Query 008890
Match_columns 550
No_of_seqs 320 out of 1841
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 17:51:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008890.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008890hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 7.7E-48 1.7E-52 405.1 30.3 262 235-544 65-333 (365)
2 KOG0698 Serine/threonine prote 100.0 7.6E-47 1.6E-51 394.3 28.9 268 232-546 37-309 (330)
3 KOG0697 Protein phosphatase 1B 100.0 2.8E-47 6.1E-52 372.3 22.9 267 234-546 21-296 (379)
4 PF00481 PP2C: Protein phospha 100.0 1.6E-44 3.4E-49 363.3 19.9 247 237-533 2-254 (254)
5 PTZ00224 protein phosphatase 2 100.0 8.1E-43 1.8E-47 368.4 29.3 244 233-544 20-274 (381)
6 COG0631 PTC1 Serine/threonine 100.0 5.7E-42 1.2E-46 346.8 22.0 247 237-546 11-257 (262)
7 KOG0699 Serine/threonine prote 100.0 1.2E-40 2.7E-45 335.2 20.9 161 363-542 329-504 (542)
8 cd00143 PP2Cc Serine/threonine 100.0 5.6E-37 1.2E-41 304.3 28.6 253 236-540 2-254 (254)
9 smart00332 PP2Cc Serine/threon 100.0 2E-36 4.3E-41 301.6 28.3 249 236-538 7-255 (255)
10 PRK14559 putative protein seri 100.0 1.5E-36 3.3E-41 337.3 25.1 260 235-548 375-642 (645)
11 KOG0700 Protein phosphatase 2C 100.0 5.2E-35 1.1E-39 301.8 18.9 231 282-529 96-379 (390)
12 KOG1323 Serine/threonine phosp 100.0 2.2E-27 4.7E-32 237.7 21.4 247 282-545 141-491 (493)
13 KOG0618 Serine/threonine phosp 99.9 2.3E-21 5.1E-26 216.1 16.5 245 235-544 522-775 (1081)
14 KOG1379 Serine/threonine prote 99.8 1E-19 2.2E-24 183.2 18.9 204 284-540 102-330 (330)
15 PF13672 PP2C_2: Protein phosp 99.8 4.4E-18 9.5E-23 165.9 14.7 188 240-489 3-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 4.6E-15 1E-19 142.5 19.5 161 284-525 29-192 (193)
17 TIGR02865 spore_II_E stage II 99.5 2E-12 4.2E-17 148.9 21.6 194 242-540 560-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.2 2.4E-09 5.2E-14 102.5 21.5 177 284-541 3-193 (193)
19 COG2208 RsbU Serine phosphatas 97.7 0.0033 7.2E-08 67.0 19.4 176 284-541 174-366 (367)
20 smart00331 PP2C_SIG Sigma fact 21.5 6.4E+02 0.014 23.4 9.2 69 460-541 26-95 (193)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=7.7e-48 Score=405.07 Aligned_cols=262 Identities=33% Similarity=0.529 Sum_probs=217.9
Q ss_pred ceEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHH
Q 008890 235 PLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEE 314 (550)
Q Consensus 235 ~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~ 314 (550)
..+|..|++|.|+.|||+|++..++.+.- + ..........||||||||||+.+|++|++++++.|.+.
T Consensus 65 ~~~~~~s~~G~R~~nED~~~~~~~~~~~~-----------~-~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~ 132 (365)
T PLN03145 65 VRSGAWADIGSRSSMEDVYICVDNFMSDF-----------G-LKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVED 132 (365)
T ss_pred eEEEEEccccCCCCCCCceEecccccccc-----------c-ccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 35789999999999999998866542100 0 00011234689999999999999999999999998753
Q ss_pred HHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecCC
Q 008890 315 IELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGK 394 (550)
Q Consensus 315 l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~g 394 (550)
.. ....+.++|.++|.++|+++.+..... ....+|||++++++.++++||||+||||+|++|++
T Consensus 133 ~~--------------~~~~~~~al~~af~~~d~~~~~~~~~~--~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g 196 (365)
T PLN03145 133 ED--------------FPREIEKVVSSAFLQTDTAFAEACSLD--ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG 196 (365)
T ss_pred hc--------------cchhHHHHHHHHHHHHhHHHHhhhccc--cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC
Confidence 21 122467889999999999987643222 22359999999999999999999999999999999
Q ss_pred eeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCC-------CCcccceEEEEeccCCCeEEE
Q 008890 395 ESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKP-------WIIPEPEVMFLPRAREDECLI 467 (550)
Q Consensus 395 ~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~-------~v~~~Pdi~~~~l~~~D~fLI 467 (550)
++++||+||++.++.|++||.+.||.+. .+|+.|.+++||+|||..+|. .++++|++..+++.++|+|||
T Consensus 197 ~~~~LT~DH~~~~~~E~~RI~~~Gg~v~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLI 273 (365)
T PLN03145 197 KAIEMSRDHKPMCSKERKRIEASGGYVY---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLI 273 (365)
T ss_pred eEEEecCCCCCCCHHHHHHHHHcCCcee---cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEE
Confidence 9999999999999999999999999885 358899999999999987763 478999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEeccCC
Q 008890 468 LASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQR 544 (550)
Q Consensus 468 LaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~~~~ 544 (550)
||||||||+|++++++++++..+.. ..+++.+|+.|++.|+++|+.||||||||+|....
T Consensus 274 LaSDGLwdvls~ee~v~~i~~~l~~-----------------~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~ 333 (365)
T PLN03145 274 IGCDGIWDVFRSQNAVDFARRRLQE-----------------HNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQP 333 (365)
T ss_pred EeCCccccCcCHHHHHHHHHHHHhc-----------------CCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCC
Confidence 9999999999999999998775421 23578999999999999999999999999998743
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-47 Score=394.30 Aligned_cols=268 Identities=46% Similarity=0.667 Sum_probs=230.2
Q ss_pred cccceEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHH
Q 008890 232 DYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAF 311 (550)
Q Consensus 232 ~~~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L 311 (550)
......+.++.+|+|+.|||++...+.+...+ .......+||||||||||+.+|+|+.++++..+
T Consensus 37 ~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~---------------~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l 101 (330)
T KOG0698|consen 37 ESYRLGSLLSIRGRRRKMEDRHVQLPDFLEED---------------VGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNL 101 (330)
T ss_pred ccccceEEEecCCCCCccCcceeecccccccc---------------cCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 34455777799999999999999987654321 111126899999999999999999999999999
Q ss_pred HHHHHHHhhhccCCccccchHHHHHHHHHHHHH-HHHHHHcccCCCCCCCCCCCCcceEEEEEeCC-EEEEeeeCCceEE
Q 008890 312 AEEIELVKECLSDGSVVHSCQEQWKKIFTSCFA-RVDAEVGGKTNQEPVAPETVGSTAVVAIICAS-HIIVANCGDSRAV 389 (550)
Q Consensus 312 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~-~ad~~l~~~~~~~~~~~~~~GTTavvali~~~-~l~vAnVGDSRay 389 (550)
.+........ ..++++++++|. ++|.++... . .....+|||++++++..+ +|||||+|||||+
T Consensus 102 ~~~~~~~~~~-----------~~~~~a~~~~F~~~~D~~~~~~-~---~~~~~~gstav~~vi~~~~~l~vaN~GDSRaV 166 (330)
T KOG0698|consen 102 LEQLAFPKDR-----------QDVKDALRRAFLTKTDSEFLEK-R---EDNRSGGSTAVVALIKKGRKLYVANVGDSRAV 166 (330)
T ss_pred Hhhhhcccch-----------HHHHHHHHHHHHHHHHHHHHhh-c---cCCCCCcceeeeeeEecCCEEEEEEcCCCcEE
Confidence 9876543321 457899999999 699999865 1 113468999999988855 9999999999999
Q ss_pred EecCC-eeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCC-ccccccccccccccccccC-CCCcccceEEEEeccCCCeEE
Q 008890 390 LCRGK-ESMALSVDHKPNREDEYARIEAAGGKVIQWNG-HRVFGVLAMSRSIGDRYLK-PWIIPEPEVMFLPRAREDECL 466 (550)
Q Consensus 390 L~r~g-~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~-~Rv~g~LavSRsiGd~~lk-~~v~~~Pdi~~~~l~~~D~fL 466 (550)
|+++| .+++||.||+|..++|+.||+.+||++..+.+ +|++|.|++||+|||..+| ++++++|++....+...|+||
T Consensus 167 l~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFL 246 (330)
T KOG0698|consen 167 LSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFL 246 (330)
T ss_pred EecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEE
Confidence 99865 89999999999999999999999999998775 8999999999999999999 899999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEeccCCcc
Q 008890 467 ILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQRKF 546 (550)
Q Consensus 467 ILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~~~~~~ 546 (550)
||+||||||+|++||++++++..+. ....+..++..|.+.|+.+|+.||||||||.|+++.+.
