+ VP FR LR +K WA+RR +Y N+ GF GGV
Sbjct: 55 NLLRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGV 114
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A S++V++FF + +W WP PV+L IE+ L +W+P+ P
Sbjct: 115 AWAMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPG 174
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP M +++N++ S+ V+ + + I + K W LF+ + F
Sbjct: 175 DRYHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTF 234
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
F + +K Y+QV + D + W G+VES+ R L +ER
Sbjct: 235 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 275
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 194/362 (53%), Gaps = 53/362 (14%)
Query: 8 DEQTVRSLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKR-------------RGVYSN 53
+++ +RS+NGCRVAD +L+ +P N++ FR LR +K WAK RGVYSN
Sbjct: 177 EDEIMRSINGCRVADAVLEVMPSNLQTFRTALRAVKLWAKHNLTRSNQTVRTSGRGVYSN 236
Query: 54 VTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQW-----------------RWP 96
V G+ GG++ +LV R+CQLYPNA S ++ +FFRVY+ W W
Sbjct: 237 VHGYFGGIHLVILVTRICQLYPNAAASTILCKFFRVYSDWYGSNWIKHAREIWLAHGEWM 296
Query: 97 N-PVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQF 155
N P+ + +++ LG WDPR NPRDR MPIITP YP N+++NV+ STL + +F
Sbjct: 297 NSPIKIKDVDDLHLGKRQWDPRSNPRDRYDLMPIITPVYPQQNAAFNVNESTLHRIVTEF 356
Query: 156 QWGNRICEEI--ELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFR 213
G+R+C++I + WSA++EP FF+ Y+ +++V AA D ++G VES R
Sbjct: 357 SRGHRVCQDIMRASSNVPWSAVWEPIRFFDEYQYFVRVVASAATESDRTEFEGLVESTVR 416
Query: 214 QLTLKIERDTNGLLQCHPYPNEYI-DP--------SKPCP-NSAFFMGLR---RKEGVTG 260
L L ++ T+ + YP Y DP + P +A+++ L ++EG
Sbjct: 417 HLVLNLQY-TDNVAYAMAYPKAYHEDPVADKDGTEATTGPWRTAWYLALEFGIKQEGRIE 475
Query: 261 KERQQFDIRGTVDNFR-----EEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRP 315
+ D++G + F + M + + M++ V +++ +LP +++P G R
Sbjct: 476 PAPSKLDLQGPLVAFYGRLRDRTVTMSRYDETTMNVDVQAMKQSKLPGYLYPGGVNPHRK 535
Query: 316 SR 317
R
Sbjct: 536 VR 537
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 146/242 (60%), Gaps = 12/242 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL VP F++ LR +K WA+R+ +Y+N+ GF GGV
Sbjct: 182 NLLRGLSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGV 241
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML------CPIEEDELGFSVWD 115
WA+LVARVCQLYP A +++V++FF + +W WP PV+L CP+ +VW+
Sbjct: 242 AWAMLVARVCQLYPKATSAVIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTR----VAVWN 297
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSAL 175
P+ DR+H MPIITPAYP M +++NV ST+ V+ ++ + G +I +EI + + W L
Sbjct: 298 PKLYASDRNHKMPIITPAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRRPWKDL 357
Query: 176 FEPYLFF-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
F + FF +K YL V + W G++ESR R L K+E + +L P+
Sbjct: 358 FTKHTFFTNGFKYYLTVISSSRTKQAQNAWSGFIESRVRLLVNKLEMHPDIVL-ARPFNK 416
Query: 235 EY 236
Y
Sbjct: 417 GY 418
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 144/244 (59%), Gaps = 3/244 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E +R +NG RV D+IL+ VP FR+ LR +K WA+RR +Y NV GF GGV
Sbjct: 180 NLLRGLTEVDLRCVNGTRVTDRILQLVPQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+A++VAR+CQLYP A M+V +FF V + W+WP + L E+ L WDP N
Sbjct: 240 AYAMMVARICQLYPRAAAPMIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRW 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYPCMNS+ ++ ST V+ + + G+ I EEI K QW LF F
Sbjct: 300 DKMHLMPVITPAYPCMNSTMSIMPSTKAVLLTELKRGHDIMEEIYGGKKQWKDLFVKQKF 359
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER-DTNGLLQCHPYPNEYIDP 239
F EAY++Y+ V + W G V+SR R+L IE+ D + + P+ N+ ID
Sbjct: 360 FSEAYQHYICVITAGKTKEAQQAWSGLVQSRLRRLIQGIEQSDADSVELVQPF-NKGIDR 418
Query: 240 SKPC 243
C
Sbjct: 419 VHEC 422
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 180/342 (52%), Gaps = 34/342 (9%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
M V+ +D +VRSL+ RVA IL+ VPN +R LR ++ WA+RRG+YSN GFLGG
Sbjct: 310 MQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGG 369
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC-PIEEDELGFSV-WDPRK 118
++WA+LV VCQ++P A + LV RFF V WRWP P+++ P + V WDP+
Sbjct: 370 ISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQH 429
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIEL----NKAQWSA 174
N DR+H MPIITP +P +N++ NV++STLRV+ E+F G RI +++ + + W+
Sbjct: 430 NIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQ 489
Query: 175 LFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
LF P Y +++ +++ A + + L W +V SR R+L ++ T + HP P+
Sbjct: 490 LFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSISALHPLPD 548
Query: 235 EYIDPSKPCPNS-----AFFMGL----------RR-------KEGVTGKERQQFDIRGTV 272
S FF+G RR + V K Q+ + +V
Sbjct: 549 LVRAQGHETDESDAVVGYFFIGYTVNVPPTPQPRRGDRRHSARSPVITKNSQEELAKNSV 608
Query: 273 DN-----FREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDG 309
+ E+ KPGM + +++ LPS +FP G
Sbjct: 609 ASATRYFLATELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 160/286 (55%), Gaps = 8/286 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +D+ ++ +NG RV D+IL VP FR+ LR +K WA++R VY + + GGV
Sbjct: 180 NLLRGLDDTDLKCVNGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYPGGV 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+ ++VARVCQLYPNA +V +FF + W WP+P+ L E+ LG + WDP NP
Sbjct: 240 AYGMIVARVCQLYPNAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPG 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYPCMNS++ ++ ST+ V+ ++ G +I EI K W LF + F
Sbjct: 300 DKRHLMPVITPAYPCMNSTHTITPSTMAVLKKESDRGEKIMNEIYEGKRPWKDLFAKHTF 359
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER-DTNGLLQCHPYPNEYIDP 239
F +AY++Y+ + A D W G V+SR ++L IE+ D + + P+ N+ I
Sbjct: 360 FSDAYQHYICIITAARTKDAQQAWSGLVQSRVKRLLAGIEQSDADSVKLVQPF-NKGIAR 418
Query: 240 SKPCPNSA-----FFMGLRRKEGVTGKERQQFDIRGTVDNFREEIG 280
C + A GL + G + Q +++ V E+ G
Sbjct: 419 RHECKSEADIEKTLAGGLECQVGESKTADQSAEVKAQVAAHEEDDG 464
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 149/249 (59%), Gaps = 5/249 (2%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D+IL VP F++ LR +K WA+R+ +Y+N+ G+ GGV
Sbjct: 181 NLLRGLSENAVRSLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE--LGFSVWDPRKN 119
WA+LVARVCQLYP A +++V++FF + +W WP PV+L IE + VW+P+
Sbjct: 241 AWAMLVARVCQLYPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLY 300
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
DR+H MPIITPAYP M +++NV S++ V+ ++ + G + EEI L + W LF +
Sbjct: 301 ASDRNHKMPIITPAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRRPWKDLFTKH 360
Query: 180 LFFEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
FF + +K YL V + W G++ESR R L KIE + L P+ N+ D
Sbjct: 361 TFFTSGFKYYLTVISSSRTKKAQNVWSGFIESRVRLLVNKIEMHPSIAL-ARPF-NKGYD 418
Query: 239 PSKPCPNSA 247
C N A
Sbjct: 419 RMHRCKNDA 427
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 168/318 (52%), Gaps = 14/318 (4%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L+ +D ++RS++ RV+ +L+ VP FR +R ++ WAKRRG+YSN TGFLGG++
Sbjct: 318 ILSGMDSISIRSMSIARVSSLVLELVPKGCAFRSFVRIIRLWAKRRGIYSNKTGFLGGIS 377
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCP--IEEDELGFSVWDPRKNP 120
W LL +CQ+ P A S+L+ RFF V+++W WP PV + + E W P+ N
Sbjct: 378 WTLLAVFICQMLPEASLSVLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCPQTNH 437
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKA--QWSALFEP 178
DR+H MPIITP YP +NS+ NV+ +TLR+M E+FQ G I EEI A W LF P
Sbjct: 438 HDRAHLMPIITPGYPSVNSAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTP 497
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F Y NYL + + A + +DL W ++ SR R+L +E + HPYP
Sbjct: 498 SEFLVRYDNYLVMRVQALNEEDLDQWSNYIASRLRKLVESLEVAI-PIRSVHPYPVLMPG 556
Query: 239 PSKPCPNSA--FFMGLR---RKEGVTGKERQQFDIRGTVDNFR----EEIGMYMFWKPGM 289
P N++ + +G RK G + TV R E+ KPGM
Sbjct: 557 TQDPGVNASGYYLLGFEVENRKRGCKSNTLCEEAKACTVSAMRYFIATEVDQCTERKPGM 616
Query: 290 DIYVSHVRRRQLPSFVFP 307
I + + LP V P
Sbjct: 617 KIDLQYANWNALPLCVLP 634
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 160/272 (58%), Gaps = 16/272 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +DE +RS+NG RV D++L VP + FR R +K WA+RR +Y+N+ GF GG+
Sbjct: 180 SLLRGLDETDLRSVNGTRVTDEVLSLVPQPKIFRQVTRAVKLWAQRRAIYANIVGFPGGI 239
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA++VAR+CQLYP A ++++ RFF + + W WP P+ML IE+ L VW+P+ P
Sbjct: 240 AWAMMVARICQLYPMACAAVVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPG 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MPIITPAYP M +++N++ ST +V+ + ++I +I K +W LF+ + F
Sbjct: 300 DKRHLMPIITPAYPSMCATHNITHSTQKVIKRELLRASQITSDILSEKRRWRDLFDRHTF 359
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
F + +K YL + + D + W VES+ R+L IE+ P E ++ +
Sbjct: 360 FTQDFKYYLSIVAASHDKEAQDNWSSSVESKVRKLVGLIEQS----------PAEDVELA 409
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTV 272
+P F G +R +E ++ ++G+V
Sbjct: 410 QP-----FNKGFKRVHHCKTEEEKEEVLQGSV 436
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 150/245 (61%), Gaps = 8/245 (3%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+ V+ +D +VRSL+ RVA IL+ VPN FR TLR ++ WA+RRG+YSN G+LGG
Sbjct: 329 VQVMRGMDATSVRSLSVARVASLILELVPNASVFRSTLRVIRLWARRRGLYSNKAGYLGG 388
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC-PIEEDELGFSV-WDPRK 118
++WALLV VCQ++P A + LV RFF V WRWP P+++ P ++ V WDP
Sbjct: 389 ISWALLVCFVCQMFPRASVASLVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQWDPAH 448
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIEL----NKAQWSA 174
N DR+H MPIITP +P +N++ NV+LSTLRV+ E+F G RI +++ + + W+
Sbjct: 449 NIHDRAHLMPIITPGFPAVNTAVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQ 508
Query: 175 LFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
LF P Y +++ +++ A + + L W +V SR R+L ++ T + HP P
Sbjct: 509 LFTPTEVLVRYDHHIAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSVATLHPLP- 566
Query: 235 EYIDP 239
E + P
Sbjct: 567 EIVRP 571
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 14/235 (5%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+ GV
Sbjct: 181 LLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGVA 228
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVARVCQLYP A S++V +FFR+ W WP PV+L PIE+ L VW+P+ D
Sbjct: 229 WAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGD 288
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVSLST V+ + + G I E+I L + +WS LF + FF
Sbjct: 289 RFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFF 348
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + + W G VE++ R L + +++ + + HP+P +
Sbjct: 349 SKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKAS-IDVAHPFPKGF 402
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 178/330 (53%), Gaps = 35/330 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL VD T +SLNG RV + ++K PN E F LR ++ WAKRRG+YSN G+LGGVN
Sbjct: 183 VLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVN 242
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
W +LV + QLYP A PS L+ RFF V W+WP + LC + +LG VW+ +
Sbjct: 243 WCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HN 301
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK--AQWSALFEPYL 180
R MPI+TPAYP MNSS+NVS +L VM E+F+ G I +++ L+K ++W LFEP
Sbjct: 302 RYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSE 360
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI--- 237
FF +++YL V++ D+ W + ESR R+L + + L + Y ++
Sbjct: 361 FFAVHQHYLAVEVYTEKQDEEQAWCSFCESRMRKLVESLAYNP-ALCRLRVYTKKFSLSY 419
Query: 238 ---------------DPSKPCPNSA-FFMGL---RRKEGVTGKERQQFDIRGTVDNFREE 278
P++P A F++G RR+ ++ I +V+ F+
Sbjct: 420 VTAGEAPVGGQSNGQPPAQPSKFGACFYVGFDIDRRQ-----LRSREVSIDSSVEYFKNN 474
Query: 279 IGMYMFWK--PGMDIYVSHVRRRQLPSFVF 306
+Y + K P MD+ V+ V + LP VF
Sbjct: 475 -DLYRWNKRTPTMDVRVTPVLWKALPESVF 503
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 166/311 (53%), Gaps = 21/311 (6%)
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDP 239
YK+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NP 178
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSH 295
K + + +GL K+ + +DI+ D +R+ I MF + M I H
Sbjct: 179 DKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 237
Query: 296 VRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRP 355
V+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 238 VKRKQLHQLL---------PNHVLQKKKKHSTESVKLTALNDSSLDLSMDSDNSMSVPSP 288
Query: 356 DKSVKRASISS 366
+ K + ++S
Sbjct: 289 TSATKTSPLNS 299
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 166/311 (53%), Gaps = 21/311 (6%)
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDP 239
YK+Y+ + A L W G VES+ R L +E++ L Q P P E +P
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NP 178
Query: 240 SKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSH 295
K + + +GL K+ + +DI+ D +R+ I MF + M I H
Sbjct: 179 DKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMH 237
Query: 296 VRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRP 355
V+R+QL + P+ ++ E VK+ S L + ++ M P
Sbjct: 238 VKRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSP 288
Query: 356 DKSVKRASISS 366
+ K + ++S
Sbjct: 289 TSATKTSPLNS 299
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 174/329 (52%), Gaps = 31/329 (9%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD T +SLNG RV + ++K PN + F LR ++ WAKRRG+YSN G+LGGVN
Sbjct: 183 ILVGVDAATEKSLNGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVN 242
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
W +LV + QLYP A P+ L+ RFF V W+WP + LC E+ +LG VW+ +
Sbjct: 243 WCILVCFINQLYPTAAPTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVG-NN 301
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKA--QWSALFEPYL 180
R H MPI+TPAYP MNSS+NVS +L VM ++F+ +I +EI LN+ +W LFE
Sbjct: 302 RYHVMPILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEI-LNRGAVEWDPLFESSD 360
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH------PYPN 234
FF ++YL VD+ + +D W + ESR R+L IE + CH +P
Sbjct: 361 FFAVQQHYLAVDVYTTNREDEQAWCSFCESRIRKL---IESLAYIPMLCHLRAFPKRFPL 417
Query: 235 EYI----DPSKPCPNS-------AFFMGLRRKEGVTGKERQ----QFDIRGTVDNFREEI 279
++ D P F G G RQ + I +VD F+
Sbjct: 418 SFVGQDQDEKIETPTDRNNEEKETFKYGACFYVGFDIDRRQLRSREVSIDSSVDYFKHN- 476
Query: 280 GMYMFWK--PGMDIYVSHVRRRQLPSFVF 306
+Y + K MD+ ++ V + LP +VF
Sbjct: 477 DLYRWNKRSDSMDVRITPVLWKNLPDYVF 505
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 134/233 (57%), Gaps = 2/233 (0%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +D+ VR +NG RV ++IL+ VP + FR LR +K WA+RR +Y N+ G+ GGV
Sbjct: 178 NLLRGLDDTDVRCVNGTRVTNRILQLVPQTKTFRYALRAIKLWAQRRAIYGNIVGYPGGV 237
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVARVCQLYP A+ ++V RFF + +W WP PV L E L WDP +
Sbjct: 238 AWAILVARVCQLYPKAVAPLIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRH 297
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D H MPI+TPA P N+++ V ST VM + + G +I +I W ALFE + F
Sbjct: 298 DAGHLMPILTPAVPSTNTAHTVGPSTKMVMMRELERGEQIIADIYSKSKPWKALFERHNF 357
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE-RDTNGLLQCHPY 232
F AYK+Y+ V + D W G V+S+ + L IE D N + P+
Sbjct: 358 FTTAYKHYICVVTASKSKDAQDAWAGLVQSKIKWLVQGIESSDANSIELVQPF 410
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 142/235 (60%), Gaps = 4/235 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E +R +NG RV D++L+ VP + FR+ LR +K WA RRGVY NV GF GGV
Sbjct: 179 NLLRGLSETDLRCVNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIE-EDELGFSVWDPRKNP 120
+A++V R+CQLYP A ++V++FF V +WRWP+PV LC E +LG V +NP
Sbjct: 239 GYAMMVVRMCQLYPRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENP 298
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
+++ MPIITP +PCMN++ ++ S L V+ +FQ +I +I K +W ALF
Sbjct: 299 WEKADKMPIITPVFPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQEWQALFARQT 358
Query: 181 FF-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE--RDTNGLLQCHPY 232
FF E YK+YL + + + W G+V SR R+L IE + + HP+
Sbjct: 359 FFTEDYKHYLCLVTGSRTKEAQQAWSGFVSSRLRKLVSSIESPQSKTAVKLIHPF 413
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 136/219 (62%), Gaps = 20/219 (9%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + +RSLNGCR D+IL+ VPN+++FR+ LR K WAK+ G+YS G+ GGV+
Sbjct: 112 LLKNLDPKLMRSLNGCRATDEILRLVPNIDNFRLALRSTKLWAKKHGIYSTSLGYFGGVS 171
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQL PN +P L + P+ V LGF VWDPR N +
Sbjct: 172 WAMLVARTCQL-PNVVPVFL-----------KRPDTV--------NLGFQVWDPRVNVQG 211
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R MPIITPAYP NS+++VS ST ++M +F G +I +EI L KA W LFE FF
Sbjct: 212 RFDLMPIITPAYPQQNSTFHVSSSTRKIMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFF 271
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
Y+ ++ + + + + DDLL W G VES+ R L +ER
Sbjct: 272 FKYRYFIVLLVTSNNTDDLLEWCGLVESKIRYLIQNLER 310
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 150/253 (59%), Gaps = 13/253 (5%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D IL VP F++ LR +K WA+R+ +Y+N+ G+ GGV
Sbjct: 181 NLLRGLSENEVRSLNGTRVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML------CPIEEDELGFSVWD 115
WA+LVARVCQLYP A +++V++FF + +W WP PV+L CP+ +VW+
Sbjct: 241 AWAMLVARVCQLYPKATSAVIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTR----VAVWN 296
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSAL 175
P+ DR+H MPIITP+YP M +++NV S++ V+ ++ + G ++ E+I K W L
Sbjct: 297 PKIYASDRNHRMPIITPSYPSMCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKRPWKDL 356
Query: 176 FEPYLFFEA-YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
F + FF + ++ YL V + W G+VESR R L K+E + L P+ N
Sbjct: 357 FTKHTFFTSGFRYYLTVISSSRTKKAQNVWSGFVESRVRLLVNKLEMHPSISL-ARPF-N 414
Query: 235 EYIDPSKPCPNSA 247
+ D C N+A
Sbjct: 415 KGYDREHRCKNNA 427
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 144/244 (59%), Gaps = 4/244 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L + E ++ +NG RV D+IL VP FR+ LR +K WA++RG+Y NV G+ GGV
Sbjct: 181 LLRGLSETDLKCVNGTRVTDRILSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED-ELGFSVWDPRKNPR 121
+A++VARVCQLYP A S +V++FF V W+WP+P+ L E+ L WDP+KN R
Sbjct: 241 YAMMVARVCQLYPRAAASTIVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFR 300
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D+ H MP+ITPAYP MN+++ ++ ST V+ + G+ I +I K QW L + F
Sbjct: 301 DKRHLMPVITPAYPVMNATHTITRSTKEVLIRELNRGHEIMADIYSGKKQWRDLLIKHEF 360
Query: 182 F-EAYKNYLQVDIVAADADDLLTWKGWVESRFR-QLTLKIERDTNGLLQCHPYPNEYIDP 239
F AY++Y+ + + DD W G V SR R +L IE + + P+ N+ I+
Sbjct: 361 FTSAYQHYIVIVTASKTKDDQQAWAGLVTSRLRFKLVEGIEDSADKVNLVQPF-NKGIER 419
Query: 240 SKPC 243
C
Sbjct: 420 HHKC 423
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 136/242 (56%), Gaps = 4/242 (1%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L NVD ++V SLN RV D I VPN+ F+ ++ LKFWAK+RGVY+N GFLG ++
Sbjct: 76 LKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKKRGVYNNGLGFLGSISL 135
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRKNP- 120
++ AR+CQLYP A+PS L+ FF Y QW+WP PV L I + +L VW
Sbjct: 136 EIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVANSHDLNLPVWGYGATEM 195
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
DR H MPII+P YP N++ VS STL++M E F +C++I KA W LFEP
Sbjct: 196 SDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQIHEGKAGWCDLFEPVD 255
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-QCHPYPNEYIDP 239
F Y N+LQ+ A D WKG+ + + +ER + L + HP Y P
Sbjct: 256 LFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLERCPDAYLDRAHPIQRSYAKP 315
Query: 240 SK 241
K
Sbjct: 316 RK 317
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 181/364 (49%), Gaps = 39/364 (10%)
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 125 HHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
H MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L KA+WS LF+ FF+
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKAEWSKLFDAPNFFQK 120
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCP 244
YK+Y+ + A L W G VES+ R L +E++ + H P + PS+
Sbjct: 121 YKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPSPSENSE 179
Query: 245 NSAF----FMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHV 296
F +GL K+ + +DI+ D +R+ I MF + + I HV
Sbjct: 180 KEEFRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMF-ETEIKIAAMHV 238
Query: 297 RRRQ----LPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEE 352
+R+Q LPS V P K E VK+ S L + ++ M
Sbjct: 239 KRKQLHQLLPSHVLPKKKKH-------------SVEGVKLVSLNDSSIDLSVDSDNSMSV 285
Query: 353 VRPDKSVKRASIS----SEVPQPVSPGKTTGDSTNDSEVM--------SAGGHLVSEKDT 400
P + + + ++ S+ P +P + +T ++VM ++GG L
Sbjct: 286 PSPTNATRTSPLNSTGLSQGNSPATPVSLSVTNTQATDVMVPQNNSTENSGGSLNESIPE 345
Query: 401 MAAH 404
A H
Sbjct: 346 TATH 349
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 172/341 (50%), Gaps = 39/341 (11%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEH----FRMTLRCLKFWAKRRGVYSNVTGFL 58
VL+ VD T +SLNG RV + I V E F +R ++ WAK RG+YSN G+
Sbjct: 210 VLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYW 269
Query: 59 GGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRK 118
GGVN + VA V QLYPNA P+ + +FF V+ WRWPNPVML + ELG VW+ +
Sbjct: 270 GGVNINMAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ 329
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELN---------- 168
R P+ITPAYP MNS+ +VS TL+++ E+F G+ I +++ +
Sbjct: 330 AANMR-QVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPAD 388
Query: 169 ---KAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNG 225
W LFEP FF AY YL + I D W G+VESR R+L + +
Sbjct: 389 VESGGMWGELFEPSDFFIAYPYYLSLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLP 448
Query: 226 LLQCHPYPNEY----------IDPSKPCPNSAFFMGLR----RKEGVTGKERQQFDIRGT 271
L + +P ++ + ++ + +F+G R R G +Q DI
Sbjct: 449 LSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGFRVDKLRMRG------EQLDIERQ 502
Query: 272 VDNFRE-EIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYK 311
+ NFR+ E+G + PGMDI ++LP+ F Y+
Sbjct: 503 LSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYE 543
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 145/247 (58%), Gaps = 12/247 (4%)
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP DR
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
H MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQ 120
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYID 238
YK+Y+ + A L W G VES+ R L +E++ L Q P P E +
Sbjct: 121 KYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--N 178
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVS 294
P K + + +GL K+ + +DI+ D +R+ I MF + M I
Sbjct: 179 PDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAM 237
Query: 295 HVRRRQL 301
HV+R+QL
Sbjct: 238 HVKRKQL 244
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 166/313 (53%), Gaps = 23/313 (7%)
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRK--NPRD 122
+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR NP D
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 120
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYI 237
+ YK+Y+ + A L W G VES+ R L +E++ L Q P P E
Sbjct: 121 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE-- 178
Query: 238 DPSKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYV 293
+P K + + +GL K+ + +DI+ D +R+ I MF + M I
Sbjct: 179 NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAA 237
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEV 353
HV+R+QL + P+ ++ E VK+ S L + ++ M
Sbjct: 238 MHVKRKQLHQLL---------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVP 288
Query: 354 RPDKSVKRASISS 366
P + K + ++S
Sbjct: 289 SPTSATKTSPLNS 301
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 27 HVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRF 86
VPN + F +RC++ WAK RG+YSN G+LGGVN+ ++VA CQ+YPNA PS L+ RF
Sbjct: 194 QVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRF 253
Query: 87 FRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLS 146
F++ W WPN + L + ELG VW+ R N H MPIITPAYP MNSS NVS
Sbjct: 254 FKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPVMNSSANVSRF 310
Query: 147 TLRVMTEQFQWGNRICEEIELNKAQWSA---LFEPYLFFEAYKNYLQVDIVAADADDLLT 203
TL VMT +F G + I K SA LFEP FF Y +YL VD++A+ D+
Sbjct: 311 TLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRA 370
Query: 204 WKGWVESRFRQLTLKIERDTNG 225
W GWVESR R++T + ++ G
Sbjct: 371 WVGWVESRLRKVTNRFRMESVG 392
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+DE++V SLNG RV D+IL VPN + F LRC+K+WAKRRG+ ++ G+ GGV +A+
Sbjct: 342 NLDEKSVLSLNGNRVTDEILSLVPNKKVFHGALRCIKYWAKRRGLTGHLYGYFGGVAYAI 401
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VAR+CQL+PN ++ ++F +Y +W+WP PVML IE VWDP+ +P D+ H
Sbjct: 402 SVARICQLFPNMCEYTMICKYFELYKEWKWPTPVMLKKIENLNYNLKVWDPKIHPSDKFH 461
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MP+ITP+YP M S++N+ ST++ E+ + G+R+ E +W F FF+ Y
Sbjct: 462 KMPVITPSYPSMCSTHNIINSTMKRYKEELERGHRLLAE----GKEWKEFFRSTDFFQRY 517
Query: 186 KNYLQVDIV 194
K++L V I+
Sbjct: 518 KSFLAVFIL 526
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 174/335 (51%), Gaps = 48/335 (14%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+DE++V SLNG RV D+IL VPN F LRC+K+WAKRR + ++ G+ GGV +A+
Sbjct: 353 NLDEKSVLSLNGNRVTDEILSLVPNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAI 412
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VAR+CQL+PN ++ ++F +Y +W+WP PVML IE VWDP+ +P D+ H
Sbjct: 413 SVARICQLFPNVCEYTIICKYFELYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFH 472
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
MP+ITP+YP M S++N+ ST++ E+ + +++ E A+W+ F FF+ Y
Sbjct: 473 KMPVITPSYPSMCSTHNIMNSTMKRYKEELERAHKLLVE----GAEWNEFFRGTDFFQRY 528
Query: 186 KNYLQVDIVAADA-----DDLLT--------------------WKGWVESRFRQLTLKIE 220
+++L V I+ +A +D + W+G V SR R L+ K+E
Sbjct: 529 RSFLAVFILLKNAGCTTNNDARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLE 588
Query: 221 R--------------DTNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQF 266
D G L HP +I + C S F+ L + ++ F
Sbjct: 589 TVEQLDSAPPFPQTFDMCGFLGLHPLA--FIPKNALC--SLTFIALDMADSKQLLRKKVF 644
Query: 267 DIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
I ++ F+E + + MD+ + ++R+ +
Sbjct: 645 -IDAPIEEFKEMVFDWDKRTEDMDLVMRAMKRKDV 678
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 169/312 (54%), Gaps = 20/312 (6%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L N+DE + +SL+G R + IL+ VPNVE+F+ LRC+K WAKRRGVY N+ G+ GGV+
Sbjct: 269 LRNIDETSWKSLSGVRANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHL 328
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A VCQ P+A ++L+S FF+ ++ W WP PV L E+ L P R+
Sbjct: 329 AILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPVAL---EDGRL------PTGGTRET 379
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
MPI P P N++ ST +T + G+ + ++ W+ +FEP+ + +
Sbjct: 380 RALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSK 439
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPC 243
Y ++++ + +++ D+L W GWV+SRFR L K+E + GL C P P E+IDP
Sbjct: 440 KYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVE-EVQGL--CDPNPTEFIDPDAGE 496
Query: 244 PNSAFFMGLRRKEGVTGKERQQF-DIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLP 302
PN FF G++ R F DI D+F + I + P + +S + QLP
Sbjct: 497 PNVVFFWGVQ-------PGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLP 549
Query: 303 SFVFPDGYKRPR 314
+ D R R
Sbjct: 550 GYAXLDTGSRNR 561
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 169/312 (54%), Gaps = 20/312 (6%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L N+DE + +SL+G R + IL+ VPNVE+F+ LRC+K WAKRRGVY N+ G+ GGV+
Sbjct: 228 LRNIDETSWKSLSGVRANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHL 287
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A VCQ P+A ++L+S FF+ ++ W WP PV L E+ L P R+
Sbjct: 288 AILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPVAL---EDGRL------PTGGTRET 338
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
MPI P P N++ ST +T + G+ + ++ W+ +FEP+ + +
Sbjct: 339 RALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSK 398
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPC 243
Y ++++ + +++ D+L W GWV+SRFR L K+E + GL C P P E+IDP
Sbjct: 399 KYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVE-EVQGL--CDPNPTEFIDPDAGG 455
Query: 244 PNSAFFMGLRRKEGVTGKERQQF-DIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLP 302
PN FF G++ R F DI D+F + I + P + +S + QLP
Sbjct: 456 PNVVFFWGVQ-------PGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLP 508
Query: 303 SFVFPDGYKRPR 314
+ D R R
Sbjct: 509 GYAQLDTGSRNR 520
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 121/195 (62%), Gaps = 2/195 (1%)
Query: 43 FWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC 102
WA+RR +YSN+ GF GGV WA+LVARVCQLYP A S++V +FFR+ +W WP PV+L
Sbjct: 12 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 71
Query: 103 PIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRIC 162
PIE+ L VW+P+ DR H MPIITPAYP M +++NVS+ST V+ + Q G I
Sbjct: 72 PIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIV 131
Query: 163 EEIELNKAQWSALFEPYLFF-EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
++I L + +W LF + FF + YK YL + + + W G VES+ R L ++R
Sbjct: 132 DKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDR 191
Query: 222 DTNGLLQCHPYPNEY 236
+ HP+P +
Sbjct: 192 KAT-IAIAHPFPKGF 205
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 25 LKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVS 84
LK N E T R L WA+RR +YSN+ GF GGV WA+LVARVCQLYP A S++V
Sbjct: 35 LKVQNNFESPAETERSL--WAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVG 92
Query: 85 RFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVS 144
+FFR+ +W WP PV+L PIE+ L VW+P+ DR H MPIITPAYP M +++NVS
Sbjct: 93 KFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVS 152
Query: 145 LSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF-EAYKNYLQVDIVAADADDLLT 203
+ST V+ + Q G I ++I L + +W LF + FF + YK YL + + +
Sbjct: 153 MSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESV 212
Query: 204 WKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
W G VES+ R L ++R + HP+P +
Sbjct: 213 WSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 244
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 175/320 (54%), Gaps = 22/320 (6%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L+NVDE++VRSLNG RV D +L+ VPN + FR+ LR L+ WAK+R VY NV G+LGGVN
Sbjct: 175 ILDNVDEESVRSLNGRRVNDMLLQLVPNQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVN 234
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML-CPIEEDELGFSVWDPRKNPR 121
A+L A +CQ YP P+ ++ FF W WP P+ + P + S WDP + +
Sbjct: 235 LAILAAFICQRYPKKSPAYIIVMFFNDLATWTWPEPIYINTPTTGNR---SNWDPTRQ-Q 290
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D MPIITPAYP +NS ++ + S+ MT +F+ G ++ ++A W + + F
Sbjct: 291 DHKDCMPIITPAYPTINSLHSATKSSRNRMTVEFKRGFKVASACLKSEASWERIIDSPKF 350
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F ++ +++V +VA + + +V+SR R L + IE + + +P E+ P+
Sbjct: 351 FVRHRKFVEVLVVATEEKVYTEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEF--PAN 408
Query: 242 PCPN----SAFFMGLRRKEGVTGKERQQFDI----RGTVDNFREEIGMYMFWKPGMDIYV 293
S F++GL + + D+ + VD+ R++ P D+ +
Sbjct: 409 GYRGNEFCSVFYIGLSYHVPKDENQSRTLDLTSPAKKWVDDIRQKA------PPNADVIL 462
Query: 294 SHVRRRQLPSFVFPDGYKRP 313
V + LPSF+FP+G +RP
Sbjct: 463 DVVDTKDLPSFLFPNG-ERP 481
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 177/328 (53%), Gaps = 25/328 (7%)
Query: 8 DEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
D + + LNG RV ++L+ VPN+E+F++ LR +K WA+RR +YS + GF GGV W ++
Sbjct: 200 DTKDITCLNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMA 259
Query: 68 ARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-------DELGFSVWDPRKNP 120
A+V QLYP PS+L+ +FF +Y W++ + +++ P EE + WDP +
Sbjct: 260 AQVAQLYPKMCPSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRH 319
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
R + +ITP YP NS++NV+ S L V+ + N + + + ++ ++ LFEP +
Sbjct: 320 FSR-RPLTVITPTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAM 378
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH-------PYP 233
FF+ Y ++Q++++ ++ + + G+VES+ R+L K+ GL H P P
Sbjct: 379 FFKQYGTFVQIEVLGSEK-HIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIP 437
Query: 234 NEYI---DPSK-PCPNSAFFMGLRRKEGVTGKER---QQFDIRGTVDNFREEIGMYMFWK 286
E++ DP P N F++GL+ + + + Q D V F +G+++
Sbjct: 438 AEHLGGGDPEDGPWQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEFL--LGIHITDP 495
Query: 287 PGMDIYVSHVRRRQLPSFVFPDGYKRPR 314
I + V+RR LP +V + Y + +
Sbjct: 496 TQTSISIKVVKRRALPEWVKKEYYSQSK 523
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 145/250 (58%), Gaps = 13/250 (5%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L N+DE + +SL+G R +IL+ VPN+E+F+ LRC+K WA+RRGV N+ GFLGGV+
Sbjct: 158 LMNIDETSWKSLSGVRANQRILQFVPNLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHL 217
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A VCQ YPNA S L+S FF Y W WP PVML +D + P ++ +
Sbjct: 218 AILSAVVCQKYPNASVSALISNFFATYATWPWPTPVML----QDGMS----SPAEDFIET 269
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
MPI P P N++ ST + +F G+ + +++ W+ +FEP+ + +
Sbjct: 270 RSFMPIRLPCSPHEYCHSNITKSTYYRIRTEFLRGHSLTKDLLKPDFDWNGIFEPFPYSK 329
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-QCHPYPNEYIDPSKP 242
Y ++++ + A D D++ W GWV+SRFR L LK+E GL QC P P EY D
Sbjct: 330 KYTRFVKIYLSAPDQDEVGDWVGWVKSRFRALLLKLE----GLQGQCDPSPVEYADRDVS 385
Query: 243 CPNSAFFMGL 252
PN F+ GL
Sbjct: 386 EPNVVFYWGL 395
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 185 bits (470), Expect = 5e-44, Method: Composition-based stats.
