Query 008893
Match_columns 549
No_of_seqs 521 out of 4482
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 14:10:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008893.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008893hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 4.4E-56 1.5E-60 439.8 17.5 253 228-500 27-303 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 7.6E-56 2.6E-60 436.2 14.0 253 227-500 13-286 (299)
3 4aoj_A High affinity nerve gro 100.0 3.3E-55 1.1E-59 437.6 17.8 253 227-500 41-316 (329)
4 3omv_A RAF proto-oncogene seri 100.0 1.1E-54 3.9E-59 427.9 18.6 257 226-500 35-297 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-53 6.4E-58 423.3 18.9 250 227-500 58-313 (336)
6 4fih_A Serine/threonine-protei 100.0 4.7E-53 1.6E-57 421.6 21.4 249 227-496 74-323 (346)
7 4b9d_A Serine/threonine-protei 100.0 6.4E-54 2.2E-58 428.5 14.9 250 227-497 24-277 (350)
8 4ase_A Vascular endothelial gr 100.0 6.2E-54 2.1E-58 431.8 14.6 264 218-500 55-344 (353)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.7E-54 2.3E-58 421.4 14.0 248 227-495 32-283 (311)
10 3fpq_A Serine/threonine-protei 100.0 1.3E-52 4.4E-57 410.3 20.4 247 230-496 29-282 (290)
11 3hyh_A Carbon catabolite-derep 100.0 1.6E-52 5.6E-57 406.0 19.3 246 227-496 13-262 (275)
12 3hmm_A TGF-beta receptor type- 100.0 1.7E-52 5.8E-57 414.9 17.7 265 227-500 3-294 (303)
13 4fie_A Serine/threonine-protei 100.0 1E-51 3.6E-56 421.9 22.6 249 227-496 151-400 (423)
14 3uim_A Brassinosteroid insensi 100.0 2.1E-51 7.3E-56 413.0 20.9 313 203-515 6-323 (326)
15 3ubd_A Ribosomal protein S6 ki 100.0 8.1E-53 2.8E-57 413.7 9.5 243 227-491 24-271 (304)
16 4g31_A Eukaryotic translation 100.0 4.8E-51 1.7E-55 402.6 13.2 249 227-497 5-280 (299)
17 4b99_A Mitogen-activated prote 100.0 8.6E-49 2.9E-53 401.2 15.2 267 227-497 54-345 (398)
18 4f9c_A Cell division cycle 7-r 100.0 1.2E-47 4.1E-52 388.5 19.0 199 225-432 19-251 (361)
19 2qkw_B Protein kinase; three-h 100.0 9.7E-47 3.3E-51 378.2 22.3 278 218-500 30-312 (321)
20 3v5w_A G-protein coupled recep 100.0 9.7E-47 3.3E-51 402.1 18.0 249 227-496 189-449 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 2.1E-46 7.2E-51 401.9 17.6 251 227-497 157-411 (573)
22 3zgw_A Maternal embryonic leuc 100.0 2.5E-45 8.5E-50 370.8 16.1 251 226-497 9-261 (347)
23 2nru_A Interleukin-1 receptor- 100.0 2.1E-43 7.2E-48 351.5 28.9 279 213-500 11-303 (307)
24 2psq_A Fibroblast growth facto 100.0 1.3E-44 4.6E-49 369.6 18.4 255 226-500 80-361 (370)
25 3fxz_A Serine/threonine-protei 100.0 1.3E-43 4.4E-48 351.5 24.4 251 226-497 19-270 (297)
26 4euu_A Serine/threonine-protei 100.0 1.6E-43 5.4E-48 354.5 24.2 272 227-503 9-309 (319)
27 3fe3_A MAP/microtubule affinit 100.0 1.5E-44 5E-49 362.9 16.6 249 226-497 14-265 (328)
28 3s95_A LIMK-1, LIM domain kina 100.0 7E-44 2.4E-48 355.6 21.3 253 227-500 10-279 (310)
29 3p86_A Serine/threonine-protei 100.0 3.4E-44 1.2E-48 357.6 18.7 256 224-500 34-295 (309)
30 3kul_A Ephrin type-A receptor 100.0 2E-44 6.7E-49 362.0 16.8 254 227-500 49-310 (325)
31 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.9E-44 1.3E-48 349.7 18.2 254 226-501 7-262 (268)
32 4hcu_A Tyrosine-protein kinase 100.0 2.6E-44 8.8E-49 351.2 16.4 252 227-500 10-263 (269)
33 2c30_A Serine/threonine-protei 100.0 5.4E-43 1.8E-47 350.9 26.2 262 215-497 23-295 (321)
34 3tki_A Serine/threonine-protei 100.0 3.6E-44 1.2E-48 359.7 17.2 253 227-497 7-262 (323)
35 3vhe_A Vascular endothelial gr 100.0 1E-44 3.5E-49 369.3 13.1 265 217-500 12-352 (359)
36 4eqm_A Protein kinase; transfe 100.0 5.2E-44 1.8E-48 353.8 17.6 259 227-501 11-273 (294)
37 2qol_A Ephrin receptor; recept 100.0 3E-44 1E-48 367.3 16.1 254 227-500 45-306 (373)
38 4aw2_A Serine/threonine-protei 100.0 2.3E-44 7.9E-49 374.1 14.8 264 218-497 65-339 (437)
39 3cbl_A C-FES, proto-oncogene t 100.0 1.4E-44 4.9E-49 370.5 13.0 255 226-500 113-371 (377)
40 2yab_A Death-associated protei 100.0 7.9E-43 2.7E-47 354.6 25.1 253 226-497 11-273 (361)
41 3soc_A Activin receptor type-2 100.0 2.9E-44 1E-48 360.3 14.3 266 226-500 23-315 (322)
42 3gen_A Tyrosine-protein kinase 100.0 5.8E-44 2E-48 351.3 15.5 253 226-500 23-277 (283)
43 1o6l_A RAC-beta serine/threoni 100.0 1.3E-43 4.4E-48 357.1 18.1 249 227-497 5-261 (337)
44 3niz_A Rhodanese family protei 100.0 1.2E-43 4.1E-48 354.1 17.4 264 226-497 20-301 (311)
45 3poz_A Epidermal growth factor 100.0 1E-43 3.6E-48 357.1 16.9 254 227-501 15-276 (327)
46 1rjb_A FL cytokine receptor; k 100.0 8E-44 2.7E-48 360.5 16.1 258 224-500 42-331 (344)
47 2ivs_A Proto-oncogene tyrosine 100.0 1.4E-43 4.9E-48 353.8 16.8 256 225-500 21-308 (314)
48 3tt0_A Basic fibroblast growth 100.0 1.6E-43 5.4E-48 363.5 17.3 255 226-500 68-349 (382)
49 2y0a_A Death-associated protei 100.0 2.2E-43 7.5E-48 354.5 17.8 252 227-497 11-272 (326)
50 1mp8_A Focal adhesion kinase 1 100.0 1.5E-43 5.1E-48 348.1 16.2 254 226-500 14-273 (281)
51 3o0g_A Cell division protein k 100.0 4.6E-43 1.6E-47 346.6 19.1 265 227-497 2-283 (292)
52 3q4u_A Activin receptor type-1 100.0 4.8E-43 1.6E-47 347.8 19.2 260 226-500 7-299 (301)
53 1qcf_A Haematopoetic cell kina 100.0 1.1E-43 3.7E-48 373.0 15.2 257 222-501 183-442 (454)
54 1luf_A Muscle-specific tyrosin 100.0 1.4E-43 4.8E-48 358.5 15.5 257 225-501 45-333 (343)
55 2pmi_A Negative RE, cyclin-dep 100.0 3.1E-43 1.1E-47 352.1 17.6 262 226-496 4-293 (317)
56 4dc2_A Protein kinase C IOTA t 100.0 5.6E-43 1.9E-47 359.0 19.9 252 226-491 51-307 (396)
57 1ob3_A PFPK5, cell division co 100.0 2.6E-43 9E-48 347.7 16.8 262 227-496 2-280 (288)
58 3txo_A PKC-L, NPKC-ETA, protei 100.0 1E-43 3.5E-48 360.2 13.9 250 225-496 21-280 (353)
59 3v8s_A RHO-associated protein 100.0 4E-43 1.4E-47 362.0 18.4 264 220-501 62-334 (410)
60 1opk_A P150, C-ABL, proto-onco 100.0 3.4E-43 1.1E-47 372.8 18.4 256 225-502 218-477 (495)
61 1t46_A HOMO sapiens V-KIT hard 100.0 2.9E-43 1E-47 351.3 16.6 256 226-500 22-304 (313)
62 3l9p_A Anaplastic lymphoma kin 100.0 8.2E-44 2.8E-48 363.5 12.9 254 227-500 71-342 (367)
63 1fot_A TPK1 delta, CAMP-depend 100.0 5.5E-43 1.9E-47 349.9 18.5 246 227-497 6-259 (318)
64 3ork_A Serine/threonine protei 100.0 5.8E-43 2E-47 349.2 18.4 253 227-496 12-273 (311)
65 3qd2_B Eukaryotic translation 100.0 5.2E-43 1.8E-47 352.3 17.9 250 226-497 5-326 (332)
66 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.4E-43 8.2E-48 354.8 15.2 246 227-496 9-258 (336)
67 4fr4_A YANK1, serine/threonine 100.0 7.5E-43 2.6E-47 356.9 18.9 250 227-496 15-271 (384)
68 3ugc_A Tyrosine-protein kinase 100.0 3.4E-43 1.2E-47 348.0 15.7 262 227-500 10-288 (295)
69 1tki_A Titin; serine kinase, m 100.0 1.9E-42 6.6E-47 346.7 21.2 251 226-497 4-258 (321)
70 1qpc_A LCK kinase; alpha beta 100.0 3.3E-43 1.1E-47 345.2 14.8 253 225-500 11-266 (279)
71 3t9t_A Tyrosine-protein kinase 100.0 4.9E-43 1.7E-47 341.5 15.9 252 227-500 8-261 (267)
72 3lb7_A RAF proto-oncogene seri 100.0 3.7E-42 1.3E-46 342.6 22.5 257 226-500 35-297 (307)
73 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.8E-43 1.7E-47 367.6 16.8 255 224-501 181-438 (452)
74 3dtc_A Mitogen-activated prote 100.0 1E-42 3.6E-47 340.0 17.9 253 227-500 7-270 (271)
75 3soa_A Calcium/calmodulin-depe 100.0 9.3E-43 3.2E-47 363.3 18.6 255 225-497 9-268 (444)
76 2zv2_A Calcium/calmodulin-depe 100.0 9.3E-43 3.2E-47 345.5 17.7 249 227-496 13-292 (298)
77 2bdw_A Hypothetical protein K1 100.0 3.7E-42 1.3E-46 350.3 22.5 253 226-497 28-285 (362)
78 3kex_A Receptor tyrosine-prote 100.0 2.9E-43 9.8E-48 353.6 14.0 254 227-501 13-274 (325)
79 3lxp_A Non-receptor tyrosine-p 100.0 4.2E-43 1.5E-47 351.3 15.2 266 229-500 33-307 (318)
80 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.7E-43 3E-47 353.1 17.5 246 227-497 41-294 (350)
81 3kfa_A Tyrosine-protein kinase 100.0 2.3E-43 8E-48 347.8 12.9 254 225-500 11-268 (288)
82 4e5w_A Tyrosine-protein kinase 100.0 3.1E-43 1.1E-47 349.4 13.8 261 227-500 21-299 (302)
83 2pvf_A Fibroblast growth facto 100.0 9.1E-43 3.1E-47 351.3 17.3 255 226-500 34-315 (334)
84 1k9a_A Carboxyl-terminal SRC k 100.0 1.4E-42 4.7E-47 364.0 19.3 248 225-500 191-442 (450)
85 1xjd_A Protein kinase C, theta 100.0 2.9E-43 1E-47 355.5 13.7 251 224-496 14-269 (345)
86 3cc6_A Protein tyrosine kinase 100.0 7.7E-43 2.6E-47 343.0 16.2 254 226-500 11-270 (281)
87 3a8x_A Protein kinase C IOTA t 100.0 2.8E-42 9.5E-47 348.8 20.5 251 227-491 9-264 (345)
88 3uc3_A Serine/threonine-protei 100.0 7.9E-43 2.7E-47 355.3 16.6 253 226-497 19-275 (361)
89 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-42 5E-47 348.3 18.3 251 232-497 16-271 (325)
90 2izr_A Casein kinase I isoform 100.0 4.3E-42 1.5E-46 345.8 21.5 257 226-500 8-278 (330)
91 2vd5_A DMPK protein; serine/th 100.0 1.6E-43 5.5E-48 365.2 11.1 264 217-497 51-328 (412)
92 2xir_A Vascular endothelial gr 100.0 5.4E-43 1.9E-47 349.9 14.5 264 218-500 18-307 (316)
93 3a62_A Ribosomal protein S6 ki 100.0 1.1E-42 3.9E-47 349.4 16.9 250 226-497 16-277 (327)
94 4f0f_A Serine/threonine-protei 100.0 2.9E-42 1E-46 339.9 19.4 252 226-500 18-286 (287)
95 3dbq_A Dual specificity protei 100.0 8E-43 2.7E-47 353.1 15.7 252 226-497 8-274 (343)
96 1csn_A Casein kinase-1; phosph 100.0 1.1E-41 3.7E-46 337.5 23.6 258 226-500 9-280 (298)
97 2w4o_A Calcium/calmodulin-depe 100.0 1.2E-42 4E-47 352.4 17.0 251 226-497 52-306 (349)
98 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-42 4.2E-47 346.8 16.7 244 227-496 57-304 (311)
99 2i1m_A Macrophage colony-stimu 100.0 5E-43 1.7E-47 353.0 13.9 259 223-500 42-323 (333)
100 4eut_A Serine/threonine-protei 100.0 2.8E-42 9.5E-47 355.9 19.8 266 227-500 9-306 (396)
101 2eue_A Carbon catabolite derep 100.0 1.9E-42 6.5E-47 339.1 17.0 246 227-496 13-262 (275)
102 3kmu_A ILK, integrin-linked ki 100.0 1.6E-42 5.4E-47 338.4 16.2 248 227-500 10-267 (271)
103 1kob_A Twitchin; kinase, intra 100.0 2.8E-42 9.6E-47 353.7 18.7 252 226-497 50-305 (387)
104 3dls_A PAS domain-containing s 100.0 9.1E-43 3.1E-47 351.2 14.8 244 225-497 22-275 (335)
105 3c0i_A Peripheral plasma membr 100.0 1.5E-41 5.2E-46 344.7 23.8 252 227-497 24-287 (351)
106 3qup_A Tyrosine-protein kinase 100.0 1.4E-42 4.7E-47 348.3 16.0 256 225-500 21-295 (323)
107 4agu_A Cyclin-dependent kinase 100.0 2.5E-42 8.5E-47 344.4 17.7 267 227-497 3-285 (311)
108 3lzb_A Epidermal growth factor 100.0 2.2E-42 7.4E-47 347.4 17.2 254 227-501 15-276 (327)