T Consensus 247 iLasDGiwDv~s~qeav~~V~~~~~-----------------~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~ 309 (330)
T KOG0698|consen 247 ILASDGIWDVVSNQEAVDLVRDELA-----------------SISSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPKS 309 (330)
T ss_pred EEeCCchhcccChHHHHHHHHHHhh-----------------ccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCcccc
Confidence 9999999999999999999999530 13567899999999999999999999999999998753
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-47 Score=372.35 Aligned_cols=267 Identities=38% Similarity=0.591 Sum_probs=229.4
Q ss_pred cceEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHH
Q 008890 234 VPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAE 313 (550)
Q Consensus 234 ~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~ 313 (550)
-+.||.+||||+|-+|||++.....+. ++ -.++.||+|||||.|++.+.+|++++.+.+..
T Consensus 21 glryg~SSMQGWR~eMEDah~A~~~l~-------------~~------l~dWSfFAVfDGHAGs~va~~c~~hLlehi~s 81 (379)
T KOG0697|consen 21 GLRYGVSSMQGWRVEMEDAHTAVAGLP-------------SP------LEDWSFFAVFDGHAGSQVANHCAEHLLEHIIS 81 (379)
T ss_pred ceeeeeccccchhhhhhhhhhhhhcCC-------------CC------ccCceEEEEEcCccchHHHHHHHHHHHHHhhh
Confidence 367999999999999999998764321 11 14889999999999999999999999998876
Q ss_pred HHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecC
Q 008890 314 EIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRG 393 (550)
Q Consensus 314 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~ 393 (550)
.-.+.... .....+.+++-++..|+++|+.+...... .....++||||+.+++...++|++|+||||++++|+
T Consensus 82 se~F~~~~------k~gsv~~~~~GIrtGFL~iDE~mr~~~~~-~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rn 154 (379)
T KOG0697|consen 82 SEEFRGMT------KNGSVENVEKGIRTGFLSIDEIMRTLSDI-SKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRN 154 (379)
T ss_pred hHHHhhhc------cCCcHHHHHhhHhhcceeHHHHHhhhhhh-hcccccCCceEEEEEecCceEEEEecCcchhheecC
Confidence 53322211 12245667889999999999888765322 233356999999999999999999999999999999
Q ss_pred CeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCC---------CCcccceEEEEeccCCCe
Q 008890 394 KESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKP---------WIIPEPEVMFLPRAREDE 464 (550)
Q Consensus 394 g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~---------~v~~~Pdi~~~~l~~~D~ 464 (550)
|+.+.-|.||+|..+.|+.||.++||.+-- .|++|.|++||+|||+.+|. .++++|+++.......|+
T Consensus 155 g~~~f~TqDHKP~~p~EkeRIqnAGGSVMI---qRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eede 231 (379)
T KOG0697|consen 155 GEVVFSTQDHKPYLPKEKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDE 231 (379)
T ss_pred CceEEeccCCCCCChHHHHHHhcCCCeEEE---EEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCc
Confidence 999999999999999999999999998864 59999999999999999983 599999999999999999
Q ss_pred EEEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEeccCC
Q 008890 465 CLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQR 544 (550)
Q Consensus 465 fLILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~~~~ 544 (550)
||||||||+||+|+++|+|++++.++.. ..+...+|..+++.++-+|++||+|+|+|.|.+..
T Consensus 232 FivlACDGIwDVMtneelcefv~sRl~V-----------------t~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~AP 294 (379)
T KOG0697|consen 232 FIVLACDGIWDVMTNEELCEFVKSRLEV-----------------TSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAP 294 (379)
T ss_pred EEEEEccchhhhcccHHHHHHHHhhhee-----------------cccHHHHHHHHHHHHHhccCccCceEEEEecCCCC
Confidence 9999999999999999999999997643 45788999999999999999999999999998776
Q ss_pred cc
Q 008890 545 KF 546 (550)
Q Consensus 545 ~~ 546 (550)
|.
T Consensus 295 kv 296 (379)
T KOG0697|consen 295 KV 296 (379)
T ss_pred CC
Confidence 54
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=1.6e-44 Score=363.29 Aligned_cols=247 Identities=40% Similarity=0.629 Sum_probs=203.2
Q ss_pred EEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHHHH
Q 008890 237 WGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIE 316 (550)
Q Consensus 237 ~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~ 316 (550)
+|+.+.+|+|.+|||++.+..++... .......+|+|||||||..+++++++.++..|.+...
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~-----------------~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~ 64 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSN-----------------SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLS 64 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCC-----------------TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCcccc-----------------CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcc
Confidence 78999999999999999998765321 1124789999999999999999999999988887765
Q ss_pred HHhhhccCCccccchHHHHHHHHHHHHHH-HHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecCCe
Q 008890 317 LVKECLSDGSVVHSCQEQWKKIFTSCFAR-VDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE 395 (550)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~af~~-ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~g~ 395 (550)
..... .+.++|..+|.+ ++..+...... . ....+|||++++++.++++|+||+||||+|+++++.
T Consensus 65 ~~~~~------------~~~~al~~a~~~~~~~~~~~~~~~-~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~ 130 (254)
T PF00481_consen 65 FNDGN------------DIEEALRQAFLAFTDESLYSDSEN-N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGG 130 (254)
T ss_dssp HHTCH------------HHHHHHHHHHHHHHHHHHHHHHHH-H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTE
T ss_pred ccccc------------chhhcccceeeecccccccccccc-c-ccccccccccccccccceeEEEeeeeeeeeeeeccc
Confidence 44321 467888899998 88887652110 0 234799999999999999999999999999999998
Q ss_pred ee-eeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCC----CCcccceEEEEeccCCCeEEEEec
Q 008890 396 SM-ALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKP----WIIPEPEVMFLPRAREDECLILAS 470 (550)
Q Consensus 396 ~~-~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~----~v~~~Pdi~~~~l~~~D~fLILaS 470 (550)
.. +||+||+|.++.|+.||...||.+.. .+|+.|.|++||+|||..+|+ +++++|++..+.+.++|+||||||
T Consensus 131 ~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~--~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaS 208 (254)
T PF00481_consen 131 IIKQLTRDHKPSNPDERERIRKAGGRVSE--NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLAS 208 (254)
T ss_dssp EEEESS---STTSHHHHHHHHHTT-GEEE--TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-
T ss_pred cccccccccccchhhccceeecccccccc--chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEc
Confidence 88 99999999999999999999999875 689999999999999999998 999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCe
Q 008890 471 DGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNI 533 (550)
Q Consensus 471 DGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNi 533 (550)
|||||+|+++|+++++++.... ...++.+|+.|+++|+++|+.|||
T Consensus 209 DGlwd~l~~~ei~~~v~~~~~~-----------------~~~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 209 DGLWDVLSNEEIVDIVRESLNS-----------------GRSPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHH-----------------HSHHHHHHHHHHHHHHHTTHHSHE
T ss_pred ccccccCCHHHHHHHHHHHHhc-----------------CCcHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999985321 114899999999999999999997
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=8.1e-43 Score=368.38 Aligned_cols=244 Identities=33% Similarity=0.474 Sum_probs=202.6
Q ss_pred ccceEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHH
Q 008890 233 YVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFA 312 (550)
Q Consensus 233 ~~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~ 312 (550)
+...+|+.+++|+|++|||++++... ....||+|||||||..+++++++.+++.+.