Identities = 79/130 (60%), Positives = 99/130 (76%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + +RSLNGCRV D+IL VPN+E+FR+TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 38 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVS 97
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV+L E+ L VW PR P D
Sbjct: 98 WAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSD 157
Query: 123 RSHHMPIITP 132
R H MPIITP
Sbjct: 158 RYHLMPIITP 167
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 169/312 (54%), Gaps = 12/312 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL N+ + +VR+LN RV + ++K VPN+++F+ L+ +++WA +RG+Y NV G+ GGV
Sbjct: 183 SVLENLSKLSVRALNSLRVNNMVIKLVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGV 242
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N A+L A VCQ YP A P+ML FF +QW WP P+ + EL WDP
Sbjct: 243 NLAILSAFVCQRYPTASPAMLALYFFSEISQWTWPTPIYINRPNYGEL--LSWDPTTE-S 299
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
D + MPIITPAYP NS + + S+ + ++ +I I WSA+ E + F
Sbjct: 300 DHNDVMPIITPAYPSTNSQRSATTSSRNRIIQEMVKALQIMPNIITGDLPWSAVCEDHEF 359
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHP-YPNEYIDPS 240
FE+YKNY+++DI A D WKG V S+ ++L +E ++C P +P+ + +
Sbjct: 360 FESYKNYIEIDIRAEGLADYNWWKGTVISKVKRLITSLEAIER--VKCAPIFPSSFDREN 417
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSH---VR 297
+ F+GL E E ++ + + + EEI Y + + + +
Sbjct: 418 NNKYQGSIFIGL-ETEKTKDDEGKKVNPSAAIKKYLEEI--YKLTNRPLSTKIENPQVIN 474
Query: 298 RRQLPSFVFPDG 309
R+++P F FP+G
Sbjct: 475 RKKIPDFCFPNG 486
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 158/315 (50%), Gaps = 66/315 (20%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+D + +RSLNGCRV D+IL VPN E+FR+TLR +K WAKRRG+YSN+ GFLGGV
Sbjct: 186 SILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGV 245
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+WA+LVAR CQLYPNA+ + LV +FF V+++W WPNPV+L E+ L VWDPR +
Sbjct: 246 SWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS-- 303
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
ITP + YL
Sbjct: 304 --------ITPVF--------------------------------------------YLL 311
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
+ Y+ + A+ ++ L W G VES+ R L +ER+ L H P + SK
Sbjct: 312 MVLH--YIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPG-SK 367
Query: 242 PCPN-----SAFFMGLRRKEGVTGKERQ---QFDIRGTVDNFREEIGMYMFWKPGMDIYV 293
N S +F+G+ K+ + +DI+ D + K GM I
Sbjct: 368 ENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 427
Query: 294 SHVRRRQLPSFVFPD 308
+HV+++QL ++ P+
Sbjct: 428 THVKKKQLHQYLPPE 442
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 147/265 (55%), Gaps = 26/265 (9%)
Query: 57 FLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML-----CPIEEDELGF 111
FLGGV+WA+LVAR CQLYPNA P+ L+ +FF V+T+W WP+PV+L P D F
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 112 S--VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK 169
VWDPR DR H MPIITPA+P NS++NV+ ST +V+ + + G I EI K
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAITIEILSGK 169
Query: 170 AQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQC 229
A+WS LF+ FF YK+++ + VAA+ +D L W G VES+ R L +ER+ L C
Sbjct: 170 AEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSL-C 228
Query: 230 HPYPNEYIDPSKPCPN---------SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI- 279
H P ++ P P P +F+G+ + + ++ D+ + F + +
Sbjct: 229 HINP-QHFTPISPLPIEISIENPCCQMWFIGMELNKQL----KKNIDLTDEIQQFNDAVM 283
Query: 280 ---GMYMFWKPGMDIYVSHVRRRQL 301
+ PGM + S+VRR L
Sbjct: 284 RAADFQNVYCPGMAVLPSYVRRADL 308
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 113/178 (63%), Gaps = 3/178 (1%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L NVD+Q+V SLNG RV D I VP ++ + +R LK WAK+RGVY NV GFLGG++
Sbjct: 146 LKNVDQQSVTSLNGVRVTDTIRSLVPTMKTLKYCIRALKLWAKKRGVYKNVLGFLGGISL 205
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPI--EEDELGFSVWD-PRKNP 120
++ AR+ QLYP A+PS L+ FF Y+QW+WP PV L + +L VW
Sbjct: 206 EIMAARIGQLYPKALPSRLLYFFFFTYSQWKWPQPVGLTEVIANSHDLNLPVWGFGATEM 265
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
DR H MPIITP YP N++ NVS STL+VM E+F IC++I A+WS LFEP
Sbjct: 266 SDRRHLMPIITPCYPAQNATANVSKSTLKVMQEEFTRAKDICKQILEGNAEWSDLFEP 323
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 134/226 (59%), Gaps = 4/226 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++ E+ + SLNG RV D+IL VPN+E F TLR +K+WA++R VY + G++GGV
Sbjct: 161 LLKHMSEKCILSLNGNRVTDEILAQVPNIETFHKTLRFMKYWAQKRQVYGHAYGYMGGVA 220
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
+AL VA+VCQ+YP+A + +FF V+++W WP PV++ + + VW+P+ N
Sbjct: 221 YALCVAKVCQMYPSADAFKTIEKFFEVFSKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHH 280
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ----WSALFEP 178
++ MP+ITP YP + S++N++ STL VM +FQ G I E NK + L E
Sbjct: 281 KNDKMPVITPVYPPLCSTHNITTSTLFVMKREFQRGTAIFAESLQNKTEPFKVLDELCED 340
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTN 224
FF +K Y + + ++ + + G+ E+R R K+E N
Sbjct: 341 TDFFTRHKTYFMIAMACDNSKEFGRFMGFAETRVRMFAQKLESIEN 386
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 180/344 (52%), Gaps = 53/344 (15%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE++ RS+NG RV+D I VP+ HF LR ++ WA+RRG+YSN G+LGGV
Sbjct: 177 NLLCGMDEKSARSINGVRVSDAIKACVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGV 236
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP-----VMLCPIEEDELGF---SV 113
+WA+LVARVCQL+PN PS LV RFFRVY++W W +P V+ + + GF V
Sbjct: 237 SWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNW-DPSEGAVVLRHSEQRNGEGFQHHKV 295
Query: 114 W--DPRKNPRDR-----SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEE-- 164
W P++ D+ + M +ITPAYP MNS++ V+ T+ + ++ + G I
Sbjct: 296 WCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKG 355
Query: 165 IELNKAQ-WSALFEPYLFFE----AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLK- 218
++L + W L EP FF+ YK +LQ++I A + +G V S+ + L L+
Sbjct: 356 VDLRSRECWETLLEPIHFFDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLLLRK 415
Query: 219 ----IERDTNGLLQCHPY-----PNEYIDPSKPCPN-SAFFMGLRRKEGVTGKERQQFDI 268
DTN PY DP K P SA F+GL G+ D+
Sbjct: 416 MPEVAPEDTNK----APYRAWTGAVALEDPYKEYPYCSALFVGLSIPPGM--------DL 463
Query: 269 RGTVDNFREEIGMYMF-----WKPG--MDIYVSHVRRRQLPSFV 305
R V F E +G+ + +K G D+ V HV LP+ V
Sbjct: 464 RPAVREFMERLGIELATQMPEYKAGGMFDVRVRHVAGPSLPNTV 507
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 153/264 (57%), Gaps = 20/264 (7%)
Query: 8 DEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
D + + LNG RV ++L+ VPN+E+F++ LR +K WA+RR +YSN+ GF GGV W ++
Sbjct: 200 DTKDITCLNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMA 259
Query: 68 ARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-------DELGFSVWDPRKNP 120
A+V QLYP PS+L+ +FF +Y W++ + +++ P EE + WDP ++
Sbjct: 260 AQVAQLYPKMCPSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHH 319
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
R + +ITP YP NS++N++ S L V+ + N + + + ++ ++ LFEP +
Sbjct: 320 FSR-RPLTVITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAM 378
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH-------PYP 233
FF+ Y ++Q++++ ++ + + G+VES+ R+L K+ GL H P P
Sbjct: 379 FFKQYGTFVQIEVLGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIP 437
Query: 234 NEYI---DPSK-PCPNSAFFMGLR 253
E++ DP P N F++GL+
Sbjct: 438 AEHLGGGDPEDGPWQNIFFYLGLK 461
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 140/260 (53%), Gaps = 27/260 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+VL VDE T +SLNG RV + I K V N E F LR + WAKRRG+YSN G+ GG
Sbjct: 143 AVLQGVDEATEKSLNGPRVTNLIYKLVSHNYESFLQVLRVARVWAKRRGIYSNKLGYFGG 202
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
+N+ +LVA +CQL+P A PS L+ +FF ++ +W WP P +LC + GF VW
Sbjct: 203 INFNILVALICQLFPKATPSYLLCKFFAIFAKWDWPAPAILCRPLDHGYGFEVWGQNAEQ 262
Query: 121 RD--------RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ- 171
R++ MPI+TPAYP MNS+ NV+ + V+ ++F G +C+ I A+
Sbjct: 263 LRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEFARGAEVCKRIVARHAEL 322
Query: 172 --------------WSALFEPYLFFEAYKNYLQVDIVA-ADADDLLTWKGWVESRFRQLT 216
W L E FF+ Y YL V+++ + +D +KG++ SR R+L
Sbjct: 323 AENGAVDPDVGGPLWDELVEKTDFFDKYDAYLAVNVLGDGEKEDFDNFKGFLSSRLRKLV 382
Query: 217 LKIERDTNGLLQCHPYPNEY 236
K+ L H +P EY
Sbjct: 383 EKMGHLP--LKMIHLFPKEY 400
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 143/256 (55%), Gaps = 13/256 (5%)
Query: 1 MSVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+S+L N+DE + +SL+G R +IL VPN+ +F+ LRCLK WAKRRGVY N+ GFLGG
Sbjct: 143 LSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSMLRCLKLWAKRRGVYGNLNGFLGG 202
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
V+ A+L A VCQ PNA L+S FF Y W WP PVML +D + +V D +
Sbjct: 203 VHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTPVML----QDGMSSNVEDVIET- 257
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK--AQWSALFEP 178
+MPI P P NV+ ST + +F G+ + ++ K + +FEP
Sbjct: 258 ---RFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTRDLLKLKLDSDVGRIFEP 314
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
+ + Y ++++ + A D D+L W GWV+S FR L LK+E G C P P EY+D
Sbjct: 315 FPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLEA-VQGF--CDPNPMEYVD 371
Query: 239 PSKPCPNSAFFMGLRR 254
PN F+ GL R
Sbjct: 372 MDASEPNVVFYWGLNR 387
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 157/284 (55%), Gaps = 24/284 (8%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
VDE++ RSLNG +V+D K+ + L+ +K WA RG+Y NV G+LGG++W +L
Sbjct: 176 VDEKSSRSLNGLKVSDYFSKYCHQKSYLSF-LKFIKAWAINRGIYGNVMGYLGGISWQIL 234
Query: 67 VARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEEDELGFSVWDPRKNPRDRSH 125
++ QLYPN L+ RFF +++QW+W PV++ +E +W + +
Sbjct: 235 THKIFQLYPNYSVQGLIERFFFIFSQWKWNELPVVIQKCDE------IWRNSLFEQQQKQ 288
Query: 126 H--MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
H M I+TP YP +NS+YNVS T ++ EQ + N I ++I L++ QWS L + FF+
Sbjct: 289 HNVMSILTPVYPYINSAYNVSNCTFTIIEEQLKLANIIMQKICLSELQWSDLLKKIQFFD 348
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKI-ERDTNGLLQCHPYP----NEYID 238
Y YLQ+ ++ + DDL+ WK +ES+ R+L + E D N ++ H YP +Y+
Sbjct: 349 IYYTYLQIRALSKNKDDLIQWKSHIESKLRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQ 408
Query: 239 PSK-PCPNS------AFFMGLRRKEGVTGKERQQFDIRGTVDNF 275
+ P S +FF G+R K+ KE+ DI + F
Sbjct: 409 GDENDTPGSLFNFSESFFYGIRIKDEELVKEK--LDIENIIRQF 450
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 30/299 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ +V+++ ++S+NG RVAD++L V + + FR+ R +K+WA++R +YSN G++GGV+
Sbjct: 198 LIYDVEKRCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVS 257
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA++V RVCQLYPN +V RFF VY +W+W + G S R+ D
Sbjct: 258 WAVMVGRVCQLYPNYSAKQIVERFFFVYARWQW--------TATRDYGNSNVPLRRYTSD 309
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ---------WS 173
R H MP+ITP +P N++YNV S RV+ + + G I E + +NK+ W+
Sbjct: 310 RHHVMPVITPIFPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWA 369
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP 233
L P+ FF+ Y+ +L ++I A L +KG VESR R L +E + P+P
Sbjct: 370 DLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHP 429
Query: 234 NEY---------IDPSKPCPNSAFFMGLR----RKEGVTGKERQQFDIRGTVDNFREEI 279
+ I P AF +G+ + + +I+ D F E I
Sbjct: 430 VMFPRGPLGADAIPGEAPTFLGAFVLGITFDHIATDDLAASAEVSKEIKTACDGFAEHI 488
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 182/317 (57%), Gaps = 26/317 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILK--HVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+L +DE++ +S NG RVA+ + K ++ N E+F+ L+C+K WA+ RG+YSN+ G+L G
Sbjct: 187 MLLGMDERSCKSFNGYRVAEWLSKKENIQNYENFQSILKCIKLWAQNRGIYSNIIGYLSG 246
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEED----ELGFSVWD 115
+ W +LV+++CQL+PN + L+ RFF +Y++WRW + PV + I +D +L W
Sbjct: 247 IGWTILVSKICQLFPNYSLNQLLERFFFLYSRWRWQDFPVQVEYIVDDVANSKLSADQWR 306
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSAL 175
P + M IITP +PCMN ++NVS +TLR++ EQ G +I+ +S L
Sbjct: 307 P-----EYKSSMMIITPCFPCMNCAHNVSSTTLRIIQEQLWHGYETICKIQNGSKNYSDL 361
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER-DTNGLLQCHPYPN 234
F+ + FF+ YK++L++ I+A + +D WKG VES R+LT E LL+ HPYP+
Sbjct: 362 FKSFKFFKKYKHFLEIKILATNKNDYTVWKGHVESGLRKLTRLFESPQYMNLLEVHPYPS 421
Query: 235 ---EYIDPSKPCPNS-----AFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK 286
++D ++ N ++ GL + + + +++ F E++ MY K
Sbjct: 422 YIENFLDDTQSQKNKYKFQCKYYYGLM---CLQSENNESINLKEACVYFVEQLEMYPMNK 478
Query: 287 --PGMDIYVSHVRRRQL 301
M+I SH+ R +L
Sbjct: 479 VLESMNIQCSHLLRSEL 495
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 134/227 (59%), Gaps = 17/227 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ +V+++ ++S+NG RVAD++L V + + FR+ R +K+WA++R +YSN G++GGV+
Sbjct: 198 LIYDVEKRCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVS 257
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA++V RVCQLYPN +V RFF VY +W+W + G S R+ D
Sbjct: 258 WAVMVGRVCQLYPNYSAKQIVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSD 309
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ---------WS 173
R H MP+ITP +P N++YNV S RV+ + + G I E + +NK+ W+
Sbjct: 310 RHHVMPVITPIFPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWA 369
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
L P+ FF+ Y+ +L ++I A L +KG VESR R L +E
Sbjct: 370 DLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 105/151 (69%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D++++ S+NG RV D ++ VPNV+ F LR +K+WAKRRG+Y N G+ GGV +A+
Sbjct: 663 NMDDKSILSINGSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIYGNSFGYPGGVAYAI 722
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
LVAR+CQ YPN ++ +FF +Y+ W+WPNPV+L + +WDP+ + DR H
Sbjct: 723 LVARICQYYPNKDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMH 782
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQ 156
MPIITPAYP + S++NV+ +TL V+ E+ +
Sbjct: 783 KMPIITPAYPSICSTHNVTNTTLGVINEELK 813
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 142 NVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDL 201
N+S L+V E+F +G LF+ FF+ YK YL + + D
Sbjct: 876 NLSFDNLKVFYEKF-YG------------LLKKLFQQSDFFKKYKFYLNIKLTNDDK--- 919
Query: 202 LTWKGWVESRFRQLTLKIER----DTNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEG 257
WKG++ES+ R L K+E +++ P+P ++ FF+GL
Sbjct: 920 --WKGFIESKIRLLCAKLENSEGFSIGYMIKAVPFPQSFV----YNDFVHFFVGLDY--- 970
Query: 258 VTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFV 305
K+R + +I V++F + + G +I + +++++ F+
Sbjct: 971 ---KDRIKINIDKPVNDFLRILNDWDKKDEGSEISIKINKKKEIGEFL 1015
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++ E+ + SLNG RV D+IL VPN+ F TLR +K+WA++R VY + G++GGV
Sbjct: 161 LLKHMSEKCILSLNGNRVTDEILAQVPNISTFHKTLRFIKYWAQKRQVYGHSYGYMGGVA 220
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
+AL VA+VCQLYP A + +FF V+++W WP PV++ + + VW+P+ NP+
Sbjct: 221 YALCVAKVCQLYPGADAFETIEKFFDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQH 280
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK---AQWSALFEPY 179
++ MP+ITP YP + S++N++ STL V ++F G I E K L E
Sbjct: 281 KNDKMPVITPVYPPLCSTHNITNSTLFVAKKEFLRGVAIFSENADKKDPMKILDQLCEDA 340
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
FF +K Y + + + + + G+ E+R R K+E N + + +P +YI
Sbjct: 341 DFFTRHKTYFMIALACDNPKEFSRFMGFAETRVRMFAQKLENIEN-IEYAYTFPKKYI 397
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 161/320 (50%), Gaps = 57/320 (17%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L N+DE ++RSLNG RVA+Q+LK VPN + F +LR +K WAK GVYSN GF GG+
Sbjct: 30 SLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGI 89
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
WA+LVA+ CQLYPNA PS ++ + F V++ W+WP+PV+L
Sbjct: 90 TWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWKWPSPVVL-------------------- 129
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
+ C++S STL ++ E+ + IC++I+ A W+ LFE F
Sbjct: 130 ----------KQFGCVDSKLANLKSTLHIIQEEMKSALEICDQIQKGNATWNDLFEEINF 179
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSK 241
F YK+++ + I + D T G+ ES+ RQL IER++ +I+P K
Sbjct: 180 FSRYKHFVALTI---NED---TNIGFFESKIRQLVQIIERNSQ-------VKTAHINPRK 226
Query: 242 PC---PNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPG----MDIYVS 294
S +F+GL E + D+ ++ F+ + G + + +
Sbjct: 227 LKNIRNESTWFLGLEFTENA-----KNLDLTSEIEGFKRNMARQQ--SKGIVGQIQLDAT 279
Query: 295 HVRRRQLPSFVFPDGYKRPR 314
+V+R L F+ KR R
Sbjct: 280 YVKRSDLIKFISLGDLKRGR 299
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 178/370 (48%), Gaps = 69/370 (18%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V E ++++LN RV+ +L VP +R+ LR ++ WA+RRG+YS G+LGG++
Sbjct: 617 MLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKLGYLGGIS 676
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVA VCQLYPNA P+ + RFF+V ++W+WP PVML I + LGF +WDPR++ D
Sbjct: 677 WAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFD 736
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICE------------------- 163
RSH MPIITPAYP MNSS VS T V+ E+ + E
Sbjct: 737 RSHIMPIITPAYPHMNSSVQVSQPTFSVIYEELWRARYLAEIAVGISKPFPTAAPSPESS 796
Query: 164 EIELNKA-----------------------------------QWSALFEPYLFFEAYKNY 188
E +L A W LF+P FF Y +Y
Sbjct: 797 EADLKAAVVCMATSMPSFDQPLNAVDSTEGVVQTTQGFGEGSAWDKLFQPSNFFIRYSSY 856
Query: 189 LQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY---IDPSKPCPN 245
+ + AA + W +V+SR R+L + + + + H +P + D + P
Sbjct: 857 MVFNFQAASESAMHKWGKFVQSRLRKLVDNLHH-MSPVSRVHAFPRYFPHTCDAERRGPG 915
Query: 246 SAFFMGL----RRKEGVTGKERQQFDIRGTVDN-----FREEIGMYMFWKPGMDIYVSHV 296
S F+G+ RR + + K+ + ++ T++ ++ +P M +
Sbjct: 916 SCMFIGIEFHYRRHQTIQPKDDPE--VKKTLEQAIRFFLATDLQQMEDKQPDMTADAKVL 973
Query: 297 RRRQLPSFVF 306
+LP FVF
Sbjct: 974 SWEELPEFVF 983
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 109/168 (64%), Gaps = 13/168 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
++ N+DE VRS+NG RV + IL V N F++ L+ ++FWAKRR +YSN GFLGGV+
Sbjct: 1055 LMRNMDEHDVRSINGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYSNTLGFLGGVS 1114
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELGFSVWDPRKNPR 121
WA+LV+R+CQLYP A PSMLV FF++++QW WP PV L E L VWDPR N
Sbjct: 1115 WAILVSRICQLYPYASPSMLVYLFFKIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLM 1174
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK 169
D+ H MPI+TP+YP NS+YNV Q NRI E EL +
Sbjct: 1175 DQYHLMPILTPSYPSQNSAYNV------------QRSNRIILERELKQ 1210
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
V WA++VAR+CQLYPNA+ S++V++FFR+ QW WP P++L PIE+ L +W+P+ P
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
D++H MPIITPAYP M +++N++LST ++ + I ++I + WSALF+ +
Sbjct: 61 SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHD 120
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
FF YK+YL + A A+ L W G VES+ R L ++E + + HP+
Sbjct: 121 FFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLEL-VDAIALAHPF 171
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 131/231 (56%), Gaps = 18/231 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEH----FRMTLRCLKFWAKRRGVYSNVTGFL 58
VL+ VD T +SLNG RV + I V + F +R ++ WAK RG+YSN G+
Sbjct: 138 VLSGVDSATEKSLNGPRVTNLIAALVSGTDERYQTFLTVVRLVRKWAKARGLYSNKMGYW 197
Query: 59 GGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRK 118
GGVN + VA V QLYPNA P+ L+ +FF V+ WRWPNPVML + ELG VW+ +
Sbjct: 198 GGVNINIAVALVLQLYPNACPASLLRKFFLVFKSWRWPNPVMLTKPHDAELGLPVWNSFQ 257
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI-------ELNKAQ 171
R P++TPAYP MNS+ +VS TL+++ E+F G+ + +++ L+K +
Sbjct: 258 AANMR-QVAPMVTPAYPAMNSTLSVSRQTLQILHEEFCRGHNVVDKLYKDFQKGALDKDK 316
Query: 172 ------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLT 216
W LFEP FF Y YL + IV D W G+VESR R+L
Sbjct: 317 IESGDIWKELFEPSDFFIGYPYYLSLCIVGPSQADAQAWAGFVESRLRKLV 367
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 118/177 (66%), Gaps = 20/177 (11%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
++E+ VRS++G RV ++IL+ VP+V FR +LR +K WAK+RG+YSNV GFLGGV WA+L
Sbjct: 173 LEEKCVRSVSGPRVTNEILRLVPSVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWAML 232
Query: 67 VARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHH 126
VARVCQ+YPNA + +VSRFF + ++W WP PV+L P+EE + P D++H
Sbjct: 233 VARVCQMYPNACTASIVSRFFHIMSKWEWPQPVLLKPMEEGPI---------YPADKAHR 283
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQ----------WGNRICEE-IELNKAQW 172
MPIITP +P M +++NV+ ST +M +F W +RI + I + + QW
Sbjct: 284 MPIITPGFPSMCATHNVTNSTRSIMMNEFLKISQDAVTVVWISRISNKTIGIKEEQW 340
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 165/336 (49%), Gaps = 53/336 (15%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEH----FRMTLRCLKFWAKRRGVYSNVTGFL 58
VL+ VD T +SLNG RV + I V E F +R ++ WAK RG+YSN G+
Sbjct: 147 VLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYW 206
Query: 59 GGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRK 118
GGVN + VA V QLYPNA P+ + +FF V+ WRWPNPVML + ELG VW+ +
Sbjct: 207 GGVNINMAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ 266
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
R P+ITPAYP MNS+ +VS TL+++ E+F G+ I +++
Sbjct: 267 AANMR-QVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKL------------- 312
Query: 179 YLFFEAYKNYL--------QVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
YK+Y ++ I D W G+VESR R+L + + L +
Sbjct: 313 ------YKDYQRGRDRPGGRLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQ 366
Query: 231 PYPNEY----------IDPSKPCPNSAFFMGLR----RKEGVTGKERQQFDIRGTVDNFR 276
+P ++ + ++ + +F+G R R G +Q DI + NFR
Sbjct: 367 LWPKKFDVCCADKTALLTHAQRANSITYFIGFRVDKLRMRG------EQLDIERQLSNFR 420
Query: 277 E-EIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYK 311
+ E+G + PGMDI ++LP+ F Y+
Sbjct: 421 KFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYE 456
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 168/314 (53%), Gaps = 25/314 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD + R L+G RV QI++ VPN++ F++ LRCLK WA++RG+Y ++ G+ G++
Sbjct: 224 LLEKVDGASWRCLSGVRVNRQIMQLVPNMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIH 283
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VC+ +PNA + L S FF +++ W WP PV L D+ +W P D
Sbjct: 284 LAVLGAYVCRRHPNASVNTLFSMFFDIFSHWPWPLPVAL----HDQA--PLWGP-----D 332
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P +P + +++ ST + E+ + G + ++I W+ +F PY +
Sbjct: 333 GCSLMPIVMPCFPPEFCASSITKSTFNKIKEELRRGFALTKDIRNVDIDWTWIFAPYPYT 392
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
Y+++L + + A ++L W GWV+SRFR L LK+E + C P P+E ++ +
Sbjct: 393 VKYEHFLHMVLSAPTTEELRDWVGWVKSRFRNLILKLESLD---VDCDPDPSEKVNHTIA 449
Query: 243 CPNSAFFMGL-RRKEGVTGKERQQFDIRGTVDNF--REEIGMYMFWKPGMDIYVSHVRRR 299
PN FF GL R ++ + ++ ++N +E+ DI +S +
Sbjct: 450 APNVVFFWGLIYRSTKISASSLKNDFMKSVINNIYGKEKCAR-------SDITMSIIETS 502
Query: 300 QLPSFVFPDG-YKR 312
QLP + D YK+
Sbjct: 503 QLPKSISGDSVYKK 516
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 154/279 (55%), Gaps = 26/279 (9%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D ++ RSL+G RV +QI++ VPN + F++ LR +K WA+RRG++ ++ GF G++
Sbjct: 242 LRRLDSRSWRSLSGVRVNEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHL 301
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A +CQ YPNA + L + FF ++ W W PV L P R
Sbjct: 302 AILAAYICQRYPNATANGLFTMFFEIFAHWDWQIPVNLHG-----------QPTNCKRSD 350
Query: 124 SHHMPIITPAYP---CMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
++MPI+ P P CM+ N++ T + + E+ G + +++ + +W+ LF P+
Sbjct: 351 GYYMPIVMPCTPPELCMS---NMTKCTFKKIREELMRGYALTKDLWRHDFEWTWLFAPFP 407
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
+ Y+ +L++ + + +++L W GWV+SRFRQL LK+ER NG L+C PY +E +D
Sbjct: 408 YATRYQQFLRIALCSPTSEELRDWTGWVKSRFRQLILKLER--NG-LECDPYSSEEVDHR 464
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
PN + GL + DI ++F ++I
Sbjct: 465 VIKPNIMYHWGL------ISEANTYLDISSLREDFMKDI 497
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 158/302 (52%), Gaps = 26/302 (8%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++DE + +SL+G R IL+ VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 146 LRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 205
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A VC PNA S L++ FF + W+WP PV+L ED + P
Sbjct: 206 AILAAFVCGYQPNATLSSLLANFFYTFALWQWPTPVVLL---EDTYPSTGAPP------- 255
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
MPI P + ++ ST + +F G+ + ++ W LFE Y +
Sbjct: 256 -GLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYAN 314
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPC 243
Y + ++ + AA+ +DL W GWV+SRFR L +KIE + G+ C P P EY++
Sbjct: 315 TYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQ 371
Query: 244 PNSAFFMGLR-RKEGVTGKERQQFDIRGTVD--NFREEIGMYMFWKPGMDIYVSHVRRRQ 300
PN F+ GL+ R V+ E + D V+ +FR +G I ++ V+ Q
Sbjct: 372 PNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVG---------RIQLTLVKASQ 422
Query: 301 LP 302
LP
Sbjct: 423 LP 424
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 157/302 (51%), Gaps = 26/302 (8%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++DE + + L+G R IL+ VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 170 LRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 229
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A VC PNA S L++ FF + W+WP PV+L ED + P
Sbjct: 230 AILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLL---EDTYPSTGAPP------- 279
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
MPI P + ++ ST + +F G+ + ++ W LFE Y +
Sbjct: 280 -GLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYAN 338
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPC 243
Y + ++ + AA+ +DL W GWV+SRFR L +KIE + G+ C P P EY++
Sbjct: 339 TYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQ 395
Query: 244 PNSAFFMGLR-RKEGVTGKERQQFDIRGTVD--NFREEIGMYMFWKPGMDIYVSHVRRRQ 300
PN F+ GL+ R V+ E + D V+ +FR +G I ++ V+ Q
Sbjct: 396 PNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVG---------RIQLTLVKASQ 446
Query: 301 LP 302
LP
Sbjct: 447 LP 448
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 157/302 (51%), Gaps = 26/302 (8%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++DE + + L+G R IL+ VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 145 LRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 204
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A VC PNA S L++ FF + W+WP PV+L ED + P
Sbjct: 205 AILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLL---EDTYPSTGAPP------- 254
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
MPI P + ++ ST + +F G+ + ++ W LFE Y +
Sbjct: 255 -GLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYAN 313
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPC 243
Y + ++ + AA+ +DL W GWV+SRFR L +KIE + G+ C P P EY++
Sbjct: 314 TYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQ 370
Query: 244 PNSAFFMGLR-RKEGVTGKERQQFDIRGTVD--NFREEIGMYMFWKPGMDIYVSHVRRRQ 300
PN F+ GL+ R V+ E + D V+ +FR +G I ++ V+ Q
Sbjct: 371 PNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVG---------RIQLTLVKASQ 421
Query: 301 LP 302
LP
Sbjct: 422 LP 423
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 155/300 (51%), Gaps = 22/300 (7%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L ++DE + +SL+G R IL+ VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 172 LRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHM 231
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A VC NA S L++ FF ++ W+WP PV+L ED + P
Sbjct: 232 AILAAFVCGYESNATLSSLLANFFYIFAHWQWPTPVVLL---EDTYPATGAPP------- 281
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
MPI P + N++ ST + +F G+ + ++ W LFE Y +
Sbjct: 282 -GLMPIQLPCGSHQYCNSNITRSTFYKIMAEFLRGHNLTKDYLKPNFSWKNLFELYPYEN 340
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPC 243
Y + ++ + AA+ +DL W GWV+SRFR L KIE + G+ C P P EY++
Sbjct: 341 TYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLSKIE-EVYGI--CDPNPTEYVETYTKQ 397
Query: 244 PNSAFFMGLR-RKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLP 302
PN F+ GL+ R V+ DI F + + F P I +S V+ QLP
Sbjct: 398 PNIVFYWGLQLRTINVS-------DIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLP 450
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 163/336 (48%), Gaps = 38/336 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNV--EHFRMTLRCLKFWAKRRGVYSNVTGFLG 59
S L + D VRSLNG RV +L V V E F+M L +K WA+ +GVYSNV GF G
Sbjct: 316 SDLCDQDPAGVRSLNGARVTQTLLDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGFWG 375
Query: 60 GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDEL-----GFSV- 113
GVNWA+LVA VC+ YP + + V FF + W+WP PV L + + + G +V
Sbjct: 376 GVNWAILVAYVCRAYPESSIADTVQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVL 435