109 2i0e_A Protein kinase C-beta I 100.0 1.6E-42 5.5E-47 351.2 16.3 251 225-497 18-277 (353)
110 4ejn_A RAC-alpha serine/threon 100.0 9.7E-43 3.3E-47 365.1 15.2 251 226-498 147-406 (446)
111 1p4o_A Insulin-like growth fac 100.0 4.7E-43 1.6E-47 351.4 12.3 264 218-501 16-297 (322)
112 1u59_A Tyrosine-protein kinase 100.0 2.8E-42 9.7E-47 340.1 17.3 253 227-500 9-269 (287)
113 2yex_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46 337.4 17.6 253 226-496 6-261 (276)
114 1xbb_A Tyrosine-protein kinase 100.0 1.3E-42 4.5E-47 343.1 14.7 254 226-500 15-276 (291)
115 2a2a_A Death-associated protei 100.0 2E-41 6.7E-46 339.6 23.5 253 226-497 11-273 (321)
116 2zmd_A Dual specificity protei 100.0 2E-42 7E-47 355.9 16.6 251 227-497 56-321 (390)
117 3is5_A Calcium-dependent prote 100.0 1.1E-41 3.8E-46 335.5 20.7 249 227-496 22-278 (285)
118 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-42 4E-47 353.4 14.1 257 227-500 54-325 (355)
119 3gni_B Strad alpha; kinase fol 100.0 5.4E-42 1.8E-46 353.1 19.2 266 226-497 24-334 (389)
120 2y94_A 5'-AMP-activated protei 100.0 3E-42 1E-46 361.8 17.6 248 227-497 16-267 (476)
121 3lxl_A Tyrosine-protein kinase 100.0 8.5E-43 2.9E-47 350.5 12.9 269 227-501 23-301 (327)
122 3op5_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46 351.5 17.2 264 226-500 34-326 (364)
123 2acx_A G protein-coupled recep 100.0 3.8E-42 1.3E-46 366.0 18.2 253 226-497 183-445 (576)
124 1mqb_A Ephrin type-A receptor 100.0 3.7E-42 1.3E-46 346.7 17.2 254 227-500 44-306 (333)
125 3kk8_A Calcium/calmodulin depe 100.0 5.5E-42 1.9E-46 337.3 18.0 252 226-496 5-261 (284)
126 2h34_A Serine/threonine-protei 100.0 1.4E-41 4.9E-46 338.7 21.1 258 226-501 33-294 (309)
127 3fdn_A Serine/threonine-protei 100.0 2.9E-42 9.8E-47 338.5 15.6 248 226-497 8-258 (279)
128 3g33_A Cell division protein k 100.0 3.2E-42 1.1E-46 343.2 16.1 263 225-496 7-296 (308)
129 2ozo_A Tyrosine-protein kinase 100.0 5.5E-42 1.9E-46 372.0 19.3 246 234-500 343-595 (613)
130 3pls_A Macrophage-stimulating 100.0 8.6E-42 2.9E-46 338.2 18.7 254 228-500 22-284 (298)
131 1nxk_A MAP kinase-activated pr 100.0 1.8E-41 6.3E-46 349.8 21.4 250 227-497 61-322 (400)
132 2v62_A Serine/threonine-protei 100.0 5.5E-42 1.9E-46 347.2 17.2 266 227-503 37-328 (345)
133 2h8h_A Proto-oncogene tyrosine 100.0 1.8E-42 6.2E-47 370.5 14.3 256 223-501 263-521 (535)
134 2r5t_A Serine/threonine-protei 100.0 3.9E-42 1.4E-46 350.8 16.0 253 227-501 38-294 (373)
135 3uzp_A CKI-delta, CKID, casein 100.0 9.3E-41 3.2E-45 330.5 25.5 258 226-500 8-277 (296)
136 3gxj_A TGF-beta receptor type- 100.0 3.9E-43 1.3E-47 348.7 8.1 256 227-502 3-296 (303)
137 4hgt_A Casein kinase I isoform 100.0 8.5E-41 2.9E-45 330.7 24.9 259 225-500 7-277 (296)
138 1fvr_A Tyrosine-protein kinase 100.0 4.4E-42 1.5E-46 345.3 15.9 252 227-500 25-297 (327)
139 2qr7_A Ribosomal protein S6 ki 100.0 4.4E-42 1.5E-46 346.9 15.9 252 226-497 21-278 (342)
140 3c1x_A Hepatocyte growth facto 100.0 3.6E-42 1.2E-46 351.7 15.4 253 228-500 90-352 (373)
141 3mdy_A Bone morphogenetic prot 100.0 4.3E-41 1.5E-45 339.3 23.0 266 222-500 32-328 (337)
142 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.9E-42 9.9E-47 346.9 13.8 263 226-496 33-318 (329)
143 3bhy_A Death-associated protei 100.0 6.3E-42 2.2E-46 336.7 15.9 251 227-496 5-265 (283)
144 3og7_A AKAP9-BRAF fusion prote 100.0 7.5E-42 2.6E-46 337.4 16.5 259 225-501 22-286 (289)
145 3f3z_A Calcium/calmodulin-depe 100.0 5.3E-41 1.8E-45 329.1 22.3 250 226-496 8-261 (277)
146 3a7i_A MST3 kinase, serine/thr 100.0 1.6E-41 5.3E-46 337.4 18.6 249 227-497 22-271 (303)
147 3hko_A Calcium/calmodulin-depe 100.0 2E-41 7E-46 342.9 19.8 258 223-497 22-331 (345)
148 4fvq_A Tyrosine-protein kinase 100.0 2.5E-42 8.7E-47 340.6 12.8 250 227-503 8-275 (289)
149 2eva_A TAK1 kinase - TAB1 chim 100.0 9.3E-42 3.2E-46 339.8 16.9 249 227-500 8-260 (307)
150 3oz6_A Mitogen-activated prote 100.0 4.1E-42 1.4E-46 353.9 14.7 267 225-497 7-329 (388)
151 3llt_A Serine/threonine kinase 100.0 6.5E-42 2.2E-46 348.7 15.9 208 214-431 22-262 (360)
152 3cok_A Serine/threonine-protei 100.0 2.1E-41 7.1E-46 332.2 18.8 248 227-496 11-262 (278)
153 3f66_A Hepatocyte growth facto 100.0 1.1E-41 3.8E-46 337.6 16.9 254 227-500 25-288 (298)
154 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.6E-41 1.9E-45 342.5 22.4 247 225-500 63-336 (365)
155 3eqc_A Dual specificity mitoge 100.0 2.5E-42 8.5E-47 351.9 12.2 266 226-496 32-324 (360)
156 1b6c_B TGF-B superfamily recep 100.0 4.9E-41 1.7E-45 339.6 21.5 266 219-500 34-333 (342)
157 3lm5_A Serine/threonine-protei 100.0 1.7E-41 5.7E-46 341.0 17.9 257 222-497 23-288 (327)
158 2x4f_A Myosin light chain kina 100.0 7.6E-42 2.6E-46 349.4 15.4 245 232-496 94-342 (373)
159 3mtl_A Cell division protein k 100.0 1.4E-42 4.9E-47 348.3 9.8 261 227-496 2-281 (324)
160 1u5q_A Serine/threonine protei 100.0 1E-41 3.4E-46 345.3 16.0 246 227-497 54-306 (348)
161 3i6u_A CDS1, serine/threonine- 100.0 3E-41 1E-45 350.5 20.0 255 224-497 132-400 (419)
162 4aaa_A Cyclin-dependent kinase 100.0 1.9E-41 6.4E-46 341.3 17.8 266 227-496 25-306 (331)
163 2yfx_A Tyrosine-protein kinase 100.0 7.3E-42 2.5E-46 343.6 14.7 255 226-500 29-301 (327)
164 3ttj_A Mitogen-activated prote 100.0 2.2E-41 7.4E-46 355.6 18.8 264 226-497 61-356 (464)
165 2a19_B Interferon-induced, dou 100.0 1.3E-41 4.5E-46 334.4 16.0 244 225-500 9-271 (284)
166 4fl3_A Tyrosine-protein kinase 100.0 1.4E-41 4.7E-46 369.8 17.5 247 233-500 375-628 (635)
167 2wqm_A Serine/threonine-protei 100.0 3.1E-41 1E-45 336.4 18.6 256 227-500 32-294 (310)
168 3brb_A Proto-oncogene tyrosine 100.0 1.7E-41 5.8E-46 338.7 16.6 257 224-500 31-305 (313)
169 1byg_A CSK, protein (C-termina 100.0 1.2E-41 4E-46 334.0 15.1 247 226-500 20-270 (278)
170 2vgo_A Serine/threonine-protei 100.0 1.5E-41 5.2E-46 334.3 15.8 246 227-496 14-262 (284)
171 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.9E-41 1E-45 358.4 19.2 249 226-492 184-439 (543)
172 1x8b_A WEE1HU, WEE1-like prote 100.0 1.9E-41 6.5E-46 333.7 16.4 244 226-497 10-280 (289)
173 2rku_A Serine/threonine-protei 100.0 2.2E-41 7.6E-46 334.8 16.9 249 227-497 15-266 (294)
174 2ac3_A MAP kinase-interacting 100.0 5.3E-41 1.8E-45 335.6 19.9 256 227-497 12-296 (316)
175 2y7j_A Phosphorylase B kinase 100.0 1.6E-40 5.4E-45 338.9 23.7 257 222-497 89-360 (365)
176 2buj_A Serine/threonine-protei 100.0 1.7E-41 5.9E-46 339.3 16.0 258 226-502 28-305 (317)
177 2w5a_A Serine/threonine-protei 100.0 4.3E-42 1.5E-46 337.2 11.2 253 227-500 6-271 (279)
178 2owb_A Serine/threonine-protei 100.0 2.6E-41 9E-46 340.8 17.1 248 227-496 41-291 (335)
179 2jii_A Serine/threonine-protei 100.0 1.7E-41 5.7E-46 344.7 15.4 256 227-500 42-333 (352)
180 3n9x_A Phosphotransferase; mal 100.0 1.1E-40 3.9E-45 347.6 21.9 200 226-429 25-253 (432)
181 3g2f_A Bone morphogenetic prot 100.0 2.1E-41 7.3E-46 341.5 15.7 265 226-500 12-315 (336)
182 2vwi_A Serine/threonine-protei 100.0 8.8E-42 3E-46 338.9 12.4 260 224-496 12-287 (303)
183 2h6d_A 5'-AMP-activated protei 100.0 2.5E-41 8.6E-46 331.1 15.4 248 227-497 11-262 (276)
184 3rp9_A Mitogen-activated prote 100.0 1.1E-40 3.8E-45 350.8 21.2 194 227-424 53-280 (458)
185 1t4h_A Serine/threonine-protei 100.0 5E-41 1.7E-45 331.6 17.4 248 228-497 27-283 (290)
186 3nyv_A Calmodulin-domain prote 100.0 1E-40 3.5E-45 353.5 20.7 251 226-496 25-281 (484)
187 1ua2_A CAK, cell division prot 100.0 4.1E-41 1.4E-45 341.0 16.8 266 225-498 8-293 (346)
188 3pg1_A Mitogen-activated prote 100.0 1.2E-41 4.1E-46 347.1 13.0 274 218-497 13-317 (362)
189 3nsz_A CK II alpha, casein kin 100.0 1.9E-40 6.6E-45 333.6 21.6 257 227-497 36-320 (330)
190 2w1i_A JAK2; chromosomal rearr 100.0 5.5E-41 1.9E-45 337.1 17.5 262 227-500 41-319 (326)
191 3eb0_A Putative uncharacterize 100.0 2.1E-41 7.3E-46 347.9 14.6 260 223-496 3-321 (383)
192 2jam_A Calcium/calmodulin-depe 100.0 3.7E-41 1.3E-45 334.9 15.9 251 226-497 8-262 (304)
193 3byv_A Rhoptry kinase; malaria 100.0 5.1E-42 1.7E-46 351.7 9.8 240 226-496 72-359 (377)
194 3q5i_A Protein kinase; CDPK, m 100.0 2.5E-40 8.6E-45 352.1 23.0 252 226-497 35-302 (504)
195 1cm8_A Phosphorylated MAP kina 100.0 3.2E-41 1.1E-45 344.2 15.5 261 227-497 25-308 (367)
196 3ll6_A Cyclin G-associated kin 100.0 1.4E-41 4.7E-46 342.6 12.4 250 226-500 27-305 (337)
197 3mi9_A Cell division protein k 100.0 5.4E-41 1.8E-45 340.8 16.8 263 227-497 17-312 (351)
198 2r3i_A Cell division protein k 100.0 5.4E-41 1.9E-45 332.7 16.3 262 227-496 3-283 (299)
199 2ycf_A Serine/threonine-protei 100.0 4.5E-40 1.5E-44 329.9 23.0 253 226-497 9-275 (322)
200 3lij_A Calcium/calmodulin depe 100.0 2.7E-40 9.1E-45 351.0 21.9 250 227-496 37-291 (494)
201 2clq_A Mitogen-activated prote 100.0 2.2E-40 7.5E-45 327.6 19.7 249 228-496 23-278 (295)
202 3mwu_A Calmodulin-domain prote 100.0 1.9E-40 6.4E-45 351.5 20.5 252 226-497 21-277 (486)
203 3qyz_A Mitogen-activated prote 100.0 2.2E-40 7.5E-45 338.0 20.0 267 226-497 26-314 (364)
204 3fme_A Dual specificity mitoge 100.0 4.7E-41 1.6E-45 331.5 14.5 251 226-496 6-266 (290)
205 3pfq_A PKC-B, PKC-beta, protei 100.0 4E-41 1.4E-45 368.6 15.2 250 225-496 339-597 (674)
206 3sv0_A Casein kinase I-like; t 100.0 1.2E-39 4E-44 342.7 25.8 259 226-501 6-276 (483)
207 3q60_A ROP5B; pseudokinase, tr 100.0 2.4E-41 8E-46 346.1 12.4 253 227-496 62-352 (371)
208 3an0_A Dual specificity mitoge 100.0 5.9E-41 2E-45 338.9 15.0 251 226-496 50-310 (340)
209 3com_A Serine/threonine-protei 100.0 5.9E-40 2E-44 327.7 21.9 250 225-496 27-278 (314)
210 2x7f_A TRAF2 and NCK-interacti 100.0 3.7E-41 1.3E-45 338.3 13.3 259 217-497 14-287 (326)
211 2pml_X PFPK7, Ser/Thr protein 100.0 7.7E-41 2.6E-45 339.1 15.6 259 226-497 30-323 (348)
212 4e7w_A Glycogen synthase kinas 100.0 4.9E-41 1.7E-45 346.2 14.1 258 227-497 40-322 (394)
213 1u46_A ACK-1, activated CDC42 100.0 3.8E-41 1.3E-45 332.4 12.7 254 227-500 18-281 (291)
214 2j0j_A Focal adhesion kinase 1 100.0 8.2E-41 2.8E-45 365.1 16.0 256 224-500 387-648 (656)
215 3cek_A Dual specificity protei 100.0 1.4E-40 4.9E-45 332.1 16.1 254 224-497 25-293 (313)
216 1phk_A Phosphorylase kinase; g 100.0 3.2E-40 1.1E-44 327.0 18.3 252 226-496 16-283 (298)
217 2j7t_A Serine/threonine-protei 100.0 4.1E-40 1.4E-44 326.9 18.8 252 226-497 18-276 (302)
218 2xrw_A Mitogen-activated prote 100.0 6.6E-40 2.2E-44 335.2 20.5 263 227-497 25-319 (371)