T Consensus 20 ~~~~~g~~s~~G~R~~nED~~~v~~~------------------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~ 75 (381)
T PTZ00224 20 SIFRCASACVNGYRESMEDAHLLYLT------------------------DDWGFFGVFDGHVNDECSQYLARAWPQALE 75 (381)
T ss_pred ccEEEEEEeCCCCCCCCCCeeEeccC------------------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHH
Confidence 34569999999999999999876421 144699999999999999999998887664
Q ss_pred HHHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEe-CCEEEEeeeCCceEEEe
Q 008890 313 EEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIIC-ASHIIVANCGDSRAVLC 391 (550)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~-~~~l~vAnVGDSRayL~ 391 (550)
+.. .. ...+.|+++|..+|+++.+... .+|||++++++. +.++|||||||||+|++
T Consensus 76 ~~~----~~------------~~~~~l~~a~~~~d~~i~~~~~-------~~GsTatv~lI~~~~~l~vaNVGDSRayl~ 132 (381)
T PTZ00224 76 KEP----EP------------MTDERMEELCLEIDEEWMDSGR-------EGGSTGTFCVIMKDVHLQVGNVGDSRVLVC 132 (381)
T ss_pred hcc----cc------------ccHHHHHHHHHHHHHHHHhccc-------CCCCeEEEEEEEECCEEEEEEcccceEEEE
Confidence 321 00 0134578889999999975431 359999998876 57999999999999999
Q ss_pred cCCeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccC---------CCCcccceEEEEeccCC
Q 008890 392 RGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRARE 462 (550)
Q Consensus 392 r~g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk---------~~v~~~Pdi~~~~l~~~ 462 (550)
|+|++++||+||++.++.|++||...+|.+.. +|+.|.+++||+|||..+| +.++++|++..+.+.+
T Consensus 133 r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~---~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~- 208 (381)
T PTZ00224 133 RDGKLVFATEDHKPNNPGERQRIEACGGRVVS---NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQS- 208 (381)
T ss_pred ECCEEEEcccCCCCCCHHHHhHHHHccCEecc---ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCC-
Confidence 99999999999999999999999999998863 5899999999999997654 3467899999998765
Q ss_pred CeEEEEecCCCCC-CCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEec
Q 008890 463 DECLILASDGLWD-VMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLK 541 (550)
Q Consensus 463 D~fLILaSDGLwD-~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~ 541 (550)
++||||||||||| +++++|+.+++.+.+.. ..+++.+|+.|++.|+.+|+.||||||||++.
T Consensus 209 ~D~llLaSDGL~d~~ls~eEi~~iv~~~l~~-----------------~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~ 271 (381)
T PTZ00224 209 NDFIILACDGVFEGNFSNEEVVAFVKEQLET-----------------CDDLAVVAGRVCDEAIRRGSKDNISCLIVQLK 271 (381)
T ss_pred CCEEEEECCCcCcCccCHHHHHHHHHHHHhc-----------------CCCHHHHHHHHHHHHHhcCCCCCEEEEEEEee
Confidence 4599999999999 89999999999863210 24678999999999999999999999999998
Q ss_pred cCC
Q 008890 542 AQR 544 (550)
Q Consensus 542 ~~~ 544 (550)
..+
T Consensus 272 ~~~ 274 (381)
T PTZ00224 272 DGA 274 (381)
T ss_pred CCC
Confidence 653
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-42 Score=346.83 Aligned_cols=247 Identities=28% Similarity=0.365 Sum_probs=204.8
Q ss_pred EEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHHHH
Q 008890 237 WGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIE 316 (550)
Q Consensus 237 ~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~ 316 (550)
++.+...+.|.+|||++.+.++.. ... ..||+||||||||++|++||+.+++.|.+.+.
T Consensus 11 ~~~s~~g~~R~~NeD~~~~~~~~~--------------------~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~ 69 (262)
T COG0631 11 AGLSDVGTVRKHNEDAFLIKPNEN--------------------GNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFD 69 (262)
T ss_pred eeeccCCCccCCCCcceeeccccC--------------------Ccc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHH
Confidence 444455556899999998865211 112 57999999999999999999999999999876
Q ss_pred HHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecCCee
Q 008890 317 LVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKES 396 (550)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~g~~ 396 (550)
....... ...+.+++.+.+..+|.++..... .......||||++++++.++++|+|||||||+|++|+|++
T Consensus 70 ~~~~~~~--------~~~~~~~l~~~~~~~n~~i~~~~~-~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~ 140 (262)
T COG0631 70 ETNFNSL--------NESLEELLKEAILKANEAIAEEGQ-LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGEL 140 (262)
T ss_pred hcccccc--------chhHHHHHHHHHHHHHHHHHHhhh-cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCce
Confidence 5432211 111678999999999999987754 2344578999999999999999999999999999999999
Q ss_pred eeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcccceEEEEeccCCCeEEEEecCCCCCC
Q 008890 397 MALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDV 476 (550)
Q Consensus 397 ~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD~ 476 (550)
+|||.||++.+..++.|+...++...+ .|. .++||++|+... ..|++....+.++ +|||||||||||.
T Consensus 141 ~~lT~DH~~~~~~~~~~~~~~~~~~~~---~~~---~~ltralG~~~~-----~~p~~~~~~~~~~-d~llL~SDGl~d~ 208 (262)
T COG0631 141 KQLTEDHSLVNRLEQRGIITPEEARSH---PRR---NALTRALGDFDL-----LEPDITELELEPG-DFLLLCSDGLWDV 208 (262)
T ss_pred EEeccCCcHHHHHHHhcCCCHHHHHhC---ccc---hhhhhhcCCCcc-----cceeEEEEEcCCC-CEEEEECCCCccC
Confidence 999999999999998887666554432 222 289999999886 6899999998877 7999999999999
Q ss_pred CCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEeccCCcc
Q 008890 477 MTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQRKF 546 (550)
Q Consensus 477 Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~~~~~~ 546 (550)
+++++++++++. ..+++.++++|++.|+++|+.||+|+|+|++..+...
T Consensus 209 v~~~~i~~il~~---------------------~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~~~ 257 (262)
T COG0631 209 VSDDEIVDILKN---------------------SETPQEAADKLIELALEGGGPDNITVVLVRLNGEGET 257 (262)
T ss_pred cCHHHHHHHHhc---------------------CCCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccccc
Confidence 999999999986 4678999999999999999999999999999887643
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=335.21 Aligned_cols=161 Identities=37% Similarity=0.609 Sum_probs=148.2
Q ss_pred CCCcceEEEEEeCCEEEEeeeCCceEEEecCCeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCcccccccccccccccc
Q 008890 363 TVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDR 442 (550)
Q Consensus 363 ~~GTTavvali~~~~l~vAnVGDSRayL~r~g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~ 442 (550)
.+|||++|+++.+.+|||||.||||++++|+|+++-+|.||+|..+.|..||.++||++.- .+||+|.|.+||+|||+
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl--DGRVNGGLNLSRA~GDH 406 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL--DGRVNGGLNLSRAFGDH 406 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee--cceecCccchhhhhhhh
Confidence 4699999999999999999999999999999999999999999999999999999999974 47999999999999999
Q ss_pred ccCC---------CCcccceEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhH
Q 008890 443 YLKP---------WIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAA 513 (550)
Q Consensus 443 ~lk~---------~v~~~Pdi~~~~l~~~D~fLILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~ 513 (550)
++|. .+++-|+|....|++.|+|+||+|||||++|+.++++++++..|.. ....