Query: 114 --WDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQW-GNRICEEIELN-- 168
W+P + RD H PI+TPAYP MNSSYNV+L LR MTE Q+ ++I ++ +
Sbjct: 436 PSWNPAIHIRDGLHVCPILTPAYPVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHT 495
Query: 169 ----------KAQWSALFE---PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL 215
K W L+ ++F +++Y+ I A + +TW VESR R L
Sbjct: 496 TYNRGVPVRRKIPWHRLWSLNAGWVF--RHQHYVHATIRAPQGEAFVTWFRLVESRLRVL 553
Query: 216 TLKIERD-----TNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRG 270
+E +G P D + FF+GLR V D+R
Sbjct: 554 ISSLETPDSHAWPHGRFFYRNVPIAPYDELNGLREAHFFIGLRFASHV-----DTADVRT 608
Query: 271 TVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVF 306
+F ++ ++ MD+ + HV LP FV
Sbjct: 609 LTLDFLRQVNGWIGRDSSMDLSLGHVTLPNLPRFVL 644
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 127/235 (54%), Gaps = 35/235 (14%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DE+ +R +NG RV D+IL+ VP + FR+ LR +K WA+RR +YSN+ GF GGV
Sbjct: 181 LLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR PIEE L VW+P+ D
Sbjct: 241 WAMLVAR---------------------------------PIEEGPLQMKVWNPKIYHGD 267
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
R H MPIITPAYP M +++NVSLST V+ + + G I ++I L + W+ LF + FF
Sbjct: 268 RYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFF 327
Query: 183 -EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ YK YL + + + W G VES+ R L ++R ++ + HP+P +
Sbjct: 328 SQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKSS-IEVAHPFPKGF 381
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 130/219 (59%), Gaps = 27/219 (12%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + VRSLNGCR D+IL+ VPN+++FR+ L+ G+YSN G+ GGV+
Sbjct: 345 LLKNLDPKLVRSLNGCRATDEILRPVPNIDNFRLALQ--------HGIYSNSLGYFGGVS 396
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVAR CQL N + + V + F V+++W+ LGF +WDPR N +
Sbjct: 397 WAMLVARTCQLL-NVVAATQVHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQG 445
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ H M IITPAYP NS+++VS ST +VM +F G +I +EI L+KA W L
Sbjct: 446 QFHLMSIITPAYPQQNSTFHVSRSTRKVMLNEFNRGMQITDEIMLDKAGWDKLI------ 499
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
A +Y + + + + DD L W G VES+ R L +ER
Sbjct: 500 -ATLSYSTL-VTSNNTDDHLEWCGLVESKIRYLIQNLER 536
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 141/269 (52%), Gaps = 37/269 (13%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DEQ+V S N RVA I+ VPN FR TLR +K W K R +YSN GF G+
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIG 235
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPI--EEDELGF 111
WA+L A VCQ YPN + +++RFFR Y W PNP + L LG
Sbjct: 236 WAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG-NRICEEIELNKA 170
WDPR++ D P++TPA P N+ YNV+L+ LR + ++FQ G + + +++ ++ A
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAA 354
Query: 171 Q----------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL----- 215
+ WS + EP FF +++YLQ+ + +DA+ + VESR R L
Sbjct: 355 EAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNA 414
Query: 216 -----TLKIERDTNGLLQCHPYPNEYIDP 239
TL+ R L+ H P+ + DP
Sbjct: 415 SSRGHTLEDYRQ----LRLHLNPHRFEDP 439
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 140/269 (52%), Gaps = 37/269 (13%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DEQ+V S N RVA I+ VPN FR TLR +K W K R +YSN GF G+
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIG 235
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPI--EEDELGF 111
WA+L A VCQ YPN + +V+RFFR Y W PNP + L LG
Sbjct: 236 WAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG-NRICEEIELNKA 170
WDPR++ D P++TPA P N+ YNV+L+ LR + ++FQ G + + +++ ++ A
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAA 354
Query: 171 Q----------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL----- 215
+ WS + EP FF +++YLQ+ + +DA+ + VESR R L
Sbjct: 355 EAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNA 414
Query: 216 -----TLKIERDTNGLLQCHPYPNEYIDP 239
TL+ R L+ H P + DP
Sbjct: 415 SSRGHTLEDYRQ----LRLHLNPRRFEDP 439
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 140/269 (52%), Gaps = 37/269 (13%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DEQ+V S N RVA I+ VPN FR TLR +K W K R +YSN GF G+
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIG 235
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPI--EEDELGF 111
WA+L A VCQ YPN + +V+RFFR Y W PNP + L LG
Sbjct: 236 WAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG-NRICEEIELNKA 170
WDPR++ D P++TPA P N+ YNV+L+ LR + ++FQ G + + +++ ++ A
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAA 354
Query: 171 Q----------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL----- 215
+ WS + EP FF +++YLQ+ + +DA+ + VESR R L
Sbjct: 355 EAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNA 414
Query: 216 -----TLKIERDTNGLLQCHPYPNEYIDP 239
TL+ R L+ H P + DP
Sbjct: 415 SSRGHTLEDYRQ----LRLHLNPRRFEDP 439
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 168/340 (49%), Gaps = 34/340 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNV-EHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
+L N+ E VRS+NG RV D+IL+ P E F + LR +K WAKRRG+Y N ++GGV
Sbjct: 169 ILRNLPETCVRSINGRRVTDKILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGV 228
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS---VWDPRK 118
+ A+LVA++CQL+P A S LV +FF Y +W W PV L +E +LG + W P
Sbjct: 229 HLAILVAKICQLFPYATASTLVEKFFWHYKRWDWAIPVELQHVE--DLGITHIPHWSPIN 286
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
N D S M I+TP YP N+SY V+ STL + + + ++I KA W L++
Sbjct: 287 NYHDMS-VMKILTPVYPSQNASYTVTRSTLYRIKRELDRAESVVQKIADGKATWPRLWKQ 345
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY-- 236
FF Y +Y+ V + D ++G VES R L +E + P P +
Sbjct: 346 IPFFGVYSHYICVQALTNSEQDRTLYEGLVESTVRNLVTSLEFHP-AVTYAIPIPKAFRR 404
Query: 237 ---IDPS---------KP---CPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI-- 279
DPS +P C + +F+GL K +Q DI + +F +
Sbjct: 405 SPEKDPSTLEDEDTHERPPEYCWRTLWFIGLV----FDPKATEQLDILTVMSDFERRVRF 460
Query: 280 --GMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSR 317
+ P M V + R ++P+++ + K +P++
Sbjct: 461 KESRMTRYDPSMRYTVDPMARDEIPTWLHAEA-KVAKPAK 499
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
Query: 8 DEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
D + VRSLNG RV + +L+ VP F++ L+ +++WAK + +YS+ G+LGGV+WA+LV
Sbjct: 193 DIRCVRSLNGYRVTEMVLRFVPRYRVFQLALKAIRYWAKCQKIYSHTLGYLGGVSWAILV 252
Query: 68 ARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHM 127
A+VC ++P A + ++++FF V +QWRWP PVML P E + +W + P D M
Sbjct: 253 AKVCTMFPKAGAARILNKFFLVMSQWRWPEPVMLLP-EGYGVSSQLWSITQMPWDI---M 308
Query: 128 PIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKN 187
PIITP YP NSS+NVS STL VM G RI ++I + + W + F P + Y++
Sbjct: 309 PIITPVYPQQNSSFNVSKSTLLVMKNALTEGVRITDDILMERCDWKSFFHPVHIADMYEH 368
Query: 188 YL 189
Y+
Sbjct: 369 YV 370
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 132/259 (50%), Gaps = 23/259 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+Q+V S N RVA I+ VP+ FR LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPIE--EDELGF 111
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L + LG
Sbjct: 233 WAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGR 292
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRIC--------E 163
WDPR++ D P++TPA P N+ YNV+++ LR + ++F G+ IC E
Sbjct: 293 G-WDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVE 351
Query: 164 EIELN---KAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
E ++ WS + EP FF YK YL V + DA+ + VES+ R L
Sbjct: 352 ETKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTA 411
Query: 221 RDTNGLLQCHPYPNEYIDP 239
L+ P+ ++P
Sbjct: 412 ESRAQSLESFPHVRLRLNP 430
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 169/338 (50%), Gaps = 30/338 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+E + R L+G RV QI++ +PN++ F++ LRCLK WA++RG++ ++ GF G++
Sbjct: 203 LLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 262
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +++ + W P
Sbjct: 263 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQP----TPWRPHC---- 312
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + E+ Q G + + W+ LF P+ +
Sbjct: 313 -CSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 371
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK++L++ + A A++L W GWV+SRFR L LK+E + C P P+E D S
Sbjct: 372 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMI 428
Query: 243 CPNSAFFMGLRRKEGV---TGKERQQF------DIRGTVDNFREEIGMYMFWKPGMDIYV 293
PN FF GL + ++ F DI G +I M + W
Sbjct: 429 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWP------- 481
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVK 331
+H+ + V+ + PR N+ + C V+
Sbjct: 482 THLPKCVYAHSVYSQNRQNPRQFMMGNQLMNQDCNAVR 519
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 88/112 (78%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 88/112 (78%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 88/112 (78%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 169/338 (50%), Gaps = 30/338 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+E + R L+G RV QI++ +PN++ F++ LRCLK WA++RG++ ++ GF G++
Sbjct: 230 LLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 289
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +++ + W P
Sbjct: 290 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQP----TPWRPHC---- 339
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + E+ Q G + + W+ LF P+ +
Sbjct: 340 -CSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 398
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK++L++ + A A++L W GWV+SRFR L LK+E + C P P+E D S
Sbjct: 399 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMI 455
Query: 243 CPNSAFFMGLRRKEGV---TGKERQQF------DIRGTVDNFREEIGMYMFWKPGMDIYV 293
PN FF GL + ++ F DI G +I M + W
Sbjct: 456 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWP------- 508
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVK 331
+H+ + V+ + PR N+ + C V+
Sbjct: 509 THLPKCVYAHSVYSQNRQNPRQFMMGNQLMNQDCNAVR 546
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 88/112 (78%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 178 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 237
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
LVAR CQLYPNAI S LV +FF V+++W WPNPV+L EE L VWDPR
Sbjct: 238 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 23/259 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+Q+V S N RVA I+ P+ FR LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPIE--EDELGF 111
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L + LG
Sbjct: 233 WAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGR 292
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRIC--------E 163
WDPR++ D P++TPA P N+ YNV+++ LR + ++F G+ IC E
Sbjct: 293 G-WDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVE 351
Query: 164 EIELN---KAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
E ++ WS + EP FF YK YL V + DA+ + VES+ R L
Sbjct: 352 ETKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTA 411
Query: 221 RDTNGLLQCHPYPNEYIDP 239
L+ P+ ++P
Sbjct: 412 ESRAQSLESFPHVRLRLNP 430
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 133/257 (51%), Gaps = 34/257 (13%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L + +RS++GCR D IL+ VPNV HF+ LR +K WAKRRG+YSN GFLGG +W
Sbjct: 871 LRKFEPAVLRSISGCRDGDAILRSVPNVSHFQTVLRAVKLWAKRRGLYSNAVGFLGGFSW 930
Query: 64 ALLVARVC---QLYPN-----------AIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDEL 109
++LVA VC +LY +I L++ FF VY W W PV + P
Sbjct: 931 SVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWDWQQPVAITPGSA--- 987
Query: 110 GFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELN- 168
R P +S MPI+TP P NS+ NV+ STL M ++F I + + N
Sbjct: 988 -------RYKPGHKSDKMPIVTPTPPFNNSARNVARSTLTEMQQEFFRAFDITQASQWNS 1040
Query: 169 KAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWK-------GWVESRFRQLTLKIER 221
+A + L +P FF+ Y YL V++ + +D++ W GW+ESR L +E+
Sbjct: 1041 EAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKWPTNFSLSLGWLESRLIALIFDLEK 1100
Query: 222 DTNGLLQCHPYPNEYID 238
N P+P +++
Sbjct: 1101 --NPQTYARPFPGTFVN 1115
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 30/338 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+E + R L+G RV QI++ +PN++ F++ LRCLK WA++RG++ ++ GF G++
Sbjct: 203 LLAVVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 262
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L D+ + W P
Sbjct: 263 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLF----DQP--TPWRPHC---- 312
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + E+ Q G + + W+ LF P+ +
Sbjct: 313 -CSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 371
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK++L++ + A A++L W GWV+SRFR L LK+E + C P P+E D S
Sbjct: 372 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMI 428
Query: 243 CPNSAFFMGLRRKEGV---TGKERQQF------DIRGTVDNFREEIGMYMFWKPGMDIYV 293
PN FF GL + ++ F DI G +I M + W
Sbjct: 429 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWP------- 481
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVK 331
+H+ + V+ + PR N+ + C V+
Sbjct: 482 THLPKCVYAHSVYSQNRQNPRQFMMGNQLMNQDCNAVR 519
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 169/338 (50%), Gaps = 30/338 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+E + R L+G RV QI++ +PN++ F++ LRCLK WA++RG++ ++ GF G++
Sbjct: 115 LLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 174
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +++ + W P
Sbjct: 175 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQP----TPWRPHC---- 224
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + E+ Q G + + W+ LF P+ +
Sbjct: 225 -CSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 283
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK++L++ + A A++L W GWV+SRFR L LK+E + C P P+E D S
Sbjct: 284 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMI 340
Query: 243 CPNSAFFMGLRRKEGV---TGKERQQF------DIRGTVDNFREEIGMYMFWKPGMDIYV 293
PN FF GL + ++ F DI G +I M + W
Sbjct: 341 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWP------- 393
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVK 331
+H+ + V+ + PR N+ + C V+
Sbjct: 394 THLPKCVYAHSVYSQNRQNPRQFMMGNQLMNQDCNAVR 431
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 169/338 (50%), Gaps = 30/338 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+E + R L+G RV QI++ +PN++ F++ LRCLK WA++RG++ ++ GF G++
Sbjct: 115 LLAVVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 174
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +++ + W P
Sbjct: 175 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQP----TPWRPHC---- 224
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + +++ ST + E+ Q G + + W+ LF P+ +
Sbjct: 225 -CSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYT 283
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
YK++L++ + A A++L W GWV+SRFR L LK+E + C P P+E D S
Sbjct: 284 VRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMI 340
Query: 243 CPNSAFFMGLRRKEGV---TGKERQQF------DIRGTVDNFREEIGMYMFWKPGMDIYV 293
PN FF GL + ++ F DI G +I M + W
Sbjct: 341 EPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWP------- 393
Query: 294 SHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVK 331
+H+ + V+ + PR N+ + C V+
Sbjct: 394 THLPKCVYAHSVYSQNRQNPRQFMMGNQLMNQDCNAVR 431
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 133/260 (51%), Gaps = 21/260 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+Q+V S N RVA I+ VP+ FR LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPIEEDELGFS- 112
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVCQCHPNQNAAGMVVRFFRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGR 292
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEE---IELNK 169
WDPR++ D P++TPA P N+ +NV+++ LR + +F G+ IC + +N+
Sbjct: 293 CWDPRESKSDALALFPVLTPAVPYGNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNE 352
Query: 170 AQ--------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
+ WS + EP FF YK Y+ V + +DA+ + VES+ R L
Sbjct: 353 TKEKFGPHGLWSKILEPVKFFGEYKYYMHVQVTCSDAELYQGYVEAVESKIRFLWAGTAE 412
Query: 222 DTNGLLQCHPYPNEYIDPSK 241
++ P+ +++P +
Sbjct: 413 SRAQSIESFPHIQLHLNPRR 432
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 89/116 (76%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+DE+ VRSL G RVA++IL+ VPNV+ FR +LRC+K WA+RR +YSNV GF GGV
Sbjct: 170 NLLRNIDERCVRSLGGSRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGV 229
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
WA++VAR+CQLYPNAI +VSRFF + QW WP PV+L IEE L VW+P+
Sbjct: 230 AWAMVVARICQLYPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPK 285
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 29/286 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEH---------FRMTLRCLKFWAKRRGVYSN 53
+L +D ++ RSL+G RV +QI++ VPN E F+ LRC+K WA++RG++ +
Sbjct: 230 LLQKIDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCH 289
Query: 54 VTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSV 113
GF G++ A+L A VC+ +P+A S L + FF+ + W W PV L DEL +
Sbjct: 290 YLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSL----HDELTTCL 345
Query: 114 WDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWS 173
MPI+ P P + V+ +L+ + E+ G + + + QWS
Sbjct: 346 -------HSEGRLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWS 398
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP 233
LFEP+ + + Y+ +L++ + A +L W GWV+SRFR L LK+ER ++C P P
Sbjct: 399 WLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCP 455
Query: 234 NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
+E +D + PN F+ GL K + Q D +F E++
Sbjct: 456 SEEVDHTDNDPNVVFYWGLIPKRII------QVDTSSLKGDFMEDL 495
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 123/235 (52%), Gaps = 23/235 (9%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+Q+V S N RVA I+ VP+ FR LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPIE--EDELGF 111
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L + LG
Sbjct: 233 WAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR 292
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ 171
WDPR++ D P++TPA P N+ +NV+L+ LR + +F G+ IC + A+
Sbjct: 293 G-WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCAEFARGHEICSSSLVASAE 351
Query: 172 -----------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL 215
WS L EP FF YK YL V + DA+ + VES+ R L
Sbjct: 352 EAKSRFGPHGIWSRLLEPVKFFGNYKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 123/235 (52%), Gaps = 23/235 (9%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+Q+V S N RVA I+ VP+ FR LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPIE--EDELGF 111
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L + LG
Sbjct: 233 WAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR 292
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ 171
WDPR++ D P++TPA P N+ +NV+L+ LR + +F G+ IC + A+
Sbjct: 293 G-WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAE 351
Query: 172 -----------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL 215
WS L EP FF +K YL V + DA+ + VESR R L
Sbjct: 352 EAKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFL 406
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 29/286 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEH---------FRMTLRCLKFWAKRRGVYSN 53
+L +D ++ RSL+G RV +QI++ VPN E F+ LRC+K WA++RG++ +
Sbjct: 115 LLQKIDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCH 174
Query: 54 VTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSV 113
GF G++ A+L A VC+ +P+A S L + FF+ + W W PV L DEL +
Sbjct: 175 YLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSL----HDELTTCL 230
Query: 114 WDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWS 173
MPI+ P P + V+ +L+ + E+ G + + + QWS
Sbjct: 231 -------HSEGRLMPIVMPCTPLEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWS 283
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP 233
LFEP+ + + Y+ +L++ + A +L W GWV+SRFR L LK+ER ++C P P
Sbjct: 284 WLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCP 340
Query: 234 NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
+E +D + PN F+ GL K + Q D +F E++
Sbjct: 341 SEEVDHTDNDPNVVFYWGLIPKRII------QVDTSSLKGDFMEDL 380
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 160/309 (51%), Gaps = 26/309 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL NVD + R L+G R QI++ VPN++ F+ LRCLK WA++RG++ ++ GF G++
Sbjct: 221 VLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIH 280
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLC--PIEEDELGFSVWDPRKNP 120
A+L A VC+ +PNA + L+S FF ++ W WP PV L P+ P + P
Sbjct: 281 LAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPVSLLDPPV-----------PCRGP 329
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
D MPI+ P P S + + ST + E+ G + ++ WS LF P+
Sbjct: 330 -DGCSLMPIMLPCIPPEFCSSSTTESTFSKIKEELWRGYALSKDTRSTDFNWSWLFAPFP 388
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
+ YK +L++ + A ++L W GWV+SRFR L LK+E + C P P+E +D +
Sbjct: 389 YGARYKCFLRIVLSAPMGEELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSEQVDHT 445
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK---PGMDIYVSHVR 297
PN FF GL + + Q I ++F + + ++ K DI +S V
Sbjct: 446 ITDPNVVFFWGLIYRRNI------QICISSLKEDFMKSVCNNIYGKEKCAHSDITMSIVG 499
Query: 298 RRQLPSFVF 306
QLP VF
Sbjct: 500 PPQLPKSVF 508
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 136/269 (50%), Gaps = 37/269 (13%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +DEQ+V S N RVA I+ VPN FR LR +K W K R +YSN GF G+
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQALRFVKAWGKARSIYSNTFGFPSGIG 235
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPI--EEDELGF 111
WA+L A VCQ YPN + +++RFFR Y W PNP + L LG
Sbjct: 236 WAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG-NRICEEIELNKA 170
WDPR++ D P++TPA P N+ YNV+L+ LR + ++FQ G + + ++ ++
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSNDLGMSAV 354
Query: 171 Q----------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL----- 215
+ WS + EP FF +++YL + + +DA+ + VESR R L
Sbjct: 355 EAEAKFGPFGVWSRVLEPAPFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRILWAGNA 414
Query: 216 -----TLKIERDTNGLLQCHPYPNEYIDP 239
TL+ R L+ H P + DP
Sbjct: 415 SSRGHTLEDYRQ----LRLHLNPRRFEDP 439
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 123/235 (52%), Gaps = 23/235 (9%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+Q+V S N RVA I+ VP+ FR LR +K W K RG+YSN GF G+
Sbjct: 173 LLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPIE--EDELGF 111
WA+LVA VCQ +PN + +V RFFR+Y W PNP + L + LG
Sbjct: 233 WAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR 292
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ 171
WDPR++ D P++TPA P N+ +NV+L+ LR + +F G+ IC + A+
Sbjct: 293 G-WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAE 351
Query: 172 -----------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL 215
WS L EP FF +K YL V + DA+ + VES+ R L
Sbjct: 352 EAKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 29/286 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEH---------FRMTLRCLKFWAKRRGVYSN 53
+L +D ++ RSL+G RV +QI++ VPN E F+ LRC+K WA++RG++ +
Sbjct: 115 LLQKIDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCH 174
Query: 54 VTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSV 113
GF G++ A+L A VC+ +P+A S L + FF+ + W W PV L DEL +
Sbjct: 175 YLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSL----HDELTTCL 230
Query: 114 WDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWS 173
MPI+ P P + V+ +L+ + E+ G + + + QWS
Sbjct: 231 -------HSEGRLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWS 283
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP 233
LFEP+ + + Y+ +L++ + A +L W GWV+SRFR L LK+ER ++C P P
Sbjct: 284 WLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCP 340
Query: 234 NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
+E +D + PN F+ GL K + Q D +F E++
Sbjct: 341 SEEVDHTDNDPNVVFYWGLIPKRII------QVDTSSLKGDFMEDL 380
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 172/346 (49%), Gaps = 38/346 (10%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V+E + R L+G RV QI++ +PN++ F++ LRCLK WA++RG++ ++ GF G++
Sbjct: 226 LLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIH 285
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VC ++P+A S L + FF +++ W WP PV L +++ + W P
Sbjct: 286 LAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQP----TPWRPHC---- 335
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRI-------CEEIELN-KAQWSA 174
MPI+ P P + +++ ST + E+ Q G + E+ + N W+
Sbjct: 336 -CSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKLGVCTVEQGDRNGDINWTE 394
Query: 175 LFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
LF P+ + YK++L++ + A A++L W GWV+SRFR L LK+E + C P P+
Sbjct: 395 LFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPS 451
Query: 235 EYIDPSKPCPNSAFFMGLRRKEGV---TGKERQQF------DIRGTVDNFREEIGMYMFW 285
E D S PN FF GL + ++ F DI G +I M + W
Sbjct: 452 EQADHSMIEPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVW 511
Query: 286 KPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVK 331
+H+ + V+ + PR N+ + C V+
Sbjct: 512 P-------THLPKCVYAHSVYSQNRQNPRQFMMGNQLMNQDCNAVR 550
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 185/384 (48%), Gaps = 57/384 (14%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V +V+SLN RV+ IL VPN + FR R ++ WA+RRG+YS+ G+L G+N
Sbjct: 420 ILAGVSAASVKSLNAPRVSSMILSLVPNRQVFRRVSRAIRAWARRRGIYSSKLGYLSGIN 479
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WALL A VCQL+P S + FF V ++W+WP P+ML + +LG W + RD
Sbjct: 480 WALLTAFVCQLFPGRTVSYVFVHFFYVLSEWQWPKPIMLNIPYDAKLGLECWSFQL--RD 537
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKA------------ 170
R+H MPIITPAYP MNSS V+ STL V+ E+ W R E E+ +
Sbjct: 538 RTHVMPIITPAYPQMNSSAQVTASTLSVIKEEL-WRARDLLEREILSSITSHQQDQRTRK 596
Query: 171 --------------QWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLT 216
W L++P FF Y Y+ + I D+ +L W+ +V SR +L
Sbjct: 597 EAGALEKPDTDTFLSWDVLYQPSSFFVRYDWYVGLTI-QIDSSELGRWETFVCSRLHKL- 654
Query: 217 LKIERDTNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFR 276
+K+ +D + H YP ++ + S+ F+GL+R+ ++ ++F + +
Sbjct: 655 VKMLQDLPMIDLVHGYPQFLVNKA----GSSLFLGLKRR----SEDDEEF-----LSSVN 701
Query: 277 EEIGMYMFWKPGMDIYVSH--VRRRQ----------LPSFVFPDGYKRPRPSRHFNEQAG 324
I ++ + S +R Q LP FVF +G +R ++Q
Sbjct: 702 RTISFFIATDLQQNAQSSESPAKRMQTTAVLLNWDDLPDFVFENGNADALQNREHDDQHL 761
Query: 325 KPCEDVKMCQSGSSGRHLKREKEH 348
K M S S+ +H R H
Sbjct: 762 KQLSLTCM-GSTSNAQHKSRRHSH 784
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/74 (95%), Positives = 73/74 (98%)
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
N ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE+ELGFSVWDPRKNPR
Sbjct: 1 NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPR 60
Query: 122 DRSHHMPIITPAYP 135
DR+HHMPIITPAYP
Sbjct: 61 DRTHHMPIITPAYP 74
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 157/314 (50%), Gaps = 23/314 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D ++ RSL+G RV +QI++ VPN + F++ LRC+K WAKRRG++ ++ GF G++
Sbjct: 142 LLQKLDSRSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIH 201
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VCQ YP + L + FF ++ W W PV L P R
Sbjct: 202 LAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRP 250
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + N++ T + + E+ G + +E + +W LF P+ +
Sbjct: 251 DGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYA 310
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
Y+ +L++ + A +++L W GWV+SRFR L LK+E ++C P E +D
Sbjct: 311 TKYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLESIG---VECDPDSTEEVD---- 363
Query: 243 CPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK---PGMDIYVSHVRRR 299
++ F + G+ K DI ++F +++ ++ K + +S VR
Sbjct: 364 --HTVFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSS 421
Query: 300 QLPSFVFPDGYKRP 313
QLP ++ P
Sbjct: 422 QLPKSLYSHSVYTP 435
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 139/258 (53%), Gaps = 17/258 (6%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL NVD + R L+G R QI++ VPN++ F+ LRCLK WA++RG+ ++ GF G++
Sbjct: 221 VLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIH 280
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRK--NP 120
A+L A VC+ +PNA + L+S FF ++ W WP PV S+ DP
Sbjct: 281 LAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPV------------SLLDPPVLCGG 328
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
D MPI+ P P S + + ST + E+ + G + ++ + WS LF P+
Sbjct: 329 PDGCSLMPIMLPCIPPEFCSSSTTESTFSKIKEELRRGYALSKDTRSTDSDWSWLFAPFP 388