219 3kvw_A DYRK2, dual specificity 100.0 1.3E-40 4.5E-45 346.6 15.4 197 226-432 96-303 (429)
220 3e3p_A Protein kinase, putativ 100.0 2.4E-40 8.3E-45 337.0 16.6 266 221-496 17-314 (360)
221 1wak_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 338.9 19.3 263 226-497 36-392 (397)
222 1j1b_A Glycogen synthase kinas 100.0 1.2E-40 4E-45 346.2 14.4 256 228-497 55-337 (420)
223 2fst_X Mitogen-activated prote 100.0 2.4E-40 8.1E-45 337.5 16.4 262 227-497 29-312 (367)
224 2b9h_A MAP kinase FUS3, mitoge 100.0 5.2E-41 1.8E-45 341.1 11.3 263 226-497 10-306 (353)
225 1blx_A Cyclin-dependent kinase 100.0 1.7E-40 5.7E-45 333.4 14.9 264 225-497 9-297 (326)
226 2wtk_C Serine/threonine-protei 100.0 9E-40 3.1E-44 324.9 19.1 250 226-497 4-264 (305)
227 1z57_A Dual specificity protei 100.0 7.5E-40 2.6E-44 330.1 18.0 256 227-496 14-328 (339)
228 2wei_A Calmodulin-domain prote 100.0 2.2E-39 7.4E-44 319.4 20.5 252 225-496 20-276 (287)
229 3aln_A Dual specificity mitoge 100.0 3.7E-40 1.3E-44 331.2 15.0 253 227-496 22-285 (327)
230 3rgf_A Cyclin-dependent kinase 100.0 1.1E-39 3.6E-44 337.8 18.5 263 228-497 21-334 (405)
231 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-40 6.2E-45 332.1 12.1 256 224-501 30-300 (319)
232 4exu_A Mitogen-activated prote 100.0 2.5E-39 8.7E-44 330.9 19.9 258 227-497 42-324 (371)
233 2vx3_A Dual specificity tyrosi 100.0 6.1E-39 2.1E-43 329.4 22.1 200 225-432 52-262 (382)
234 2iwi_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44 328.3 12.9 245 223-497 27-284 (312)
235 1zy4_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 320.0 18.8 251 226-497 5-284 (303)
236 3coi_A Mitogen-activated prote 100.0 7.5E-39 2.6E-43 325.2 21.3 257 227-497 24-306 (353)
237 3a99_A Proto-oncogene serine/t 100.0 2.1E-40 7.1E-45 332.0 9.4 243 225-497 41-294 (320)
238 3fhr_A MAP kinase-activated pr 100.0 2.4E-39 8.2E-44 326.5 16.9 250 226-496 27-287 (336)
239 2rio_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 337.4 17.7 249 228-497 16-296 (434)
240 2i6l_A Mitogen-activated prote 100.0 3.3E-39 1.1E-43 322.8 16.9 261 227-496 11-305 (320)
241 1q8y_A SR protein kinase; tran 100.0 4.6E-39 1.6E-43 329.1 17.4 261 227-496 19-333 (373)
242 2eu9_A Dual specificity protei 100.0 5.5E-39 1.9E-43 326.0 17.8 256 227-496 19-333 (355)
243 2dyl_A Dual specificity mitoge 100.0 1.2E-38 4.2E-43 318.6 18.6 250 227-496 25-283 (318)
244 3qa8_A MGC80376 protein; kinas 100.0 1.6E-39 5.6E-44 349.1 9.3 259 226-495 13-296 (676)
245 3p23_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 329.1 16.9 248 227-497 24-284 (432)
246 2pzi_A Probable serine/threoni 100.0 3.6E-38 1.2E-42 347.2 16.7 238 227-500 80-325 (681)
247 3uqc_A Probable conserved tran 100.0 4.1E-37 1.4E-41 302.8 17.3 229 227-500 31-262 (286)
248 2vuw_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 315.0 9.8 245 226-497 19-332 (336)
249 3m2w_A MAP kinase-activated pr 100.0 1.9E-36 6.5E-41 300.2 18.5 225 227-497 17-257 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 2.5E-37 8.6E-42 320.4 11.3 239 227-496 78-363 (413)
251 4azs_A Methyltransferase WBDD; 100.0 1.2E-30 4.1E-35 279.7 6.4 186 235-428 242-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.4E-27 1.2E-31 251.6 8.1 185 230-428 339-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 3.4E-24 1.2E-28 209.6 10.3 154 220-402 83-253 (282)
254 1zth_A RIO1 serine protein kin 99.8 1.1E-19 3.7E-24 175.5 11.1 138 229-378 49-220 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 1.3E-17 4.5E-22 167.3 6.9 142 226-378 94-266 (397)
256 2wfh_A SLIT homolog 2 protein 99.6 6.6E-15 2.3E-19 135.2 9.5 104 27-131 35-143 (193)
257 1w8a_A SLIT protein; signaling 99.6 5.4E-15 1.8E-19 135.7 8.6 106 26-131 32-143 (192)
258 3rgz_A Protein brassinosteroid 99.6 3.9E-15 1.3E-19 166.0 8.7 110 27-137 636-749 (768)
259 2v9t_B SLIT homolog 2 protein 99.5 1.2E-14 4.1E-19 136.5 9.3 103 28-130 61-168 (220)
260 2v70_A SLIT-2, SLIT homolog 2 99.5 2.4E-14 8.1E-19 134.4 9.6 104 27-130 61-169 (220)
261 3e6j_A Variable lymphocyte rec 99.5 7.6E-14 2.6E-18 131.8 10.6 81 28-108 45-125 (229)
262 2o6r_A Variable lymphocyte rec 99.5 1.4E-13 4.7E-18 124.5 10.7 104 27-130 32-140 (177)
263 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.4E-18 123.8 9.9 101 27-130 13-118 (170)
264 3m19_A Variable lymphocyte rec 99.5 1.6E-13 5.4E-18 131.6 10.4 100 28-127 64-168 (251)
265 2r9u_A Variable lymphocyte rec 99.4 2.1E-13 7.3E-18 122.8 9.9 101 27-130 16-121 (174)
266 1ogq_A PGIP-2, polygalacturona 99.4 6.4E-14 2.2E-18 138.9 5.2 115 13-127 38-162 (313)
267 2v9t_B SLIT homolog 2 protein 99.4 2.9E-13 9.9E-18 126.9 9.4 113 15-127 15-141 (220)
268 1ogq_A PGIP-2, polygalacturona 99.4 1.2E-13 4.2E-18 136.9 6.8 124 7-131 175-308 (313)
269 2o6s_A Variable lymphocyte rec 99.4 6E-13 2E-17 123.6 11.0 102 28-129 57-163 (208)
270 3rfs_A Internalin B, repeat mo 99.4 5.3E-13 1.8E-17 129.5 10.7 123 5-127 62-194 (272)
271 1p9a_G Platelet glycoprotein I 99.4 4.5E-13 1.5E-17 131.3 10.2 84 28-112 82-165 (290)
272 1w8a_A SLIT protein; signaling 99.4 2.1E-13 7.2E-18 125.0 7.3 125 6-130 29-165 (192)
273 3g39_A Variable lymphocyte rec 99.4 5.4E-13 1.8E-17 119.7 9.0 87 27-113 34-120 (170)
274 2o6q_A Variable lymphocyte rec 99.4 9.2E-13 3.1E-17 127.6 10.9 123 5-127 60-194 (270)
275 3e6j_A Variable lymphocyte rec 99.4 1E-12 3.6E-17 124.0 10.3 125 5-130 39-175 (229)
276 2ifg_A High affinity nerve gro 99.4 6.6E-13 2.3E-17 133.6 9.1 103 27-131 12-120 (347)
277 3rgz_A Protein brassinosteroid 99.4 5.6E-13 1.9E-17 148.5 8.7 98 30-127 615-717 (768)
278 2v70_A SLIT-2, SLIT homolog 2 99.4 9E-13 3.1E-17 123.6 8.7 101 27-127 36-142 (220)
279 4g8a_A TOLL-like receptor 4; l 99.4 5E-13 1.7E-17 145.4 7.4 105 27-131 473-584 (635)
280 2r9u_A Variable lymphocyte rec 99.4 1.4E-12 4.9E-17 117.4 8.8 87 27-113 37-123 (174)
281 3m19_A Variable lymphocyte rec 99.3 2.4E-12 8.3E-17 123.2 10.4 101 27-127 39-144 (251)
282 1ozn_A Reticulon 4 receptor; N 99.3 9.5E-13 3.2E-17 128.6 7.2 123 5-127 79-214 (285)
283 2xot_A Amphoterin-induced prot 99.3 8.7E-13 3E-17 133.5 7.0 84 28-111 69-152 (361)
284 4g8a_A TOLL-like receptor 4; l 99.3 1.4E-12 4.8E-17 141.9 9.0 116 14-129 34-163 (635)
285 2o6s_A Variable lymphocyte rec 99.3 4.2E-12 1.4E-16 117.8 10.4 115 13-127 9-137 (208)
286 3v47_A TOLL-like receptor 5B a 99.3 1.7E-12 5.8E-17 135.5 8.6 126 6-131 275-412 (455)
287 2z66_A Variable lymphocyte rec 99.3 1.3E-12 4.6E-17 128.9 7.2 100 28-127 131-236 (306)
288 3rfs_A Internalin B, repeat mo 99.3 4.6E-12 1.6E-16 122.8 9.9 121 5-127 40-170 (272)
289 3j0a_A TOLL-like receptor 5; m 99.3 9.4E-13 3.2E-17 148.3 5.5 126 5-132 425-565 (844)
290 4eco_A Uncharacterized protein 99.3 1.1E-12 3.9E-17 142.8 5.5 112 14-127 73-287 (636)
291 3tm0_A Aminoglycoside 3'-phosp 99.3 1.6E-11 5.3E-16 118.3 11.6 145 224-375 11-212 (263)
292 3zyj_A Leucine-rich repeat-con 99.3 5.9E-12 2E-16 131.0 8.8 103 27-131 189-296 (440)
293 1p9a_G Platelet glycoprotein I 99.3 9.4E-12 3.2E-16 121.8 9.4 119 6-127 31-161 (290)
294 3zyi_A Leucine-rich repeat-con 99.2 8.5E-12 2.9E-16 130.2 8.9 103 27-131 200-307 (452)
295 2xot_A Amphoterin-induced prot 99.2 6.7E-12 2.3E-16 126.9 7.9 101 28-128 44-150 (361)
296 4fcg_A Uncharacterized protein 99.2 9.8E-12 3.4E-16 124.0 8.9 97 28-126 155-265 (328)
297 4ecn_A Leucine-rich repeat pro 99.2 2.5E-12 8.5E-17 143.4 4.9 113 14-127 315-529 (876)
298 2wfh_A SLIT homolog 2 protein 99.2 9.3E-12 3.2E-16 114.0 7.7 108 5-112 30-143 (193)
299 2je0_A Acidic leucine-rich nuc 99.2 5.9E-12 2E-16 110.1 5.9 101 25-127 19-126 (149)
300 2o6r_A Variable lymphocyte rec 99.2 1.4E-11 4.7E-16 111.2 8.2 109 5-113 27-142 (177)
301 2o6q_A Variable lymphocyte rec 99.2 2.3E-11 8E-16 117.7 10.2 123 6-128 37-171 (270)
302 3vq2_A TLR4, TOLL-like recepto 99.2 5.6E-12 1.9E-16 136.6 6.2 102 29-130 454-561 (606)
303 2ell_A Acidic leucine-rich nuc 99.2 9.7E-12 3.3E-16 111.1 6.3 99 27-127 28-133 (168)
304 4ezg_A Putative uncharacterize 99.2 1.6E-11 5.3E-16 112.9 7.7 77 28-106 71-147 (197)
305 2id5_A Lingo-1, leucine rich r 99.2 9.7E-12 3.3E-16 130.7 6.8 107 25-131 226-337 (477)
306 2z63_A TOLL-like receptor 4, v 99.2 1.4E-11 4.7E-16 132.4 7.9 103 28-130 426-534 (570)
307 2ell_A Acidic leucine-rich nuc 99.2 1.3E-11 4.3E-16 110.4 6.3 121 5-127 23-160 (168)
308 1ozn_A Reticulon 4 receptor; N 99.2 2.5E-11 8.4E-16 118.4 8.9 124 5-128 55-191 (285)
309 4fcg_A Uncharacterized protein 99.2 3.8E-11 1.3E-15 119.7 10.4 121 5-127 149-290 (328)
310 1dce_A Protein (RAB geranylger 99.2 2.2E-11 7.4E-16 130.3 8.9 97 27-128 445-547 (567)
311 1xku_A Decorin; proteoglycan, 99.2 3.2E-11 1.1E-15 120.3 9.3 100 28-128 197-307 (330)
312 4b8c_D Glucose-repressible alc 99.2 4.9E-12 1.7E-16 139.5 3.5 120 5-127 223-354 (727)
313 1nd4_A Aminoglycoside 3'-phosp 99.2 3.3E-11 1.1E-15 115.7 9.0 137 228-376 21-214 (264)
314 2ifg_A High affinity nerve gro 99.2 2.4E-11 8.3E-16 122.1 8.0 104 27-131 35-145 (347)
315 2je0_A Acidic leucine-rich nuc 99.2 1.1E-11 3.7E-16 108.4 4.7 106 5-112 16-130 (149)
316 2z66_A Variable lymphocyte rec 99.2 2.1E-11 7.3E-16 120.2 6.9 124 5-128 77-213 (306)
317 3t6q_A CD180 antigen; protein- 99.2 2E-11 6.9E-16 132.2 6.9 85 28-112 430-517 (606)
318 4eco_A Uncharacterized protein 99.2 5E-11 1.7E-15 129.8 9.9 98 28-128 493-601 (636)
319 2z62_A TOLL-like receptor 4, v 99.2 4.7E-11 1.6E-15 115.9 8.6 113 15-127 11-137 (276)
320 2id5_A Lingo-1, leucine rich r 99.2 3.6E-11 1.2E-15 126.3 8.2 113 15-127 15-141 (477)
321 3vq2_A TLR4, TOLL-like recepto 99.2 4.6E-11 1.6E-15 129.5 9.3 113 15-127 15-141 (606)
322 3t6q_A CD180 antigen; protein- 99.1 4.4E-11 1.5E-15 129.6 8.2 114 15-128 16-143 (606)
323 3zyi_A Leucine-rich repeat-con 99.1 5.4E-11 1.8E-15 124.1 8.4 110 15-124 58-181 (452)
324 3oja_B Anopheles plasmodium-re 99.1 6.9E-11 2.4E-15 127.8 9.4 124 5-128 50-185 (597)
325 3v47_A TOLL-like receptor 5B a 99.1 4E-11 1.4E-15 125.1 7.1 104 25-128 277-385 (455)
326 2z62_A TOLL-like receptor 4, v 99.1 6.8E-11 2.3E-15 114.7 8.2 122 6-127 28-162 (276)
327 3dxp_A Putative acyl-COA dehyd 99.1 3.2E-10 1.1E-14 114.5 12.6 143 231-376 42-248 (359)
328 3o6n_A APL1; leucine-rich repe 99.1 1.3E-10 4.5E-15 118.7 9.7 123 5-127 44-178 (390)
329 3zyj_A Leucine-rich repeat-con 99.1 1E-10 3.6E-15 121.5 8.7 111 15-125 47-171 (440)
330 3oja_A Leucine-rich immune mol 99.1 4.2E-11 1.4E-15 126.0 5.8 100 26-127 123-227 (487)