T Consensus 407 aYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~-----------------n~~l 469 (542)
T KOG0699|consen 407 AYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAK-----------------NSSL 469 (542)
T ss_pred hhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhc-----------------CchH
Confidence 9984 5889999999999999999999999999999999999999997642 3456
Q ss_pred HHHHHHHHHHHHhCC------CCCCeEEEEEEecc
Q 008890 514 QAAAEYLSNRALQKG------SKDNISVVVVDLKA 542 (550)
Q Consensus 514 q~aA~~Lv~~Al~~G------s~DNiTVIVV~l~~ 542 (550)
..+|+.|++.++.-. +.||+|||++.|+.
T Consensus 470 s~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkr 504 (542)
T KOG0699|consen 470 SEICEELCDACLAPSTDGDGTGCDNMTVIITTFKR 504 (542)
T ss_pred HHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEecc
Confidence 789999999999752 57999999999983
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=5.6e-37 Score=304.29 Aligned_cols=253 Identities=42% Similarity=0.645 Sum_probs=212.2
Q ss_pred eEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHHH
Q 008890 236 LWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEI 315 (550)
Q Consensus 236 ~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l 315 (550)
.+++++.+|.|+.|||++.+..... ..+..+|+|||||||+..+++|++.+++.|.+.+
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~---------------------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~ 60 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLN---------------------NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCC---------------------CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHH
Confidence 3678889999999999998854210 0256899999999999999999999999998876
Q ss_pred HHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecCCe
Q 008890 316 ELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE 395 (550)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~g~ 395 (550)
..... .....+...|+++|.++++.+....... .....+|||++++++.+++++++|+||||+|++|+++
T Consensus 61 ~~~~~---------~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~ 130 (254)
T cd00143 61 EETLT---------LSEEDIEEALRKAFLRADEEILEEAQDE-PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGE 130 (254)
T ss_pred hhccc---------cchHHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCc
Confidence 43321 1234567889999999999997654321 2335789999999999999999999999999999999
Q ss_pred eeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcccceEEEEeccCCCeEEEEecCCCCC
Q 008890 396 SMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWD 475 (550)
Q Consensus 396 ~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD 475 (550)
++++|.||++.++.++.|+...++... ..+..+...+||++|+..+|+.+..+|++..+.+.+.+++||||||||||
T Consensus 131 ~~~lt~dh~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~ 207 (254)
T cd00143 131 AVQLTKDHKPVNEEERERIEKAGGRVS---NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWD 207 (254)
T ss_pred eeEcCCCCCCcChHHHHHHHHcCCcEE---eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCee
Confidence 999999999999999999999988653 23455678899999999999888999999999985667789999999999
Q ss_pred CCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEe
Q 008890 476 VMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDL 540 (550)
Q Consensus 476 ~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l 540 (550)
++++++|.+++..... ..+++.+|+.|++.|..+++.||+|+|++++
T Consensus 208 ~l~~~~i~~~~~~~~~------------------~~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 208 VLSNQEAVDIVRSELA------------------KEDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred ccChHHHHHHHHHHhc------------------ccCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 9999999999988310 0168899999999999999999999999975
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2e-36 Score=301.56 Aligned_cols=249 Identities=45% Similarity=0.712 Sum_probs=209.4
Q ss_pred eEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHHH
Q 008890 236 LWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEI 315 (550)
Q Consensus 236 ~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l 315 (550)
.+|+++.+|.|..|||++.+...+ ..+..+|+|||||||..+++++++.+.+.+.+..
T Consensus 7 ~~~~~~~~~~r~~neD~~~~~~~~----------------------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~ 64 (255)
T smart00332 7 RYGLSSMQGVRKPMEDAHVITPDL----------------------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEEL 64 (255)
T ss_pred eEEEecCCCCCCCCcceEEEeccC----------------------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhH
Confidence 467788999999999999886431 0267899999999999999999999998887653
Q ss_pred HHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecCCe
Q 008890 316 ELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE 395 (550)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~g~ 395 (550)
..... ....+.+.|++++.+++.++........ ....+|||++++++..+++|++|+||||+|++|+++
T Consensus 65 ~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~ 133 (255)
T smart00332 65 IKHKD----------ELEDVEEALRKAFLKTDEEILEELESLE-EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGK 133 (255)
T ss_pred hhccc----------chhHHHHHHHHHHHHHHHHHHHhhhhcc-CCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCc
Confidence 32111 1134678899999999999976543221 235689999999999999999999999999999999
Q ss_pred eeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcccceEEEEeccCCCeEEEEecCCCCC
Q 008890 396 SMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWD 475 (550)
Q Consensus 396 ~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD 475 (550)
+.+||+||++.++.|..|+...++.+.. ++..+...+||++|+..+|+.++++|++...++.+.+++|||||||||+
T Consensus 134 ~~~lt~dh~~~~~~~~~~i~~~~~~~~~---~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~ 210 (255)
T smart00332 134 AVQLTEDHKPSNEDERARIEAAGGFVIN---GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWD 210 (255)
T ss_pred eeEcCCCCCCcCHHHHHHHHHcCCEEEC---CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCcccc
Confidence 9999999999999999999999998753 3666778999999999999999999999999875667799999999999
Q ss_pred CCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEE
Q 008890 476 VMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVV 538 (550)
Q Consensus 476 ~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV 538 (550)
+++++++.+++.+... ..++..+|+.|.+.|..+++.||+|+|||
T Consensus 211 ~l~~~~i~~~~~~~~~------------------~~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 211 VLSNQEVVDIVRKHLS------------------KSDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred CCCHHHHHHHHHHHhh------------------cCCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 9999999999988321 01578999999999999999999999985
No 10
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1.5e-36 Score=337.29 Aligned_cols=260 Identities=20% Similarity=0.224 Sum_probs=186.7
Q ss_pred ceEEEeecccC-CCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHH
Q 008890 235 PLWGFTSVCGR-RPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAE 313 (550)
Q Consensus 235 ~~~G~~S~~G~-R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~ 313 (550)
..+++.|++|. |++|||++.+...+.+... + .........+|+|||||||+.+|++||+.+++.|.+
T Consensus 375 l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~----------~--~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~ 442 (645)
T PRK14559 375 LEDAGRTDVGRQRHHNEDYFGINTRIQKLEN----------P--HGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQ 442 (645)
T ss_pred EEEEEECCCCCCCcccCCccccccccccccc----------c--cccccccceEEEEEeCCCCchhHHHHHHHHHHHHHH
Confidence 34677888886 9999999877543211000 0 000011357999999999999999999999999987
Q ss_pred HHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCC-CCCCCCCcceEEEEEeCCEEEEeeeCCceEEEe-
Q 008890 314 EIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEP-VAPETVGSTAVVAIICASHIIVANCGDSRAVLC- 391 (550)
Q Consensus 314 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~-~~~~~~GTTavvali~~~~l~vAnVGDSRayL~- 391 (550)
.+...... . . ...+.|+++|..+|+.+........ ....+||||++++++.++++|++||||||+|++
T Consensus 443 ~~~~~~~~---~-~------~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~ 512 (645)
T PRK14559 443 YFQQHWQD---E-L------PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVT 512 (645)
T ss_pred HHHhhhcc---c-c------cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEe
Confidence 76532111 0 0 1246788899999999976432211 133579999999999999999999999999998
Q ss_pred cCCeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcccceEEEEeccCCCeEEEEecC
Q 008890 392 RGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASD 471 (550)
Q Consensus 392 r~g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~~v~~~Pdi~~~~l~~~D~fLILaSD 471 (550)
|+|++++||+||++.+...+.++....+ ..| .+..++||++|+...+. .+|++..+.+.+ |++||||||
T Consensus 513 r~g~l~QLT~DHs~~~~lv~~Gi~~~~a------~~~-p~~~~LTrALG~~~~~~---l~Pdi~~~~L~~-gD~lLLCSD 581 (645)
T PRK14559 513 RKGGLEQLTVDHEVGQREIQRGVEPQIA------YAR-PDAYQLTQALGPRDNSA---IQPDIQFLEIEE-DTLLLLCSD 581 (645)
T ss_pred cCCeEEEeCCCCCHHHHHHHhCCCHHHH------hcC-cccceeeeccCCCCCCc---ccceEEEEEcCC-CCEEEEECC
Confidence 5789999999999876533333211111 112 24578999999875432 479999998765 568999999
Q ss_pred CCCCC--CCH---HHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEeccCCcc
Q 008890 472 GLWDV--MTN---EEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQRKF 546 (550)
Q Consensus 472 GLwD~--Ls~---eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~~~~~~ 546 (550)
||||+ +.. +++..++.. ..+++++|++|++.|+.+|++||||+|||+++.....