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
+ YK +L++ + A D+L W GWV+SRFR L LK+E + C P P++ +D +
Sbjct: 389 YGARYKCFLRIVLSAPMEDELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSKQVDHT 445
Query: 241 KPCPNSAFFMGLRRKEGV 258
PN FF GL + +
Sbjct: 446 ITDPNVVFFWGLIYRRSI 463
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 127/211 (60%), Gaps = 23/211 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L +DE++ RS+NG RV+D I VP+ HF LR ++ WA+RRG+YSN G+LGGV
Sbjct: 65 NLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGV 124
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP-----VMLCPIEEDELGF---SV 113
+WA+LVARVCQL+PN PS LV RFFRVY++W W +P V+ + + GF V
Sbjct: 125 SWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNW-DPSEGAVVLRHSEQRNGEGFQHHKV 183
Query: 114 W--DPRKNPRDR-----SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEE-- 164
W P++ D+ + M +ITPAYP MNS++ V+ ++ + ++ + G I
Sbjct: 184 WCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKG 243
Query: 165 IELNKAQ-WSALFEPYLFFE----AYKNYLQ 190
++L + W L EP FF+ YK +LQ
Sbjct: 244 VDLRSRECWETLLEPIHFFDYDQGGYKQFLQ 274
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 127/228 (55%), Gaps = 12/228 (5%)
Query: 45 AKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPI 104
A +RG+Y NVTG+LGGVN ALL LYPNA S+++ FR++ +W W PV++ +
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 105 EED-ELGFS--VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRI 161
+ + ELG VW+P++N R ++ PI+TP YP NS+YNV ST VM +F+ +
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 162 CEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
I + W+ LF+ + FF +YK Y+Q+++ A ++ W G+VES+ R+ T IE
Sbjct: 229 TLSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMIEG 288
Query: 222 DTNGLLQCHPYP--------NEYIDPSKPCPNSAFFMGLRRKEGVTGK 261
+ + ++ +P + Y+ P P F++ E GK
Sbjct: 289 NKSIVIHVYPTSFDVVRERGSSYVQPDSPLCKQ-FYIAFTPLEAAKGK 335
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 139/253 (54%), Gaps = 22/253 (8%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D ++ +SL+G RV +QI++ VPN E F++ LRC+K WA+RRG++ ++ G G++
Sbjct: 227 LRRLDSRSWKSLSGVRVNEQIVQLVPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHL 286
Query: 64 ALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
A+L A VCQ +PNA + L + FF ++ W W PV D P +
Sbjct: 287 AILAAYVCQRFPNATANGLFTMFFGIFAHWPWHIPV---------------DLHGQPTNC 331
Query: 124 SHH----MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
H MPI+ P P + N++ T R + E+ G + +++ + +W+ +FEP+
Sbjct: 332 RHSDGCLMPIVMPCTPPELCASNMTEGTFRKIREELMRGYVLTKDLGSHDFEWAWIFEPF 391
Query: 180 LFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDP 239
+ Y +L++ + A +++L W GWV+SRF L LK+E N ++C P ++ +D
Sbjct: 392 PYSTTYGQFLRIALCAPTSEELHDWIGWVKSRFPYLILKLE---NIGIECDPNSSQEVDH 448
Query: 240 SKPCPNSAFFMGL 252
+ PN+ + GL
Sbjct: 449 TVIKPNTVYHWGL 461
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 73 LYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITP 132
LYPNAI +VSRFF + QW WP PV+L IEE L VW+P+ P DR+H MPIITP
Sbjct: 156 LYPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITP 215
Query: 133 AYPCMNSSYNVSLSTLRVMTEQFQ----------------WGNRICEEIELNKAQWSALF 176
AYP M +++NV+ ST +MTE+F+ G+ I + + + A WS LF
Sbjct: 216 AYPSMCATHNVTASTQMIMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSADWSELF 275
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
+ FF Y+ YLQV ++ + W G VESR RQL +K+E + L HP+
Sbjct: 276 SKHDFFHKYRYYLQVIASTGSSELQIKWAGTVESRIRQLVMKLEY-VDSLTLAHPF 330
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 119/234 (50%), Gaps = 21/234 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D+Q+V S N RVA I+ VP+ FR LR +K W K RG+YSN GF G+
Sbjct: 173 LLRGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIG 232
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPIEEDELGFS- 112
WA+LVA V Q +PN + +V RFFR+Y W PNP + L +
Sbjct: 233 WAILVAFVSQCHPNQNAAGMVVRFFRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLGR 292
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEE---IELNK 169
WDPR++ D P++TPA P N+ YNV+++ LR + +F G+ IC + +N
Sbjct: 293 CWDPRESKSDALALFPVLTPAVPYGNACYNVTITNLRQLCSEFARGHEICSSCIGMSVND 352
Query: 170 AQ--------WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL 215
+ W+ + EP F Y+ YL + I D + + VES+ R L
Sbjct: 353 TRTKFGKYGLWNKILEPVKVFGEYRYYLHIQITCTDPEAYQGYVDAVESKIRFL 406
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 155/314 (49%), Gaps = 24/314 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D + RSL+G RV +QI++ VPN + F++ LRC+K WAKRRG++ ++ GF G++
Sbjct: 142 LLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIH 201
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VCQ YP + L + FF ++ W W PV L P R
Sbjct: 202 LAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRP 250
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + N++ T + + E+ G + +E + +W LF P+ +
Sbjct: 251 DGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYA 310
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
Y+ +L++ + A +++L W GWV+SRF L LK+E ++C P E +D
Sbjct: 311 TKYEEFLRIALCAPTSEELRDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVD---- 362
Query: 243 CPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK---PGMDIYVSHVRRR 299
++ F + G+ K DI ++F +++ ++ K + +S VR
Sbjct: 363 --HTVFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSS 420
Query: 300 QLPSFVFPDGYKRP 313
QLP ++ P
Sbjct: 421 QLPKSLYSHSVYTP 434
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 114/165 (69%), Gaps = 1/165 (0%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L V E ++++LN RV+ +L VP +R+ LR ++ WA+RRG+YS G+LGG++
Sbjct: 574 MLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKLGYLGGIS 633
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVA VCQLYPNA P+ + RFF+V ++W+WP PVML I + LGF +WDPR++ D
Sbjct: 634 WAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFD 693
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIEL 167
RSH MPIITPAYP MNSS VS S+ V+ E+ W R EI +
Sbjct: 694 RSHIMPIITPAYPHMNSSVQVSQSSFSVIYEEL-WRARYLAEIAV 737
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 155/314 (49%), Gaps = 24/314 (7%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D + RSL+G RV +QI++ VPN + F++ LRC+K WAKRRG++ ++ GF G++
Sbjct: 160 LLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIH 219
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VCQ YP + L + FF ++ W W PV L P R
Sbjct: 220 LAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPVSLHG-----------QPTNCRRP 268
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + N++ T + + E+ G + +E + +W LF P+ +
Sbjct: 269 DGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYA 328
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
Y+ +L++ + A +++L W GWV+SRF L LK+E ++C P E +D
Sbjct: 329 TKYEEFLRIALCAPTSEELRDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVD---- 380
Query: 243 CPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK---PGMDIYVSHVRRR 299
++ F + G+ K DI ++F +++ ++ K + +S VR
Sbjct: 381 --HTVFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSS 438
Query: 300 QLPSFVFPDGYKRP 313
QLP ++ P
Sbjct: 439 QLPKSLYSHSVYTP 452
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 114/238 (47%), Gaps = 68/238 (28%)
Query: 2 SVLNNVDE-QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
SVL +D+ T RSLNG RVAD+IL+ VP FR LRC+K WAK RGVYSNV GFLGG
Sbjct: 32 SVLRGLDDLATARSLNGIRVADEILRLVPETAVFRTMLRCVKHWAKARGVYSNVAGFLGG 91
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRK 118
+ WA+LVAR+CQLYPN P+ P VML IE D ELG
Sbjct: 92 IGWAILVARMCQLYPNTSPACCSRASSAALRGGSGPARVMLRAIEHDDGELGL------- 144
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
R H LRV TEQ G+ +C+E
Sbjct: 145 ----RRH----------------------LRVTTEQLAVGDDVCQE-------------- 164
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
IV A A W GWVESR RQL+ ++E DT+G+L CH +P Y
Sbjct: 165 --------------IVKAGA----MWVGWVESRLRQLSARVEADTSGVLLCHLHPQAY 204
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 121 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 180
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRW-PNPVML 101
LVAR CQLYPNAI S LV +FF V+++W+W P PV+L
Sbjct: 181 LVARTCQLYPNAIASTLVHKFFLVFSKWQWHPTPVLL 217
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 85/119 (71%), Gaps = 4/119 (3%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D+++VR +NG RVAD ILK VP FR LR +K WAKRRG+Y+N+ GF GG+
Sbjct: 187 LLKNLDDRSVRCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGIT 246
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELG---FSVWDPR 117
WA+LVARVCQ++PN LV RFF + ++W W NPV LCPI + E+G F VW+P+
Sbjct: 247 WAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Query: 49 GVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE 108
G+YSN G+ GGV+W +LVAR CQL PN I + V +FF V+ +W+WP PV L +
Sbjct: 194 GIYSNSLGYFGGVSWGMLVARTCQL-PNVIAATQVHKFFLVFLRWKWPQPVFLKRPDTVN 252
Query: 109 LGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELN 168
LGF VWD R N +DR H M IITPAYP NS+++VS ST +VM +F +I +EI L
Sbjct: 253 LGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLG 312
Query: 169 KAQWSALFE 177
KA W LFE
Sbjct: 313 KAGWDKLFE 321
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEH----FRMTLRCLKFWAKRRGVYSNVTGF 57
+VL+ D T +SLNG RV + I V F +RC++ WAK RG+YSN G+
Sbjct: 145 AVLDGADGATEKSLNGPRVTNLIAALVSGTPQRYQVFLTVVRCVRKWAKARGLYSNKMGY 204
Query: 58 LGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
GGVN + VA V QLYPNA + L+ +FF V+ WRWP P++L + G VW
Sbjct: 205 WGGVNINIGVALVVQLYPNACGASLLRKFFLVFKTWRWPQPLLLTKPHDAGYGLPVWSVA 264
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI----ELNKAQ-- 171
R + P+ITPAYP MNS+ VS TL+++ E+F G+ + +++ + N AQ
Sbjct: 265 TAVRQVA---PMITPAYPAMNSTLAVSRQTLQILQEEFNRGHTVVDQLWKDYQKNPAQEL 321
Query: 172 -WSALFEPYLFFEAY 185
W+ LFEP FF Y
Sbjct: 322 NWNTLFEPSDFFINY 336
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 121/208 (58%), Gaps = 10/208 (4%)
Query: 8 DEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
+++++ +LNG + I K +P+ F LR +K WAK+R V SN+ G+LGG++WA+L+
Sbjct: 206 EDKSMYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILM 265
Query: 68 ARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHM 127
A++CQL+P VS FF++Y+QW W PV++ E++ + + + D K M
Sbjct: 266 AKICQLFPRVDLCQTVSLFFQIYSQWNWKVPVVIDESEQEIICYYLQDEDKR---NDKIM 322
Query: 128 PIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKN 187
IITPAYP N+++ V T + + ++FQ G + W+ + P+ FF+ ++
Sbjct: 323 QIITPAYPFFNTTFKVHKITFQTIFQEFQIGAQ-------KLGDWNEVLRPFDFFDCFQY 375
Query: 188 YLQVDIVAADADDLLTWKGWVESRFRQL 215
++ + IV+ +++ W G+ E++ +L
Sbjct: 376 FVALSIVSKTSENFHKWTGFCEAQLPKL 403
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 120/212 (56%), Gaps = 11/212 (5%)
Query: 8 DEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
+++++ +LNG + I K +P+ F LR +K WAK+R V SN+ G+LGG++WA+L+
Sbjct: 182 EDKSLYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILM 241
Query: 68 ARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHH- 126
A++CQL+P VS FF++Y+QW W PV++ E+D + + RD
Sbjct: 242 AKICQLFPRVDVCQTVSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTLCWKRDEDKRN 301
Query: 127 ---MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFE 183
M IITPAYP N+++ V+ T + + ++FQ G + W+ + P FF+
Sbjct: 302 DKIMQIITPAYPFFNTTFKVNKITFQTIFQEFQIGAQ-------KLGDWNEVLRPLDFFD 354
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQL 215
++ ++ + IV+ +++ W G+ E++ +L
Sbjct: 355 CFQYFVAISIVSKSSENFHKWTGFCEAQLPKL 386
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 147/344 (42%), Gaps = 96/344 (27%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L VD+ + RSLN V D IL VP+V FR LR ++ WAK F GGV
Sbjct: 162 ILRGVDDASQRSLN---VTDMILNLVPDVATFRTALRTIRLWAK---------SFPGGVA 209
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WALL AR+CQLYPNA PS +VS+FF +Y QW
Sbjct: 210 WALLTARICQLYPNAAPSTIVSKFFPIYYQW----------------------------- 240
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK--AQWSALFEPYL 180
MP+ITPAYP M S++N++ ST+ ++ N + + +N + W LF P
Sbjct: 241 ----MPVITPAYPSMCSTHNITQSTMTIIK------NEMLRDKIVNNPGSSWVELFTPVD 290
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN------ 234
FF Y+ Y+QV A+ A DL W R L +E N LL HP N
Sbjct: 291 FFSLYRTYVQVVASASSAQDLKDW-------LRTLVQDLEMTDNVLL-AHPQVNGISKTY 342
Query: 235 --------------------------EYIDPS-KPCPNSAFFMGLR-RKEGVTGKERQQF 266
+Y D FF+GL K+ G++ +Q
Sbjct: 343 ICLTEEEQAQASQGELPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKDGQQPRQL 402
Query: 267 DIRGTVDNFREEIGMY-MFWKPGMDIYVSHVRRRQLPSFVFPDG 309
++ F + + + M + + +R +LP+F FPDG
Sbjct: 403 NLYYASKRFCFACQSWDKYNEQDMSVILRPCKRSELPAFCFPDG 446
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 137 bits (344), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 73/88 (82%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 83 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 142
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQW 93
LVAR CQLYPNAI S LV +FF V+++W
Sbjct: 143 LVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 137 bits (344), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 73/88 (82%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 83 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 142
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQW 93
LVAR CQLYPNAI S LV +FF V+++W
Sbjct: 143 LVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 137 bits (344), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 73/88 (82%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA+
Sbjct: 83 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 142
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQW 93
LVAR CQLYPNAI S LV +FF V+++W
Sbjct: 143 LVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 138/272 (50%), Gaps = 28/272 (10%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEH----------FRMTLRCLKFWAKRRGVYSN 53
L +DE+ S+NG R I+++V EH F+ +L+ +K WA+ G+Y N
Sbjct: 302 LTMMDERDKLSINGYRCNQAIIRYV--TEHSEDKQQSKQRFQESLKVIKIWARNNGIYEN 359
Query: 54 VTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEEDELGFS 112
G+LGG++WALL+A++CQ++PN + ++ +FF Y+ W+WP V+L P +
Sbjct: 360 RLGYLGGISWALLLAKICQMFPNLEVNGIIEQFFLQYSSWKWPTMEVLLGPFSQ------ 413
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRIC-EEIELNKAQ 171
P + +++ M I TPAYP NS+ V L ++ + + NRI EEI+ +A
Sbjct: 414 ---PEERQKNQKFEMSIYTPAYPEYNSTERVKKINLEIIDYKIKEANRIIQEEIKTGQAP 470
Query: 172 WSALFEPYLFFEAYKNYLQVDIVAADADDLL----TWKGWVESRFRQLTLKIERDTNGLL 227
W L + F Y ++++D++ + D+ + T + + + L + L
Sbjct: 471 WDRLIQEEDFLNKYTKFIEIDLIRIERDETMREFKTQQDKLSVKLLTLFEFFSQKKPQEL 530
Query: 228 QCHPYPNEYIDPSKPCPN-SAFFMGLRRKEGV 258
+ P+P Y + P SAF +G++ K +
Sbjct: 531 EIRPWPFFYKKKDQKYPQCSAFLIGIKAKSHI 562
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 95 WPNPVMLCPI---EEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVM 151
WP PV+L + + L F VWDPR N D H MPIITP YP N+++ V+LS+ +M
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 152 TEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESR 211
TE+ + G I +I + +W ALFEP FF+ YK+YL + + + D L W G+ ES+
Sbjct: 63 TEELKDGFEIVSKIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAESK 122
Query: 212 FRQLTLKIERDT-NGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQ----- 265
R L +ER+ L HP P ++ S +F+GL E Q
Sbjct: 123 LRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGL----TFVKIENQNFVDLT 178
Query: 266 FDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPD 308
FDI+ + ++ K GM + + HV+RRQL +V P+
Sbjct: 179 FDIQSFTNTVHKQAYHINLMKDGMKVKIKHVKRRQLGLYVPPE 221
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 135 bits (339), Expect = 8e-29, Method: Composition-based stats.
Identities = 55/88 (62%), Positives = 72/88 (81%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GF GGV+WA+
Sbjct: 83 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFXGGVSWAM 142
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQW 93
LVAR CQLYPNAI S LV +FF V+++W
Sbjct: 143 LVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 73/89 (82%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQW 93
+LVAR CQLYPNAI S LV +FF V+++W
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 73/89 (82%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQW 93
+LVAR CQLYPNAI S LV +FF V+++W
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 73/89 (82%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAKR +YSN+ GFLGGV+WA
Sbjct: 191 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 250
Query: 65 LLVARVCQLYPNAIPSMLVSRFFRVYTQW 93
+LVAR CQLYPNAI S LV +FF V+++W
Sbjct: 251 MLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 74/277 (26%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D ++ RSL+G RV +QI++ VPN E F+ LRC+K WA++RG++ + GF G++
Sbjct: 230 LLQKIDTRSWRSLSGVRVNEQIVQLVPNAEKFQTLLRCIKLWARKRGLHCHYLGFFAGIH 289
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VC+ +P+A S L + FF+ + W W P DP ++
Sbjct: 290 LAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVP----------------DPLRH--- 330
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
FQW S LFEP+ +
Sbjct: 331 -------------------------------DFQW---------------SWLFEPFPYD 344
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
+ Y+ +L++ + A +L W GWV+SRFR L LK+ER ++C P P+E +D +
Sbjct: 345 QKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDN 401
Query: 243 CPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
PN F+ GL K + Q D +F E++
Sbjct: 402 DPNVVFYWGLIPKRII------QVDTSSLKGDFMEDL 432
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 74/90 (82%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N+D + +RSLNGCRV D+IL VPN+E+FR+TLR +K WAKR +YSN+ GFLGGV+
Sbjct: 188 LLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVS 247
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQ 92
WA+LVAR CQLYPNA+ + LV +FF V+++
Sbjct: 248 WAMLVARTCQLYPNAVAATLVHKFFLVFSK 277
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L + E VRSLNG RV D IL VP F++ LR +K WA+R+ +Y+N+ G+ GGV
Sbjct: 181 NLLRGLSENEVRSLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGV 240
Query: 62 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE--LGFSVWDPRKN 119
WA+LVARVCQLYP A +++V++FF + +W WP PV+L IE VW+P+ +
Sbjct: 241 AWAMLVARVCQLYPKATSAVVVNKFFHIMFKWPWPLPVLLKDIEYGSPVTRVPVWNPKSS 300
Query: 120 PR 121
R
Sbjct: 301 RR 302
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 70/87 (80%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WA +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWAM 248
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQ 92
LVAR CQLYPNAI S LV +FF V+++
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFSK 275
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 129/301 (42%), Gaps = 31/301 (10%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHV----PNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+D RSL G D +L+ V ++E FR LR +K WAK RGVYS+ G+LGG
Sbjct: 794 ERLDLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGG 853
Query: 61 VNWALLVARVCQLYP---NAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
+WA+L A C P + L+ FF ++ W WP PV L P R
Sbjct: 854 FSWAVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPVTLTPGTA----------R 903
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI--ELNKAQWSAL 175
P + MP++ PA P N++ NVS STLRV+ E+ + E W AL
Sbjct: 904 YVPEGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDAL 963
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE 235
F P + V + A +D GW+ L ++E D L+ P+P
Sbjct: 964 FAPVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLR--PFP-- 1019
Query: 236 YIDPSKPCPNSAFFMGLRRKEGVTGKERQQF---DIRGTVDNFREEIGMYMFWKPGMDIY 292
PS+ P F +GL + G+ ++ +D FRE + PG +
Sbjct: 1020 ---PSQ--PEGPFRIGLSAQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLS 1074
Query: 293 V 293
V
Sbjct: 1075 V 1075
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 129/301 (42%), Gaps = 31/301 (10%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHV----PNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+D RSL G D +L+ V ++E FR LR +K WAK RGVYS+ G+LGG
Sbjct: 738 ERLDLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGG 797
Query: 61 VNWALLVARVCQLYP---NAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
+WA+L A C P + L+ FF ++ W WP PV L P R
Sbjct: 798 FSWAVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPVTLTPGTA----------R 847
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI--ELNKAQWSAL 175
P + MP++ PA P N++ NVS STLRV+ E+ + E W AL
Sbjct: 848 YVPEGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDAL 907
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE 235
F P + V + A +D GW+ L ++E D L+ P+P
Sbjct: 908 FAPVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLR--PFP-- 963
Query: 236 YIDPSKPCPNSAFFMGLRRKEGVTGKERQQF---DIRGTVDNFREEIGMYMFWKPGMDIY 292
PS+ P F +GL + G+ ++ +D FRE + PG +
Sbjct: 964 ---PSQ--PEGPFRIGLSAQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLS 1018
Query: 293 V 293
V
Sbjct: 1019 V 1019
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 128/257 (49%), Gaps = 21/257 (8%)
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
NP DR H MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEA 61
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYP 233
FF+ YK+Y+ + A L W G VES+ R L +E++ L Q P P
Sbjct: 62 PNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAP 121
Query: 234 NEYIDPSKPCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGM 289
E +P K + + +GL K+ + +DI+ D +R+ I MF + M
Sbjct: 122 KE--NPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDM 178
Query: 290 DIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHE 349
I HV+R+QL + PS ++ E V++ S L + ++
Sbjct: 179 KIAAMHVKRKQLHQLL---------PSHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNS 229
Query: 350 MEEVRPDKSVKRASISS 366
M P ++K + ++S
Sbjct: 230 MSVPSPTSAMKTSPLNS 246
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 39/277 (14%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L +D + RSL+G RV +QI++ VPN + F++ LRC+K WAKRRG++ ++ GF G++
Sbjct: 185 LLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIH 244
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
A+L A VCQ YP ++ + P R
Sbjct: 245 LAILAAYVCQRYPYGTINVSLHG-----------------------------QPTNCRRP 275
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
MPI+ P P + N++ T + + E+ G + +E + +W LF P+ +
Sbjct: 276 DGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYA 335
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKP 242
Y+ +L++ + A +++L W GWV+SRF L LK+E ++C P E +D
Sbjct: 336 TKYEEFLRIALCAPTSEELRDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVD---- 387
Query: 243 CPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
++ F + G+ K DI ++F +++
Sbjct: 388 --HTVFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDV 422
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 5 NNVDEQTVRSLNGCR----VADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+D +R++ G + D + + E FR LR +K WA+ RG+YS+ G+LGG
Sbjct: 724 EQLDPAGLRAVLGLADTLGLMDAVARDAARTERFRTLLRAVKAWARARGIYSHALGYLGG 783
Query: 61 VNWALLVARVC-QLYPNAIPS--MLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
++W LL A C + P+A+ S L+S FF + W WP PV L P R
Sbjct: 784 LSWTLLAAWACTRATPDAMRSDAALLSHFFGTFAAWPWPQPVTLTPETA----------R 833
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKA--QWSAL 175
P + +P+I PA P N++ NVS ST RV+ E+ + ++A W+AL
Sbjct: 834 YRPEGKRDLLPVIAPALPARNTARNVSRSTYRVIREELLRARELVARARSSRAPSSWAAL 893
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD 222
F+P E L++ + A A+D GW+ L ++E D
Sbjct: 894 FQPLSAHETSPAALRLSVDAPTAEDREVVAGWILGHVTALVYRLEGD 940
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 38/293 (12%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEH--FRMTLRCLKFWAKRRGVYSNVTGFLG 59
S L V T S+NG R ++ + +P V H F L+ +KFWA RR VY N+ +
Sbjct: 25 SFLLQVARDTRPSVNGIRFTFEVRRRLP-VPHKVFATVLKAVKFWAMRRQVYGNIYTYPN 83
Query: 60 GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWR----WPNPVMLCPIEEDELGF---- 111
G +A++VARVCQ+ P+ PS+L+ FF YTQW +PV L E
Sbjct: 84 GAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSRHDHISPVYLTATLESRGRIPGLP 143
Query: 112 SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRIC---EEIELN 168
W P KN R P+I+PAYP +N + NV L + + R+ + + L
Sbjct: 144 ESWKPAKNECFRD-LFPVISPAYPYVNDASNVGRCGLESLYSEITQAQRVISASDTLSLE 202
Query: 169 KAQWSALFEPYLFFEAYKNYLQVDIVA-----ADADDLL-TWKGWVESRFRQLTLKIERD 222
K L+ PY E + ++L V++ + ADA+ +L W +V S+ R L +ER
Sbjct: 203 K-----LWRPYCIMEDFAHFLLVEVSSLGDDMADAERILGRWGSYVGSKLRFLIYSVER- 256
Query: 223 TNGLLQCHPYPNE--------YIDPSKPCPNSAFFMGLRRKEGVTGKERQQFD 267
+ P+P++ ++D C + F +G+R K + R FD
Sbjct: 257 ---FVHARPHPHKLRAKMDGTFVDRKVCCSSIYFLIGVRSKNSGSSLRRCMFD 306
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 57 FLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEE-DELG---FS 112
F GG+ WA+LVARVCQ++PN LV RFF + ++W W NPV LCPI + E+G F
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRI 161
VW+P++ DRSH MP+ITPA+P MNS+YNV+ +T R++ + + +++
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKL 109
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S+L +++ + VRSLNGCRV D+IL VPN +FR TL +K WAK++G+YS V GFLGGV
Sbjct: 179 SLLRHLNTKCVRSLNGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGV 238
Query: 62 NWALLVARVCQLYPNAIPSMLVSRF 86
+WA+LVARVCQLYPNA P+ L+ +F
Sbjct: 239 SWAILVARVCQLYPNAAPATLLHKF 263
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 37/169 (21%)
Query: 13 RSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 72
+ LNG RVA+Q+L VPN + F +LR +K WAK GVYSN GF GG+ WA+LVAR CQ
Sbjct: 70 KILNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVARTCQ 127
Query: 73 LYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITP 132
LYPNA PS ++ + F V++ W WP+PV+L
Sbjct: 128 LYPNAAPSKIIQKVFLVFSTWNWPSPVIL------------------------------K 157
Query: 133 AYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
+ C++S +TL ++ ++ + +IC I+ A W+ L + F
Sbjct: 158 HFDCVDSK-----TTLHIIQKEMKAALKICNRIQKGNATWNDLANWFRF 201
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 61/83 (73%)
Query: 57 FLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDP 116
FLGGV+WA+LVAR CQLYPNAI S LV +FF V +W WPNPV+L EE L VWDP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 117 RKNPRDRSHHMPIITPAYPCMNS 139
R NP DR H MPIITPAYP NS
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQNS 83
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 31/288 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V T S+NG R ++ + +P + F L+ +K WA RR VY N+ + G
Sbjct: 156 SFLLQVARDTRHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSG 215
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWR----WPNPVMLCPIEEDELGF----S 112
V A++VAR+CQ+ P + P++L+ FF YTQW +PV + E
Sbjct: 216 VVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYITTSLESRGRIPGLPD 275
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQW 172
WDPR++ R +P+I PAYP +N + NV +L V + + R+ +E
Sbjct: 276 SWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLE---TPL 331
Query: 173 SALFEPYLFFEAYKNYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIERDTNGL 226
A++EPY + Y + V + + ++ L W +V S+ R L +ER +
Sbjct: 332 EAIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----I 387
Query: 227 LQCHPYPNEYID-PSKPCPNSA-------FFMGLRRKEGVTGKERQQF 266
+ PYP + D P + P S F +G++ K G ++ F
Sbjct: 388 VDARPYPQKLNDGPPRSAPKSGRFLKGSCFIVGIKEKVGRRFPQKNMF 435
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWA 64
N+D + +RSLNGCRV D+IL VPN+++FR+TLR +K WAK +YSN+ GFLGGV+WA
Sbjct: 291 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKIWAKHHNIYSNILGFLGGVSWA 350
Query: 65 LLVARVCQLYPNAIPSMLVSR--FFRVY 90
+LVAR CQLYPNAI S S F+ Y
Sbjct: 351 MLVARTCQLYPNAIASTQTSAHYIFQTY 378
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 115 bits (289), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/76 (61%), Positives = 60/76 (78%)
Query: 18 CRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 77
CRVAD+IL+ VPN+ +F LR +K WAK G+YSNV G+LGGV+WA+LVAR CQLYPN
Sbjct: 1 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60
Query: 78 IPSMLVSRFFRVYTQW 93
P+ LV +FF +YT+W
Sbjct: 61 GPARLVQKFFLLYTKW 76
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 71/108 (65%)
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQW 172
VWDPR NP DR H MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+W
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEW 60
Query: 173 SALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
S LFE FF+ YK+Y+ + A L W G VES+ R L +E
Sbjct: 61 SKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 124/249 (49%), Gaps = 22/249 (8%)
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYK 186