331 1dce_A Protein (RAB geranylger 99.1 6.7E-11 2.3E-15 126.5 7.2 104 7-113 442-551 (567)
332 4ecn_A Leucine-rich repeat pro 99.1 1.6E-10 5.4E-15 129.0 10.3 96 28-126 702-818 (876)
333 2ft3_A Biglycan; proteoglycan, 99.1 1.5E-10 5.1E-15 115.6 8.9 85 28-113 198-282 (332)
334 3oja_B Anopheles plasmodium-re 99.1 1.1E-10 3.7E-15 126.2 8.4 123 5-127 74-205 (597)
335 1a9n_A U2A', U2A'; complex (nu 99.1 6.1E-11 2.1E-15 106.8 4.9 98 27-128 23-127 (176)
336 2z7x_B TOLL-like receptor 1, v 99.1 1.4E-10 4.7E-15 123.3 8.3 102 28-130 353-484 (520)
337 1wwl_A Monocyte differentiatio 99.1 5.4E-11 1.9E-15 117.7 4.6 83 27-110 99-188 (312)
338 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 1.9E-10 6.3E-15 123.5 9.0 125 5-130 352-513 (562)
339 1wwl_A Monocyte differentiatio 99.1 8.2E-11 2.8E-15 116.4 5.5 123 5-128 94-242 (312)
340 3oja_A Leucine-rich immune mol 99.1 7.7E-11 2.6E-15 124.0 5.3 121 5-128 79-205 (487)
341 4ezg_A Putative uncharacterize 99.0 1.6E-10 5.6E-15 106.0 6.5 81 28-112 49-129 (197)
342 1ziw_A TOLL-like receptor 3; i 99.0 2.9E-10 9.9E-15 124.9 9.2 83 30-112 56-138 (680)
343 3o6n_A APL1; leucine-rich repe 99.0 3.4E-10 1.2E-14 115.6 8.9 123 5-127 68-199 (390)
344 4b8c_D Glucose-repressible alc 99.0 2.2E-10 7.5E-15 126.3 7.9 97 27-127 228-329 (727)
345 4glp_A Monocyte differentiatio 99.0 1.5E-10 5.3E-15 114.3 5.9 123 5-128 144-286 (310)
346 2ft3_A Biglycan; proteoglycan, 99.0 3.7E-10 1.3E-14 112.6 8.7 98 27-127 58-160 (332)
347 1ziw_A TOLL-like receptor 3; i 99.0 2.8E-10 9.4E-15 125.1 8.1 114 15-128 8-135 (680)
348 2z80_A TOLL-like receptor 2, v 99.0 2.3E-10 7.7E-15 115.3 6.8 85 28-112 57-141 (353)
349 3j0a_A TOLL-like receptor 5; m 99.0 2.6E-10 8.9E-15 128.3 7.7 125 4-128 22-162 (844)
350 2z63_A TOLL-like receptor 4, v 99.0 3.7E-10 1.3E-14 121.2 8.6 100 28-127 33-137 (570)
351 2z81_A CD282 antigen, TOLL-lik 99.0 2.3E-10 7.8E-15 122.3 6.8 99 27-125 30-134 (549)
352 4glp_A Monocyte differentiatio 99.0 1.3E-10 4.4E-15 114.8 4.5 81 28-108 122-210 (310)
353 3sg8_A APH(2'')-ID; antibiotic 99.0 3.5E-10 1.2E-14 111.4 7.4 187 232-429 25-288 (304)
354 1a9n_A U2A', U2A'; complex (nu 99.0 3.7E-10 1.3E-14 101.6 6.9 104 6-112 19-130 (176)
355 3a79_B TLR6, VLRB.59, TOLL-lik 99.0 3.4E-10 1.1E-14 121.5 7.7 97 28-127 57-159 (562)
356 2z7x_B TOLL-like receptor 1, v 99.0 3.8E-10 1.3E-14 119.8 7.7 102 26-127 327-434 (520)
357 3o53_A Protein LRIM1, AGAP0063 99.0 3E-10 1E-14 112.5 6.1 99 27-127 124-227 (317)
358 1xku_A Decorin; proteoglycan, 99.0 5.6E-10 1.9E-14 111.2 7.7 97 28-127 57-158 (330)
359 2xwt_C Thyrotropin receptor; s 99.0 2.7E-10 9.4E-15 107.9 5.1 101 26-127 34-144 (239)
360 2z80_A TOLL-like receptor 2, v 99.0 3.3E-10 1.1E-14 114.0 5.9 122 5-127 51-187 (353)
361 2z81_A CD282 antigen, TOLL-lik 99.0 3.2E-10 1.1E-14 121.2 5.9 123 5-127 25-161 (549)
362 2xwt_C Thyrotropin receptor; s 99.0 3.8E-10 1.3E-14 106.9 5.3 120 6-127 31-169 (239)
363 1h6t_A Internalin B; cell adhe 98.9 1.3E-09 4.5E-14 106.5 6.9 118 5-128 67-192 (291)
364 1h6t_A Internalin B; cell adhe 98.9 2.4E-09 8.3E-14 104.6 8.7 117 5-128 45-170 (291)
365 1h6u_A Internalin H; cell adhe 98.9 1.2E-09 4E-14 107.8 6.3 118 5-128 84-209 (308)
366 1xeu_A Internalin C; cellular 98.9 2.1E-09 7.2E-14 103.4 7.3 93 28-127 68-163 (263)
367 3o53_A Protein LRIM1, AGAP0063 98.9 7.7E-10 2.6E-14 109.6 4.4 121 5-128 79-205 (317)
368 1h6u_A Internalin H; cell adhe 98.9 2.7E-09 9.2E-14 105.2 8.2 119 4-128 61-187 (308)
369 4fmz_A Internalin; leucine ric 98.9 2.1E-09 7.1E-14 107.8 7.1 118 5-128 198-325 (347)
370 1xeu_A Internalin C; cellular 98.9 3.7E-09 1.3E-13 101.6 8.3 117 5-129 62-187 (263)
371 1m9s_A Internalin B; cell inva 98.9 2.7E-09 9.2E-14 114.8 7.9 117 5-127 64-188 (605)
372 4ay9_X Follicle-stimulating ho 98.8 2E-09 6.9E-14 108.2 6.2 101 15-115 13-124 (350)
373 1m9s_A Internalin B; cell inva 98.8 4.4E-09 1.5E-13 113.1 8.6 93 28-127 70-166 (605)
374 1ds9_A Outer arm dynein; leuci 98.8 1.1E-10 3.6E-15 107.4 -3.9 99 25-127 20-128 (198)
375 3cvr_A Invasion plasmid antige 98.8 1.3E-08 4.3E-13 108.5 10.4 108 7-127 60-173 (571)
376 3cvr_A Invasion plasmid antige 98.8 1.1E-08 3.7E-13 109.0 9.7 109 6-127 80-193 (571)
377 1o6v_A Internalin A; bacterial 98.7 1E-08 3.4E-13 107.3 7.4 100 5-110 242-346 (466)
378 1ds9_A Outer arm dynein; leuci 98.7 9.8E-11 3.3E-15 107.6 -7.2 98 27-129 52-155 (198)
379 4fmz_A Internalin; leucine ric 98.7 1.2E-08 4.2E-13 102.1 6.9 116 5-127 176-300 (347)
380 1o6v_A Internalin A; bacterial 98.7 2.1E-08 7.2E-13 104.8 7.8 78 29-112 249-326 (466)
381 1jl5_A Outer protein YOPM; leu 98.7 4.9E-08 1.7E-12 101.6 10.1 114 6-127 111-228 (454)
382 3bz5_A Internalin-J, INLJ; leu 98.7 5.1E-08 1.8E-12 101.5 9.6 115 5-127 126-246 (457)
383 3bz5_A Internalin-J, INLJ; leu 98.6 4.7E-08 1.6E-12 101.8 8.2 102 5-115 147-253 (457)
384 3r70_A Aminoglycoside phosphot 98.6 2.4E-07 8.2E-12 91.7 12.8 137 228-377 38-238 (320)
385 2ca6_A RAN GTPase-activating p 98.6 2E-09 6.8E-14 109.7 -2.7 84 27-110 163-259 (386)
386 3goz_A Leucine-rich repeat-con 98.6 1.1E-08 3.9E-13 103.1 1.9 83 30-112 5-97 (362)
387 1jl5_A Outer protein YOPM; leu 98.6 1.2E-07 4.2E-12 98.5 9.7 71 28-108 158-228 (454)
388 3d1u_A Putative fructosamine-3 98.6 6.3E-07 2.2E-11 87.1 13.9 76 231-311 19-97 (288)
389 2ca6_A RAN GTPase-activating p 98.6 4.7E-09 1.6E-13 107.0 -1.5 123 5-127 93-257 (386)
390 3goz_A Leucine-rich repeat-con 98.6 1.2E-08 4.2E-13 102.9 1.5 102 26-127 25-151 (362)
391 3g06_A SSPH2 (leucine-rich rep 98.5 6.3E-08 2.2E-12 104.3 6.8 109 6-127 181-297 (622)
392 3g06_A SSPH2 (leucine-rich rep 98.5 1.9E-07 6.6E-12 100.6 9.3 88 28-127 186-274 (622)
393 3rw6_A Nuclear RNA export fact 98.5 1.2E-08 4E-13 97.5 -0.4 84 28-113 148-238 (267)
394 2ast_B S-phase kinase-associat 98.4 2.3E-08 7.8E-13 99.6 -0.6 99 27-126 74-181 (336)
395 3tdw_A Gentamicin resistance p 98.4 2.1E-06 7.1E-11 84.3 13.1 136 232-376 24-224 (306)
396 2ast_B S-phase kinase-associat 98.4 3.1E-08 1.1E-12 98.6 -0.7 120 6-125 70-206 (336)
397 4gkh_A Aminoglycoside 3'-phosp 98.4 2.4E-06 8.2E-11 82.1 11.9 135 234-376 31-223 (272)
398 4ay9_X Follicle-stimulating ho 98.3 5.9E-07 2E-11 90.0 7.1 110 5-116 103-223 (350)
399 3ats_A Putative uncharacterize 98.3 1.4E-06 4.8E-11 87.5 9.5 144 233-376 26-252 (357)
400 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.5E-06 1.2E-10 84.7 12.2 141 230-377 44-244 (362)
401 3rw6_A Nuclear RNA export fact 98.2 5E-07 1.7E-11 86.1 3.2 75 25-101 172-257 (267)
402 1z7x_W Ribonuclease inhibitor; 98.2 5.1E-08 1.7E-12 101.5 -5.4 122 5-126 27-182 (461)
403 3un9_A NLR family member X1; l 98.1 8.7E-08 3E-12 96.8 -4.7 122 6-127 101-252 (372)
404 1z7x_W Ribonuclease inhibitor; 98.1 1.1E-07 3.9E-12 98.9 -4.3 123 5-127 255-411 (461)
405 3sb4_A Hypothetical leucine ri 98.0 6.6E-06 2.2E-10 81.5 7.4 88 27-116 230-318 (329)
406 3un9_A NLR family member X1; l 98.0 3.5E-07 1.2E-11 92.4 -2.1 107 5-111 125-255 (372)
407 2olc_A MTR kinase, methylthior 98.0 3.4E-05 1.2E-09 78.5 11.7 76 232-309 35-120 (397)
408 2q83_A YTAA protein; 2635576, 97.9 5.3E-05 1.8E-09 75.1 11.1 137 233-375 38-251 (346)
409 3jr1_A Putative fructosamine-3 97.8 0.00013 4.4E-09 71.4 11.7 136 231-372 40-232 (312)
410 3f7w_A Putative fructosamine-3 97.8 0.00018 6.3E-09 69.5 12.4 79 228-311 16-97 (288)
411 2pyw_A Uncharacterized protein 97.8 0.00015 5.1E-09 74.3 12.1 79 345-424 231-312 (420)
412 3sb4_A Hypothetical leucine ri 97.6 0.00017 5.7E-09 71.3 9.3 15 5-19 48-62 (329)
413 1io0_A Tropomodulin; LRR prote 97.6 3.9E-06 1.3E-10 75.8 -2.8 82 28-109 41-137 (185)
414 1io0_A Tropomodulin; LRR prote 97.5 6.3E-06 2.1E-10 74.3 -2.7 103 6-108 36-164 (185)
415 3rfe_A Platelet glycoprotein I 97.4 0.0002 7E-09 60.2 6.4 57 51-109 12-69 (130)
416 2ppq_A HSK, HK, homoserine kin 97.4 0.00049 1.7E-08 67.6 9.6 154 218-375 8-216 (322)
417 3dxq_A Choline/ethanolamine ki 97.3 0.00073 2.5E-08 65.7 10.1 135 232-376 23-202 (301)
418 3csv_A Aminoglycoside phosphot 97.2 0.00075 2.6E-08 66.6 9.0 139 233-377 24-218 (333)
419 1nw1_A Choline kinase (49.2 KD 97.2 0.0012 4.3E-08 67.5 10.8 72 233-311 79-159 (429)
420 2yle_A Protein spire homolog 1 97.2 0.0017 6E-08 58.7 10.2 98 309-423 33-131 (229)
421 1zyl_A Hypothetical protein YI 97.2 0.0021 7.2E-08 63.1 11.9 139 233-376 32-223 (328)
422 3ogk_B Coronatine-insensitive 97.2 2.5E-05 8.5E-10 83.9 -2.7 96 32-127 416-526 (592)
423 3feg_A Choline/ethanolamine ki 97.1 0.0026 8.9E-08 63.8 11.7 137 233-375 56-253 (379)
424 2ra8_A Uncharacterized protein 97.1 0.00014 4.9E-09 72.7 1.8 65 45-109 217-293 (362)
425 3ogk_B Coronatine-insensitive 97.0 0.00021 7.2E-09 76.6 2.7 99 6-105 138-253 (592)
426 3rfe_A Platelet glycoprotein I 97.0 0.00085 2.9E-08 56.3 5.3 56 27-84 12-68 (130)
427 3c5i_A Choline kinase; choline 96.9 0.0031 1E-07 63.2 10.1 73 233-311 39-121 (369)
428 3e4g_A ATP synthase subunit S, 96.9 0.00014 4.7E-09 64.3 -0.1 80 26-105 64-149 (176)
429 2qg7_A Ethanolamine kinase PV0 96.9 0.0074 2.5E-07 62.1 12.6 74 232-311 113-188 (458)
430 2p1m_B Transport inhibitor res 96.6 0.00011 3.9E-09 78.6 -3.5 83 43-126 428-518 (594)
431 3i1a_A Spectinomycin phosphotr 96.6 0.009 3.1E-07 59.0 10.5 32 345-376 205-236 (339)
432 2p1m_B Transport inhibitor res 96.2 0.00052 1.8E-08 73.4 -1.3 79 28-106 110-195 (594)
433 4fdw_A Leucine rich hypothetic 96.1 0.0062 2.1E-07 61.7 6.3 65 40-105 264-333 (401)
434 4fdw_A Leucine rich hypothetic 96.0 0.0084 2.9E-07 60.7 6.3 80 29-111 277-361 (401)
435 3f2s_A CK, chetk-alpha, cholin 95.7 0.047 1.6E-06 54.9 10.3 139 233-375 58-279 (401)
436 3e4g_A ATP synthase subunit S, 95.1 0.0062 2.1E-07 53.6 1.6 71 38-108 52-128 (176)
437 3mes_A Choline kinase; malaria 94.5 0.22 7.5E-06 50.5 11.2 73 233-311 76-157 (424)
438 2ra8_A Uncharacterized protein 94.4 0.0057 2E-07 60.9 -0.6 97 28-127 177-292 (362)
439 1pgv_A TMD-1, tropomodulin TMD 93.8 0.011 3.7E-07 53.1 0.0 66 43-108 37-111 (197)
440 2ks1_B Epidermal growth factor 93.8 0.014 4.7E-07 37.9 0.5 31 166-196 12-42 (44)
441 1pgv_A TMD-1, tropomodulin TMD 93.4 0.028 9.6E-07 50.4 2.0 80 27-106 45-137 (197)
442 4fs7_A Uncharacterized protein 93.4 0.068 2.3E-06 53.8 5.1 63 41-105 291-353 (394)
443 4h09_A Hypothetical leucine ri 92.9 0.092 3.2E-06 52.3 5.2 70 35-105 251-320 (379)
444 2l2t_A Receptor tyrosine-prote 92.9 0.014 4.7E-07 37.8 -0.6 31 166-196 11-41 (44)