T Consensus 582 GL~D~~~ve~~~~~~l~~il~~---------------------~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~~ 640 (645)
T PRK14559 582 GLSDNDLLETHWQTHLLPLLSS---------------------SANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQL 640 (645)
T ss_pred CCCCCcccchHHHHHHHHHHhc---------------------CCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCCC
Confidence 99994 443 233334433 3467889999999999999999999999999877665
Q ss_pred CC
Q 008890 547 KS 548 (550)
Q Consensus 547 k~ 548 (550)
+.
T Consensus 641 ~~ 642 (645)
T PRK14559 641 SL 642 (645)
T ss_pred Cc
Confidence 54
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=301.79 Aligned_cols=231 Identities=31% Similarity=0.436 Sum_probs=184.3
Q ss_pred CCCceEEEEEcCCCCcchhHHHHHHHHHHHHHHHHHHhhhc----cCCc----------------cccchHHHHHHHHHH
Q 008890 282 QQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECL----SDGS----------------VVHSCQEQWKKIFTS 341 (550)
Q Consensus 282 ~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~~~~~~~----~~~~----------------~~~~~~~~~~~~l~~ 341 (550)
+.++.|+||||||||..+++|.++++..++..++....... .+.. ..........++|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 34789999999999999999999999999997765533221 1110 000114667899999
Q ss_pred HHHHHHHHHcccC---CCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEec---CC---eeeeeCCCCCCCCHHHHH
Q 008890 342 CFARVDAEVGGKT---NQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCR---GK---ESMALSVDHKPNREDEYA 412 (550)
Q Consensus 342 af~~ad~~l~~~~---~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r---~g---~~~~LT~DHs~~~~~E~~ 412 (550)
||.++++.+.... ......-..+|+|++++++++..+||||+|||||+|.+ ++ .++|||.||+..++.|+.
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~ 255 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVR 255 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHH
Confidence 9999999985432 12233446799999999999999999999999999964 33 579999999999999999
Q ss_pred HHHHcCCe---eeeeCCccccccccccccccccccC---------------------CCCcccceEEEEeccCCCeEEEE
Q 008890 413 RIEAAGGK---VIQWNGHRVFGVLAMSRSIGDRYLK---------------------PWIIPEPEVMFLPRAREDECLIL 468 (550)
Q Consensus 413 RI~~~gg~---v~~~~~~Rv~g~LavSRsiGd~~lk---------------------~~v~~~Pdi~~~~l~~~D~fLIL 468 (550)
||...+.. +.....+|+.|.|.+||+|||.++| |+++++|.++.++|.+.|.||||
T Consensus 256 Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIl 335 (390)
T KOG0700|consen 256 RIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLIL 335 (390)
T ss_pred HHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEE
Confidence 99987642 2223347999999999999999887 57899999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCC
Q 008890 469 ASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGS 529 (550)
Q Consensus 469 aSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs 529 (550)
+|||||++|+++|+++++..++..- ..-+.+|+.|++.|+.+..
T Consensus 336 ASDGLwE~lsNeeaV~lV~~~i~~~-----------------~pd~~~A~hLIr~aL~~aa 379 (390)
T KOG0700|consen 336 ASDGLWEYLSNEEAVSLVHEFISGK-----------------FPDGNPATHLIRHALGRAA 379 (390)
T ss_pred eccchhhhcChHHHHHHHHHhhccC-----------------CCCCCHHHHHHHHHHhhhh
Confidence 9999999999999999999965310 1124578999999987653
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=2.2e-27 Score=237.70 Aligned_cols=247 Identities=30% Similarity=0.441 Sum_probs=188.4
Q ss_pred CCCceEEEEEcCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc------CCcc-------------------c-cchHHHH
Q 008890 282 QQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLS------DGSV-------------------V-HSCQEQW 335 (550)
Q Consensus 282 ~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~~~~~~~~------~~~~-------------------~-~~~~~~~ 335 (550)
..++++|.+||||.|..++-+|++.+++.+.+.+....+.+. +.++ . -..+..+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 347899999999999999999999999999888765443311 0000 0 0123456
Q ss_pred HHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEEecCCeeeeeCCCCCCCCHHHHHHHH
Q 008890 336 KKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIE 415 (550)
Q Consensus 336 ~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL~r~g~~~~LT~DHs~~~~~E~~RI~ 415 (550)
..+|..||+.+|.+|....+.. ...+|||+++++..-+++|+||.||||++|+|+++++.||++.+|.. ||+|++
T Consensus 221 iGAlEsAFqemDeqiarer~~~---~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ 295 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVW---RLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQ 295 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh---cCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHH
Confidence 7889999999999998765433 34689999999999999999999999999999999999999999875 677776
Q ss_pred HcC--------Ce------------------eee-------e-------------------CCccccccccccccccccc
Q 008890 416 AAG--------GK------------------VIQ-------W-------------------NGHRVFGVLAMSRSIGDRY 443 (550)
Q Consensus 416 ~~g--------g~------------------v~~-------~-------------------~~~Rv~g~LavSRsiGd~~ 443 (550)
..+ +. +.. | ...|+.+.+.+||.+||..
T Consensus 296 ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~ 375 (493)
T KOG1323|consen 296 ELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHH 375 (493)
T ss_pred HHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcce
Confidence 542 11 100 1 1246678899999999986
Q ss_pred c---------CCCCcccceEEEEecc----CCCeEEEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCC
Q 008890 444 L---------KPWIIPEPEVMFLPRA----REDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGID 510 (550)
Q Consensus 444 l---------k~~v~~~Pdi~~~~l~----~~D~fLILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~ 510 (550)
+ ||++++.|+++.+++. ..|+++||+||||||+++++|+..+++.++..+... ..