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ YK
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
Query: 187 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL-----QCHPYPNEYIDPSK 241
+Y+ + A L W G VES+ R L +E++ L Q P P E +P K
Sbjct: 61 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPDK 118
Query: 242 PCPNSAFFMGLRRKEGVTGKERQ---QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVR 297
+ + +GL K+ + +DI+ D +R+ I MF + M I HV+
Sbjct: 119 EEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 177
Query: 298 RRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDK 357
R+QL + P+ ++ E VK+ Q S+ L + ++ M P
Sbjct: 178 RKQLHQLL---------PNHVLQKKKKVNLEKVKL-QCASNSLDLSMDSDNSMSVPSPTS 227
Query: 358 SVKRASISS 366
+ K + ++S
Sbjct: 228 ATKTSPLNS 236
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 29/271 (10%)
Query: 95 WPNPVMLCPIEEDE------LGFSVWDPR------KNPRDRSHHMPIITPAYPCMNSSYN 142
WP+PV+L E L VWDPR ++P R H MPI+TPA+P NS++N
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 143 VSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLL 202
V+ S+L+++ + + G +I KA WSALFE FF YK++L + ++A D L
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSATEQDEL 156
Query: 203 TWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNSA---------FFMGLR 253
W G VES+ R L +ER + CH + Y + P P +F+GL
Sbjct: 157 VWCGLVESKIRFLIASLERR-ESIRVCHVHTKYYQPRNDPFPVQVSLQNPRCRLWFIGLD 215
Query: 254 RKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFV----FPDG 309
+ V+ K Q +++ +D + GM + ++R+ +L ++ G
Sbjct: 216 LNKTVSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELVKWLKMEDLTRG 275
Query: 310 YKRPRPSR---HFNEQAGKPCEDVKMCQSGS 337
K P+ R N+QA P ++ ++ S
Sbjct: 276 KKAPKRRRIATSQNQQATGPSQNKARSETSS 306
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 56 GFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWD 115
GF G++ A+L A VC+ +P+A S L + FF+ + W W PV L DEL +
Sbjct: 12 GFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSL----HDELTTCL-- 65
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSAL 175
MPI+ P P + V+ +L+ + E+ G + + + QWS L
Sbjct: 66 -----HSEGRLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWL 120
Query: 176 FEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE 235
FEP+ + + Y+ +L++ + A +L W GWV+SRFR L LK+ER ++C P P+E
Sbjct: 121 FEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSE 177
Query: 236 YIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
+D + PN F+ GL K + Q D +F E++
Sbjct: 178 EVDHTDNDPNVVFYWGLIPKRII------QVDTSSLKGDFMEDL 215
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 37/267 (13%)
Query: 14 SLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 72
++NG R +I + +P ++ + LR +K+WA +R VY N+ F GV A++VAR CQ
Sbjct: 87 TVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQ 146
Query: 73 LYPNAIPSMLVSRFFRVYTQWRW----PNPVMLCPIEEDELGFSV------WDPRKNPRD 122
P A +++ FF +Y W +PV + P EED V WD D
Sbjct: 147 FCPVADSGVILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMPPPWDAVW---D 203
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ P++ PA P +N+++ V S L++ ++ ++C + L+ +S L++PY
Sbjct: 204 AADLFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVPLS---YSELWKPYNIL 260
Query: 183 EAYKNYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ ++ ++ V I +AA D + WKG+VES+ R L +E + + P+P
Sbjct: 261 DEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----CVAEVRPFPRPV 316
Query: 237 IDPSKP----------CPNSAFFMGLR 253
+D S C + AFF G+R
Sbjct: 317 VDESPREVTRSGVTMHCRSRAFFFGVR 343
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 16/241 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPN--VEHFRMTLRCLKFWAKRRGVYSNVTGFLG 59
++L N+DE R++NG R D I VPN E FR+ +R +K W K+RG+Y V FL
Sbjct: 151 NILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLN 210
Query: 60 GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRW-PNPVMLCPIEEDELGFSVWDPRK 118
G++ +LVA+V L+ +FF+VY+ W W PVML D+
Sbjct: 211 GISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLRTPVMLGT--NDDF--------- 259
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSALFE 177
N + + + I+TPA P N++++++ +L ++ + + G I E W+ LF+
Sbjct: 260 NDKKKEGIIQILTPASPSENAAFSITKFSLEMIKRELKRGQEIVHEFSSEGVNDWAKLFK 319
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
P F Y +++ + ++ + L T G ES L +K + +++ + PN ++
Sbjct: 320 PRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNL-MKGLSEIEEIIEANVIPNGFL 378
Query: 238 D 238
D
Sbjct: 379 D 379
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 16/241 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPN--VEHFRMTLRCLKFWAKRRGVYSNVTGFLG 59
++L N+DE R++NG R D I VPN E FR+ +R +K W K+RG+Y V FL
Sbjct: 151 NILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLN 210
Query: 60 GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRW-PNPVMLCPIEEDELGFSVWDPRK 118
G++ +LVA+V L+ +FF+VY+ W W PVML D+
Sbjct: 211 GISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLRTPVMLGT--NDDF--------- 259
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSALFE 177
N + + + I+TPA P N++++++ +L ++ + + G I E W+ LF+
Sbjct: 260 NDKKKEGVIQILTPASPSENAAFSITKFSLEMIKRELKRGQEIVHEFSSEGVNDWAKLFK 319
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
P F Y +++ + ++ + L T G ES L +K + +++ + PN ++
Sbjct: 320 PRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNL-MKGLSEIEEIIEANVIPNGFL 378
Query: 238 D 238
D
Sbjct: 379 D 379
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 111 bits (278), Expect = 8e-22, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 2 SVLNNVDE-QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
SVL +D+ T RSLNG RVAD+IL+ VP FR LRC+K WAK RGVYSNV GFLGG
Sbjct: 32 SVLRGLDDLATARSLNGIRVADEILRLVPETAVFRTMLRCVKHWAKARGVYSNVAGFLGG 91
Query: 61 VNWALLVARVCQLYPNAIPS 80
+ WA+LVAR+CQLYPN P+
Sbjct: 92 IGWAILVARMCQLYPNTSPA 111
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 133/267 (49%), Gaps = 37/267 (13%)
Query: 14 SLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 72
++NG R +I + +P ++ + LR +K+WA RR VY N+ F GV A++VAR CQ
Sbjct: 170 TVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAARRQVYGNLYTFPNGVCLAIMVARACQ 229
Query: 73 LYPNAIPSMLVSRFFRVYTQWRW----PNPVMLCPIEEDELGFSV------WDPRKNPRD 122
L P A S+++ FF +Y W +PV + P +E+ V WD D
Sbjct: 230 LCPVADSSVILRFFFSLYVWWLQRGTRIDPVSIVPTDENVAIARVPGMPPPWDAVW---D 286
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
+ P++ PA P +N+++ V S L++ ++ ++C + + +SAL+EPY
Sbjct: 287 AADLFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCSLVPM---PYSALWEPYNVL 343
Query: 183 EAYKNYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ ++ ++ V I +AA D + WKG+VES+ R +E + + P+P
Sbjct: 344 DEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFPCPV 399
Query: 237 ID-PSKP---------CPNSAFFMGLR 253
+D P + C + AFF G+R
Sbjct: 400 VDEPPRAVTRRGVTVHCRSRAFFFGVR 426
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 16/241 (6%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPN--VEHFRMTLRCLKFWAKRRGVYSNVTGFLG 59
++L N+DE R++NG R D I VPN E FR+ +R +K W K+RG+Y V FL
Sbjct: 151 NILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLN 210
Query: 60 GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN-PVMLCPIEEDELGFSVWDPRK 118
G++ +LVA+V L+ +FF+VY+ W W PVML D+
Sbjct: 211 GISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLRAPVMLGT--NDDF--------- 259
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSALFE 177
N + + + I+TPA P N++++++ +L ++ + + G I E W+ LF+
Sbjct: 260 NDKKKEGVIQILTPASPSENAAFSITKFSLELIKRELKRGQEIVHEFSSEGVNDWAKLFK 319
Query: 178 PYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
P F Y +++ + ++ + L T G ES L +K + +++ + PN ++
Sbjct: 320 PRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNL-MKGLSEIEEIVEANVIPNGFL 378
Query: 238 D 238
D
Sbjct: 379 D 379
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 37/255 (14%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+ N+D +VRSL+G +A ++ K + HF LR ++ W + R + S V GF +
Sbjct: 76 LYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPLLRVIRTWVRARAIGSYVYGFPASIA 135
Query: 63 WALLVARVCQ-LYPNAIPSM-----------------------------------LVSRF 86
W ++V +C+ L N+ S LV F
Sbjct: 136 WTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEPAAERNSGEESLASRSHALFCLVYTF 195
Query: 87 FRVYTQWRWPNPVMLCPIE-EDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSL 145
F + W WP+PV + I+ +L WDP++N +D MPI+TP +P N+++ V
Sbjct: 196 FAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNAQDGRDLMPILTPVFPNKNAAFTVRQ 255
Query: 146 STLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWK 205
+T +++T++ I ++ W LFE Y + ++++L + + ++L+
Sbjct: 256 ATRKIVTDELIRARDIVSDVLRGSGTWEKLFERYDLRDDHRHFLLLTLQTTSKEELVVVG 315
Query: 206 GWVESRFRQLTLKIE 220
G ++SR R L +E
Sbjct: 316 GLIDSRLRDLAQALE 330
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 122 DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
DR H MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP F
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 60
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP----- 233
F+ Y++Y+ + A+ ++ W G VES+ R L +ER+ T + +P
Sbjct: 61 FQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 120
Query: 234 ---NEYIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKP 287
N Y+ S +F+G+ RR E +DI+ D + K
Sbjct: 121 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 172
Query: 288 GMDIYVSHVRRRQL 301
GM I +HV+++QL
Sbjct: 173 GMKIEATHVKKKQL 186
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 120/252 (47%), Gaps = 38/252 (15%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL NVD + R L+G R QI++ VPN++ + GF G++
Sbjct: 296 VLENVDGPSWRCLSGVRANRQIIQLVPNMK---------------------LLGFFAGIH 334
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR- 121
A+L A VC+ +PNA + L+S FF ++ W WP PV S+ DP R
Sbjct: 335 LAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPLPV------------SLLDPPVLCRG 382
Query: 122 -DRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
D MPI+ P P S + + ST + E+ + G + ++ WS LF +
Sbjct: 383 PDGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEELRRGYALTKDTRSTDFDWSWLFASFP 442
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
+ YK +L++ + A ++L W GWV+SRFR L LK+E + C P +E +D +
Sbjct: 443 YGARYKCFLRIVLSAPLDEELRDWVGWVKSRFRNLLLKLESLG---VYCDPDSSEQVDHT 499
Query: 241 KPCPNSAFFMGL 252
PN FF GL
Sbjct: 500 ITEPNVVFFWGL 511
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 27/205 (13%)
Query: 49 GVYSNVTGFLGGVNWALLVARVC---QLYPN-----------AIPSMLVSRFFRVYTQWR 94
G+YSN GFLGG +W++LVA VC +LY +I L++ FF VY W
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752
Query: 95 WPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQ 154
W PV + P R P +S MPI+TP P NS+ NV+ STL M ++
Sbjct: 753 WQQPVAITPGSA----------RYKPGHKSDKMPIVTPTPPFNNSARNVARSTLTEMQQE 802
Query: 155 FQWGNRICEEIELN-KAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFR 213
F I + + N +A + L +P FF+ Y YL V++ + +D++ GW+ESR
Sbjct: 803 FFRAFDITQAPQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRLI 862
Query: 214 QLTLKIERDTNGLLQCHPYPNEYID 238
L +E+ N P+P +++
Sbjct: 863 ALIFDLEK--NPQTYARPFPGTFVN 885
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 108 bits (269), Expect = 9e-21, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 2 SVLNNVDE-QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
SVL +D+ T SLNG RVAD+IL+ VP FR LRC+ WAK RGVYSNV GFLGG
Sbjct: 32 SVLRGLDDLATAHSLNGIRVADEILRLVPETAMFRTMLRCVNHWAKARGVYSNVAGFLGG 91
Query: 61 VNWALLVARVCQLYPNAIPS 80
+ WA+LVAR+CQLYPN P+
Sbjct: 92 IGWAILVARMCQLYPNTSPA 111
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 96/181 (53%), Gaps = 45/181 (24%)
Query: 94 RWPNPVMLCPIEED--ELGFS------VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSL 145
+WP P++L IEE+ EL FS VW+PR DR+H MPIITP+YP M S++NV+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 146 STLRVMTEQF------------------QWGNRICEEIELNKAQWSALFEPYLFFEAYKN 187
ST+ VM ++F + G++I E+I +A+WS LF + FF+ Y+
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRAEWSELFAKHDFFQKYRY 194
Query: 188 YLQVDIVAADADDLLTW----------------KGWVESRFRQLTLKIERDTNGLLQCHP 231
YLQ+ + A+D L W G VESR RQL +K+E + L HP
Sbjct: 195 YLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLEF-VDQLEVAHP 253
Query: 232 Y 232
+
Sbjct: 254 F 254
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 20/246 (8%)
Query: 13 RSLNGCRVADQILKHVPN---VEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
+S+ GC AD I+ V +E F+M L+ ++ WAK RG+Y N GFLGG +W+LL A
Sbjct: 744 KSIVGCWEADLIVDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAY 803
Query: 70 VCQLY--PNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHM 127
C Y P+ + L++ FF++ +Q W + L ELG K P+D +
Sbjct: 804 TCIDYRGPDKSLAALLANFFQILSQHNWRQTIALT-----ELGKQ--HQVKLPQDL---L 853
Query: 128 PIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKN 187
PII+ PC N++ N++ ST +++ ++F I I + K W++L+EP
Sbjct: 854 PIISSIEPCKNTARNITRSTAKILRDEFARAAEISTNILVGKDAWTSLYEPIDLTIGTNA 913
Query: 188 YLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNSA 247
L ++I+ D +ES LT+++E+ L PN I S+
Sbjct: 914 LLSIEILDTDEQCRQKCSDLLESTIIGLTIQLEQ-----LDVFVRPNPQISTSESKSIFT 968
Query: 248 FFMGLR 253
F+ LR
Sbjct: 969 LFLQLR 974
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L ++ E+ V SLNG R I+ V + E F+ TL+ +K WAK +GVY+N+ GFLGG++
Sbjct: 100 LLEDMTEKDVDSLNGRRCNQSIINSVKDQEKFKNTLKFIKLWAKSKGVYNNMLGFLGGIS 159
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
WA+LVA++CQ++PN + L++ FF YT W + PI+ E + N +
Sbjct: 160 WAILVAKICQMFPNYEVNQLINEFFYYYTHWDFSQ----IPIKIKEYYENTKHKHYNIKK 215
Query: 123 R--SHHMPIITPAYPCMNSSYNVS 144
R S M ++T +P NS+ ++S
Sbjct: 216 RKESIFMNVMTSCFPEYNSTAHLS 239
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 37/267 (13%)
Query: 14 SLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 72
++NG R +I + +P ++ + LR +K+WA +R VY N+ F GV A++VAR CQ
Sbjct: 170 TVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQ 229
Query: 73 LYPNAIPSMLVSRFFRVYTQWRWPN----PVMLCPIEEDELGFSV------WDPRKNPRD 122
L P A +++ FF +Y W + PV + P +E+ V WD + D
Sbjct: 230 LCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAIARVPGMPPPWDAVWDAAD 289
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
P++ PA P +N+++ V S L++ ++ ++C + ++ +SAL+EPY
Sbjct: 290 L---FPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---YSALWEPYNIL 343
Query: 183 EAYKNYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ ++ ++ V I +AA D + WKG+VES+ R +E + + P+
Sbjct: 344 DEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFSRPV 399
Query: 237 ID-PSKP---------CPNSAFFMGLR 253
+D P + C + AFF G+R
Sbjct: 400 VDEPPRVVTRRGVKVHCRSRAFFFGVR 426
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 22/189 (11%)
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYK 186
MPIITPAYP NS+YNVS ST VM E+F+ G + +EI K+ WS L EP FF+ Y+
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 60
Query: 187 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD---TNGLLQCHPYP--------NE 235
+Y+ + A+ ++ L W G VES+ R L +ER+ T + +P N
Sbjct: 61 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNN 120
Query: 236 YIDPSKPCPNSAFFMGL--RRKEGVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIY 292
Y+ S +F+G+ RR E +DI+ D + K GM I
Sbjct: 121 YV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIE 172
Query: 293 VSHVRRRQL 301
+HV+++QL
Sbjct: 173 ATHVKKKQL 181
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 37/267 (13%)
Query: 14 SLNGCRVADQILKHVPNV-EHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 72
++NG R +I + +P + + LR +K+WA +R VY N+ F GV A++VAR CQ
Sbjct: 170 TVNGIRTILEIRRRLPLLLAAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQ 229
Query: 73 LYPNAIPSMLVSRFFRVYTQWRWPN----PVMLCPIEEDELGFSV------WDPRKNPRD 122
L P A +++ FF +Y W + PV + P++E+ V WD + D
Sbjct: 230 LCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPPPWDAVWDAAD 289
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFF 182
P++ PA P +N+++ V S L++ ++ ++C + ++ +SAL+ PY
Sbjct: 290 L---FPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---YSALWAPYNIL 343
Query: 183 EAYKNYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ ++ ++ V I +AA + + WKG+VES+ R +E + + P+P
Sbjct: 344 DEHRFFVGVHISSEHQSLAACEEAINAWKGYVESKLRMFVYALE----CVAEVRPFPRPV 399
Query: 237 ID-PSKP---------CPNSAFFMGLR 253
+D P + C + AFF G+R
Sbjct: 400 VDEPPRAVTRRGVTVHCRSRAFFFGVR 426
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 22/261 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPN---VEHFRMTLRCLKFWAKRRGVYSNVTGFLG 59
+L NV E T+ SL GCR + +++ + + ++ FR T ++F+ K+ +Y NV G+LG
Sbjct: 45 ILRNVSEHTLHSLTGCRCTEFVIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLG 104
Query: 60 GVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCP-IEEDELGFSVWDPRK 118
GVN +L+A L + + + FF + + P + ELGF +
Sbjct: 105 GVNITILLASTNLLENDFLTNTF--HFFHFVADHLGSEIIAMTPQLSFPELGFDEENWSD 162
Query: 119 NPRDRSHH--MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF 176
P + S+H + ++TP YP MN++ +S S+L+ + Q R+ E+I+ S L
Sbjct: 163 KPSNFSNHDSLVLLTPTYPRMNTARTISRSSLQFIRSQ---ARRVYEKIKSYVDGESTLL 219
Query: 177 ---EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE-RDTNGLLQCHPY 232
EPY FFE + Y +V + A+ + W G VES+ R L + R N L +P
Sbjct: 220 QMVEPYQFFEGFPIYFEVLVSASANSEFKDWLGLVESKIRYLVFFLSLRIENVALNPNPI 279
Query: 233 PNEYIDPSKPCPNSA-FFMGL 252
SK N+A F++GL
Sbjct: 280 ------VSKSNSNAACFYIGL 294
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 124/279 (44%), Gaps = 31/279 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V +T S NG R +I + +P + F L+ +K WA RR VY NV + G
Sbjct: 156 SFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNG 215
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWR----WPNPVMLCPIEEDELGF----S 112
A++VARVCQ+ P++ PS L+ FF YTQW +PV L E
Sbjct: 216 AVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPD 275
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRI-CEEIELNKAQ 171
W P K+ + P+I+PAYP +N + +V L + + R+ C E+
Sbjct: 276 SWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEI---TRVQCILTEVRTLP 331
Query: 172 WSALFEPYLFFEAYKNYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIERDTNG 225
++EPY E Y +L V + +A L W +V SR R L IER
Sbjct: 332 LEEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA-- 389
Query: 226 LLQCHPYP-------NEYIDPSKPCPNSAFFMGLRRKEG 257
Q P P + ++ S + F +G++ KEG
Sbjct: 390 --QARPCPRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEG 426
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 122/275 (44%), Gaps = 23/275 (8%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V +T S NG R +I + +P + F L+ +K WA RR VY NV + G
Sbjct: 156 SFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNG 215
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPN----PVMLCPIEEDELGF----S 112
A++VARVCQ+ P++ PS L+ FF YTQW + PV L E
Sbjct: 216 AVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPD 275
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRI-CEEIELNKAQ 171
W P K+ + P+I+PAYP +N + +V L + + R+ C E
Sbjct: 276 SWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEI---TRVQCILTEARTLP 331
Query: 172 WSALFEPYLFFEAYKNYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIERDTNG 225
++EPY E Y +L V + +A L W +V SR R L IER
Sbjct: 332 LEEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHAQA 391
Query: 226 L---LQCHPYPNEYIDPSKPCPNSAFFMGLRRKEG 257
+ P + ++ S + F +G++ KEG
Sbjct: 392 RPCPRKIRPKKDNHVGGSSCFLSVNFLIGVKAKEG 426
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 25/281 (8%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVP--NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
+L+ +DE + R++NG R D I VP +VE F++ +R +K W+K+RG+Y V +L G
Sbjct: 152 ILDEMDELSTRAINGRRNTDMINNFVPPHSVEAFKVIVRAIKMWSKKRGIYGYVYSYLNG 211
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWP-NPVMLCPIEEDELGFSVWDPRKN 119
++ +LVA+V L+ +FF Y W W NPVML V D R
Sbjct: 212 ISIEILVAQVISENYQLDNVRLLEKFFHAYATWDWARNPVML----------GVSDDRP- 260
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ-WSALFEP 178
R + + +ITPA P NS YN++ S+L ++ + G RI + + W+ LF+
Sbjct: 261 ERKKEEMVQVITPAAPRENSMYNMTRSSLELLKREMLRGERIVKGYKSEGGNDWNLLFKK 320
Query: 179 YLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYID 238
F Y +++ V + L G ES+ + +E + +++ + P Y++
Sbjct: 321 RHCFCGYYIFVEFS-VRGSLESLENKIGMFESKIVRFVRSLE-EMEEVIEVNVIPEGYLE 378
Query: 239 PSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
+++G+ K+ + D+ ++ F E++
Sbjct: 379 VENAV--DYYYVGMNVKKDLL------VDVSAPLNAFLEDV 411
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 14 SLNGCRVADQILKHVPN---VEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
++ GC AD I + V + F+ LR ++ WAK R +Y N GFLGG++WALL A
Sbjct: 811 AIIGCWEADFIREFVQEYVPFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWS 870
Query: 71 CQL--YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMP 128
CQ + P L++ FF Q+ W P+ L + +SV + PRD +P
Sbjct: 871 CQYCDKNHTQPDKLLANFFNHLNQYNWRQPIALTDAGKQ---YSV----QVPRDL---LP 920
Query: 129 IITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNY 188
IIT PC N++ N++ ST +++ +F + +EI WS+LFEP + +
Sbjct: 921 IITSIEPCQNTARNITRSTAEILSGEFARATEMTQEIAAGNLDWSSLFEPINLQQESDIF 980
Query: 189 LQVDIVAADADDLLTWKGWVESRFRQLTLKIE 220
L + ++ D L G++E L +++E
Sbjct: 981 LNLKLIGNDKQQLEKECGYLEGYIISLIIQLE 1012
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 147/301 (48%), Gaps = 29/301 (9%)
Query: 4 LNNVDEQTVRSLNG---CRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
++ ++ + SLNG C + ++K+ PN +F R ++ WA++R ++ N+ G+L G
Sbjct: 171 MDKLEPKAQLSLNGYLNCLLIRDLMKNHPNFPYFT---RFIRNWAQKREIFGNLYGYLKG 227
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
+N +++ A +C +PN SML+ FF ++ W W + L + + F + DP
Sbjct: 228 INISMMCAIICNQHPNCSLSMLIFHFFEYFSSWDWDIQLNL---DSNTPDFQLNDP---- 280
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL 180
M ++T +YP +NS V+ S+ + + ++ Q ++ ++ W LF+
Sbjct: 281 ------MILMTQSYPQINSLRAVTTSSRKRIIKELQRALETTKKALISDLSWQELFKGGC 334
Query: 181 FFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPS 240
FF Y+ +L +D++ ++ G++ S+ +L +KI + G+ + + +P++
Sbjct: 335 FFADYRYFLCIDLIPTNSQIKDEIIGFLSSKLTRL-VKILEEIPGICEANIWPSKISYGG 393
Query: 241 KPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQ 300
K F++GL K G + + DI +NF I K M I +R+++
Sbjct: 394 KII----FYIGLNTKSG----QSKTIDINHAKNNFISYISSSTLGK-AMSINFKIIRKKE 444
Query: 301 L 301
L
Sbjct: 445 L 445
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 123/279 (44%), Gaps = 31/279 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V +T S NG R +I + +P + F L+ +K WA RR VY NV + G
Sbjct: 156 SFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNG 215
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWR----WPNPVMLCPIEEDELGF----S 112
A++VARVCQ+ P++ PS L+ FF YTQW +PV L E
Sbjct: 216 AVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPD 275
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRI-CEEIELNKAQ 171
W P K+ + P+I+PAYP +N + +V L + + R+ C E
Sbjct: 276 SWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEI---TRVQCILTEARTLP 331
Query: 172 WSALFEPYLFFEAYKNYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIERDTNG 225
++EPY E Y +L V + +A L W +V SR R L IER
Sbjct: 332 LEEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA-- 389
Query: 226 LLQCHPYP-------NEYIDPSKPCPNSAFFMGLRRKEG 257
Q P P + ++ S + F +G++ KEG
Sbjct: 390 --QARPCPRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEG 426
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 67/93 (72%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
+L N++E+ + SL+G R I++ VPN+++F++T R +K WA+ +G+Y N GFLGG++
Sbjct: 199 LLQNMEERDILSLSGRRCNQAIVRSVPNLQNFQITCRFIKLWAQSKGIYENSIGFLGGIS 258
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRW 95
WA+LVA++CQ++PN + L+ FF Y+ W +
Sbjct: 259 WAILVAKICQMFPNYEANQLLDEFFYYYSNWDF 291
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 102 bits (253), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/65 (67%), Positives = 52/65 (80%)
Query: 16 NGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 75
+G RVAD+IL+ VP+ FR LRC+K WAK RGVYSNV GFLGG+ WA+LVARVCQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 76 NAIPS 80
N P+
Sbjct: 69 NTSPA 73
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
SVL D Q V G A E FR LR +K WAK RG+YS+ G++GG+
Sbjct: 738 SVLGVADSQGVLDALGTDEATH--------ERFRNLLRAVKRWAKARGIYSHALGYMGGL 789
Query: 62 NWALLVARVC-QLYPNAIPS--MLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRK 118
+W +L A C + P+A S L++ FF+ + W WP PV L ++ G+
Sbjct: 790 SWTVLAAWACTRGAPDAAKSDAELLAHFFQTFASWPWPQPVALT---QETAGY------- 839
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKA--QWSALF 176
P + MP+I PA P N++ NVS ST R + E+ + + + W LF
Sbjct: 840 RPDGKRDLMPVIAPAEPLRNTARNVSRSTFRTVREELVRARELVTGARASSSPHAWEPLF 899
Query: 177 EPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERD 222
+P L++ + A + GWV L ++E D
Sbjct: 900 QPVDAPRDLPARLRLSVEAPTPEAHEAAMGWVLGHLTALVYRLEGD 945
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 118/241 (48%), Gaps = 28/241 (11%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
S L N+ T++ L R +L +PN+ +R+ R +K WA+++GVYS+ GF GGV
Sbjct: 729 SPLWNLTVPTLKKLQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGGV 788
Query: 62 NWALLVARVCQLY-PNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
+ +LL+ARV L P A S L++ FF Y+ +W + V+ P L + ++
Sbjct: 789 HISLLLARVAMLLPPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRY-----QRAT 843
Query: 121 RDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY- 179
RD+ M I+T P +N + N ++ T+ ++ + + + + EL+ A +S + +
Sbjct: 844 RDK---MVILTINTPVINVAANATIHTVHTLSSELE---KAAAKFELD-ATFSDVVGSFG 896
Query: 180 ------------LFFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNG 225
F Y Y++VD+ + GWVESR L +++ R T G
Sbjct: 897 DDTSKEIPIGVNEFLGGYNRYIKVDVQFWGLNRQGGRALVGWVESRLVGLLVELGRQTPG 956
Query: 226 L 226
L
Sbjct: 957 L 957
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 17/168 (10%)
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQW 172
VWDPR N DR H MPIITPA+P NS++NVS STL ++ E+ + IC++I A W
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSATW 215
Query: 173 SALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
+ LFE FF Y++++ + + + G+ ESR RQL +ER+ L H
Sbjct: 216 NNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKL-AHIN 268
Query: 233 PNEYIDPSKPCPN-SAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
P ++ K N S +F+GL E V + D+ ++ F++ +
Sbjct: 269 PKKF----KSVQNASVWFLGLELIENV-----KNLDLTAEIEGFKKNV 307
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 11/237 (4%)
Query: 2 SVLNNVDEQTVRSLNGCRV----ADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGF 57
S+L ++DE + S++G RV +QI + +V F++ L+C+K WA +RG+YS G+
Sbjct: 156 SLLKDIDETCLASMDGPRVNQFCKNQIYRQ--HVRLFQVCLQCIKHWATQRGIYSKPIGY 213
Query: 58 LGGVNWALLVARVCQLYPNA---IPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVW 114
L G +W LL+ + N +M++SRFF +++QW W PVML G +
Sbjct: 214 LNGSSWTLLLVKAYMSIKNKELLSVTMILSRFFSMWSQWPWQMPVMLTDYIPGINGTKIE 273
Query: 115 DPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSA 174
D + MPI++P +P N + V+ ST R+M +F+ G + + A
Sbjct: 274 YNSLAEFDNA-VMPIVSPCHPVCNVAPYVTKSTRRIMQIEFERGWTLLNKNAHPFAIIDK 332
Query: 175 LFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHP 231
LF P + + YK+++ + + TW + ++ + IE D N +LQ P
Sbjct: 333 LFNPVNYTQRYKHFINIVTSSTTITSHDTWVRKMATQIPRYLELIESDPN-ILQAQP 388
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
L +D++ VRSLNG RV DQIL+ V + FR+ LR +K WA+RR +YSN+ GF GGV W
Sbjct: 105 LRGLDDKEVRSLNGTRVTDQILELVAQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAW 164
Query: 64 ALLVARVCQL 73
A+LVARVCQL
Sbjct: 165 AMLVARVCQL 174
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 64/96 (66%)
Query: 3 VLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVN 62
VL NVD + R L+G R QI++ VPN++ F+ LRCLK WA++RG+ ++ GF G++
Sbjct: 221 VLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIH 280
Query: 63 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNP 98
A+L A VC+ +PNA + L+S FF ++ W WP P
Sbjct: 281 LAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLP 316
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 35/237 (14%)
Query: 4 LNNVDEQTVRSLNGCRVADQILKHVPN--VEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
L +D +L G D ++ +P + FR LR +K WA RG+YSN GFLGG
Sbjct: 918 LKAMDSTAQLTLQGWLENDALVNAIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGF 977
Query: 62 NWALLVAR-VCQLYPNAIPS-----------MLVSRFFRVYTQWRWPNPVML-----CPI 104
+W++LVA + + P+ + L+ FF W WP P++L +
Sbjct: 978 SWSVLVAHFMVKTKPSPLGDEDQDSTGRPLLALMHAFFVHVANWPWPQPILLNMPLGATL 1037
Query: 105 EEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEE 164
D +G SV MP++TP +P NS+ VS+STL VM + Q G +
Sbjct: 1038 PADAIGESV-------------MPVMTPTWPTRNSARVVSVSTLSVMRAELQRGADLTAA 1084
Query: 165 IELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIER 221