445 4gt6_A Cell surface protein; l 92.8 0.13 4.4E-06 51.7 6.2 67 39-108 280-346 (394)
446 3g15_A CK, chetk-alpha, cholin 92.1 0.67 2.3E-05 46.6 10.3 29 347-375 245-279 (401)
447 2jwa_A Receptor tyrosine-prote 90.3 0.047 1.6E-06 35.2 -0.2 29 167-195 13-41 (44)
448 4gt6_A Cell surface protein; l 89.5 0.57 1.9E-05 46.9 6.9 66 38-105 256-321 (394)
449 4h09_A Hypothetical leucine ri 88.7 0.5 1.7E-05 46.9 5.9 79 35-115 228-306 (379)
450 4ann_A ESSB; membrane protein, 88.1 1.5 5E-05 39.6 7.8 116 282-429 43-158 (215)
451 4ano_A ESSB; membrane protein, 88.1 2.1 7E-05 38.7 8.8 115 282-429 48-163 (219)
452 4fs7_A Uncharacterized protein 87.1 0.7 2.4E-05 46.2 5.8 64 38-105 267-330 (394)
453 3cxl_A N-chimerin; SH2, RHO-GA 76.5 0.31 1.1E-05 50.1 -1.7 62 231-295 146-215 (463)
454 2k9y_A Ephrin type-A receptor 74.3 0.55 1.9E-05 30.0 -0.3 25 168-192 16-40 (41)
455 1iij_A ERBB-2 receptor protein 69.4 0.87 3E-05 27.7 -0.2 26 168-193 10-35 (35)
456 2k1k_A Ephrin type-A receptor 61.3 1.5 5E-05 27.4 -0.3 26 166-191 11-37 (38)
457 2lz0_A Uncharacterized protein 53.4 28 0.00096 26.8 5.9 46 34-80 7-52 (100)
458 2l9u_A Receptor tyrosine-prote 41.1 1.9 6.5E-05 25.7 -2.0 25 168-192 9-33 (40)
459 2l6w_A Beta-type platelet-deri 47.2 5.7 0.00019 24.6 0.0 14 180-193 23-36 (39)
460 2lz0_A Uncharacterized protein 38.0 38 0.0013 26.0 4.4 47 57-104 6-52 (100)
461 2l34_A TYRO protein tyrosine k 20.8 20 0.00069 21.4 -0.1 24 168-191 9-32 (33)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.4e-56 Score=439.80 Aligned_cols=253 Identities=23% Similarity=0.346 Sum_probs=209.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEEC------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
+++..+.||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556788999999999999863 4678999999876555556789999999999999999999999999999999
Q ss_pred EeeccCCCchhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc
Q 008893 302 VYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 365 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 365 (549)
|||||++|+|.+++... ..++|..+..|+.|||.||.|||++ +||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 99999999999999532 3589999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCC-ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHH
Q 008893 366 AVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDW 443 (549)
Q Consensus 366 ~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~ 443 (549)
+||+|||+++.....+. .......||+.|||||++.++.++.++|||||||++|||+| |+.||..... .+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-------~~~ 256 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------QDV 256 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-------HHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-------HHH
Confidence 99999999987643322 22344579999999999999999999999999999999999 8999864321 112
Q ss_pred HHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 444 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 444 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
+..+.... ....+..++..+.+++.+||+.||++||||+||+++|+.
T Consensus 257 ~~~i~~~~----------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 257 VEMIRNRQ----------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHHTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHcCC----------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 22221111 111233445779999999999999999999999999985
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.6e-56 Score=436.25 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=208.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCcee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 300 (549)
++|.+.+.||+|+||+||+|.+. ++..||||+++... ....++|.+|++++++++|||||+++|+|.+.+..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 46778899999999999999864 47789999997543 233557999999999999999999999999999999
Q ss_pred eEeeccCCCchhhhhccC-------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceE
Q 008893 301 LVYPYMSNGSVASRLKAK-------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV 367 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~-------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 367 (549)
+|||||++|+|.++++.. ..++|.++..|+.|||.||.|||++ +|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 999999999999999642 3699999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCce-eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHH
Q 008893 368 VGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 445 (549)
Q Consensus 368 l~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 445 (549)
|+|||+|+......... .....||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.+.
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~~ 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEVIE 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHH
Confidence 99999998765433322 233569999999999999999999999999999999999 8999974321 11122
Q ss_pred HHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 446 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 446 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.+..... ...+..++.++.+++.+||+.||++|||++||.+.|++
T Consensus 242 ~i~~~~~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 242 CITQGRV----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHcCCC----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2221111 11233345779999999999999999999999998875
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.3e-55 Score=437.60 Aligned_cols=253 Identities=25% Similarity=0.409 Sum_probs=202.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCcee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 300 (549)
++|.+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+.+..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45667789999999999999864 47899999997543 233457999999999999999999999999999999
Q ss_pred eEeeccCCCchhhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc
Q 008893 301 LVYPYMSNGSVASRLKAK---------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 365 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 365 (549)
+|||||++|+|.++++.. .+++|.++..|+.|||.||.|||++ +|+||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 999999999999998642 3599999999999999999999998 9999999999999999999
Q ss_pred eEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHH
Q 008893 366 AVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDW 443 (549)
Q Consensus 366 ~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~ 443 (549)
+||+|||+++........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~ 269 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-------TEA 269 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-------HHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-------HHH
Confidence 999999999876543322 3345679999999999999999999999999999999999 8999974321 111
Q ss_pred HHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 444 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 444 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
+..+..... ...+..+++++.+++.+||+.||++|||++||+++|+.
T Consensus 270 ~~~i~~g~~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~ 316 (329)
T 4aoj_A 270 IDCITQGRE----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 316 (329)
T ss_dssp HHHHHHTCC----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHcCCC----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 222221111 11233345779999999999999999999999999986
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-54 Score=427.90 Aligned_cols=257 Identities=27% Similarity=0.400 Sum_probs=201.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.+++.+.+.||+|+||+||+|++++ .||||+++..... ...+.|.+|+.++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3567788999999999999998753 5999999754322 234579999999999999999999999865 56899999
Q ss_pred ccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC-
Q 008893 305 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS- 382 (549)
Q Consensus 305 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 382 (549)
||++|+|.++++. ...++|.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+.......
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999974 45799999999999999999999999 999999999999999999999999999987654332
Q ss_pred ceeeccccccCccCchhhcc---CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 383 HVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.......||+.|||||++.+ +.|+.++|||||||++|||+||+.||....... .+....... ...+
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-------~~~~~~~~~----~~~p 257 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-------QIIFMVGRG----YASP 257 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-------HHHHHHHTT----CCCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-------HHHHHHhcC----CCCC
Confidence 23345679999999999964 468999999999999999999999997432211 111111111 1111
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.+ ...+..++..+.+++.+||+.||++|||+.||+++|+.
T Consensus 258 ~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp CS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred Cc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11 11223345779999999999999999999999998874
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-53 Score=423.28 Aligned_cols=250 Identities=22% Similarity=0.200 Sum_probs=205.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
+.|+..+.||+|+||+||+|++. +|+.||||+++.... ..+|+.+++.++|||||++++++.+.+..++||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45777889999999999999975 599999999976432 24699999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC-ceEEeecccccccCCCCCc-
Q 008893 306 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY-EAVVGDFGLAKLLDHCDSH- 383 (549)
Q Consensus 306 ~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~~- 383 (549)
+++|+|.++++..+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 99999999998878899999999999999999999999 999999999999999887 6999999999977543221
Q ss_pred ---eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 384 ---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 384 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
.....+||+.|||||++.+..|+.++|||||||++|||+||+.||........ .. .+......