T Consensus 376 Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~------------Dp 443 (493)
T KOG1323|consen 376 LKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPA------------DP 443 (493)
T ss_pred eeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCC------------Ch
Confidence 5 5789999999999875 346799999999999999999999999975332211 01
Q ss_pred hhHHHHHHHHHHHHHhC-------------CCCCCeEEEEEEeccCCc
Q 008890 511 PAAQAAAEYLSNRALQK-------------GSKDNISVVVVDLKAQRK 545 (550)
Q Consensus 511 ~~~q~aA~~Lv~~Al~~-------------Gs~DNiTVIVV~l~~~~~ 545 (550)
.....+|+.|+..|... |+.|+|||.||-|+...+
T Consensus 444 ~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~~ 491 (493)
T KOG1323|consen 444 SRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCAA 491 (493)
T ss_pred hHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCCCC
Confidence 12346778888777521 578999999999987654
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.86 E-value=2.3e-21 Score=216.08 Aligned_cols=245 Identities=26% Similarity=0.435 Sum_probs=209.3
Q ss_pred ceEEEeecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHH
Q 008890 235 PLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEE 314 (550)
Q Consensus 235 ~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~ 314 (550)
..||++...|.|..+-=+-..+.+|. ....+.||.+||-+-.....+....+..++.++
T Consensus 522 ~t~Gv~~~~gqrnk~c~~~~~v~nf~---------------------~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~ee 580 (1081)
T KOG0618|consen 522 WTYGVAGVSGQRNKVCSRAVWVENFF---------------------LNPQATFGCFDGSRNSRVLSLVQDTMASYLAEE 580 (1081)
T ss_pred eeeccchhcccccchhhhhhhhhhcc---------------------cCCcceEEEEcCCCchhHHHHHHHHHHHHHHHH
Confidence 45899999998877765543333332 236789999999999999999999999999998
Q ss_pred HHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEeC--------CEEEEeeeCCc
Q 008890 315 IELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICA--------SHIIVANCGDS 386 (550)
Q Consensus 315 l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~~--------~~l~vAnVGDS 386 (550)
++...+. .+.|+.+|...++++...+. ..|..++.+.+.. .++++||+|+|
T Consensus 581 v~~~~~e--------------t~~mr~~fl~~~rklg~~g~-------~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c 639 (1081)
T KOG0618|consen 581 VQLYGNE--------------TEQMRNTFLRLNRKLGEEGQ-------VLGGSVVLCQIVEDSLSPASSKTLFAANVGTC 639 (1081)
T ss_pred HHhccCh--------------HHHHHHHHHHHhhhhhhhhc-------cccchhhheeecccccCcccchhhhHhhhccc
Confidence 8765443 34499999999999976543 3455666666643 57999999999
Q ss_pred eEEEecCCeeeeeCCCC-CCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcccceEEEEeccCCCeE
Q 008890 387 RAVLCRGKESMALSVDH-KPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDEC 465 (550)
Q Consensus 387 RayL~r~g~~~~LT~DH-s~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~~v~~~Pdi~~~~l~~~D~f 465 (550)
.++++++|+..++|+-. -...++|.+||...+|++.. ++++.|+...||.+|...+.|++.+.|+|....+.++|+|
T Consensus 640 ~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~e--d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~ 717 (1081)
T KOG0618|consen 640 MAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITE--DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEF 717 (1081)
T ss_pred hhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecC--CCeeeceeeeeeecccccccccccCCCceeeEecccCceE
Confidence 99999999999998665 45589999999999999973 7899999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCCCCCCeEEEEEEeccCC
Q 008890 466 LILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKGSKDNISVVVVDLKAQR 544 (550)
Q Consensus 466 LILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~Gs~DNiTVIVV~l~~~~ 544 (550)
||+++-+||++|+.+++++++++ ..+|-.||++|+++|..+|..||++|+||++....
T Consensus 718 LIvgn~~lW~~Lsid~a~~~vRn---------------------~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 718 LIVGNKQLWSVLSIDTAVDAVRN---------------------VEDPLLAAKKLCDLAQSYGCAENVSVLVVRLNHLE 775 (1081)
T ss_pred EEEcchHHhhhccHHHHHHHHhc---------------------CCchHHHHHHHHHHHHhcccccCeeEEEEEeecch
Confidence 99999999999999999999997 57889999999999999999999999999997654
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.84 E-value=1e-19 Score=183.17 Aligned_cols=204 Identities=21% Similarity=0.242 Sum_probs=132.9
Q ss_pred CceEEEEEcCCCCcchhHHHHHHHHHHHHHHHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCC
Q 008890 284 TAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPET 363 (550)
Q Consensus 284 ~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~ 363 (550)
...+.|||||+|||+--.+-...+...|.....+.... ..... ..+...|..+|.++-++ ..+.-
T Consensus 102 ~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~---~~~~~---~~P~~lL~~ay~~l~~~---------~~~~v 166 (330)
T KOG1379|consen 102 HAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQN---SDFNP---SDPVNLLEKAYAELKSQ---------KVPIV 166 (330)
T ss_pred ccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcc---cccCC---CChHHHHHHHHHHHhhc---------CCCCC
Confidence 56789999999999765554444444444444433221 11111 13466777766555322 12235
Q ss_pred CCcceEEEEEe--CCEEEEeeeCCceEEEecCCeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccc
Q 008890 364 VGSTAVVAIIC--ASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGD 441 (550)
Q Consensus 364 ~GTTavvali~--~~~l~vAnVGDSRayL~r~g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd 441 (550)
++|||+++.+. +++||+||+|||-..++|+|++++-|..+...... .-.......++ ...++|
T Consensus 167 GSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~--------PyQLs~~p~~~-------~~~~~d 231 (330)
T KOG1379|consen 167 GSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNT--------PYQLSSPPEGY-------SSYISD 231 (330)
T ss_pred CcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCC--------ceeeccCCccc-------cccccC
Confidence 78999999998 89999999999999999999999999876432110 00000000000 011111
Q ss_pred cccCCCCcccceEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHH
Q 008890 442 RYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLS 521 (550)
Q Consensus 442 ~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv 521 (550)
..-..+.+.+++.++| +||||||||||+|.+++|..++..... + ....+|..|++|.
T Consensus 232 ------~p~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~-------------~---~~~~lq~~A~~ia 288 (330)
T KOG1379|consen 232 ------VPDSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDA-------------R---GNLDLQVTAQKIA 288 (330)
T ss_pred ------CccccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhc-------------c---ccccHHHHHHHHH
Confidence 1124467888877766 899999999999999999999987321 0 1346788888888
Q ss_pred HHHHhC-----------------------CCCCCeEEEEEEe
Q 008890 522 NRALQK-----------------------GSKDNISVVVVDL 540 (550)
Q Consensus 522 ~~Al~~-----------------------Gs~DNiTVIVV~l 540 (550)
+.|.+. |+.|+|||||..+
T Consensus 289 ~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 289 EKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 887632 4589999999753
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.77 E-value=4.4e-18 Score=165.92 Aligned_cols=188 Identities=21% Similarity=0.282 Sum_probs=104.4
Q ss_pred eecccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHHHHHHh
Q 008890 240 TSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVK 319 (550)
Q Consensus 240 ~S~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~~~~ 319 (550)
.+++|+|..|||++.+... .+..+++||||+||...++.+|+.+++.+.+.+....
T Consensus 3 ~sh~~~~~~nqD~~~~~~~------------------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~ 58 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD------------------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLL 58 (212)
T ss_dssp ----TTSSS--EEEEEE-T------------------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSC
T ss_pred ccccCCCCCCCCCEEeeeC------------------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcc
Confidence 5788999999999986431 2557779999999999999999999999988876543
Q ss_pred hhccCCccccchHHHHHHHHHHHHHHHHHHH--cccCCCCCCCCCCCCcceEEEEEeCCEEEEeeeCCceEEE-ecCCee
Q 008890 320 ECLSDGSVVHSCQEQWKKIFTSCFARVDAEV--GGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVL-CRGKES 396 (550)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l--~~~~~~~~~~~~~~GTTavvali~~~~l~vAnVGDSRayL-~r~g~~ 396 (550)
.. ......+..++.+..++...+ .............++||++++++.++.++++|+||||+|+ .++|++
T Consensus 59 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~ 130 (212)
T PF13672_consen 59 SQ--------ESPSSIEALIRAIKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEI 130 (212)
T ss_dssp CC--------HHHHHHHHHHHHHHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEE
T ss_pred cc--------cchHHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEE
Confidence 22 111102222222222222111 0000000112346799999999999999999999999965 589999
Q ss_pred eeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcccceEEEEeccCCCeEEEEecCCCCCC
Q 008890 397 MALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDV 476 (550)
Q Consensus 397 ~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD~ 476 (550)
.+++.||+. +..+ . ++.+..... ....++..+++.+++ .|+|||||||+.