+ + A A+ +P K L V + + +L GW+ SR L ++ER
Sbjct: 1085 ADCSLA---AVADPLGVSTLAKGILVVQLQCLNKSELERGAGWLLSRLGVLVHELER 1138
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 139/294 (47%), Gaps = 34/294 (11%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
Q++ LN R + + +P++ FR+ R +K WA+RRG+YS+ G+LGG++ LL+AR
Sbjct: 739 QSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLAR 798
Query: 70 VCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+C L ++ +++ FF+ Y Q+ W V+ P F PR R +
Sbjct: 799 ICTLSFRQAGTISAADIITTFFKHYAQFNWEKQVVYDP------SFYKSPPRYF-RPQRE 851
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL----F 181
+ I++ P +N + S+ + R + ++FQ +++ + ++ Q + E F
Sbjct: 852 PLVILSQHQPKVNVARAASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGSIENSTGADEF 911
Query: 182 FEAYKNYLQVDIV----AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
++Y++Y +V++ AA +L GW+E R L + I R + +P +
Sbjct: 912 LKSYRSYAKVNVQYWGGAATKGRMLV--GWLEWRCVSLLVDIHRKFPD-IHARIWPARFT 968
Query: 238 DPSKPCPNSA-----FFMGLRRKE--GVT-----GKERQQFDIRGTVDNFREEI 279
D + + + +GL R+ G T ++ Q + +++F E+I
Sbjct: 969 DMEEVGETTKEYQGCYLIGLTRESTPGATPLSDADRQSAQISLLAVLNSFAEQI 1022
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 29/267 (10%)
Query: 7 VDEQTVRSLNGCRVADQILKHV----PNVE----HFRMTLRCLKFWAKRRGVYSNVTGFL 58
+D++ ++S+NG R IL++V PN E F+ L+ +K WA+ G+Y N GFL
Sbjct: 1 MDQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFL 60
Query: 59 GGVNWALLVARVCQLYPNAIPSMLVSRFFRVY-TQWRWPNPVMLCPIEEDELGFSVWDPR 117
G++ A+++A++ QL+PN + ++ +FF+ + ++W W + +E+ + +
Sbjct: 61 SGISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKKMDVQLGSRSEEMKVQMQSQQ 120
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE 177
+ M IITPAYP N++ V + ++ + N + + W + E
Sbjct: 121 RKC------MHIITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQNQK--NIVWEKIVE 172
Query: 178 PYLFFEAYKNYLQVDIV---AADADDLLTWKGWVESRFRQL--TLK-IERDTNGLLQCHP 231
F YK ++++D++ + + K + R L LK IE D ++ P
Sbjct: 173 KENFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEK-IEVRP 231
Query: 232 YPNEY--IDPSKP-CPNSAFFMGLRRK 255
+P + DP P C +AF +GL+ K
Sbjct: 232 WPIFFDKKDPDYPYC--AAFLIGLKNK 256
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 23/246 (9%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++ QT+ L R AD + + VP++ FR+ R +K WAK RG+Y+ GFL G+ ++
Sbjct: 782 SLSAQTLSKLKAIRDADYLRRSVPDLTTFRLAHRFVKTWAKSRGIYAARFGFLSGIQISV 841
Query: 66 LVARVCQLYPN-----AIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
L+ARV +L P L+ FF Y + W + P+ + R+ P
Sbjct: 842 LLARVQKLLAREAGAPPTPEALIVTFFHHYAAFDWSAQLAFDPL---------FHRRRLP 892
Query: 121 RDRSHHMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
R+ P+ Y P +N++ S+ + + + +F+ + A WS+L
Sbjct: 893 YSRTAREPLAILGYFPPALNTALAASVPSTKTLAAEFRRASDALRSATDPPASWSSLLSV 952
Query: 179 YL----FFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F AYK+Y+++D+ + GW+ESR L + + R G L +
Sbjct: 953 SAGRDEFLAAYKSYVKLDVQYWGLSLSRGAQFLGWLESRCVMLLVDLHRRAPG-LHVRMW 1011
Query: 233 PNEYID 238
P +++
Sbjct: 1012 PARFVE 1017
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 44/225 (19%)
Query: 24 ILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP----NAIP 79
I + +P++ FR+ RC+K WA +RG+YS GFLGGV+ L+++ +C+ +A
Sbjct: 699 IQRTLPSLSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSASA 758
Query: 80 SMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR-DRSHHMPIITPAY--PC 136
+ LV+ FF Y Q+ W N E+ + V+ +K PR +RS P++ + P
Sbjct: 759 ADLVTSFFHHYGQFDWTN----------EMVYDVFFHKKRPRYNRSAREPMVVLGFHAPN 808
Query: 137 MNSSYNVSLSTLRVMTEQFQ-WGNRICEEIELNKAQWSALF----------EPYL----F 181
N ++ ++ L+ + ++F+ G R+CE+ W A F P L F
Sbjct: 809 SNIAHTSTVPGLQTLVKEFKAAGERLCEQ----GMTWDAFFGLGPTLSSVSSPSLGAAGF 864
Query: 182 FEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIER 221
E Y N+++VDI L+ GWVESR L ++I +
Sbjct: 865 LETYHNFVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK 906
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 5/80 (6%)
Query: 8 DEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 67
D + +RSLNGCRV D+IL VPN +FR TLR +K WAKRRG+YS LGG +WA+LV
Sbjct: 1 DIRCIRSLNGCRVTDEILHLVPN--NFRSTLRAIKLWAKRRGIYSTFR-ILGG-SWAMLV 56
Query: 68 ARVCQLYPNAIPSMLVSRFF 87
AR CQLY NAI S LV +F+
Sbjct: 57 ARTCQLY-NAIASTLVHKFY 75
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 47 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWR----WPNPVMLC 102
RR VY N+ + GV A++VAR+CQ+ P + P++L+ FF YTQW +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 103 PIEEDELGF----SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG 158
E WDPR++ R +P+I PAYP +N + NV +L V + +
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDA-CRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYA 120
Query: 159 NRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADD------LLTWKGWVESRF 212
R+ +E ++EPY + Y + V + + ++ L W +V S+
Sbjct: 121 YRLLSNLE---TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKL 177
Query: 213 RQLTLKIERDTNGLLQCHPYPNEYID-PSKPCPNSA-------FFMGLRRKEGVTGKERQ 264
R L +ER L+ PYP + D P + P S F +G++ K G ++
Sbjct: 178 RILLYALER----LVDARPYPQKLNDGPPRSVPKSGRFLKGSCFIVGIKEKVGRRFPQKN 233
Query: 265 QF 266
F
Sbjct: 234 LF 235
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 113/224 (50%), Gaps = 21/224 (9%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
Q++ LN R + + +P++ FR+ R +K WA+RRG+YS+ G+LGG++ LL+AR
Sbjct: 739 QSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLAR 798
Query: 70 VCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+C L ++ +++ FF+ Y Q+ W V+ P F PR R +
Sbjct: 799 ICTLSFRQAGTISAADIITTFFKHYAQFNWEKQVVYDP------SFYKSPPRYF-RPQRE 851
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL----F 181
+ I++ P +N + S+ + R + ++FQ +++ + ++ Q + E F
Sbjct: 852 PLVILSQHQPKVNVARAASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGSIENSTGADEF 911
Query: 182 FEAYKNYLQVDIV----AADADDLLTWKGWVESRFRQLTLKIER 221
++Y++Y +V++ AA +L GW+E R L + I R
Sbjct: 912 LKSYRSYAKVNVQYWGGAATKGRMLV--GWLEWRCVSLLVDIHR 953
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 30/243 (12%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
Q++ LN R + + + +P++ FR R +K WAK RG+YS+ G+LGG++ LL+AR
Sbjct: 745 QSLLKLNSHRDLEYLQRTIPDLATFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITLLLAR 804
Query: 70 VCQL----YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC+L S ++S FF Y + W N ++ E F P+ + R
Sbjct: 805 VCKLSFREAGATSVSDIISDFFFYYENFDWKNDMVY------ETTFYTGTPKYHRLSR-E 857
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP---YLFF 182
M I++ P +N ++ ++S++ + ++F+ ++ E+ A W + +P F
Sbjct: 858 PMVILSIHPPKVNVAHASTVSSVHTLEQEFKRAAQLISEV---GATWKNIADPSGVVQFL 914
Query: 183 EAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHP--YPNE 235
EAY +Y++VD+ AA L GW+E R L + I R G H +P
Sbjct: 915 EAYSSYIKVDVHYWAKAAAKGRALF---GWLEFRCVSLLVNINR---GFPDIHARIWPAR 968
Query: 236 YID 238
+ D
Sbjct: 969 FTD 971
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 42/306 (13%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V +T S+NG R +I + +P + F L+ +K WA +R VY N+ + G
Sbjct: 156 SFLLQVARETRHSVNGIRFTLEIKRRLPVTYDVFSTVLKVVKLWAMKRQVYGNLYTYPSG 215
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWR----WPNPVMLCPIEEDELGF----S 112
V A++VAR CQ+ P + P++++ FF YTQW +PV + +
Sbjct: 216 VVLAIMVARACQVMPASHPNVVLRFFFLFYTQWMSRHDRISPVYITTSLQGRGRVPGMPE 275
Query: 113 VWDPRKNPRDRSHH-MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ 171
WDP SH +P++ PAYP +N + V L V + + + E
Sbjct: 276 PWDPALE--KFSHDLLPVLNPAYPFVNDANAVGRCGLEVFYSEVTRAHHLLSTTE--SFP 331
Query: 172 WSALFEPYLFFEAYKNYLQVDIVAADA-------DDLLTWKGWVESRFRQLTLKIERDTN 224
+++PY + + ++L V V+ D +DL W +V S+ R L +E
Sbjct: 332 LEDVWKPYSITDDFSSFLLVQ-VSCDGNSEEGVENDLEVWSSYVASKLRILIYAVE---- 386
Query: 225 GLLQCHPYPNEYID--------PSKPCPNSAFFMGLRRKEGVTGKERQQFD---IRGTVD 273
++ PYP++ D P F +G+R + K+RQ+ +D
Sbjct: 387 CIVDARPYPHKLKDRVATSLLGPQHIRRGCVFLIGVRER-----KDRQKLHQSMFSSALD 441
Query: 274 NFREEI 279
FR +
Sbjct: 442 EFRYAV 447
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 44/225 (19%)
Query: 24 ILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP----NAIP 79
I + +P+ FR+ RC+K WA +RG+YS GFLGGV+ L+++ VC+ +A
Sbjct: 778 IQRTLPSPSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSASA 837
Query: 80 SMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR-DRSHHMPIITPAY--PC 136
+ LV+ FF Y Q+ W N ++ + V+ +K PR +RS P++ + P
Sbjct: 838 ADLVASFFHHYGQFDWTN----------DMVYDVFFHKKRPRYNRSTREPMVVLGFHTPN 887
Query: 137 MNSSYNVSLSTLRVMTEQFQWGN-RICEEIELNKAQWSALFEP--------------YLF 181
N ++ ++ L+++ ++F+ + R+CE W A F P F
Sbjct: 888 SNIAHTSTMPGLQILVKEFKAADKRLCEP----GMTWDAFFGPGSTLSPVSSPSLGAAGF 943
Query: 182 FEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIER 221
E Y+N+++VDI L+ GWVESR L ++I +
Sbjct: 944 LETYQNFVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK 985
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 30/242 (12%)
Query: 47 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWR----WPNPVMLC 102
RR VY N+ + GV A++VAR+CQ+ P + P++L+ FF YTQW +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 103 PIEEDELGF----SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG 158
E WDPR++ R +P+I PAYP +N + NV L V + +
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDA-CRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTYA 120
Query: 159 NRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADD------LLTWKGWVESRF 212
R+ +E ++EPY + Y + V + + ++ L W +V S+
Sbjct: 121 YRLLSNLE---TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKL 177
Query: 213 RQLTLKIERDTNGLLQCHPYPNEYID--------PSKPCPNSAFFMGLRRKEGVTGKERQ 264
R L +ER ++ PYP + D P + S F +G++ K G ++
Sbjct: 178 RILLYALER----IVDARPYPQKLNDVPPRSVPKPGRFLKGSCFIVGIKEKVGRRFPQKN 233
Query: 265 QF 266
F
Sbjct: 234 MF 235
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 30/237 (12%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
Q++ LN R + + +P++ FR+ R +K WA+RRG+YS+ G+LGG++ LL+AR
Sbjct: 739 QSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLAR 798
Query: 70 VCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+C L ++ +++ FF+ Y Q+ W V+ P F PR R +
Sbjct: 799 ICTLSFRQAGTISAADIITTFFKHYAQFNWEKQVVYDP------SFYKSPPRYF-RPQRE 851
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL----F 181
+ I++ P +N + S+ + R + ++FQ +++ + ++ Q + E F
Sbjct: 852 PLVILSQHQPKVNVARAASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGSIENSTGADEF 911
Query: 182 FEAYKNYLQVDIV----AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
++Y++Y +V++ AA +L GW+E +R ++L + R HP P
Sbjct: 912 LKSYRSYAKVNVQYWGGAATKGRMLV--GWLE--WRCVSLLVGR-------LHPLPT 957
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 47 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWR----WPNPVMLC 102
RR VY N+ + GV A++VARVCQ+ P + P++L+ FF Y QW +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61
Query: 103 PIEEDELGF----SVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG 158
E WDPR++ R +P+I PAYP +N + NVS L V + +
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDA-CRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTYA 120
Query: 159 NRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADD------LLTWKGWVESRF 212
+R+ E +++P+ + Y + V++ + + L W +V S+
Sbjct: 121 HRLLSNSE---TPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLSKL 177
Query: 213 RQLTLKIERDTNGLLQCHPYPNEYID-PSKPCPN-------SAFFMGLRRKEGVTGKERQ 264
R L +ER ++ PYP + D P + P S+F +G+R K G ++
Sbjct: 178 RILLYALER----IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRFPQKN 233
Query: 265 QF 266
F
Sbjct: 234 MF 235
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
+++ LN R + + +P++ FR R +K WA+RRGVYS G+LGG++ LL++
Sbjct: 710 RSLLKLNPLRDMHYLQRTIPDLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSS 769
Query: 70 VCQL-YPNAIP---SMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC+L + A P + ++ FFR Y Q++W ++ P GF PR R
Sbjct: 770 VCKLSFQKAGPLSAADMICTFFRHYAQFQWDRTIVYDP------GFYKTAPRYF-RTSRE 822
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL----- 180
+ I+T P +N + SL + R + ++F+ R+ ++ + W+ L
Sbjct: 823 PIVILTQNTPKVNVARAASLPSARTLEQEFK---RMDRQLASPEITWAGLLGAAGSSSGV 879
Query: 181 --FFEAYKNYLQVDI----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
F +Y +Y +V++ A LL GW+E R L + I+R L +P
Sbjct: 880 EDFLTSYPSYAKVNVQYWGAGAAKGRLLV--GWLEWRCVSLLVDIQRRFPD-LHARIWPA 936
Query: 235 EYIDPSKPCPNSA-----FFMGLRRKEG------VTGKERQQFD--IRGTVDNFREEI 279
+ D + + F +GL R + ++ +RQ + +R +D F E I
Sbjct: 937 RFTDMEEASESEGEYQGCFLIGLTRGDASKSTTPMSAVDRQSAETALRAVLDAFAESI 994
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 126/309 (40%), Gaps = 63/309 (20%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
VD+ T+RSLNG RV +LK P + +R+ LR +K WAK RG+YSNV G+ GGV WA+L
Sbjct: 217 VDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGGVTWAIL 276
Query: 67 VARVCQ---------LYPNAIPSMLVSRFFRVYTQ-WRWPNPV----------------- 99
V++V Q +A+ +L+ F T W NPV
Sbjct: 277 VSKVMQDNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTANDEILNGFVSAGSVE 336
Query: 100 MLCPIEEDELG------------FSVWDPRKNPRD------RSHHMPIITPAYPCMNSSY 141
M P D G + DP + P M ++TP P NSS+
Sbjct: 337 MYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCMVVLTPVLPTQNSSF 396
Query: 142 NVSLSTLRVMTEQFQWGNRICEEIELNKA----QWSALFEPYLFFEAYKNYLQVDI---- 193
N VM ++F+ + L+ + A+ F YK L V++
Sbjct: 397 NALDFNRYVMVQEFKRAAHMLSLFALSPQSCPFRLGAVCARVHPFRLYKRLLFVEVEIRP 456
Query: 194 -----VAADADDLLTWK--GWVESR---FRQLTLKIERDTNGLLQCHPYPNEYIDPSKPC 243
++ D LL + VES+ F +L+ + L+ +P+P +
Sbjct: 457 ENQRTLSNDDVHLLQKRIAAMVESKVRIFTKLSAAAFHEEGTYLRLYPHPQVTQPWTASG 516
Query: 244 PNSAFFMGL 252
AF +GL
Sbjct: 517 GGIAFLIGL 525
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 40/257 (15%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++ Q++ L R D + + VPN+ FR R ++ WAK RGVY++ GFL G+ A+
Sbjct: 761 DLSPQSLLKLKAVRDMDYLRRTVPNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAI 820
Query: 66 LVARVCQLYPN--------AIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPR 117
LVARV +L N + LV+ FF Y + W + P +
Sbjct: 821 LVARVAKLLANNPDVKTPITVEDFLVT-FFTHYASFPWSTHLAFDPF---------FHRN 870
Query: 118 KNPRDR-SHHMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSA 174
+ P +R PI Y P +N++ S S+ R + ++F+ + N W+
Sbjct: 871 RLPYNRVPFREPIAILGYFPPALNTAAAASPSSARTLADEFRRAGEAL--VSGNVTDWAF 928
Query: 175 LFEP---------YLFFEAYKNYLQVD-----IVAADADDLLTWKGWVESRFRQLTLKIE 220
F AYK Y+++D + + L GW+ESR L + I
Sbjct: 929 FLSGTGSNGTTGVQEFLSAYKTYIRLDASYWGLSRSRGSQFL---GWLESRLVSLLVDIS 985
Query: 221 RDTNGLLQCHPYPNEYI 237
R TNG+L +P ++
Sbjct: 986 RRTNGVLHARIWPARFV 1002
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 28/220 (12%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
+ Q + L R D I + +P++ FR R + WAKRRG+Y G+LGG++ ++
Sbjct: 767 LSSQALTKLQAFRDVDYIRRSIPDLAAFRAAHRFITLWAKRRGIYLARFGYLGGIHITMM 826
Query: 67 VARVCQL---YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
++RVC+L A ++ RFF+ YT + W ++ P F PR R
Sbjct: 827 LSRVCKLSCRKGGATSMDMICRFFKYYTNFDWEREILCDP------SFFKDAPRYR-RYA 879
Query: 124 SHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL--- 180
+ M I+T P +N + + S ++ R + ++ Q R+ E I WS L
Sbjct: 880 NEPMVILTIHTPLVNIARSASKASTRTIIKELQ---RMDELISTPDMSWSGLVGNITASD 936
Query: 181 ----FFEAYKNYLQVDI-----VAADADDLLTWKGWVESR 211
F + Y +Y+++ + + A LL GW+ESR
Sbjct: 937 SSQEFLKTYTSYIKIHVQYWGMILAKGSTLL---GWLESR 973
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 55/301 (18%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
++ L R + I + VP++ FR+ RC+ WAK GVY++ G LGG++ ++++R
Sbjct: 751 HSLSKLQPYRDQEYIKRMVPDMNVFRLAHRCITQWAKSSGVYTSKFGLLGGIHITMMLSR 810
Query: 70 VCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+ QL + + LV+ FF Y + W N +++ P + S+ +P
Sbjct: 811 LHQLLHGKVGRVTIPELVAMFFHHYAHFDWKNSMVVSPGVQSRYRRSMREP--------- 861
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE-------- 177
M I+T P +N + V+ +LR + F+ + E N A+WS +
Sbjct: 862 -MVILTVHVPTVNVARAVTAHSLRTIASAFKRAEELLAE---NGARWSNILRDTSISHNK 917
Query: 178 ---PYLFFEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQC 229
F A+ +Y++V++ A L+ GW+ESRF +L ++R G+
Sbjct: 918 ETGAEKFLGAHNSYIKVNVQYWGPSPTQASSLV---GWIESRFFRLLNDLDRQVPGVY-G 973
Query: 230 HPYPNEYIDPSKPCPNS----------AFFMGLRR-----KEGVTGKERQQFDIRGTVDN 274
+P + SK P+S + +GL R G +ER Q + T+
Sbjct: 974 RIWPARFT--SKDSPDSPDDGETEYQGCYLVGLERLADAVNTGADKEERLQ-TLHATITR 1030
Query: 275 F 275
F
Sbjct: 1031 F 1031
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 74 YPNAIPSMLVSRFFRVYTQWRWPNP---------VMLCPIE--EDELGFSVWDPRKNPRD 122
+PN + +V RFFR+Y W PNP + L + LG WDPR++ D
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRG-WDPRESKSD 63
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQ----------- 171
P++TPA P N+ +NV+L+ LR + +F G+ IC + A+
Sbjct: 64 AMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGI 123
Query: 172 WSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQL 215
WS L EP FF +K YL V + DA+ + VES+ R L
Sbjct: 124 WSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 167
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 36/237 (15%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
++ L R + I + VP++ FR+ RC+ WAK GVYS+ G LGG++ +++ R
Sbjct: 750 HSLSKLQPYRDQEYIKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLCR 809
Query: 70 VCQL----YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+ QL + LV+ FF Y + W N +++ P + S+ +P
Sbjct: 810 LHQLIHEKFGRVTVPELVAMFFHHYAHFDWKNNMVVSPGVQTRYRRSLREP--------- 860
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY------ 179
M I+T P +N + V+ +LR + F+ + E + A+WS +
Sbjct: 861 -MVILTVHAPTINVARAVTTPSLRTIVSAFKRAEELMGE---DGAKWSNILNDISISHNN 916
Query: 180 -----LFFEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGL 226
F AYK+Y++V++ A L+ GW+ESRF +L ++R G+
Sbjct: 917 QTGAEKFLAAYKSYIKVNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQVLGI 970
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 48/60 (80%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
++L N+D ++VRSLNGCRV D+IL VPN+E+FR+ LR +K WAK+ G+YSN G+ GGV
Sbjct: 196 NLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 30/234 (12%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
++ L R + + + VP++ FR+ RC+ WAK GVYS+ G LGG++ ++++R
Sbjct: 747 HSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSR 806
Query: 70 VCQL----YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+ QL + LV+ FF Y + W N +++ P S+ +P
Sbjct: 807 LHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVVSPGVHTRYRRSLREP--------- 857
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY------ 179
M I+T P +N + V+ +LR + F+ R E I + A+WS +
Sbjct: 858 -MVILTAHVPTVNVARAVTAPSLRTIVSAFK---RAEELIGEDGAKWSNILNDISISQNN 913
Query: 180 -----LFFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGL 226
F AY +Y++V++ + GW+ESRF +L + R G+
Sbjct: 914 QTGAEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQGI 967
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 19/221 (8%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
Q++ LN R + + + +P++ FR R +K WAK RG+YS+ G+LGG++ LL+A
Sbjct: 745 QSLLKLNAVRDLEYLQRTIPDLATFRKAYRFIKAWAKCRGIYSSKLGYLGGIHITLLLAL 804
Query: 70 VCQL----YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC+L S ++ FF Y + W N ++ D ++V +P+ + R
Sbjct: 805 VCKLSFRESGATHESDILCTFFSYYAHFDWKNDLVY-----DTTYYTV-EPKYH-RSSRE 857
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAY 185
+ I++ P +N ++ ++ +++ + E+F NR+ + ++ + Y F AY
Sbjct: 858 PLVILSIHPPKVNVAHASTVPSVKTLEEEFDRANRLISKAGVSWEDIAGQTGIYQFLNAY 917
Query: 186 KNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIER 221
+Y++VD+ A L GW+E R L + I R
Sbjct: 918 PSYIKVDVQYWAKAVAKGRALF---GWLEFRCVSLLVDINR 955
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 30/234 (12%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
++ L R + + + VP++ FR+ RC+ WAK GVYS+ G LGG++ ++++R
Sbjct: 747 HSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSR 806
Query: 70 VCQL----YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+ QL + LV+ FF Y + W N +++ P S+ +P
Sbjct: 807 LHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVVSPGVHTRYRRSLREP--------- 857
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY------ 179
M I+T P +N + V+ +LR + F+ R E I + A+WS +
Sbjct: 858 -MVILTAHVPTVNVARAVTAPSLRTIVSAFK---RAEELIGEDGAKWSNILNDISISQNN 913
Query: 180 -----LFFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGL 226
F AY +Y++V++ + GW+ESRF +L + R G+
Sbjct: 914 QTGAEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQGI 967
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 36/237 (15%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
++ L R + I + VP++ FR+ RC+ WAK GVYS+ G LGG++ ++++R
Sbjct: 750 HSLSELQPYRDQEYIKRMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSR 809
Query: 70 VCQLY----PNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+ QL LV+ FF Y + W N +++ P + S+ +P
Sbjct: 810 LHQLIHEKCGRVTAPELVAMFFHHYAHFDWKNNMVVSPGVQTRYRRSLREP--------- 860
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY------ 179
M I+T P +N + V+ +LR + F+ + E + A+WS +
Sbjct: 861 -MVILTVHVPTINVARAVTAPSLRTIVSAFKRAEELMGE---DGARWSNILNDISISHNN 916
Query: 180 -----LFFEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGL 226
F AY +Y++V++ A L+ GW+ESRF +L ++R G+
Sbjct: 917 QTGAEKFLAAYNSYIKVNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQVLGI 970
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 77/282 (27%)
Query: 59 GGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML------CPIEEDELGFS 112
GGV++A+LVA++CQ + ++ +FF VY W+W +PV + + D
Sbjct: 268 GGVSYAILVAKICQDNTDLYLCDIIYKFFEVYADWKWFDPVFIRVGKKKDKTKLDLNKLQ 327
Query: 113 VWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEI------- 165
V D MPI+TP NS+Y V T + ++F G + +E+
Sbjct: 328 VLDAYS-----QDIMPILTPNTNPKNSAYRVCSHTFDTICKEFTRGKNLMKELIPQSQKT 382
Query: 166 ------------------------------------------ELNKAQWSALFEPYLFFE 183
+ K W LF+ + FF+
Sbjct: 383 IKPHPAALAKLALDQEETKLTVDALQIQESNQESQVQSPVQKQKQKQSWIKLFQKFRFFD 442
Query: 184 AYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY-IDPSKP 242
Y+++L++DI++ D L W G+VES+ R+L +++ +D + YP + + ++
Sbjct: 443 QYEHFLKIDILSTDESAHLKWLGYVESQLRRL-MQLLQDIEQISGLRIYPRSFNREETQD 501
Query: 243 CPNSAF------FMGLRRKE---GVTGKERQQFDIRGTVDNF 275
N+AF F+G++ E GVT +R V NF
Sbjct: 502 TINNAFKCCDSYFIGIKFNEAGPGVT------VSLRDQVTNF 537
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 51/316 (16%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM---- 81
+ VPN FR+ R +K WAK RG+YS+ G+LGG++ +++++V +L P+ P+
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATSAAD 857
Query: 82 LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSY 141
++ FF Y + W VM P F PR + R M I+T P MN +
Sbjct: 858 ILCTFFNYYGNFNWKEDVMYDP------SFHKKPPRYH-RTPQEGMVILTLHAPVMNVAR 910
Query: 142 NVSLSTLRVMTEQFQWGNRICEE----------IELNKAQWSALFEPYLFFEAYKNYLQV 191
+ S+ + R + ++ + + + E I N + S F +Y +Y+++
Sbjct: 911 SASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSYNSYIKI 970
Query: 192 DI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI-----DPSK 241
++ A L+ GW+ESR L + R +Q +P + D S
Sbjct: 971 NVQYWGLSLAKGSSLV---GWLESRCLVLLADLHRKFPD-IQTRIWPARFTQIEDHDDST 1026
Query: 242 PCP-----NSAFFMGLRRKEGVTGKER---------QQFDIRGTVDNFREEIGMY--MFW 285
P + +GL + E T R ++ ++D F I Y F
Sbjct: 1027 PAQEEREYQGCYLIGLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHNYKKYFD 1086
Query: 286 KPGMDIYVSHVRRRQL 301
+ VSHV++ L
Sbjct: 1087 SASAWVDVSHVKQGNL 1102
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 30/221 (13%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM---- 81
+ +P++ FR+ R +K WA+RRG+YS+ G+LGG++ LL+AR+C L ++
Sbjct: 6 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65
Query: 82 LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSY 141
+++ FF+ Y Q+ W V+ P F PR R + + I++ P +N +
Sbjct: 66 IITTFFKHYAQFNWEKQVVYDP------SFYKSPPRYF-RPQREPLVILSQHQPKVNVAR 118
Query: 142 NVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL----FFEAYKNYLQVDIV--- 194
S+ + R + ++FQ +++ + ++ Q + E F ++Y++Y +V++
Sbjct: 119 AASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWG 178
Query: 195 -AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPN 234
AA +L GW+E +R ++L + R HP P
Sbjct: 179 GAATKGRMLV--GWLE--WRCVSLLVGR-------LHPLPT 208
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 39/42 (92%)
Query: 218 KIERDTNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEGVT 259
+IERDTNG+LQCHPYPNEYID SK CP+ AFFMGL+RKEGVT
Sbjct: 5 QIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGVT 46
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 39/237 (16%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R D + + +P++ FR+ R +K WA+ RG+YS G+LGG+ ++L+AR
Sbjct: 768 QTLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLAR 827
Query: 70 VCQLYPN------AIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
VC+L ++P +L S FF Y + W N + P +L + R
Sbjct: 828 VCKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNYL----------R 876
Query: 124 SHHMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL- 180
S P+ + P +N++ ++ +++ + + N + E + W F
Sbjct: 877 SAREPLAILGFFPPALNTTLAATVPSMKAIARELSQANELLNE---DGMTWDTFFGASSA 933
Query: 181 --------------FFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIER 221
F +YK+++++++ + GW+ESR L + + R
Sbjct: 934 GGDKTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 36/260 (13%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
Q + L R + + +P++ +RM +K WA+ RG+YS GFLGG++ ++L+
Sbjct: 749 QALAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVP 808
Query: 70 VCQ--LYPN--AIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC+ Y N P+ +V FF Y+++ W N ++ P EL + +R+
Sbjct: 809 VCKAVAYENETVTPADIVVTFFHYYSEFDWKNSMVFDPFFHKELRY----------NRTF 858
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQ------------WGNRICEEIE--LNK 169
P+ + P +N++ S+ T+ ++ +F WG + E E L
Sbjct: 859 REPLCLIGWHAPALNTAPIASIPTVATISSEFGRAKRMLSDDDCIWGKLLGIEPETALGS 918
Query: 170 AQWSALFEPYLFFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL 227
Q A E F A+K Y+++D + + GW+ESR L + I R LL
Sbjct: 919 VQAPAATE---FLHAFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKHLL 975
Query: 228 QCHPYPNEYIDPSKPCPNSA 247
+P+ ++D S S
Sbjct: 976 -ARIWPSRFLDVSAGAETSG 994
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 45/232 (19%)
Query: 34 FRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA--------------RVCQ------- 72
F LR ++ WAK R ++ N GFLG +WALL A R+
Sbjct: 754 FTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDITPDSPRLLHSQENDGF 813
Query: 73 ----------LYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
L + + +L++ FF++ +Q W P+ L E G ++ P
Sbjct: 814 VGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPIALT-----EGG------KQYPVR 862
Query: 123 RSHH-MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLF 181
+S P+IT PC NS+ NV+ ST ++ + G I EE+ W+ LFE
Sbjct: 863 KSREWFPVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAEEVLAGNTAWTTLFESADL 922
Query: 182 FEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP 233
E +L + + +A+ +L GW+E L + +E+ N + P P
Sbjct: 923 PEQSNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQKLN--IHVRPRP 972
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 36/237 (15%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
++ L R + I + VP++ FR+ RC+ AK GVYS+ G LGG++ +++++
Sbjct: 750 HSLSKLQPYRDQEYIKRMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQ 809
Query: 70 VCQL----YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+ QL + LVS FF Y + W N +++ P + S+ +P
Sbjct: 810 LHQLVHEKFGRVTVPELVSMFFHYYAHFDWKNNMVVSPGVQTRYRRSLREP--------- 860
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY------ 179
M I+T P +N + V+ +LR + F NR E + + A+WS +
Sbjct: 861 -MVILTVHVPTINVARAVTAPSLRTIVSAF---NRAEELMGEDGARWSNILNDISISHNN 916
Query: 180 -----LFFEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGL 226
F AY +Y++V++ A L+ GW+ESRF +L ++R G+
Sbjct: 917 QTGAEKFLTAYNSYIKVNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQALGI 970
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R + + +P++ +RM +K WA+ RG+YS GFLGG++ ++L+A
Sbjct: 745 QTLAKLKPVRDLFYLRRSIPDMVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAP 804
Query: 70 VCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+C++ N ++ ++ FF+ Y ++ W ++ P +L + +R+
Sbjct: 805 LCKMLANDGATVSTADIIFTFFQHYARFSWKTALVFDPFFHKDLRY----------NRTF 854
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF--EP--- 178
P+ + P +N++ N S+ T+ + +F+ R+ + + WS L EP
Sbjct: 855 REPLCLLGWHAPALNTAVNASVPTVDAIAAEFERAERL---LSVENFSWSNLLGVEPDSP 911
Query: 179 ---------YLFFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL 227
F + YK+Y+++D + + GW+ESR L + ++R +
Sbjct: 912 PSSLSGPGATEFLQNYKSYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDRKVKN-I 970