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~---~i~~~~~~------- 274 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----CL---KIASEPPP------- 274 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----HH---HHHHSCCG-------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HH---HHHcCCCC-------
Confidence 12335799999999999999999999999999999999999999975332221 11 11111100
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+||+.||++|||+.|++++|..
T Consensus 275 -~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 275 -IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp -GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 011222334678999999999999999999999998765
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.7e-53 Score=421.59 Aligned_cols=249 Identities=20% Similarity=0.276 Sum_probs=207.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
+.|+..+.||+|+||+||+|... +|+.||||++..... .....+.+|+.+++.++|||||++++++.+.+..|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 46888899999999999999976 699999999975432 3345688999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCcee
Q 008893 306 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 385 (549)
Q Consensus 306 ~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 385 (549)
+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.... ...
T Consensus 153 ~~gg~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 227 (346)
T 4fih_A 153 LEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 227 (346)
T ss_dssp CTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred CCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence 9999999999764 599999999999999999999999 99999999999999999999999999998775432 234
Q ss_pred eccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCC
Q 008893 386 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 465 (549)
Q Consensus 386 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 465 (549)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+....+.... .+.+ ..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~------~~~~--~~ 292 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNL------PPRL--KN 292 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSS------CCCC--SC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCC------CCCC--Cc
Confidence 456799999999999999999999999999999999999999974321 11111111110 0111 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 466 DRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 466 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
....+.++.+++.+||+.||++|||++|+++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1223467899999999999999999999875
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.4e-54 Score=428.50 Aligned_cols=250 Identities=21% Similarity=0.294 Sum_probs=202.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
++|++.+.||+|+||+||+|+.. +|+.||||++...... .....+.+|+++++.++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57899999999999999999975 6999999999765422 224569999999999999999999999999999999999
Q ss_pred ccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 305 YMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 305 ~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|+++|+|.+++.. ...+++..+..|+.||+.||.|||++ +|+||||||+|||+++++.+||+|||+|+..... .
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-V 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-H
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC-c
Confidence 9999999999964 34579999999999999999999999 9999999999999999999999999999876421 1
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+.+..+.... . +.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~~~-~-----~~-- 244 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-------KNLVLKIISGS-F-----PP-- 244 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTC-C-----CC--
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCC-C-----CC--
Confidence 123456799999999999999999999999999999999999999974321 12222222111 0 01
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.+...+.++.+++.+||+.||++|||++|++++
T Consensus 245 --~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 245 --VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 122234678999999999999999999999864
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.2e-54 Score=431.84 Aligned_cols=264 Identities=26% Similarity=0.369 Sum_probs=215.8
Q ss_pred CHHHHHHHhcCCCCCCeeeeeCCeEEEEEEECC------CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccC-CCccceE
Q 008893 218 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH-RNLLRLI 290 (549)
Q Consensus 218 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~ 290 (549)
..++++...++|++.+.||+|+||+||+|.+.. ++.||||+++..........|.+|++++.++.| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 345566667889999999999999999998642 368999999876544445679999999999965 8999999
Q ss_pred EEEecC-CceeeEeeccCCCchhhhhcc----------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEeccc
Q 008893 291 GFCMTT-TERLLVYPYMSNGSVASRLKA----------------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 353 (549)
Q Consensus 291 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 353 (549)
|+|... +..++|||||++|+|.++++. ...++|..+..++.|||.||.|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999765 568999999999999999963 23589999999999999999999999 9999999
Q ss_pred CcCeeeecCCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccC
Q 008893 354 KAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFG 431 (549)
Q Consensus 354 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~ 431 (549)
||+|||+++++.+||+|||+|+.+...... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999977544333 3445679999999999999999999999999999999998 89999743
Q ss_pred ccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 432 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.... .+. ..+.... ....+...+.++.+++.+||+.||++|||+.||+++|+.
T Consensus 292 ~~~~---~~~---~~i~~g~----------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 292 KIDE---EFC---RRLKEGT----------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp CCSH---HHH---HHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CHHH---HHH---HHHHcCC----------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 2211 111 1111111 111223334679999999999999999999999999975
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.7e-54 Score=421.41 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=210.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|++.+.||+|+||+||+|+.. +|+.||||++.... .......+.+|+++++.++|||||++++++.+.+..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46889999999999999999975 69999999996432 2234567999999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC-
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS- 382 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 382 (549)
||+++|+|.+++...+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999999998878899999999999999999999999 999999999999999999999999999998754332
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ......+.... .
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~-------~--- 251 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-------GLIFAKIIKLE-------Y--- 251 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-------C---
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCC-------C---
Confidence 234566899999999999999999999999999999999999999974321 11112221111 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 495 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 495 (549)
.++...+.++.+++.+||+.||++|||++|++
T Consensus 252 -~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 -DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11222346789999999999999999999975
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-52 Score=410.30 Aligned_cols=247 Identities=25% Similarity=0.371 Sum_probs=198.1
Q ss_pred CCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEec----CCceeeEe
Q 008893 230 SSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTERLLVY 303 (549)
Q Consensus 230 ~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 303 (549)
...+.||+|+||+||+|.+. ++..||+|++...... .....|.+|+.+++.++|||||++++++.. ....++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999976 5899999999754322 234569999999999999999999999864 34579999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec-CCCceEEeecccccccCCCCC
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|||++|+|.+++.....+++..+..++.||+.||+|||++ .++|+||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~--- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT---
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC---
Confidence 9999999999998888899999999999999999999998 12399999999999998 479999999999986542
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... .......+..... . ....
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~------~~~~~~~i~~~~~-~----~~~~ 252 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRVTSGVK-P----ASFD 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHHTTTCC-C----GGGG
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc------HHHHHHHHHcCCC-C----CCCC
Confidence 23345679999999998864 699999999999999999999999964321 1111122211111 0 0111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.. .++++.+++.+||+.||++|||++|+++
T Consensus 253 ~~----~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 KV----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GC----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cc----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 2356889999999999999999999986
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-52 Score=406.02 Aligned_cols=246 Identities=20% Similarity=0.320 Sum_probs=193.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC--CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|++.+.||+|+||+||+|... +|+.||||++..... ......+.+|+.+++.++|||||++++++.+.+..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999965 699999999975432 233457999999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+ +|+|.+++.....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC--
Confidence 999 689999998888899999999999999999999999 99999999999999999999999999998765322
Q ss_pred eeeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.... .......+.... .
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-------~~~~~~~i~~~~-------~--- 229 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-------IPVLFKNISNGV-------Y--- 229 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTC-------C---
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHcCC-------C---
Confidence 2344679999999999998876 579999999999999999999996422 112222221111 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.++...++++.+++.+||+.||++|||++|+++
T Consensus 230 -~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 -TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 112223467899999999999999999999986
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-52 Score=414.94 Aligned_cols=265 Identities=23% Similarity=0.321 Sum_probs=200.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC----ceeeE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT----ERLLV 302 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv 302 (549)
++|.+.+.||+|+||+||+|++. |+.||||+++... .....++.|+..+..++|||||+++|+|...+ ..++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 35677889999999999999984 8999999996532 11223445666677889999999999998654 57999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCceEecccCcCeeeecCCCceEEeeccccccc
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ-----CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 377 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 377 (549)
|||+++|+|.++++.. .++|+.+.+++.|++.||+|||++ ..++|+||||||+|||+++++++||+|||+++..
T Consensus 80 ~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999999865 599999999999999999999976 2468999999999999999999999999999877
Q ss_pred CCCCCce---eeccccccCccCchhhccC------CCCCcccchhHhHHHHHHHhCCcccccCccccc--------cccH
Q 008893 378 DHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISGLRALEFGKTANQ--------KGAM 440 (549)
Q Consensus 378 ~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~--------~~~~ 440 (549)
....... .....||+.|||||++.+. .++.++|||||||++|||+||+.|+........ ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 5443322 2345799999999999764 367899999999999999999888754322111 0011
Q ss_pred HHHHHHHhhccchhhhccccccCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 441 LDWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 441 ~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
......... . ..++.+... .....+..+.+++.+||+.||++||||.||++.|+.
T Consensus 239 ~~~~~~~~~-~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 239 EEMRKVVCE-Q----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp HHHHHHHTT-S----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHhc-c----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 111111111 1 111111111 123456788999999999999999999999999975
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-51 Score=421.91 Aligned_cols=249 Identities=20% Similarity=0.276 Sum_probs=208.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
+.|+..+.||+|+||+||+|... +|+.||||++..... .....+.+|+.+++.++|||||++++++...+..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56899999999999999999976 699999999975542 3345688999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCcee
Q 008893 306 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 385 (549)
Q Consensus 306 ~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 385 (549)
|++|+|.+++... .+++..+..|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+.+.... ...
T Consensus 230 ~~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 304 (423)
T 4fie_A 230 LEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 304 (423)
T ss_dssp CTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred CCCCcHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence 9999999999765 599999999999999999999999 99999999999999999999999999998775432 234
Q ss_pred eccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCC
Q 008893 386 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 465 (549)
Q Consensus 386 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 465 (549)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ......+.... .+.+ ..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~------~~~~--~~ 369 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNL------PPRL--KN 369 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSC------CCCC--SC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCC------CCCC--cc
Confidence 456799999999999999999999999999999999999999964321 11112221111 1111 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 466 DRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 466 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
....+.++.+++.+||+.||++|||+.|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1123467899999999999999999999975
No 14
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.1e-51 Score=413.00 Aligned_cols=313 Identities=70% Similarity=1.114 Sum_probs=263.0
Q ss_pred hhhhhhhhcCCccccCHHHHHHHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc
Q 008893 203 EQRREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 282 (549)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~ 282 (549)
.+.......+....|++.++..++++|+..+.||+|+||.||+|...+|+.||||++...........+.+|+.+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~ 85 (326)
T 3uim_A 6 AEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAV 85 (326)
T ss_dssp ---------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCC
T ss_pred cccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhcc
Confidence 33444556677889999999999999999999999999999999988899999999986654444447899999999999
Q ss_pred CCCccceEEEEecCCceeeEeeccCCCchhhhhccC----CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCee
Q 008893 283 HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANI 358 (549)
Q Consensus 283 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Ni 358 (549)
||||+++++++......++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+.++|+||||||+||
T Consensus 86 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Ni 165 (326)
T 3uim_A 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 165 (326)
T ss_dssp CTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGE
T ss_pred CCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhE
Confidence 999999999999999999999999999999999743 3499999999999999999999998778999999999999
Q ss_pred eecCCCceEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCcc-cccc
Q 008893 359 LLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKT-ANQK 437 (549)
Q Consensus 359 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~-~~~~ 437 (549)
|+++++.+||+|||+++..............||+.|+|||.+.+..++.++||||||+++|||+||+.||..... ....
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 245 (326)
T 3uim_A 166 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245 (326)
T ss_dssp EECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSC
T ss_pred EECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccc
Confidence 999999999999999998765555555566799999999999998999999999999999999999999974322 2233
Q ss_pred ccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCCCcchhhhhhHHHh
Q 008893 438 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLAEKWAASQKAEA 515 (549)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 515 (549)
....+|+...........+.+..+...+....+..+.+++.+||+.||++|||+.||+++|++..+.++|..++..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~ 323 (326)
T 3uim_A 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEM 323 (326)
T ss_dssp SBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-------
T ss_pred hhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHHHh
Confidence 356777777777777888888888888899999999999999999999999999999999999999998887655443
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.1e-53 Score=413.74 Aligned_cols=243 Identities=23% Similarity=0.293 Sum_probs=195.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC----CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
++|++.+.||+|+||+||+|+.. +++.||||+++.... ......+.+|+++++.++|||||++++++.+.+..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56899999999999999999862 478999999975421 1223367889999999999999999999999999999
Q ss_pred EeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 302 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
||||+++|+|.+++...+.+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 999999999999999888899999999999999999999999 99999999999999999999999999998654322
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+....+....
T Consensus 181 -~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~~~---------- 242 (304)
T 3ubd_A 181 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-------KETMTMILKAK---------- 242 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC----------
T ss_pred -ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-------HHHHHHHHcCC----------
Confidence 223456799999999999999999999999999999999999999974321 11122221110
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKM 491 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 491 (549)
..++...+.++.+++.+||+.||++|||+
T Consensus 243 -~~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 243 -LGMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -CCCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 11222334678999999999999999985
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.8e-51 Score=402.64 Aligned_cols=249 Identities=20% Similarity=0.307 Sum_probs=188.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC--------
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT-------- 297 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 297 (549)
++|++.+.||+|+||+||+|+.. +|+.||||+++..........+.+|+.+++.++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46889999999999999999975 699999999976554334457899999999999999999999987543
Q ss_pred ----ceeeEeeccCCCchhhhhccCCC---CCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEee
Q 008893 298 ----ERLLVYPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 370 (549)
Q Consensus 298 ----~~~lv~e~~~~g~L~~~l~~~~~---l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 370 (549)
..++||||+++|+|.+++..... .++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999986543 45667889999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCc-----------eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCcccccccc
Q 008893 371 FGLAKLLDHCDSH-----------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA 439 (549)
Q Consensus 371 fg~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~ 439 (549)
||+|+.+...... .....+||+.|||||++.+..|+.++|||||||++|||++ ||.... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------~ 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------E 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------H
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------H
Confidence 9999877543221 1234579999999999999999999999999999999996 664210 0
Q ss_pred HHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 440 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
....+..... .... .......+.+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~-~~~p---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 RVRTLTDVRN-LKFP---------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHHT-TCCC---------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhc-CCCC---------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111111111 0000 0011223557789999999999999999999863
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.6e-49 Score=401.16 Aligned_cols=267 Identities=18% Similarity=0.266 Sum_probs=202.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEec------CCc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT------TTE 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 298 (549)
++|++.+.||+|+||+||+|... +|+.||||+++..... .....+.+|+++|+.++|||||++++++.. ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57899999999999999999975 6999999999755432 223468899999999999999999999764 356
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
.|+||||++ |+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999996 68999998888999999999999999999999999 99999999999999999999999999998764
Q ss_pred CCC---CceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc----
Q 008893 379 HCD---SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE---- 450 (549)
Q Consensus 379 ~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 450 (549)
... .......+||+.|+|||++.+. .++.++||||+||++|||+||+.||...........+..........