T Consensus 131 ~~l~~~~~~----~~~~---~------------------~~~~~~~~~----~~~~~~~~~~~~~~d-~ilL~SDG~~~~ 180 (212)
T PF13672_consen 131 QQLTDDHSG----EYPN---Q------------------TRSLTGDDP----EPDVQYGSIPLEEGD-VILLCSDGVWDN 180 (212)
T ss_dssp EE-S---BH----HHHH---C------------------TTSCCHHCC----CTETEEEEEE--TT--EEEEE-HHHHTT
T ss_pred EEcCCCccc----hhhh---h------------------hhccCcccc----ccCCeEEEEEcCCCC-EEEEECcCcccc
Confidence 999999961 1111 0 122222211 112255566644444 688899999999
Q ss_pred CCHHH-HHHHHHHh
Q 008890 477 MTNEE-ACELARKR 489 (550)
Q Consensus 477 Ls~ee-I~~iv~~~ 489 (550)
+...+ +..++...
T Consensus 181 l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 181 LRSYEDLEQFLKDL 194 (212)
T ss_dssp S-HHHHHHHH----
T ss_pred CCCHHHHHHHhhhc
Confidence 98765 66666653
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.67 E-value=4.6e-15 Score=142.54 Aligned_cols=161 Identities=18% Similarity=0.140 Sum_probs=119.0
Q ss_pred CceEEEEEcCCCCcchhHHHHHHHHHHHHHHHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCC
Q 008890 284 TAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPET 363 (550)
Q Consensus 284 ~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~ 363 (550)
+..+|+|+||||+...|.+++..+...+.+.+... ..+.+.+.++|+.+.... ...
T Consensus 29 ~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~------------------~~~~~~l~~~n~~l~~~~------~~~ 84 (193)
T smart00331 29 GRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG------------------ISLSQILERLNRAIYENG------EDG 84 (193)
T ss_pred CeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC------------------CCHHHHHHHHHHHHHhcC------CCC
Confidence 57899999999999999999999998887654321 123445566777776541 235
Q ss_pred CCcceEEEEE--eCCEEEEeeeCCceEEEec-CCeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCcccccccccccccc
Q 008890 364 VGSTAVVAII--CASHIIVANCGDSRAVLCR-GKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIG 440 (550)
Q Consensus 364 ~GTTavvali--~~~~l~vAnVGDSRayL~r-~g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiG 440 (550)
+|+|++++++ ..++++++|+||+|+|+++ ++...+++.+.+ +.+|
T Consensus 85 ~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~--------------------------------~~lG 132 (193)
T smart00331 85 MFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG--------------------------------APLG 132 (193)
T ss_pred cEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC--------------------------------ceee
Confidence 8999999998 6789999999999999998 666666666521 3444
Q ss_pred ccccCCCCcccceEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHH
Q 008890 441 DRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYL 520 (550)
Q Consensus 441 d~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~L 520 (550)
.... .+++...+++.++| .|+|+|||||+.++.+++.+++++.. ..+++.++++|
T Consensus 133 ~~~~-----~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~l~~~l~~~~-------------------~~~~~~~~~~i 187 (193)
T smart00331 133 LEPD-----VEVDVRELTLEPGD-LLLLYTDGLTEARNPERLEELLEELL-------------------GSPPAEIAQRI 187 (193)
T ss_pred eCCC-----CcceeEEEeeCCCC-EEEEECCCccccCChHHHHHHHHHhc-------------------CCCHHHHHHHH
Confidence 3321 23566777766666 68889999999999999999888732 24577888888
Q ss_pred HHHHH
Q 008890 521 SNRAL 525 (550)
Q Consensus 521 v~~Al 525 (550)
.+...
T Consensus 188 ~~~~~ 192 (193)
T smart00331 188 LEELL 192 (193)
T ss_pred HHHHh
Confidence 77653
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.48 E-value=2e-12 Score=148.89 Aligned_cols=194 Identities=16% Similarity=0.140 Sum_probs=135.6
Q ss_pred cccCCCCCceeEEEccCccccchhhcccccccCCcccccCCCCceEEEEEcCCCCcchhHHHHHHHHHHHHHHHHHHhhh
Q 008890 242 VCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKEC 321 (550)
Q Consensus 242 ~~G~R~~nEDa~~v~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~~~~~~ 321 (550)
.++.+..+.|.|.+.+. .++..+++|+||||....|..++..+.+.+.+.+....+
T Consensus 560 ~k~g~~vsGD~y~~~~l-----------------------~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~- 615 (764)
T TIGR02865 560 AKDGELVSGDSYSFGKL-----------------------SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD- 615 (764)
T ss_pred cCCCCcccCceEEEEEE-----------------------CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC-
Confidence 34557788888866431 125578999999998888888888888877654321100
Q ss_pred ccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCcceEEEEEe--CCEEEEeeeCCceEEEecCCeeeee
Q 008890 322 LSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIIC--ASHIIVANCGDSRAVLCRGKESMAL 399 (550)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~~GTTavvali~--~~~l~vAnVGDSRayL~r~g~~~~L 399 (550)
...++..+|+.+.... ...+.+|+.+++++ .+++.++|+|+++.|+.|+++..++
T Consensus 616 -----------------~~~ai~~lN~~L~~~~------~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i 672 (764)
T TIGR02865 616 -----------------REVAIKTVNSILSLRS------TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVI 672 (764)
T ss_pred -----------------HHHHHHHHHHHHHhCC------CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEe
Confidence 1345566777665331 12468999999885 6899999999999999999998888
Q ss_pred CCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcccceEEEEeccCCCeEEEEecCCCCCCCCH
Q 008890 400 SVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTN 479 (550)
Q Consensus 400 T~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsiGd~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD~Ls~ 479 (550)
+..+.| +|-. ...+++....++.++| +|+|+|||+||..++
T Consensus 673 ~s~~lP---------------------------------lGil-----~~~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~ 713 (764)
T TIGR02865 673 RSSNLP---------------------------------IGIL-----DEVDVELVRKKLKNGD-LIVMVSDGVLEGEKE 713 (764)
T ss_pred cCCCce---------------------------------eEec-----cCCccceEEEEeCCCC-EEEEECCCCCcCCcc
Confidence 754432 1211 0124566666766665 799999999998875
Q ss_pred HH-----HHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhCC---CCCCeEEEEEEe
Q 008890 480 EE-----ACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQKG---SKDNISVVVVDL 540 (550)
Q Consensus 480 ee-----I~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~G---s~DNiTVIVV~l 540 (550)
.+ +.+++++. ...+|+++++.|++.+++.. ..||+|++++++
T Consensus 714 ~~~~~~~l~~~l~~~-------------------~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 714 VEGKVLWLVRKLKET-------------------NTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred cccHHHHHHHHHHhc-------------------CCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 43 45555431 03468999999999998653 379999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.21 E-value=2.4e-09 Score=102.46 Aligned_cols=177 Identities=20% Similarity=0.178 Sum_probs=112.6
Q ss_pred CceEEEEEcCCCCcchhHHHHHHHHHHHHHHHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCC
Q 008890 284 TAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPET 363 (550)
Q Consensus 284 ~~~lfgVaDGhGG~~~g~~As~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~~ 363 (550)
+..++.|+|++|-.-.|.+.+..+...+......... ....+..+|+.+...... ..