Query: 228 QCHPYPNEYIDPSKPCPNSA------FFMGLRRKEGVTGKERQQFDIRGT 271
+P ++D + + +GL R G+E + D + T
Sbjct: 971 HARIWPARFLDMASSVEGPGTEYHGHYLIGLSRN----GEEPNKDDAKAT 1016
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 38 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPS 80
LRC+K WAK RGVYSNV GFLGG+ WA+LVARVCQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSPA 44
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 1266
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 40/267 (14%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIP----SM 81
+ VPN FR+ R +K WAK RG+YS+ G+LGG++ +++++V +L P+ P +
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTSAAD 857
Query: 82 LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSY 141
++ FF Y + W VM P F PR + R M I+T P MN +
Sbjct: 858 ILCTFFNYYGNFNWKEDVMYDP------SFHKKPPRYH-RTPQEGMVILTLHAPVMNVAR 910
Query: 142 NVSLSTLRVMTEQFQWGNRICEE----------IELNKAQWSALFEPYLFFEAYKNYLQV 191
+ S+ + R + ++ + + + E I N + S F +Y +Y+++
Sbjct: 911 SASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSYNSYIKI 970
Query: 192 DI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI-----DPSK 241
++ A L+ GW+ESR L + R +Q +P + D S
Sbjct: 971 NVQYWGLSLAKGSSLV---GWLESRCLVLLADLHRKFPD-IQTRIWPARFTQIEDHDDST 1026
Query: 242 PCP-----NSAFFMGLRRKEGVTGKER 263
P + +GL + E T R
Sbjct: 1027 PAQEEREYQGCYLIGLTKAEHATDPTR 1053
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 264 QQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQA 323
+QFDIR TVD FR + MY WKPGM+I VSH++RR +PSFVFP G + PR ++ + A
Sbjct: 2 EQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTK-MSGTA 60
Query: 324 GKP 326
G+P
Sbjct: 61 GRP 63
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 38 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPS 80
LRC+K WAK RGVYSNV GFLGG+ WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 44
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 39/270 (14%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R I + VP++ FR+ + +K WAK G+Y+ G+LGGV+ ++++ R
Sbjct: 735 QTLLKLKPARDMYYIARSVPDLAQFRVCYQVIKTWAKANGIYAAKFGYLGGVHLSVMLVR 794
Query: 70 VCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC++ + + ++ +++ FF Y + W N ++ P +L + + PR+
Sbjct: 795 VCKMLLHGMGTVSTADVIATFFDHYAHFDWKNDIVFDPFFHKQLRY-----HRTPREA-- 847
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQW-SALFEPYL---- 180
M ++ P +N++ S+ T+++++ + + N E A W S L P +
Sbjct: 848 -MCLLGWHSPTLNTALIASVPTVKIISTELRQANAKFTE----GATWQSILSAPGMIAEK 902
Query: 181 --------FFEAYKNY--LQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
F ++K + L++ + GW+ESR L + I R L
Sbjct: 903 DLSQGAASFLSSFKTFVNLRIHYWGGSLERGSRLVGWLESRCASLLVDINRKVPE-LAPR 961
Query: 231 PYPNEYIDPSKP---CPNS----AFFMGLR 253
+P ++D + P C S ++ +GL+
Sbjct: 962 IWPARFVDAATPNSQCQQSEYQGSYLVGLK 991
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 44/217 (20%)
Query: 8 DEQTVRSLNGCRVADQILKHVP----NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
D Q+ S+N + +I V N E F + L+ +K WA+RR VY G+LGG+ +
Sbjct: 461 DNQSEVSINAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQYGYLGGIAF 520
Query: 64 ALLVARVCQLYPNAIPSM----------------LVSRFFRVYTQWRWPNPVMLCPIEED 107
A+L A + Q Y N M + +FF+ Y+ W WPNP++L D
Sbjct: 521 AILCANIVQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPIILDQGFYD 580
Query: 108 ELGF-------------SVWDPRKNPRDRSHHMPIITP--------AYPCMNSSYNVSLS 146
+ +W+P D H MPII+P N++ V S
Sbjct: 581 QENLLNPNGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQKTITSTNTADQVLNS 640
Query: 147 TLRVMTEQFQWGNRICEEIELNKAQWSAL---FEPYL 180
L++ +F+ +I ++I K + L FE ++
Sbjct: 641 NLQIYLYEFKRAYKIMKKIYKGKIKLKELGSAFESFI 677
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 40/285 (14%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++ Q + L R D I + +P++ FR R + WAK RGVY + G+LGG++ +
Sbjct: 775 DLSYQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITM 834
Query: 66 LVARVCQLYPNAI---PSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
+++RV +L+ + + ++ RFF+ Y + W + + P F PR R
Sbjct: 835 MLSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVFDPF------FFESTPRYR-RY 887
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL-- 180
+ M I+T P +N + + + R + E+ + R+ + + WS L +
Sbjct: 888 ANEPMVILTINVPLINVA-RATAGSARTIVEELR---RMAQLMSDPDMTWSKLLNSTVST 943
Query: 181 ------FFEAYKNYLQV-----DIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQC 229
F AY +Y+++ I A LL GW+ESR +L I+R +
Sbjct: 944 LEPSEEFLTAYSSYIKIHVQYWGISLAKGKTLL---GWLESRCVRLLNDIDRKLPSIY-A 999
Query: 230 HPYPNEYIDPSKPCPNS----AFFMGLRRK-----EGVTGKERQQ 265
+P + +S + +GL ++ E +T +ER+Q
Sbjct: 1000 RMWPARFSSKDAMSDDSEYQGCYLIGLTKRETEGTEAMTKEERKQ 1044
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 40/326 (12%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R + P++ F+M R L WA+ RG+Y+ G+L G + +L++ R
Sbjct: 687 QTLSKLKAIRDLAHLQNTTPDLPAFQMAYRLLVVWARSRGIYAARFGYLSGTHISLMLDR 746
Query: 70 VCQLYPNA----IPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+ +L ++ + LV FFR Y ++ W + P+ G P R
Sbjct: 747 IAKLLYHSNRDVTAADLVCAFFRYYAEFDWSKNTVEDPLARAIPGMG------RPYQRHA 800
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEI--ELNKAQWSALF----- 176
P++ Y P +N + ++ + V+TE+ Q + + + + + W+ +
Sbjct: 801 SEPMVVLGYHIPRVNIARAATVPAVGVLTEELQRAHALVTKQPEQGSTPTWAEIIGEERN 860
Query: 177 EPYLFFEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHP 231
F AY++Y++VD+ + L+ GWVESR L + + R +
Sbjct: 861 SAAEFLSAYRSYIRVDVQYWGTSSVKGRQLI---GWVESRCPTLLIDLNRKIPE-IHARM 916
Query: 232 YPNEYIDPS---KPCPNSAFFMGLRRKEGVTGKERQQFD-------IRGTVDNFREEI-G 280
+P + + K + + +GL +++ + + D + G ++ F ++I G
Sbjct: 917 WPLRFARGASNEKGDQHGCYLVGLAKRQDSDSDSKTEADRKLAQSKLDGVLERFSDQIRG 976
Query: 281 MYMFWKPGMD-IYVSHVRRRQLPSFV 305
F+ P + VSHV R +L +
Sbjct: 977 NEKFFDPTSGWVEVSHVSRAKLEELI 1002
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1263
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 40/256 (15%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R D + + +P++ FR+ R ++ WA+ RG+YS G+LGG+ ++L+AR
Sbjct: 776 QTLGKLKAARDLDYLRRSLPDLAKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLAR 835
Query: 70 VCQ-LYPNAIPSMLVS----RFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRS 124
VC+ L +A P + V+ FF Y + W + P + +K R+
Sbjct: 836 VCKSLARDAGPGLSVADILVTFFHHYAAFDWQQNLAFDPFFHN---------KKLSYHRT 886
Query: 125 HHMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE----- 177
P+ + P +N+S+ ++ ++R M +F+ R + W A F
Sbjct: 887 FREPLAILGFFPPMLNTSHAATIPSVRAMAGEFR---RAAALLASEDVTWDAFFRGGGPT 943
Query: 178 -------------PYLFFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERD 222
F +YK+++++++ + GW ESR + + + R
Sbjct: 944 TVPGPLSATLPSGAADFLASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLILVDVSRR 1003
Query: 223 TNGLLQCHPYPNEYID 238
+L +P ++D
Sbjct: 1004 LPNVL-ARMWPERFVD 1018
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 12 VRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 71
++SLN R + +L+ +PN+ FR+ R +K WA GV+S+ G+LGG + LL+AR+C
Sbjct: 787 LKSLNSYRDTEFLLRTIPNINVFRLAHRFIKIWALASGVFSSRFGYLGGFHITLLLARIC 846
Query: 72 QLY----PNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHM 127
+L + + +V FF Y++ W ++ P E G S + P M
Sbjct: 847 KLADGDPKDVTAAKIVRLFFAYYSKTEWLTEIICDP--EFSAGASYQRFSREP------M 898
Query: 128 PIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWS--ALFEPYLFFEAY 185
+ + P +N + N + ++ +T +F+ E L+ +W ++ F Y
Sbjct: 899 AVTSIYAPVVNVARNATRHSVSALTREFE-----LAEKALDSGRWDLRSMGRENEFLAEY 953
Query: 186 KNYLQVDI 193
++Y+++D+
Sbjct: 954 ESYVKIDV 961
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 146/328 (44%), Gaps = 44/328 (13%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++ Q + L R D I + +P++ FR R + WAK RGVY + G+LGG++ +
Sbjct: 775 DLSYQALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITM 834
Query: 66 LVARVCQLYPNAI---PSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
+++RV +L+ + + ++ RFF+ Y + W + + P F PR R
Sbjct: 835 MLSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHETVFDPF------FFESTPRYR-RY 887
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL-- 180
+ M I+T P +N + + + R + E+ + R+ + + WS L +
Sbjct: 888 ANEPMVILTINVPLINVA-RATAGSARTIVEELR---RMAQLMSDPDMTWSKLLNSTVST 943
Query: 181 ------FFEAYKNYLQV-----DIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQC 229
F AY +Y+++ I A LL GW+ESR +L I+R +
Sbjct: 944 LEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLL---GWLESRCVRLLNDIDRKLPSIY-A 999
Query: 230 HPYPNEYIDPSKPCPNS----AFFMGL-----RRKEGVTGKERQQ-FDIRGTV-DNFREE 278
+P + +S + +GL R E +T +ER+Q D+ V + F+ +
Sbjct: 1000 RIWPARFSSKDAMSDDSEYQGCYLIGLTKRETERTEAMTKEERKQSLDLMTRVLEKFKTQ 1059
Query: 279 IG-MYMFWKPGMD-IYVSHVRRRQLPSF 304
I ++ P + V+HV++ +L +
Sbjct: 1060 IQEETKYFDPTTAWLDVTHVKQSELDAL 1087
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++ Q + L R D I + +P++ FR R + WAK RGVY + G+LGG++ +
Sbjct: 775 DLSYQALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITM 834
Query: 66 LVARVCQLYPNAI---PSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRD 122
+++RV +L+ + + ++ RFF+ Y + W + + P F PR R
Sbjct: 835 MLSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHETVFDPF------FFESTPRYR-RY 887
Query: 123 RSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL-- 180
+ M I+T P +N + + + R + E+ + R+ + + WS L +
Sbjct: 888 ANEPMVILTINVPLINVA-RATAGSARTIVEELR---RMAQLMSDPDMTWSKLLNSTVST 943
Query: 181 ------FFEAYKNYLQV-----DIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQC 229
F AY +Y+++ I A LL GW+ESR +L I+R +
Sbjct: 944 LEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLL---GWLESRCVRLLNDIDRKLPSIY-A 999
Query: 230 HPYPNEYIDPSKPCPNS----AFFMGL-----RRKEGVTGKERQQ 265
+P + +S + +GL R E +T +ER+Q
Sbjct: 1000 RIWPARFSSKDAMSDDSEYQGCYLIGLTKRETERTEAMTKEERKQ 1044
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYK 186
MPIITPAYP NS+YNVS+ST VM E+F+ G I +EI L+KA+WS LFE FF+ YK
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 42/286 (14%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R +L+ +P++ FR+ +K WA RG+Y G LGG++ +L+
Sbjct: 752 QTLAKLKPARDMYYLLRSIPDLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLVP 811
Query: 70 VCQ----LYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+C+ L + +++ FF YT + W V+L P EL + R+
Sbjct: 812 ICKQLATLSRVVSTTGILATFFSHYTNFDWEKQVVLDPFFHKELRYH----------RTS 861
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL--- 180
P + P +N++ S T++ + + N + + + W A+ P
Sbjct: 862 REPFCLLGWHAPALNTAMTASTPTVKSIATEISKTNSLLSQPGVT---WDAILGPVGAAV 918
Query: 181 -----FFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP 233
F +K+Y++VD + + GW+ESR + + + R LL +P
Sbjct: 919 AGVQDFLRGFKSYVKVDARFWGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLP-RIWP 977
Query: 234 NEYIDPSKPCPNSA--------FFMGLRRKEGVTGKERQQFDIRGT 271
+ID P +A + +GL +G +R + D + T
Sbjct: 978 GRFID--APVTETATNSEYQGFYLIGLAWNDG--DSDRAKEDTKAT 1019
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
2509]
Length = 1330
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + VP++ FR R ++ WAK RGVY+ G+LGG+ ++++ARV
Sbjct: 855 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 914
Query: 71 CQLYP-------NAIPSMLVSRFFRVYTQWRWPNPVM---LCPI--EEDELGFSVWDPRK 118
+ LV+ FF Y Q+ W ++ +CP ++ E G ++
Sbjct: 915 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQKREKGGEKEVYKR 974
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE- 177
R+ M ++ P +N+S S+ ++R + E+F+ + + E+ W +
Sbjct: 975 TGRE---AMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDLLVKGEVKS--WKEFLKG 1029
Query: 178 --PYLFFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP 233
F YK+Y++VD+ + + GW+ESR L + + R G+ +P
Sbjct: 1030 SGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPGVY-VRMWP 1088
Query: 234 NEYID 238
+++
Sbjct: 1089 GRFVE 1093
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + VP++ FR R ++ WAK RGVY+ G+LGG+ ++++ARV
Sbjct: 854 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 913
Query: 71 CQLYP-------NAIPSMLVSRFFRVYTQWRWPNPVM---LCPI--EEDELGFSVWDPRK 118
+ LV+ FF Y Q+ W ++ +CP ++ E G ++
Sbjct: 914 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQKREKGGEKEVYKR 973
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE- 177
R+ M ++ P +N+S S+ ++R + E+F+ + + E+ W +
Sbjct: 974 TGRE---AMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDLLVKGEVKS--WKEFLKG 1028
Query: 178 --PYLFFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP 233
F YK+Y++VD+ + + GW+ESR L + + R G+ +P
Sbjct: 1029 SGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPGVY-VRMWP 1087
Query: 234 NEYID 238
+++
Sbjct: 1088 GRFVE 1092
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM--LV 83
+ + N FR+ R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S ++
Sbjct: 759 RTIRNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADIL 818
Query: 84 SRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNV 143
FF Y + W + PI ++ P +N R M I T P +N + +
Sbjct: 819 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 871
Query: 144 SLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY-------------LFFEAYKNYLQ 190
S+ ++R + ++ + + E A W+ L Y F ++Y +Y++
Sbjct: 872 SIPSMRKIVDEMKRAENLISE---GNANWAELLGVYPKPGKSALSSSADEFLKSYNSYIK 928
Query: 191 VDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-----NEYIDPS 240
+++ A L+ GWVESR L + R+ +Q +P NE + S
Sbjct: 929 INVQYWSLSLAKGSSLV---GWVESRCLDLLNDLYREFPD-IQARIWPARFTQNEEHENS 984
Query: 241 KPCP-----NSAFFMGLRRKEGVTGKER--QQFD 267
P + +GLR+ + T R +FD
Sbjct: 985 TPAQEEHEYQGCYLVGLRKADHATDPTRTFSKFD 1018
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 19/243 (7%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + VP++ FR R ++ WAK RGVY+ G+LGG+ ++++ARV
Sbjct: 826 TLTKLKAARDLDYLRRTVPDLAVFRTAHRAVRSWAKARGVYAQRFGYLGGIQISVMLARV 885
Query: 71 ------CQLYPNAIPSMLVSRFFRVYTQWRWPNPVM---LCPI--EEDELGFSVWDPRKN 119
Q LV+ FF Y ++ W ++ +CP ++ E G R+
Sbjct: 886 YKALALTQGVTRVGVEELVASFFEEYARFHWGRDMVYDEVCPWFRQKREKGGEKEVYRRT 945
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWG--NRICEEIELNKAQWSALFE 177
R+ M ++ P +N+S S+ ++R + E+F+ + EE+ K
Sbjct: 946 SRE---AMVVLGWFGPGLNTSGQASVWSVRTLKEEFERARDQLVKEEVRSWKEFLEGSSA 1002
Query: 178 PYLFFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNE 235
F YK+Y++VD+ + GW+ESR L + + R G+ +P
Sbjct: 1003 AEEFLTGYKSYVKVDVQYWGLSPSRGAQFVGWLESRLVMLLVDLHRRAPGVY-VRMWPAR 1061
Query: 236 YID 238
+++
Sbjct: 1062 FVE 1064
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 1198
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 116/252 (46%), Gaps = 31/252 (12%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R + + +P++ FR++ + +K WAK RG+Y+ G+LGG++ ++++ +
Sbjct: 737 QTLLKLKPARDLFYLQRSIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVK 796
Query: 70 VCQ--LYPNAIPSM--LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC+ L + S +++ FF Y+++ W N V+ P L + + PR+
Sbjct: 797 VCKMLLRVGGVVSAVDIITTFFDHYSRFDWQNDVVFDPFFHKNLRY-----HRTPRE--- 848
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF--------- 176
M ++ P +N++ S+ T+++++ + ++ + A W +L
Sbjct: 849 AMCLLGWHSPTLNTALIASVPTVKIISAEL---CHAATQLSGDGASWQSLLSIPDSSQDR 905
Query: 177 ----EPYLFFEAYKNY--LQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
F +Y+++ L++ A + GW+ESR L + I R L
Sbjct: 906 NMTPSASKFLGSYRSFVNLRIHYWGASLERGSRLVGWLESRCASLLVDINRRVPE-LSAR 964
Query: 231 PYPNEYIDPSKP 242
+P ++D P
Sbjct: 965 IWPARFVDSLTP 976
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
++ L R + I + VP++ F++ RC+ WAK GVYS+ G LGG++ ++++R+
Sbjct: 751 SLSKLQPFRDQEYIKRMVPDMYVFQLAHRCITLWAKTSGVYSSKFGLLGGIHITMMLSRL 810
Query: 71 CQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHH 126
QL I + L++ FF Y + W N V+ P + + +P
Sbjct: 811 HQLLHEDIGRVTVPELLTMFFHHYANFDWKNKVVDSPGTRSKYRRLLREP---------- 860
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE--------- 177
M I+T P +N + V+ S+LR + F+ R+ E + + A+WS +
Sbjct: 861 MVILTVHIPTINVARAVTASSLRTIISAFK---RVEELLAEDGARWSNVLSDTSISHNNQ 917
Query: 178 --PYLFFEAYKNYLQVDI 193
F AY +Y++V++
Sbjct: 918 TGAEKFLVAYNSYIKVNV 935
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 44/268 (16%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM--LV 83
+ + N FR+ R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADIL 859
Query: 84 SRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNV 143
FF Y + W + PI + P +N R M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWGKDAVYDPIFHGK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 144 SLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL-------------FFEAYKNYLQ 190
S+ ++R + ++ + + E A W+ L Y F ++Y +Y++
Sbjct: 913 SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969
Query: 191 VDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-----NEYIDPS 240
+++ A L+ GWVESR L + R+ +Q +P NE + S
Sbjct: 970 INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYREFPD-IQARIWPARFTQNEDHENS 1025
Query: 241 KPCP-----NSAFFMGLRRKEGVTGKER 263
P + +GLR+ + T R
Sbjct: 1026 TPAQEEHEYQGCYLIGLRKADHATDPTR 1053
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 45/288 (15%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++ QT+ L R D I + VP++ FR+ R +K WAK RG+YS GFL G+ ++
Sbjct: 745 SLSAQTLSKLKAVRDVDYIRRSVPDLAAFRLAHRFIKTWAKSRGIYSARFGFLSGIQISI 804
Query: 66 LVARVCQLY-----PNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
L+ARV +L P ++ +L + FF Y + W P+ + + P
Sbjct: 805 LLARVQKLLARESGPCSVEDLLAT-FFTHYAAFDWSARPAFDPL---------FHRHRLP 854
Query: 121 RDRSHHMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEP 178
R+ P+ Y P +N++ S+ +++ + +F+ + + S+ +P
Sbjct: 855 YTRTPREPLAVLGYFPPSLNTAAAASVPSVKTLAAEFRRAGAAFLSSSSSSSS-SSSSDP 913
Query: 179 YL---------------FFEAYKNYLQVDIV-----AADADDLLTWKGWVESRFRQLTLK 218
+ F A+++Y+++D+ A LL GW+ESR L +
Sbjct: 914 HPARSWSSLAAPSAASDFLAAHRSYVRLDVQYWGLPRARGAQLL---GWLESRCAALLVD 970
Query: 219 IERDTNGLLQCHPYPNEYIDPSKPCP---NSAFFMGLRRKEGVTGKER 263
+ R G L +P +++ + + +GL + + GKE+
Sbjct: 971 LHRRAPG-LHARMWPGRFVEEEEEEERDFRGCYLIGLDKADADMGKEQ 1017
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 37/240 (15%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+ ++R L R I + +P++ FR+ RC+K WA RRG+YS G+LGGV+ L
Sbjct: 736 NLSILSLRKLKPYRDLLYIQRTLPSLSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITL 795
Query: 66 LVARVCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+++ + + S+ LVS FF + + W N +M + + ++ PR
Sbjct: 796 MLSWAAKCLAHDSGSITAPDLVSSFFHHFAHFNWTNDMM----------YDAFFHKQKPR 845
Query: 122 -DRSHHMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELN---------- 168
RS P++ + P N ++ +L L + + + + + +
Sbjct: 846 YHRSAREPMVVLGFHAPNSNIAHTSTLPGLHTLVSEMKAADEALSDPSMTWKKFFGSTDN 905
Query: 169 --KAQWSALFEPYLFFEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIER 221
+A S + F A+ +Y+++DI A L+ GWVESR L + I +
Sbjct: 906 SPQAALSPISGASDFLSAHSSYVKIDIQFWGRTLAKGKSLV---GWVESRCLSLVVDIYK 962
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 70
T+ L R D + + VP++ FR R ++ WAK RGVY+ G+LGG+ ++++ARV
Sbjct: 893 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 952
Query: 71 CQLYP-------NAIPSMLVSRFFRVYTQWRWPNPVM---LCP---IEEDELGFSVWDPR 117
+ LV+ FF Y Q+ W ++ +CP ++ ++ G +
Sbjct: 953 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWLRLKREKGG----EKE 1008
Query: 118 KNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE 177
R M ++ P +N+S S+ ++R + ++F+ + + E+ W +
Sbjct: 1009 VYRRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKDEFKRARDLLVKGEVKS--WKEFLK 1066
Query: 178 ---PYLFFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F YK+Y++VD+ + + GW+ESR L + + R G+ +
Sbjct: 1067 GSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPGVY-VRMW 1125
Query: 233 PNEYID 238
P +++
Sbjct: 1126 PGRFVE 1131
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 36/251 (14%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
Q++ L R + + +P++ +R+ +K WA+ RG+YS G LGG++ L+
Sbjct: 752 QSIAKLKPARDLVYLRRSIPDMTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLVP 811
Query: 70 VCQLYPN----AIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC+ N A + +++ FF Y+ + W V+ P +L + R+
Sbjct: 812 VCKALANEPEAASTADILTSFFYHYSTFDWETGVVFDPFYHRDLKY----------HRTF 861
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL--- 180
P+ + P +N++ + S+ST+ + + R + + WS L
Sbjct: 862 REPLCLLGWHGPSLNTASSASISTVNALASEL---TRAAALLSQDGMTWSKFLGLELSGT 918
Query: 181 -----------FFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGLL 227
F ++Y+ Y+++ + + GW+ESRF + + I R T GL+
Sbjct: 919 PSSLIEKGAADFLDSYQTYIKISARYWGSSQQKGRKYLGWLESRFISILVDISRKTLGLV 978
Query: 228 QCHPYPNEYID 238
+P +ID
Sbjct: 979 P-RIWPARFID 988
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 112/251 (44%), Gaps = 34/251 (13%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R + + +P++ +RM +K WA+ RG+YS GFLGG++ ++L+
Sbjct: 741 QTLAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVP 800
Query: 70 VCQLYPNA----IPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+C+ + P+ +V FFR Y+ + W ++ P +L + +R+
Sbjct: 801 ICKALASGSETVSPTDIVVTFFRHYSNFDWKTSMVFDPFFHKDLRY----------NRTF 850
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF------- 176
P+ + P +N++ S T+ + + + NR+ E N W+++
Sbjct: 851 REPLCLIGWHAPALNTAPIASNPTVMTIAAEIERANRLLSE---NGCTWNSVLGLQSAQE 907
Query: 177 -----EPYLFFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQC 229
F + +K Y+++D + + GW+ESR L + + R L+
Sbjct: 908 AGKSRGATEFLKEFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV-A 966
Query: 230 HPYPNEYIDPS 240
+P+ ++D S
Sbjct: 967 RIWPSRFLDTS 977
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 128/303 (42%), Gaps = 44/303 (14%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
Q++ L R + + +P++ +R+ +K WAK RG+Y+ G LGG++ ++
Sbjct: 761 QSLAKLKPARDLFYLRRSIPDMTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLVP 820
Query: 70 VCQLYPN----AIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC+ N A + +++ FF Y+ + W V+ P EL + R+
Sbjct: 821 VCKALANEPEAASTADVLTSFFHHYSTFDWATGVVYDPFYHTELRY----------HRTF 870
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQW---------SA 174
P+ + P +N++ + S+ST+ + +F + + + +++ S+
Sbjct: 871 REPLCLLGWHGPSLNTASSASISTVNALASEFTRAATLLSQEGMTWSKFLGVEQSESPSS 930
Query: 175 LFEPYL--FFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
L E F ++Y+ Y+++ + + GW+ESR + + I R + G++
Sbjct: 931 LLEKGAADFLDSYRTYIKISARYWGSSQQKGRKYLGWLESRLISILVDISRKSPGIVP-R 989
Query: 231 PYPNEYIDPSKPCPNS---------AFFMGLRRKEGVTGKERQQFD-----IRGTVDNFR 276
+P + D + N+ + +GL++ + K I+G + F
Sbjct: 990 IWPARFTDEEQSSSNTDAENPELTACYLIGLKKDDAAANKSATSLTTAEGAIQGILQEFE 1049
Query: 277 EEI 279
I
Sbjct: 1050 SRI 1052
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 150 VMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVE 209
VM E+F+ G + +EI K+ WS L EP FF+ Y++Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 210 SRFRQLTLKIERD---TNGLLQCHPYP--------NEYIDPSKPCPNSAFFMGL--RRKE 256
S+ R L +ER+ T + +P N Y+ S +F+G+ RR E
Sbjct: 63 SKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFLGIIFRRVE 114
Query: 257 GVTGKERQ-QFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQL 301
+DI+ D + K GM I +HV+++QL
Sbjct: 115 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 160
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 28/246 (11%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R + + +P++ +RM +K WA+ RG+YS GFLGG++ ++L+
Sbjct: 741 QTLAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVP 800
Query: 70 VCQLYPNA----IPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+C+ + P+ +V FFR Y+ + W ++ P +L + +R+
Sbjct: 801 ICKALASGSEIVSPTDIVVTFFRHYSNFDWKTSMVFDPFFHKDLRY----------NRTF 850
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEE--------IELNKAQWSAL 175
P+ + P +N++ S T+ + + + NR+ E + L AQ +
Sbjct: 851 REPLCLIGWHAPALNTAPIASNPTVMAIAAEIERANRLLSEDGCTWNSVLGLQSAQEAGK 910
Query: 176 FEPYL-FFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
F + +K Y+++D + + GW+ESR L + + R L+ +
Sbjct: 911 SRGATEFLKEFKTYVKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV-ARIW 969
Query: 233 PNEYID 238
P+ +ID
Sbjct: 970 PSRFID 975
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R + + VP++ FRM+ + +K WAK RG+Y+ G+LGG++ ++++ +
Sbjct: 734 QTLLKLKPARDLFYLQRSVPDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVK 793
Query: 70 VCQ--LYPNAIPSM--LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
VC+ L+ + S +++ FF Y+Q W ++ P L + + PR+
Sbjct: 794 VCKMLLHDGGVVSTADIITTFFDHYSQLDWQRDMVFDPFFHKNLKY-----HRTPREA-- 846
Query: 126 HMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFE-------- 177
M ++ P +N++ S+ T ++++ + + ++ + W +L
Sbjct: 847 -MCLLGWHSPTLNTALTASVPTTKIISAEL---CQATTQLSRDGTSWQSLLSIPDSSHSK 902
Query: 178 -----PYLFFEAYKNY--LQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
F +++++ L+V A + GW+ESR L + + + L
Sbjct: 903 NMTPGASNFLGSFRSFINLRVHYWGASLERGSRLVGWLESRCASLLVDVNKRVPE-LSAR 961
Query: 231 PYPNEYIDPS 240
+P ++D S
Sbjct: 962 IWPARFVDSS 971
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 39 RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP-----------NAIPSMLVSRFF 87
R +K WA+ RG+Y+ G+LGG+ A+L+ARV +L +A+P +L + FF
Sbjct: 55 RSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILAT-FF 113
Query: 88 RVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAY--PCMNSSYNVSL 145
R Y + W + P K P R+ P++ Y P +N+S + S+
Sbjct: 114 RDYAGFDWATQMAFDPFFHGH---------KAPHVRTAGEPLVILGYHRPQLNTSMSASV 164
Query: 146 STLRVMTEQFQWGNRICEEIELNKAQWSALFE-------------------PYLFFEAYK 186
S++RV+ + + +R+ + + W A F AY+
Sbjct: 165 SSVRVLAAELRRADRL---LSAGRISWDAFLGGGGDEGDSSTIVAGRLLSGAATFVCAYR 221
Query: 187 NYLQVDI--VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI 237
Y+++D+ ++ GW+ESR L + + R L H +P ++
Sbjct: 222 TYVKIDLQYWGLSLQRGASFVGWLESRCAMLLVDVARRLPQ-LNTHIWPGRFV 273
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVP-NVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
S L V T S+NG R ++ + +P + F L+ +K WA RR VY N+ + G
Sbjct: 156 SFLLQVARDTRHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSG 215
Query: 61 VNWALLVARVCQLYPNAIPSMLVSRFFRVYTQW 93
V A++VAR+CQ+ P + P++L+ FF YTQW
Sbjct: 216 VVLAIMVARICQVMPASHPNVLLRFFFLFYTQW 248
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus
ND90Pr]
Length = 1226
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 42/246 (17%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+ ++R L R + + +P+ FR R +K W +RG+Y+ G+LGG++ L
Sbjct: 760 NLSMLSLRKLKPYRDLLYLQRTIPSRSLFRQAYRLIKLWGVQRGLYAAKFGYLGGMHITL 819
Query: 66 LVARVCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+++ VC+ + + S+ +V FF+ Y + W N ++ + + +K PR
Sbjct: 820 MLSWVCKSLAHDVGSVNVADIVVSFFQHYANFDWSN----------DMVYDAFFHKKKPR 869
Query: 122 -DRSHHMPIITPAYPCMNSSY--NVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF-- 176
+RS P++ ++ NS++ ++ L+++ ++F+ + E + W F
Sbjct: 870 YNRSTREPMVILSFHAPNSNFAQKSTVPGLQMLIKEFKAADMKLSEPGMT---WQKFFST 926
Query: 177 ------EPYL------FFEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKI 219
+P L F AY +++++DI + A L+ GWVESR + + I
Sbjct: 927 SSDLALKPCLPSGVVEFLNAYSDFVKIDIQFWGRMLAKGKGLV---GWVESRCISIVVDI 983
Query: 220 ERDTNG 225
+ G
Sbjct: 984 HKALPG 989
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 51/316 (16%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM---- 81
+ VPN FR+ R +K WAK RG+YS+ G+LGG++ +++++V +L P+ P+
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPSAAD 857
Query: 82 LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSY 141
++ FF Y + W VM P + P R M I+T P MN +
Sbjct: 858 ILCTFFNYYGNFNWKEGVMYDPSFHKK-------PPLYHRTPQEGMVILTLHAPVMNVAR 910
Query: 142 NVSLSTLRVMTEQFQWGNRICEE----------IELNKAQWSALFEPYLFFEAYKNYLQV 191
+ S+ + R + ++ + + + E I N + S F +Y +Y+++
Sbjct: 911 SASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSYNSYIKI 970
Query: 192 DI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYI-----DPSK 241
++ A L+ GW+ESR L + R +Q +P + D S
Sbjct: 971 NVQYWGLSLAKGSSLV---GWLESRCLVLLADLHRKFPD-IQTRIWPARFTQIEDHDDST 1026
Query: 242 PCP-----NSAFFMGLRRKEGVTGKER---------QQFDIRGTVDNFREEIGMY--MFW 285
P + + L + E T R ++ ++D F I Y F
Sbjct: 1027 PAQEEREYQGCYLISLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHNYKKYFD 1086
Query: 286 KPGMDIYVSHVRRRQL 301
+ VSHV++ L
Sbjct: 1087 SASAWVDVSHVKQGNL 1102
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 171 QWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
QW+ LFEP+ + + Y+ +L++ + A +L W GWV+SRFR L LK+ER ++C
Sbjct: 301 QWTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLERAG---IECD 357
Query: 231 PYPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDNFREEI 279
P P+E +D + PN F+ GL + + Q D ++F E I
Sbjct: 358 PCPSEEVDHTDNDPNVVFYWGLIPERII------QVDTSSLKEDFMESI 400
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%)
Query: 25 LKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVS 84