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 322 1233456799999999998875 46999999999999999999999997543222111111100000000
Q ss_pred ---cchhhhcccc-ccCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 451 ---KKLEMLVDKD-LKNNYD-----RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 451 ---~~~~~~~d~~-l~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.......... .....+ .....++.+|+.+||+.||++|||++|+++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000 000000 1123568899999999999999999999864
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.2e-47 Score=388.53 Aligned_cols=199 Identities=25% Similarity=0.386 Sum_probs=171.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC----CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCce
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTER 299 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 299 (549)
..++|++.+.||+|+||+||+|+.+ .++.||+|.+.... ...++.+|++++..+ +||||+++++++.+.+..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4578999999999999999999853 46789999986543 345688999999988 699999999999999999
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCC-CceEEeecccccccC
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-YEAVVGDFGLAKLLD 378 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~~~~~~ 378 (549)
++||||+++|+|.++++ .+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 96 ~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 99999999999999984 489999999999999999999999 99999999999999876 799999999998654
Q ss_pred CCCC---------------------------ceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCccccc
Q 008893 379 HCDS---------------------------HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEF 430 (549)
Q Consensus 379 ~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~ 430 (549)
.... ......+||+.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 3211 112334699999999999876 489999999999999999999999975
Q ss_pred Cc
Q 008893 431 GK 432 (549)
Q Consensus 431 ~~ 432 (549)
+.
T Consensus 250 ~~ 251 (361)
T 4f9c_A 250 AS 251 (361)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.7e-47 Score=378.24 Aligned_cols=278 Identities=40% Similarity=0.680 Sum_probs=238.4
Q ss_pred CHHHHHHHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC
Q 008893 218 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 297 (549)
Q Consensus 218 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 297 (549)
.+.++..++++|+..+.||+|+||.||+|.+++|+.||||++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3344455778999999999999999999998889999999987653 334567999999999999999999999999999
Q ss_pred ceeeEeeccCCCchhhhhccCC----CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeeccc
Q 008893 298 ERLLVYPYMSNGSVASRLKAKP----SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 373 (549)
Q Consensus 298 ~~~lv~e~~~~g~L~~~l~~~~----~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 373 (549)
..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999996432 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccc
Q 008893 374 AKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 452 (549)
Q Consensus 374 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (549)
++....... .......||+.|+|||.+.+..++.++||||||+++|||+||+.||....... ......|.........
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE-MVNLAEWAVESHNNGQ 264 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS-CCCHHHHTHHHHTTTC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH-HHHHHHHhhhcccccc
Confidence 986543222 22334568999999999999999999999999999999999999997544332 2345566655555666
Q ss_pred hhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 453 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 453 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
+...+++.+........+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 677777777777888889999999999999999999999999999986
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=9.7e-47 Score=402.08 Aligned_cols=249 Identities=24% Similarity=0.277 Sum_probs=201.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHH---HHHHhhccCCCccceEEEEecCCcee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTE---VEMISLAVHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e---~~~l~~l~h~niv~l~~~~~~~~~~~ 300 (549)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. .......+.+| +.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999976 59999999996432 11223334444 55666778999999999999999999
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
+||||++||+|.+++...+.+++..+..++.||+.||.|||++ +||||||||+||||+.+|.+||+|||+|+.+...
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 9999999999999998888899999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
. ....+||+.|||||++.. ..|+.++|||||||++|||+||+.||........ .......... .
T Consensus 346 ~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~----~~i~~~i~~~-------~- 410 (689)
T 3v5w_A 346 K---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTLTM-------A- 410 (689)
T ss_dssp C---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH----HHHHHHHHHC-------C-
T ss_pred C---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhhcCC-------C-
Confidence 2 334679999999999975 5799999999999999999999999975332211 1111111110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVR 496 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 496 (549)
..++...+.++.+++.+||+.||++|++ ++||++
T Consensus 411 ---~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 411 ---VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ---CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1122233467899999999999999998 567664
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.1e-46 Score=401.92 Aligned_cols=251 Identities=20% Similarity=0.273 Sum_probs=207.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
++|++.+.||+|+||+||+|..+ +|+.||+|++..... .....+.+|+.+|+.++|||||++++++.+....++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 57999999999999999999976 699999999976442 2345688999999999999999999999999999999999
Q ss_pred cCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCC--CceEEeecccccccCCCCC
Q 008893 306 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY--YEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 306 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl~Dfg~~~~~~~~~~ 382 (549)
|++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 999999999864 45799999999999999999999999 99999999999999854 89999999999987643
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .....+..... -+.....
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-------~~~~~i~~~~~---~~~~~~~ 380 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-------ETLRNVKSCDW---NMDDSAF 380 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTTCC---CCCSGGG
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-------HHHHHHHhCCC---CCCcccc
Confidence 2334557999999999999999999999999999999999999999743321 11112111110 0111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
. ..+.++.+|+.+||+.||++|||+.|+++|
T Consensus 381 ~----~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 S----GISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c----CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 223678899999999999999999999874
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-45 Score=370.75 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=200.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|++.+.||+|+||+||+|... +|+.||||++...........+.+|+++++.++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 467899999999999999999974 6999999999765543444568999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
|+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||++..........
T Consensus 89 ~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 89 YCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999999998777899999999999999999999999 99999999999999999999999999998665443333
Q ss_pred eeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 385 TTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
.....||+.|+|||.+.+..+ +.++|||||||++|+|++|+.||..... ......+.... .
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-----------~ 227 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------MALYKKIMRGK-----------Y 227 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-----------C
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-----------C
Confidence 445679999999999988775 8999999999999999999999974321 11112221110 0
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..+...+..+.+++.+||+.||++|||++|++++
T Consensus 228 ~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 228 DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1112233668899999999999999999999864
No 23
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-43 Score=351.54 Aligned_cols=279 Identities=40% Similarity=0.681 Sum_probs=230.1
Q ss_pred CccccCHHHHHHHhcCCCCC------CeeeeeCCeEEEEEEECCCCEEEEEEcccCCC---CCcHHHHHHHHHHHhhccC
Q 008893 213 NLKRFHFKELQSATSNFSSK------NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLAVH 283 (549)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~------~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h 283 (549)
....|++.++..++++|... +.||+|+||.||+|.. +++.||||++..... ......+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45778999999999999887 9999999999999987 588999999875432 2234579999999999999
Q ss_pred CCccceEEEEecCCceeeEeeccCCCchhhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee
Q 008893 284 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 360 (549)
Q Consensus 284 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 360 (549)
|||+++++++...+..++||||+++++|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999999886 345699999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCcccccccc
Q 008893 361 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA 439 (549)
Q Consensus 361 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~ 439 (549)
++++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|+|+||+.||........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--- 242 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--- 242 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB---
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH---
Confidence 99999999999999876543322 2334569999999998864 588999999999999999999999976443322
Q ss_pred HHHHHHHHhh-ccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 440 MLDWVKKIHQ-EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 440 ~~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
+..+...... ...+...+++.+ ...+...+..+.+++.+||+.||++|||+++++++|+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 2222222222 222344444443 34567778899999999999999999999999999986
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.3e-44 Score=369.62 Aligned_cols=255 Identities=27% Similarity=0.414 Sum_probs=209.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC--------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecC
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 296 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 296 (549)
.++|.+.+.||+|+||.||+|.+. ++..||||+++..........+.+|+.+++.+ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357888999999999999999852 35679999998664434455799999999999 899999999999999
Q ss_pred CceeeEeeccCCCchhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee
Q 008893 297 TERLLVYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 360 (549)
Q Consensus 297 ~~~~lv~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 360 (549)
+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 9999999999999999998743 2489999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccc
Q 008893 361 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 438 (549)
Q Consensus 361 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 438 (549)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 99999999999999876543322 2233457889999999999999999999999999999999 99998743221
Q ss_pred cHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 439 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.+... .... .....+...+..+.+++.+||+.||++||++.|+++.|+.
T Consensus 313 ~~~~~---~~~~----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 313 ELFKL---LKEG----------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp GHHHH---HHTT----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHH---HhcC----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11111 1111 1111222334679999999999999999999999999986
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.3e-43 Score=351.46 Aligned_cols=251 Identities=19% Similarity=0.276 Sum_probs=207.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|+..+.||+|+||+||+|.. .+|+.||||++..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 35799999999999999999996 4689999999875442 345678999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
|+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 98 ~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 99999999999765 589999999999999999999999 999999999999999999999999999987654332 2
Q ss_pred eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCC
Q 008893 385 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 464 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 464 (549)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ............ . ..
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~~-~-------~~ 237 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGTP-E-------LQ 237 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHCSC-C-------CS
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCC-C-------CC
Confidence 34456999999999999999999999999999999999999999643211 111111111100 0 01
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 465 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 465 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.+...+..+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 112234678999999999999999999999863
No 26
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=354.54 Aligned_cols=272 Identities=16% Similarity=0.193 Sum_probs=216.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC--ceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--ERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 303 (549)
++|.+.+.||+|+||+||+|... +|+.||||+++..........+.+|+++++.++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999976 489999999986554455667889999999999999999999998765 679999
Q ss_pred eccCCCchhhhhccCC---CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee----cCCCceEEeecccccc
Q 008893 304 PYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVVGDFGLAKL 376 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~~~~ 376 (549)
||+++++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997533 399999999999999999999999 99999999999999 7888899999999987
Q ss_pred cCCCCCceeeccccccCccCchhhc--------cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHh
Q 008893 377 LDHCDSHVTTAVRGTVGHIAPEYLS--------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 448 (549)
Q Consensus 377 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 448 (549)
...... .....||+.|+|||++. +..++.++|||||||++|||+||+.||..............-+....
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 654332 23456999999999986 56789999999999999999999999975433322221111111111
Q ss_pred hccchhhhc-----------cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCCC
Q 008893 449 QEKKLEMLV-----------DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 503 (549)
Q Consensus 449 ~~~~~~~~~-----------d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 503 (549)
.......+. +..............+.+++.+||+.||++|||++|++++..++..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 100000000 0011124557778889999999999999999999999999987543
No 27
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.5e-44 Score=362.90 Aligned_cols=249 Identities=21% Similarity=0.300 Sum_probs=207.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|.+.+.||+|+||.||+|.+ .+|+.||||++...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788999999999999999997 47999999999754322 23446889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-- 168 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC--
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC--
Confidence 9999999999998777899999999999999999999999 99999999999999999999999999998765332
Q ss_pred eeeccccccCccCchhhccCCCC-CcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||.+.+..++ .++|||||||++|||+||+.||..... ...........
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~----------- 230 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-------KELRERVLRGK----------- 230 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-----------
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-----------
Confidence 23455799999999999888875 789999999999999999999974321 11111111110
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01112234678899999999999999999999864
No 28
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7e-44 Score=355.59 Aligned_cols=253 Identities=28% Similarity=0.422 Sum_probs=207.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
++|...+.||+|+||+||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 56788899999999999999975 58999999886532 23345799999999999999999999999999999999999
Q ss_pred cCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 306 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 306 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999975 56799999999999999999999999 99999999999999999999999999998764332211
Q ss_pred -------------eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccc--cHHHHHHHHhh
Q 008893 385 -------------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG--AMLDWVKKIHQ 449 (549)
Q Consensus 385 -------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~ 449 (549)
.....||+.|+|||.+.+..++.++||||||+++|||++|..|+.......... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~------ 239 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF------ 239 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH------
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc------
Confidence 114569999999999999999999999999999999999999987533222111 11111
Q ss_pred ccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 450 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 450 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.+... +...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 240 -------~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~ 279 (310)
T 3s95_A 240 -------LDRYC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET 279 (310)
T ss_dssp -------HHHTC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -------ccccC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111 11223568899999999999999999999998886
No 29
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.4e-44 Score=357.58 Aligned_cols=256 Identities=28% Similarity=0.398 Sum_probs=201.9
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
...++|++.+.||+|+||+||+|.. +|+.||||++...... .....+.+|+.++++++||||+++++++......++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788999999999999999987 4889999999765422 2234688999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCCC---CCHHHHHHHHHHHHHHHHHhhhcCCCc--eEecccCcCeeeecCCCceEEeeccccccc
Q 008893 303 YPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGDFGLAKLL 377 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~---l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 377 (549)
|||+++|+|.+++..... +++..+..++.||+.||.|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999986553 99999999999999999999998 8 999999999999999999999999999865
Q ss_pred CCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhc
Q 008893 378 DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 457 (549)
Q Consensus 378 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (549)
.... .......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ..........
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-------~~~~~~~~~~------ 255 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-------QVVAAVGFKC------ 255 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHHSC------
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcC------
Confidence 4322 2233456999999999999999999999999999999999999999643211 1111111000
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 458 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 458 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 256 ---~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~ 295 (309)
T 3p86_A 256 ---KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP 295 (309)
T ss_dssp ---CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 0111222334678999999999999999999999999886
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2e-44 Score=362.02 Aligned_cols=254 Identities=26% Similarity=0.398 Sum_probs=207.3
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC----CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
++|.+.+.||+|+||.||+|.+. .+..||||+++..........+.+|+.+++.++||||+++++++...+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56788899999999999999974 34569999998655444456799999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 303 YPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999643 5799999999999999999999999 99999999999999999999999999998775433
Q ss_pred Cc--eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 382 SH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 382 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
.. ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +........