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~------------------p~~~l~~ln~~l~~~~~~-----~~ 59 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD------------------PEELLEALNRRLYRDLKG-----DN 59 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS------------------HHHHHHHHHHHHHHHTTT-----TS
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC------------------HHHHHHHHHHHHHHHhhh-----cc
Confidence 6688999999997777777777777777665421110 333445566666332211 13
Q ss_pred CCcceEEEEEe--CCEEEEeeeCCceEEEecC--CeeeeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccc
Q 008890 364 VGSTAVVAIIC--ASHIIVANCGDSRAVLCRG--KESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSI 439 (550)
Q Consensus 364 ~GTTavvali~--~~~l~vAnVGDSRayL~r~--g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSRsi 439 (550)
..+|++++++. .++++++|+|+++++++|+ +....+.....| +
T Consensus 60 ~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~---------------------------------l 106 (193)
T PF07228_consen 60 RYATACYAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEGPP---------------------------------L 106 (193)
T ss_dssp TTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSSBB---------------------------------C
T ss_pred ccceEEEEEecccceEEEEeCCCCCCEEEEeccccceeecccCccc---------------------------------e
Confidence 67888888875 5789999999999999998 334444333211 1
Q ss_pred cccccCCCCcccceEEEEeccCCCeEEEEecCCCCCCCCHHH-------HHHHHHHhhhhhhcccCcccccCCCCCCChh
Q 008890 440 GDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEE-------ACELARKRILLWHKKNGVTLATGRGEGIDPA 512 (550)
Q Consensus 440 Gd~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD~Ls~ee-------I~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~ 512 (550)
|-.. ...+....+.+.++| .|+|+||||+|....+. +.+++.+. ...+
T Consensus 107 G~~~-----~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~-------------------~~~~ 161 (193)
T PF07228_consen 107 GIFE-----DIDYQEQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDEN-------------------RGLS 161 (193)
T ss_dssp SSSC-----TTCEEEEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH-------------------TTS-
T ss_pred eeec-----cccccceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhc-------------------cCCC
Confidence 2111 123445566655555 79999999999985443 23444431 0346
Q ss_pred HHHHHHHHHHHHHhC---CCCCCeEEEEEEec
Q 008890 513 AQAAAEYLSNRALQK---GSKDNISVVVVDLK 541 (550)
Q Consensus 513 ~q~aA~~Lv~~Al~~---Gs~DNiTVIVV~l~ 541 (550)
++++++.|++.+... ...||+|+++++++
T Consensus 162 ~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 162 PQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 889999999998873 46899999999873
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=97.67 E-value=0.0033 Score=67.00 Aligned_cols=176 Identities=16% Similarity=0.124 Sum_probs=107.3
Q ss_pred CceEEEEEcCCC-CcchhHHHHHHHHHHHHHHHHHHhhhccCCccccchHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC
Q 008890 284 TAHFFGVYDGHG-GLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPE 362 (550)
Q Consensus 284 ~~~lfgVaDGhG-G~~~g~~As~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~af~~ad~~l~~~~~~~~~~~~ 362 (550)
....++|.|.+| |-.++-. .......+ +.+.... . .--...+..+|+.+..... .
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~-m~~~~~~~-~~~~~~~-~---------------~~p~~~l~~~n~~~~~~~~------~ 229 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALL-MLMPKLAL-RLLLESG-P---------------LDPADVLETLNRVLKQNLE------E 229 (367)
T ss_pred cEEEEEEEeccCCCHHHHHH-HHHHHHHH-HHhhhcc-c---------------CCHHHHHHHHHHHHHhccc------C
Confidence 567889999999 6665555 33332222 2221110 0 0112334456666654332 1
Q ss_pred CCCcceEEEEEe--CCEEEEeeeCCceEEEecCCee---eeeCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccc
Q 008890 363 TVGSTAVVAIIC--ASHIIVANCGDSRAVLCRGKES---MALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSR 437 (550)
Q Consensus 363 ~~GTTavvali~--~~~l~vAnVGDSRayL~r~g~~---~~LT~DHs~~~~~E~~RI~~~gg~v~~~~~~Rv~g~LavSR 437 (550)
.+=+|....+++ ...+..+|+|---.++++.+.. ..|..- .+
T Consensus 230 ~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~~---------------------------------g~ 276 (367)
T COG2208 230 DMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTAL---------------------------------GL 276 (367)
T ss_pred CcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccCC---------------------------------Cc
Confidence 267788887775 5789999999999888876532 222211 13
Q ss_pred cccccccCCCCcccceEEEEeccCCCeEEEEecCCCCC-------CCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCC
Q 008890 438 SIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWD-------VMTNEEACELARKRILLWHKKNGVTLATGRGEGID 510 (550)
Q Consensus 438 siGd~~lk~~v~~~Pdi~~~~l~~~D~fLILaSDGLwD-------~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~ 510 (550)
.+|...- ..+.+....+.+ ++.|+|.|||+++ .+..+...+++.+.. .
T Consensus 277 piG~~~~-----~~~~~~~~~l~~-gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~-------------------~ 331 (367)
T COG2208 277 PIGLLPD-----YQYEVASLQLEP-GDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLL-------------------G 331 (367)
T ss_pred eeeecCC-----ccchheeEEecC-CCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHh-------------------C
Confidence 3343211 234455566666 5589999999998 567777777777521 3
Q ss_pred hhHHHHHHHHHHHHHhC----CCCCCeEEEEEEec
Q 008890 511 PAAQAAAEYLSNRALQK----GSKDNISVVVVDLK 541 (550)
Q Consensus 511 ~~~q~aA~~Lv~~Al~~----Gs~DNiTVIVV~l~ 541 (550)
.+++++++.+.+...+. .-.||+|+++++++
T Consensus 332 ~~~~e~~~~i~~~l~~~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 332 QPAEEILEAILESLEELQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred CCHHHHHHHHHHHHHHhhCCccccCceEEEEEEec
Confidence 46777777777776543 24688999999875
No 20
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=21.46 E-value=6.4e+02 Score=23.40 Aligned_cols=69 Identities=13% Similarity=0.057 Sum_probs=43.3
Q ss_pred cCCCeEEEEecCCCCCCCCHHHHHHHHHHhhhhhhcccCcccccCCCCCCChhHHHHHHHHHHHHHhC-CCCCCeEEEEE
Q 008890 460 AREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGIDPAAQAAAEYLSNRALQK-GSKDNISVVVV 538 (550)
Q Consensus 460 ~~~D~fLILaSDGLwD~Ls~eeI~~iv~~~i~~~~~~~~~~~~~~~~~~~~~~~q~aA~~Lv~~Al~~-Gs~DNiTVIVV 538 (550)
.+++.++++..||.-.-+....+...+...+..+... ...+..+.+.+-+..... ....-+|++++
T Consensus 26 ~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~-------------~~~~~~~l~~~n~~l~~~~~~~~~~T~~~~ 92 (193)
T smart00331 26 LPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSE-------------GISLSQILERLNRAIYENGEDGMFATLFLA 92 (193)
T ss_pred eCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhc-------------CCCHHHHHHHHHHHHHhcCCCCcEEEEEEE
Confidence 3455678889999998888777777766654332211 123566666665554444 34456788887
Q ss_pred Eec
Q 008890 539 DLK 541 (550)
Q Consensus 539 ~l~ 541 (550)
.+.
T Consensus 93 ~id 95 (193)
T smart00331 93 LYD 95 (193)
T ss_pred EEE
Confidence 774
Done!