L + ++ F+ LRC+K WA++RG++ + GF G++ A+L A VC+ +P+A + L +
Sbjct: 220 LPVIDALKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVNGLFA 279
Query: 85 RFFRVYTQWRWPNP 98
FF+ + W W P
Sbjct: 280 VFFQTFAHWPWQVP 293
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus
heterostrophus C5]
Length = 1226
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 42/246 (17%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+ ++R L R + + +P+ FR R +K WA +RG+Y+ G+LGG++ L
Sbjct: 760 NLSMLSLRKLKPYRDLLYLQRTIPSRSIFRQAYRLIKLWAVQRGLYAAKFGYLGGMHITL 819
Query: 66 LVARVCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPR 121
+++ VC+ + + S+ +V FF+ Y + W N ++ + + +K PR
Sbjct: 820 MLSWVCKSLAHNVGSVSIADIVVSFFQHYANFDWSN----------DMVYDAFFHKKKPR 869
Query: 122 -DRSHHMPIITPAYPCMNSSY--NVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF-- 176
+RS P++ ++ NS++ ++ L+ + ++ + + E + W F
Sbjct: 870 YNRSAREPMVILSFHAPNSNFAQKSTVPGLQTLIKELKAADMKLSEPGMT---WQKFFST 926
Query: 177 ------EPYL------FFEAYKNYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKI 219
EP L F Y +++++DI + A L+ GWVESR + + I
Sbjct: 927 SSDLASEPRLPYGAVEFLNTYNDFVKIDIQFWGRMLAKGKSLV---GWVESRCISIVVDI 983
Query: 220 ERDTNG 225
+ G
Sbjct: 984 HKALPG 989
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 34 FRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA---RVCQLYPNAIPSMLVSRFFRVY 90
FR +R ++ WA R+ + NV GF G ++WA+L A CQ L+ FF +
Sbjct: 746 FRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLLQNFFDLL 805
Query: 91 TQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRV 150
Q W P+ L + G S + RK+ RD MP+++ YP N++ N++ ST +V
Sbjct: 806 AQHSWVIPIGL------QEGTSSYIVRKH-RD---WMPVVSAFYPYKNTTRNLTQSTAKV 855
Query: 151 MTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVES 210
+ + Q + + +N W F + Y L +++ A++ +L +G +
Sbjct: 856 IQGEIQKARLLLQNTSIN---WLTFFAATDVQKEYTQLLILELSASNEQNLELAQGKLLG 912
Query: 211 RFRQLTLKIERDTNGLLQ 228
+ L +E+ L++
Sbjct: 913 SLLGVILALEQQVKALVR 930
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 34/231 (14%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM--LV 83
+ + N FR+ R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S+ ++
Sbjct: 799 RTIQNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTASVADIL 858
Query: 84 SRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNV 143
FF Y + W ++ ++ F PR N R M I+T YP MN +
Sbjct: 859 RTFFNHYADFYWMEGMVY------DMIFHRKQPRYN-RSPREGMVILTLHYPIMNVARTA 911
Query: 144 SLSTLRVMTEQFQWGNRICEEIELNKAQWSALF-------EPYL------FFEAYKNYLQ 190
S+S++R + ++ + + E + +W++L +P L F ++Y +Y++
Sbjct: 912 SISSMRTIVDEMDRADTLISE---GRLRWTSLVGITPQAGQPTLSNSADEFLKSYNSYIK 968
Query: 191 VDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+++ A L+ GW+ESR L I R LQ +P +
Sbjct: 969 INVQYWGLSLAKGSSLI---GWLESRCLFLLADIHRKLPD-LQTRIWPARF 1015
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 127 MPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYK 186
MPI+ P P + N++ T + + E+ G + +E + +W LF P+ + Y+
Sbjct: 93 MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYE 152
Query: 187 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNS 246
+L++ + A +++L W GWV+SRFR L LK+E + ++C P E +D ++
Sbjct: 153 EFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE---SIGVECDPDSTEEVD------HT 203
Query: 247 AFFMGLRRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWK---PGMDIYVSHVRRRQLPS 303
F + G+ K DI ++F +++ ++ K + +S VR QLP
Sbjct: 204 VFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPK 263
Query: 304 FVF 306
++
Sbjct: 264 SLY 266
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 108/248 (43%), Gaps = 35/248 (14%)
Query: 150 VMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVE 209
V E+F+ G I +EI L+KA+WS FE FF+ K+Y+ + A L W G VE
Sbjct: 2 VAVEEFKQGLAITDEILLSKAKWSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGLVE 61
Query: 210 SRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPN--SAFFMGLRRKEGVTGKERQ--- 264
S+ R L +E+ NE+I + P + + +GL K+ +
Sbjct: 62 SKIRILVGSLEK------------NEFITLAHVNPEFRTIWVIGLVFKKTENSENLNVDL 109
Query: 265 QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQA 323
+DI+ +D +R+ I MF + M HV+R+QL + PS ++
Sbjct: 110 TYDIQSFMDTVYRQAINSKMF-ELDMKTAAMHVKRKQLHQLL---------PSYVLQKRK 159
Query: 324 GKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASISSEVPQPVSPGKTTGDSTN 383
E+VK+ S L + ++ M P ++K + ++S G + G ++
Sbjct: 160 KHSTEEVKLTALNDSTLDLSMDSDNSMSVPSPTNAMKTSPLNSS-------GSSQGRNSP 212
Query: 384 DSEVMSAG 391
D V +A
Sbjct: 213 DPAVTAAS 220
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 25/136 (18%)
Query: 281 MYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSG- 339
MY WKPGMD+ V+HV R Q+PS+VF GYK+P P+ H N+Q QS G
Sbjct: 1 MYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPTMHANQQE----------QSDGDGT 50
Query: 340 ------RHLKREKEHEME-EVRPDKSVKRASISSE-VPQPVSPGKTTGDSTND------S 385
LKR+ + + V KSVKRAS+S V P G + + D S
Sbjct: 51 FSPYLESQLKRKYISDGDGHVDLCKSVKRASVSPPGVGTPPHLGNSVSNVVCDSPVKFVS 110
Query: 386 EVMSAGGHLVSEKDTM 401
V+ +G H S D +
Sbjct: 111 SVVCSGAHASSSHDDI 126
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Query: 2 SVLNNVDEQTVRSLNGCRVADQILKHVP--NVEHFRMTLRCLKFWAKRRGVYSNVTGFLG 59
S+L ++D+ ++ +++G R+ + NV F+++L+C+K+WA +RG+Y+ G+L
Sbjct: 113 SLLQDMDDASLATMDGPRLNQFNKSQIKPSNVRLFQVSLQCIKYWAIQRGLYNAEIGYLN 172
Query: 60 GVNWALLVARV---CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDP 116
LL+ + Q ++++ FF+++++W W PV+L D+ G + +
Sbjct: 173 ETACTLLLIKTFMFIQSKEKLSITIILQNFFQMWSKWPWKTPVILTNHIPDKNGNKL-EY 231
Query: 117 RKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGN 159
+ MPII+P YP + + V+ T + + +F+ GN
Sbjct: 232 SSITGSQKAMMPIISPCYPVYSVTPYVTKLTQKTIQLEFERGN 274
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 110/283 (38%), Gaps = 47/283 (16%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R +L+ +P++ FR+ +K WA RG+Y G L G++ +L+
Sbjct: 759 QTLAKLKPARDLYYLLRSIPDLAKFRVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVP 818
Query: 70 VCQLYPNAIPSMLVS------RFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDR 123
+C+ A SM VS FF Y W V+L P EL + R
Sbjct: 819 ICKQL--AAISMAVSTTDILTTFFSHYADLEWETHVVLDPFYHRELRYH----------R 866
Query: 124 SHHMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL- 180
+ P + P +N++ S T++ + + N + + A W + P
Sbjct: 867 TSREPFCLLGWHAPALNTAMAASTPTVKSIAAELSKANSLLSQ---PGATWGTILGPAST 923
Query: 181 -------FFEAYKNYLQVD--IVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHP 231
F + +K+Y+++D + W+ESR + + R LL
Sbjct: 924 AASGVRDFLQNFKSYVKIDARFWGPSPSSGRKFLSWLESRCVAVLADMTRKAPSLLP-RL 982
Query: 232 YPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQQFDIRGTVDN 274
+P +ID PN+ + VTG E F + G N
Sbjct: 983 WPGRFIDR----PNT---------DTVTGSEYHCFYLIGLAWN 1012
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
N+ ++R L R I + +P++ FR RC+K WA +RG+YS+ G+L G + L
Sbjct: 752 NLPALSLRKLKSYRDFLYIQRTLPSLSAFRTAFRCIKLWAVQRGIYSSKFGYLSGTHITL 811
Query: 66 LVARVC-----QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNP 120
++ +C Q P M+VS FF Y + W N EL F + P
Sbjct: 812 MLTWICKKLRYQSGSVGPPDMVVS-FFSYYANFDWTN----------ELLFDAFFHESRP 860
Query: 121 R-DRSHHMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQ 156
R RS P++ Y P N ++ + L+++ +F+
Sbjct: 861 RYHRSAREPMVILGYHAPHSNIAHTSTTPGLQILMNEFR 899
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 121/307 (39%), Gaps = 34/307 (11%)
Query: 28 VPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI---PSMLVS 84
+P++ F R LK + RRG+ G+LGG + LL+ RV P++ LV
Sbjct: 738 IPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAITLPHSAGRSAPHLVE 797
Query: 85 RFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVS 144
F R Y W W + +G + R R+ M +++ + P N + N S
Sbjct: 798 AFLREYAVWDWTQDTVHPIPAAAAVGTGAYK-RVVQREP---MAVLSISKPQKNIASNAS 853
Query: 145 LSTLRVMTEQFQWGNRICEEIELNKAQWSAL--FEPYL-FFEAYKNYLQVDIVAADADDL 201
+++ ++ Q N + + W + P F + Y++++++++ D +
Sbjct: 854 WNSVASLSHGLQTANATLQ----SGGTWLDVCGTNPLKSFIDEYRSFVKIEVHYWGGDCM 909
Query: 202 L--TWKGWVESR----FRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNSAFFMGL--- 252
GW+ES+ QL + + T L +DP+ PNS + +GL
Sbjct: 910 QGRALMGWLESKIVSLLVQLHMTVPEVTARLWPQRLVDESVVDPNTRDPNSFYLLGLSLF 969
Query: 253 --------RRKEGVTGKERQQFDIRGTVDNFREEIGMYMFWKPGMDIYVSHVRRRQLPSF 304
RR G +R N R Y I VSH +R QLPS
Sbjct: 970 SQGDEQTARRSSGELEAALLN-ALRTFEQNVRSNEKYYN--AASTFISVSHAKRTQLPSS 1026
Query: 305 VFPDGYK 311
V D +K
Sbjct: 1027 VLVDPFK 1033
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 44/268 (16%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM--LV 83
+ + N FR+ R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADIL 859
Query: 84 SRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNV 143
FF Y + W + PI ++ P +N R M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 144 SLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL-------------FFEAYKNYLQ 190
S+ ++R + ++ + + E A W+ L Y F ++Y +Y++
Sbjct: 913 SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969
Query: 191 VDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-----NEYIDPS 240
+++ A L+ GWVESR L + R+ +Q +P NE + S
Sbjct: 970 INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYREFPD-IQARIWPARFTQNEDHENS 1025
Query: 241 KPCP-----NSAFFMGLRRKEGVTGKER 263
P + +GLR+ + T R
Sbjct: 1026 TPAQEKHEYQGCYLIGLRKADHATDPTR 1053
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 44/268 (16%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM--LV 83
+ + N FR+ R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADIL 859
Query: 84 SRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNV 143
FF Y + W + PI ++ P +N R M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 144 SLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL-------------FFEAYKNYLQ 190
S+ ++R + ++ + + E A W+ L Y F ++Y +Y++
Sbjct: 913 SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969
Query: 191 VDI-----VAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYP-----NEYIDPS 240
+++ A L+ GWVESR L + R+ +Q +P NE + S
Sbjct: 970 INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYREFPD-IQARIWPARFTQNEDHENS 1025
Query: 241 KPCP-----NSAFFMGLRRKEGVTGKER 263
P + +GLR+ + T R
Sbjct: 1026 TPAQEEHEYQGCYLIGLRKADHATDPTR 1053
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
++ Q + L R D I + +P++ FR R + WAK RGVY + G+LGG++ +
Sbjct: 775 DLSYQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITM 834
Query: 66 LVARVCQLYPNAI---PSMLVSRFFRVYTQWRWPNPVMLCPI 104
+++RV +L+ + + ++ RFF+ Y + W + + P
Sbjct: 835 MLSRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVFDPF 876
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 69
QT+ L R + + +P++ +R+ +K WA+ RG+Y+ G LGG++ + ++
Sbjct: 748 QTLAKLKPARDLFYLRRSIPDMTKYRVAHLFIKAWAQSRGLYAAKYGMLGGIHISSMLVP 807
Query: 70 VCQLYPNAIPSM----LVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
+C+ N ++ +++ FF+ Y+++ W ++ P L + R+
Sbjct: 808 ICKALANESEAVSTADILTTFFQHYSKFNWETGMVFDPFYHLGLKYH----------RTF 857
Query: 126 HMPIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYL--- 180
P+ + P +N++ S+ST+ +T + + + ++ +++ L +
Sbjct: 858 REPLCLLGWHGPSLNAASTASISTVNALTSELVRAAALFHQQDVTWSRFLGLEQSATPLT 917
Query: 181 --------FFEAYKNYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCH 230
F +Y++Y+++ + + GW+ESR + + I R + L+
Sbjct: 918 LIEKGAADFLNSYRSYIKISARYWGSSQQKGRKYLGWLESRCISILVDISRKSPSLIP-R 976
Query: 231 PYPNEYI--DPSKPC------PNSAFFMGLRRKEGVTGK 261
+P + DP+ N+ + +GL+ E V+ K
Sbjct: 977 MWPARFADEDPTNSTYDQTSELNACYLVGLKWDENVSDK 1015
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 94/239 (39%), Gaps = 25/239 (10%)
Query: 6 NVDEQTVRSLNGCRVADQILKHV----------PNVEHFRMTLRCLKFWAKRRGVYSNVT 55
+ E +L+ AD +L+ V E F R +K WA+ +G+ +
Sbjct: 678 ELGEAAAMALSAVTDADALLEAVDAASAPSAAPRRREAFLALGRAVKAWARAKGIDAAPF 737
Query: 56 GFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWD 115
G L G+ W +L ARV P+ P L+SRFF + W + P+ L P +V
Sbjct: 738 GGLPGIAWLVLAARVVCDAPDLEPGPLLSRFFGAWAAWDFRRPIALDPSAP-----AVGT 792
Query: 116 PRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQF--QWGNRICEEIELNKAQWS 173
P R I TP P + S V + L ++++ W + + +
Sbjct: 793 PGDPVR-------IATPTAPVRSCSDTVGAAALATLSDELYSAW-EAVESALAAGRDPLP 844
Query: 174 ALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPY 232
L P + + + + A + + + + GWV R R L ER G L+ P+
Sbjct: 845 DLLAPPPLHRRHAAWAVITVEAPEPEGVASGLGWVRGRIRALLSSFERAGVGDLRAWPH 903
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 17/224 (7%)
Query: 150 VMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVE 209
VM E+ + G I +EI L+KA+WS LFE FF+ YK+Y+ + A L VE
Sbjct: 2 VMVEELKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDLVE 61
Query: 210 SRFRQLTLKIERDT-NGLLQCHP--YPNEYIDPSKPCPNSAFFMGLRRKEGVTGKERQ-- 264
S+ L +E++ L +P +P +P K + + +GL K+ +
Sbjct: 62 SKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPDKEEFRTMWVIGLVFKKTENSENLSVD 121
Query: 265 -QFDIRGTVDN-FREEIGMYMFWKPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQ 322
+DI+ D + + I MF + M I HV+R+QL + PS ++
Sbjct: 122 LTYDIQSFTDTVYSQAINSKMF-ELDMKIAAMHVKRKQLHQLL---------PSHMLQKR 171
Query: 323 AGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSVKRASISS 366
E VK+ S L + ++ M P ++K + ++S
Sbjct: 172 KKHSTEGVKLTALNDSTLDLSMDSDNSMSVPSPTSAMKTSPLNS 215
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 26 KHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSM--LV 83
+ + N FR+ R +K WAK RG+YS+ G+LGG++ L+++R+ +L P S+ ++
Sbjct: 799 RTIKNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTTSVADIL 858
Query: 84 SRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNV 143
FF Y + W ++ ++ F PR N R M I+T YP MN +
Sbjct: 859 RTFFNHYADFYWMEGMVY------DMNFHRKQPRYN-RSPRECMVILTLHYPIMNVARTA 911
Query: 144 SLSTLRVMTEQFQWGNRICEE---IELNKAQW 172
S+S++R + ++ + + E I++N W
Sbjct: 912 SISSMRTIVDEMNRADTLISEGRYIKINVQYW 943
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 95/253 (37%), Gaps = 40/253 (15%)
Query: 21 ADQILKHVPNVE-HFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIP 79
A+ +L V E F R +K WA+ RG+ S G L G+ W++L AR + P
Sbjct: 690 AEAVLASVGGHEPAFAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTVSEAGDLPP 749
Query: 80 SMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMP--IITPAYPCM 137
L+ FF + W W PV P S +P I+TP+ P
Sbjct: 750 DGLLRHFFATWAAWDWREPV------------------GGPGGTSGRLPLTIVTPSAPVR 791
Query: 138 NSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAAD 197
+ V+ ++T++ + EE + W+ L P + + V +
Sbjct: 792 PCTDQVTTGMRDLITQELFRAWELLEE----GSSWADLLTPPPLHRRHAAWAIVTVGGGP 847
Query: 198 ADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY----------IDPSKPCPNSA 247
A + +G V R R L + G CH +P + + P+ P ++
Sbjct: 848 AG--VADEGRVRGRMRALVTDLAEVAPG---CHAWPRPFTTAPARYAIGLGPTPPTADAL 902
Query: 248 FFMGLRRKEGVTG 260
+ RR G+ G
Sbjct: 903 AAVADRRLRGLAG 915
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 87/234 (37%), Gaps = 23/234 (9%)
Query: 7 VDEQTVRSLNGCRVADQILKHVPNVE-HFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 65
+D+ +L+ AD + V + F R +K WA RG+ S G L G+ W++
Sbjct: 708 LDQAAAIALSAVSDADAVRAAVGDHHTAFTRLARQVKAWAGARGLDSAPFGGLPGLAWSV 767
Query: 66 LVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSH 125
L AR + ++ L+ FF + W W +PV L P
Sbjct: 768 LAARTAREATDSAAPDLLRHFFGTWAAWDWRDPVGLAPTGT-----------------GP 810
Query: 126 HMPII--TPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICE-EIELNKAQWSALFEPYLFF 182
H P++ TP P N + V ++T++ I E + + W L P
Sbjct: 811 HTPVVLMTPTDPVRNCTGQVGAGFRDLLTDELYRAWTILETAADADTNPWPELLSPPSLH 870
Query: 183 EAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ + + + A++ G V R R L +E G + +P +
Sbjct: 871 RRHAAWAVLTVRPGPAEEFEETSGRVRGRLRALLTALE--DAGAADAYAWPRPF 922
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 59.7 bits (143), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
Query: 68 ARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEED--ELGFSVWDPRKNPR---D 122
ARV L P +PSML+ RFFRV+ +W+WP+PVMLC IE D ELG P ++ R
Sbjct: 28 ARVPVL-PQRLPSMLLPRFFRVFARWKWPSPVMLCAIEHDDGELGLKR-HPARHHRAACR 85
Query: 123 RSHHMP 128
R H+P
Sbjct: 86 RQRHLP 91
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 33/51 (64%)
Query: 119 NPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNK 169
NP DR H MPIITPAYP NS+YNVS ST VM E+F+ R I + K
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQVYRQANNINMLK 266
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 26/189 (13%)
Query: 41 LKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY----PNAIPSMLVSRFFRVYTQWRWP 96
LK WAK RG+YS+ G LG +N ++++ +C+L P+A + +++ FF Y + W
Sbjct: 11 LKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTFFHHYRNFDWK 70
Query: 97 NPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQ 156
++L P+ + K R + M ++ P N++ N + ST+ +++ +
Sbjct: 71 TNMVLDPLFHGTV--------KYHRTQRESMCLLGWHTPSRNTALNATASTIHILSAEIM 122
Query: 157 WGNRICEEIELN-----KAQWSALFEPYL-------FFEAYKNYLQVD--IVAADADDLL 202
+ + + +N + S L P L F +++K Y++++ +
Sbjct: 123 RASDLLSQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNASYLGCSPRKGK 182
Query: 203 TWKGWVESR 211
+ GW+ESR
Sbjct: 183 RFVGWLESR 191
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 89/237 (37%), Gaps = 36/237 (15%)
Query: 34 FRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQW 93
F R +K WA+ RG+ S G L G+ W++L AR + PS L+ FF + W
Sbjct: 700 FAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPSCLLRHFFATWAAW 759
Query: 94 RWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTE 153
W PV +E G + + TP+ P + + V+ ++T+
Sbjct: 760 DWREPV--GGLEGAPAG---------------PLTVATPSAPVRSCTDQVTADMRDLITQ 802
Query: 154 QFQWGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFR 213
+ + EE A W+ + P + + V A D + +G V R R
Sbjct: 803 ELFRAWELLEE----GASWTEVLAPPPLHRRHAAWAVV--TAGAGTDGVVDEGRVRGRMR 856
Query: 214 QLTLKIERDTNGLLQCHPYPNEY----------IDPSKPCPNSAFFMGLRRKEGVTG 260
L + G CH +P + + P+ P + + RR G+ G
Sbjct: 857 ALITDLAGLAPG---CHAWPRPFATAPVRYAIGLGPTPPAAEALAAVADRRLRGLAG 910
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 6 NVDEQTVRSLNGCR----VADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
N+ E+++ SLNG R V Q + F+ +R L+ W+KR+ +YSN GF GG+
Sbjct: 198 NMHEKSILSLNGYRTNIHVKSQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGI 257
Query: 62 NWALLVARV 70
N +LVA V
Sbjct: 258 NCIILVANV 266
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 77/208 (37%), Gaps = 33/208 (15%)
Query: 34 FRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQW 93
F R +K WA+ RG+ S G L G+ W++L AR + P L+ FF + W
Sbjct: 757 FARLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPYDLLRHFFATWAAW 816
Query: 94 RWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMP--IITPAYPCMNSSYNVSLSTLRVM 151
W PV P +SH +P I TP+ P + V+ ++
Sbjct: 817 DWRTPV-------------------GPAGQSHALPLTITTPSAPIRPCTDQVTAGMRDLV 857
Query: 152 TEQFQWGNRICEEIELN---KAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWV 208
T++ + E + + W+ L P + + V AD +G +
Sbjct: 858 TQELFRAWEVLEGAPTDPTARYPWAELLAPPPLHRRHAAWAVV-TAGPGAD-----EGRL 911
Query: 209 ESRFRQLTLKIERDTNGLLQCHPYPNEY 236
R R L + T CH +P +
Sbjct: 912 RGRTRSLITDLAETTP---DCHAWPRPF 936
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 6 NVDEQTVRSLNGCR----VADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
N+ E+++ SLNG R V Q + F+ +R L+ W KR+ +YSN GF GG+
Sbjct: 255 NMHEKSILSLNGYRTNIHVKSQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGI 314
Query: 62 NWALLVARV 70
N +LVA V
Sbjct: 315 NCIILVANV 323
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 6 NVDEQTVRSLNGCR----VADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGV 61
N+ E+++ SLNG R V Q + F+ +R L+ W KR+ +YSN GF GG+
Sbjct: 198 NMHEKSILSLNGYRTNIHVKSQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGI 257
Query: 62 NWALLVARV 70
N +LVA V
Sbjct: 258 NCIILVANV 266
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 28/193 (14%)
Query: 19 RVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ------ 72
R D + + +P+ FR+ R +K WAK RG+Y+ GFL G+ ++L+ARV +
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARVHKLLTRTT 696
Query: 73 -----LYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHM 127
P L++ FF Y + W + + P + P R+
Sbjct: 697 TTTPTRTTPPTPETLLTTFFTHYATFDWAHQLAFDPF---------FHRHALPYTRTPRE 747
Query: 128 PIITPAY--PCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALF-----EPYL 180
P+ Y P N++ S+ + + + +F+ + E W+
Sbjct: 748 PLAVLGYFAPARNTALAASVPSTKTLAAEFRRAADVLRG-ENGALGWAGFLGGGSGAKDD 806
Query: 181 FFEAYKNYLQVDI 193
F A+++Y+++D+
Sbjct: 807 FLAAHRSYVKLDV 819
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 21 ADQILKHVPN-VEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIP 79
A+ +L V + V+ FR R +K WA+ RG+ S G + GV WA+L AR +
Sbjct: 655 AEAVLAAVGDRVDRFRRLAREVKGWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFD 714
Query: 80 SMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMPIITPAYPCMNS 139
++ FF + W W +P+ L + P + I+TPA P +
Sbjct: 715 GGGLAEFFGTWAAWDWRDPIGLGAV---------------PERTGAPVTIMTPAAPVRSC 759
Query: 140 SYNVSLSTLRVMTEQF--QW------GNRICEEIELNK--AQWSALFEPYLFFEAYKNYL 189
+ V ++T + W G + +L++ A W+ + P+ + L
Sbjct: 760 TEQVGPGFRDLLTAELYRAWEVVEAGGTDLATPPDLHRVHAAWAVVTVPHDRVGPVRGRL 819
Query: 190 QVDIVA------ADAD 199
+ + A ADAD
Sbjct: 820 RALLTALETAGVADAD 835
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 84/232 (36%), Gaps = 48/232 (20%)
Query: 21 ADQILKHVPNVEH--FRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ----LY 74
AD + + V EH F R +K WA+ RG+ S G L G+ WA+L AR + L
Sbjct: 399 ADAVRESV-GAEHAAFARLAREVKAWARARGLDSAPFGGLPGIAWAVLAARTVREAAALS 457
Query: 75 PNAIP------SMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKNPRDRSHHMP 128
P+ + L+ FF + W W +PV L HH P
Sbjct: 458 PDGLSPDGLSLDGLLREFFGAWAAWDWCDPVAL-----------------------HHPP 494
Query: 129 IITPAYPCMNSSYNVSLST----LRVMTEQFQWGNRICEEIELNKAQWSALFEPYLFFEA 184
P S V++ T +R T Q G R EL +A S P
Sbjct: 495 ------PAPGSEGAVTVLTPSEPVRSCTAQVGPGLRDLLGRELYEAWESPQAGPPAPHRR 548
Query: 185 YKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEY 236
+ + V + A + G R R L +E G+ + H +P +
Sbjct: 549 HAAWAVVTVRGATPQEFEESLGRTRGRLRALLGALE--EGGVAEAHAWPRPF 598
>gi|194696942|gb|ACF82555.1| unknown [Zea mays]
Length = 131
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 198 ADDLLTWKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNSAFFMGLRRKEG 257
++L W GWV+SRFR L LK+E + C P P+E +D + PN FF GL +
Sbjct: 2 GEELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSEQVDHTITDPNVVFFWGLIYRRN 58
Query: 258 VTGKERQQFDIRGTVDNFREEIGMYMFWK---PGMDIYVSHVRRRQLPSFVF 306
+ Q I ++F + + ++ K DI +S V QLP VF
Sbjct: 59 I------QICISSLKEDFMKSVCNNIYGKEKCAHSDITMSIVGPPQLPKSVF 104
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 5 NNVDEQTVRSLNGCRVADQILKHVPNV-EHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
+ E +L+ AD +L V + E F R +K WAK RG+ S G L G+ W
Sbjct: 113 TELGEDAAIALSAVSDADALLDQVADRREAFTDLARRVKAWAKARGLDSAPFGGLPGLAW 172
Query: 64 ALLVARVCQLYPNAIPS-MLVSRFFRVYTQWRWPNPV 99
++L AR + A+PS L+ FF + W W PV
Sbjct: 173 SVLAARTVR-EAGALPSDELLRHFFATWAAWDWREPV 208
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEHFRMTLRCLK 42
+D T RSLNG RVAD+IL+ VP+ + F TLRC+K
Sbjct: 57 GLDLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
Length = 347
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLK 42
TVRSLNG RVAD+IL+ VP+ F TLRC+K
Sbjct: 158 TVRSLNGVRVADEILRLVPDAATFHTTLRCVK 189
>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
Length = 285
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLK 42
TVRSLNG RVAD+IL+ VP+ F TLRC+K
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63
>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
Length = 319
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLK 42
TVR+LNG RVAD+IL+ VP+ F TLRC+K
Sbjct: 135 TVRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 77/202 (38%), Gaps = 21/202 (10%)
Query: 6 NVDEQTVRSLNGCRVADQILKHVPNVEH--FRMTLRCLKFWAKRRGVYSNVTGFLGGVNW 63
+ E +L+ AD + + V H F R K WA+ RG+ S G L G+ W
Sbjct: 165 ELGEAAAVALSALDDADAVRESV-GASHAAFASLAREAKAWARARGLDSAPFGGLPGLAW 223
Query: 64 ALLVARVCQL----YPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSVWDPRKN 119
A+L AR + + P+ L FF + W W PV L P D G S P +
Sbjct: 224 AVLAARTVREAVRDAADLSPAGLRREFFGTWAAWDWSEPVSLLP--ADGAGRS---PSPD 278
Query: 120 PRDRSHHMPIITPAYPCMNSSYNVSLSTLRVMTEQFQWGNRICEEIELNKAQWSALFEPY 179
P + ++TP P + + V ++ + R E +E + L P
Sbjct: 279 P------VTVLTPRAPVRSCTAQVGPGMRDLLVRELY---RAWEVLEADPDGLGRLTAPP 329
Query: 180 LFFEAYKNYLQVDIVAADADDL 201
+ + V + A A +
Sbjct: 330 PLHRRHAAWAVVTVRAGAAGEF 351
>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
Length = 169
Score = 45.8 bits (107), Expect = 0.052, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLK 42
TVRSLNG RVAD+IL+ VP+ F TLRC+K
Sbjct: 42 TVRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73
>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
Length = 248
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLK 42
TVRSLNG RVAD+IL VP+ F TLRC+K
Sbjct: 111 TVRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 45.4 bits (106), Expect = 0.068, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 168 NKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTLKIERDTNGLL 227
N+ W+ L P+ FF+ Y+ +L ++I A L +KG VESR R L +E +
Sbjct: 16 NEVTWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKV 75
Query: 228 QCHPYP 233
P+P
Sbjct: 76 LPQPHP 81
>gi|356530683|ref|XP_003533910.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 134
Score = 44.3 bits (103), Expect = 0.17, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 33 HFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 66
HF TL CLKFWAK RG+YSNV FL + W L
Sbjct: 103 HFLTTLCCLKFWAKGRGIYSNV--FLVVLTWHFL 134
>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 10 QTVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYS 52
QT+ L R D + + +P++E FR+ R +K WA+ RGVYS
Sbjct: 507 QTLNKLKAIRDIDYLRRSLPDIESFRLAHRFIKTWARSRGVYS 549
>gi|218190338|gb|EEC72765.1| hypothetical protein OsI_06415 [Oryza sativa Indica Group]
Length = 608
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLK 42
TVRSLNG VAD+IL+ VP+ TLRC+K
Sbjct: 151 TVRSLNGVHVADEILRLVPDAAALHTTLRCVK 182
>gi|67584259|ref|XP_665040.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54655388|gb|EAL34810.1| hypothetical protein Chro.40112 [Cryptosporidium hominis]
Length = 315
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 204 WKGWVESRFRQLTLKIERDTNGLLQCHPYPNEYIDPSKPCPNSAF----FMGL------- 252
W GW+ES+ R L K+E T LQ P+P + + F ++GL
Sbjct: 12 WIGWIESKLRFLVRKLE--TFKGLQVRPWPKAIQEQDEAKDGFIFAQSMYIGLVLNNSNS 69
Query: 253 ---RRKEGVTGKERQQ-----FDIRGTVDNFREEIGMYMFW------KPGMDIYVSHVRR 298
GVTG D+RG + +F +G M W K +D+ V H+R
Sbjct: 70 NNGSSSTGVTGVSNSSGTAPVVDLRGAILDF---VGFIMNWSEVENYKDSIDLKVRHLRA 126
Query: 299 RQLP 302
+ LP
Sbjct: 127 KDLP 130
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 158 GNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADADDLLTWKGWVESRFRQLTL 217
G + + L+K WS LFEP FF Y++Y+ V + + L G VESR R L
Sbjct: 32 GLTVSSDALLHKQPWSNLFEPAFFFR-YRHYVVVIVTGSAKRSFLELCGLVESRLRVLVS 90
Query: 218 KIE 220
E
Sbjct: 91 NFE 93
>gi|326668004|ref|XP_002662132.2| PREDICTED: hypothetical protein LOC116993 [Danio rerio]
Length = 5131
Score = 38.9 bits (89), Expect = 6.9, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 310 YKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKREKEHEMEEVRPDKSV-KRASISSEV 368
Y P+P + ++ E V S SS H++ EK E + ++P S+ ASI+
Sbjct: 3360 YTTPKPDKDLSKTTFHTTEAV----SVSSSTHVEDEKT-ETDSIKPASSLMSTASITKPT 3414
Query: 369 PQPVSPGKTTGDSTNDSEVMSAGGHLVSEKDTMAAHMQLDGIVNHESVALNEQKCTLVDD 428
+S G++TG + S + ++ T ++ +E V+ + T++DD
Sbjct: 3415 FTSLSTGESTGQTVTSQATASTVRTVTNQSSTPFTATTAATVMQYEEVSTKPSESTVIDD 3474
Query: 429 LSVINNESESSDLAEPS 445
L + +++ L E S
Sbjct: 3475 LERQFSTTQTGHLDEIS 3491
>gi|125581305|gb|EAZ22236.1| hypothetical protein OsJ_05891 [Oryza sativa Japonica Group]
Length = 126
Score = 38.5 bits (88), Expect = 8.2, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 11 TVRSLNGCRVADQILKHVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGG 60
TVRSLNG RVAD+IL+ VP+ F T A R G+ + GF G
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTA------AVREGIDKLLRGFDGA 75
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,966,417,029
Number of Sequences: 23463169
Number of extensions: 384501749
Number of successful extensions: 835437
Number of sequences better than 100.0: 842
Number of HSP's better than 100.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 833439
Number of HSP's gapped (non-prelim): 1083
length of query: 550
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 402
effective length of database: 8,886,646,355
effective search space: 3572431834710
effective search space used: 3572431834710
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)