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-------~~~~~~~~~-------- 270 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-------DVISSVEEG-------- 270 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-------HHHHHHHTT--------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHHcC--------
Confidence 22 2223346788999999999999999999999999999999 99998643211 111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 271 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~ 310 (325)
T 3kul_A 271 --YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310 (325)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1111222334679999999999999999999999999986
No 31
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.9e-44 Score=349.67 Aligned_cols=254 Identities=26% Similarity=0.395 Sum_probs=211.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
.++|++.+.||+|+||.||+|..+++..||+|+++... .....+.+|+.++..++||||+++++++......++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 35788899999999999999999988899999997654 2346789999999999999999999999999999999999
Q ss_pred cCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 306 MSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 306 ~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999999999754 3599999999999999999999999 99999999999999999999999999998776544333
Q ss_pred eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 385 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
.....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .......... ..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~----------~~ 224 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-------EVVLKVSQGH----------RL 224 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTC----------CC
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-------HHHHHHHcCC----------CC
Confidence 444557788999999999899999999999999999999 99998643221 1111111111 00
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
..+...+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (268)
T 3sxs_A 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262 (268)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 11112236789999999999999999999999999874
No 32
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-44 Score=351.18 Aligned_cols=252 Identities=28% Similarity=0.449 Sum_probs=210.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeecc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 306 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 306 (549)
++|+..+.||+|+||.||+|...+++.||+|++.... .....+.+|+.++++++||||+++++++.+....++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 5688889999999999999999889999999997654 23467999999999999999999999999999999999999
Q ss_pred CCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCcee
Q 008893 307 SNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 385 (549)
Q Consensus 307 ~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 385 (549)
++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 99999999964 44689999999999999999999999 999999999999999999999999999987654322233
Q ss_pred eccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccccCC
Q 008893 386 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 464 (549)
Q Consensus 386 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 464 (549)
....+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||...... ......... ....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-------~~~~~~~~~----------~~~~ 227 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-------EVVEDISTG----------FRLY 227 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTT----------CCCC
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-------HHHHHHhcC----------ccCC
Confidence 34457788999999999999999999999999999999 99998643211 111111111 0111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 465 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 465 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.+...+..+.+++.+|++.||++||++.|++++|+.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 122234678999999999999999999999999986
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.4e-43 Score=350.92 Aligned_cols=262 Identities=19% Similarity=0.257 Sum_probs=213.3
Q ss_pred cccCHHHHHHHhcC----------CCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccC
Q 008893 215 KRFHFKELQSATSN----------FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 283 (549)
Q Consensus 215 ~~~~~~~~~~~~~~----------~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h 283 (549)
..++++++..+++. |+..+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCC
Confidence 34677777777654 666779999999999999986 69999999997544 3445678899999999999
Q ss_pred CCccceEEEEecCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCC
Q 008893 284 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY 363 (549)
Q Consensus 284 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 363 (549)
|||+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.+
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC
Confidence 99999999999999999999999999999998754 599999999999999999999999 99999999999999999
Q ss_pred CceEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHH
Q 008893 364 YEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDW 443 (549)
Q Consensus 364 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~ 443 (549)
+.+||+|||++........ ......||+.|+|||.+.+..++.++||||||+++|||+||+.||..... ...
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-------~~~ 249 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQA 249 (321)
T ss_dssp CCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHH
T ss_pred CcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHH
Confidence 9999999999987654322 23345699999999999999999999999999999999999999964321 111
Q ss_pred HHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 444 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 444 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
........ .+.+. .....+..+.+++.+||+.||++|||+.|++++
T Consensus 250 ~~~~~~~~------~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRDSP------PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHSS------CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhcCC------CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111110 01110 011223678899999999999999999999874
No 34
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.6e-44 Score=359.67 Aligned_cols=253 Identities=23% Similarity=0.347 Sum_probs=204.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
++|++.+.||+|+||+||+|... +++.||||++...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57889999999999999999976 68999999997654444445688999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC-ce
Q 008893 306 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-HV 384 (549)
Q Consensus 306 ~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~ 384 (549)
+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.+..... ..
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 99999999999888899999999999999999999999 999999999999999999999999999986643222 12
Q ss_pred eeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 385 TTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
.....||+.|+|||++.+..+ +.++|||||||++|||+||+.||........ ....|.. .... .
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~~----~~~~---~------ 228 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWKE----KKTY---L------ 228 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH--HHHHHHT----TCTT---S------
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHHhc----cccc---C------
Confidence 234569999999999988775 7789999999999999999999975332211 1111110 0000 0
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.........+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0011223668899999999999999999999864
No 35
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1e-44 Score=369.25 Aligned_cols=265 Identities=26% Similarity=0.381 Sum_probs=213.6
Q ss_pred cCHHHHHHHhcCCCCCCeeeeeCCeEEEEEEE------CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccce
Q 008893 217 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRL 289 (549)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 289 (549)
+...+++...++|.+.+.||+|+||.||+|.+ .+++.||||+++..........+.+|++++..+ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455566778999999999999999999984 246799999998655444455799999999999 79999999
Q ss_pred EEEEecCCc-eeeEeeccCCCchhhhhccCCC------------------------------------------------
Q 008893 290 IGFCMTTTE-RLLVYPYMSNGSVASRLKAKPS------------------------------------------------ 320 (549)
Q Consensus 290 ~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------ 320 (549)
++++...+. .++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 8999999999999999975432
Q ss_pred ------------------CCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 321 ------------------LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 321 ------------------l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 89999999999999999999999 999999999999999999999999999987644332
Q ss_pred -ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 383 -HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 383 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
.......||+.|+|||++.+..++.++||||||+++|||+| |+.||........ ... ......
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~~---~~~~~~--------- 313 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR---RLKEGT--------- 313 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH---HHH---HHHHTC---------
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH---HHH---HHHcCC---------
Confidence 23344568999999999999999999999999999999999 9999975332111 111 111100
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 314 -~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 314 -RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352 (359)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 111122233678999999999999999999999999986
No 36
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.2e-44 Score=353.78 Aligned_cols=259 Identities=24% Similarity=0.287 Sum_probs=206.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC--cHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|++.+.||+|+||.||+|... +++.||+|.+....... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57889999999999999999965 68999999986543322 2346899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 9999999999998877899999999999999999999999 9999999999999999999999999999876544333
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......... .... ....
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~-~~~~-~~~~-- 236 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDS-VPNV-TTDV-- 236 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHSSC-CCCH-HHHS--
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhhcc-CCCc-chhc--
Confidence 344556999999999999999999999999999999999999999743221 1111111110 0000 0011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHhcC
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRP-KMSEVVRMLEGD 501 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~ 501 (549)
....+..+.+++.+|++.||++|| +++++.+.|+..
T Consensus 237 --~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 237 --RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp --CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred --ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 112236789999999999999999 899999988863
No 37
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3e-44 Score=367.28 Aligned_cols=254 Identities=28% Similarity=0.413 Sum_probs=198.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC----CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
++|++.+.||+|+||.||+|... ++..||||+++..........|.+|+.++++++||||+++++++......++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57899999999999999999865 57789999997654334455799999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 303 YPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|||+++|+|.++++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999754 4699999999999999999999999 99999999999999999999999999998765432
Q ss_pred Cce--eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 382 SHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 382 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+........
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-------~~~~~~i~~~-------- 266 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-------QDVIKAVDEG-------- 266 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-------HHHHHHHHTT--------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcC--------
Confidence 221 122235778999999999999999999999999999998 9999864321 1111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.....+...+..+.+++.+||+.||++||++.||++.|+.
T Consensus 267 --~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~ 306 (373)
T 2qol_A 267 --YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306 (373)
T ss_dssp --EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence 1111122334679999999999999999999999999986
No 38
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.3e-44 Score=374.10 Aligned_cols=264 Identities=19% Similarity=0.215 Sum_probs=212.0
Q ss_pred CHHHHHHHhcCCCCCCeeeeeCCeEEEEEEECC-CCEEEEEEcccCCC--CCcHHHHHHHHHHHhhccCCCccceEEEEe
Q 008893 218 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCM 294 (549)
Q Consensus 218 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 294 (549)
.+.++....++|++.+.||+|+||+||+|..+. ++.||+|+++.... ......+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 345556677899999999999999999999874 78999999964211 112224789999999999999999999999
Q ss_pred cCCceeeEeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeeccc
Q 008893 295 TTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 373 (549)
Q Consensus 295 ~~~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 373 (549)
+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999999986 56799999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccCccCchhhc-----cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHh
Q 008893 374 AKLLDHCDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 448 (549)
Q Consensus 374 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 448 (549)
++.............+||+.|+|||++. ...++.++|||||||++|||+||+.||........ ...+.
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-------~~~i~ 294 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-------YGKIM 294 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HHHHH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-------HHhhh
Confidence 9876654444445567999999999987 45689999999999999999999999975332111 11111
Q ss_pred hccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 008893 449 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSL--RPKMSEVVRM 497 (549)
Q Consensus 449 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 497 (549)
.... ...-+.... ..+..+.+++.+|+..+|++ ||+++|++++
T Consensus 295 ~~~~--~~~~p~~~~----~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 295 NHKE--RFQFPTQVT----DVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp THHH--HCCCCSSCC----CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hccc--cccCCcccc----cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1000 000010001 12367889999999988888 9999999874
No 39
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.4e-44 Score=370.54 Aligned_cols=255 Identities=26% Similarity=0.395 Sum_probs=207.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|.+.+.||+|+||.||+|.+. +++.||||+++..........|.+|+++++.++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888899999999999999986 6899999999765432333468899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 305 YMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 305 ~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999753 4699999999999999999999999 9999999999999999999999999999865432111
Q ss_pred ee-eccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 384 VT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 384 ~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
.. ....++..|+|||.+.+..++.++|||||||++|||+| |..||...... .... ..... .
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----~~~~---~~~~~----------~ 332 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----QTRE---FVEKG----------G 332 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----HHHH---HHHTT----------C
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH---HHHcC----------C
Confidence 11 12235778999999999999999999999999999999 99998643211 1111 11111 1
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 333 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 371 (377)
T 3cbl_A 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371 (377)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 111222334678999999999999999999999999986
No 40
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.9e-43 Score=354.57 Aligned_cols=253 Identities=22% Similarity=0.254 Sum_probs=208.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-----cHHHHHHHHHHHhhccCCCccceEEEEecCCce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 299 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 299 (549)
.+.|++.+.||+|+||.||+|... +|+.||+|+++...... ....+.+|+.++..++||||+++++++......
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457889999999999999999976 58999999997654321 246789999999999999999999999999999
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC----ceEEeeccccc
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAK 375 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfg~~~ 375 (549)
++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||+++++ .+||+|||+++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999999998888899999999999999999999999 999999999999998777 79999999998
Q ss_pred ccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhh
Q 008893 376 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 455 (549)
Q Consensus 376 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (549)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... .....+.....
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-------~~~~~i~~~~~--- 235 (361)
T 2yab_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANITAVSY--- 235 (361)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTTCC---
T ss_pred EcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcCC---
Confidence 765432 233456999999999999999999999999999999999999999643211 11111111100
Q ss_pred hccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 456 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 456 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
-+++..... .+..+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 236 DFDEEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CCCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCchhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001111111 23668899999999999999999999863
No 41
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.9e-44 Score=360.34 Aligned_cols=266 Identities=27% Similarity=0.336 Sum_probs=206.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC----ceee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT----ERLL 301 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~l 301 (549)
.++|++.+.||+|+||+||+|... ++.||||++.... .....+..|+.+++.++||||+++++++.... ..++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 357889999999999999999886 7899999996542 22335667888899999999999999998754 3699
Q ss_pred EeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcC-------CCceEecccCcCeeeecCCCceEEeecccc
Q 008893 302 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-------DPKIIHRDVKAANILLDEYYEAVVGDFGLA 374 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 374 (549)
||||+++|+|.+++... .+++..+..++.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 100 v~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 99999999999999765 4999999999999999999999752 348999999999999999999999999999
Q ss_pred cccCCCCCc-eeeccccccCccCchhhccC-----CCCCcccchhHhHHHHHHHhCCcccccCccccccc---------c
Q 008893 375 KLLDHCDSH-VTTAVRGTVGHIAPEYLSTG-----QSSEKTDVFGFGILLLELISGLRALEFGKTANQKG---------A 439 (549)
Q Consensus 375 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~---------~ 439 (549)
+........ ......||+.|+|||.+.+. .++.++|||||||++|||+||+.||.......... .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 876543322 22335699999999999863 45668899999999999999999997543322111 1
Q ss_pred HHHHHHHHhhccchhhhccccccCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 440 MLDWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...+........ ..+.+... .....+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 259 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 259 LEDMQEVVVHKK-----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp HHHHHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hhhhhhhhhccc-----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111111111 01111110 112345779999999999999999999999999986
No 42
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.8e-44 Score=351.32 Aligned_cols=253 Identities=23% Similarity=0.364 Sum_probs=207.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
.++|++.+.||+|+||+||+|.+.++..||+|+++... .....+.+|++++..++||||+++++++......++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 45788889999999999999999988899999997654 2346789999999999999999999999999999999999
Q ss_pred cCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 306 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 306 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 999999999975 45799999999999999999999999 99999999999999999999999999998765432222
Q ss_pred eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 385 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
.....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ......... ...
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-------~~~~~~~~~----------~~~ 240 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-------ETAEHIAQG----------LRL 240 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTT----------CCC
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-------HHHHHHhcc----------cCC
Confidence 333457788999999999999999999999999999999 99998643221 111111111 011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
..+...+..+.+++.+||+.||++|||++|++++|++
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 277 (283)
T 3gen_A 241 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277 (283)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 1112223678999999999999999999999999986
No 43
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.3e-43 Score=357.12 Aligned_cols=249 Identities=23% Similarity=0.254 Sum_probs=208.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|++.+.||+|+||+||+|..+ +|+.||+|+++... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999976 68999999997532 2234557889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~ 160 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC-CC
Confidence 9999999999998777899999999999999999999999 9999999999999999999999999999864322 22
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... .
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-----------~ 222 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------ERLFELILMEE-----------I 222 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-----------C
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-------HHHHHHHHcCC-----------C
Confidence 33456799999999999999999999999999999999999999964321 11111111110 0
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRM 497 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 497 (549)
.++...+..+.+++.+||+.||++|| +++|++++
T Consensus 223 ~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 223 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 12223346789999999999999999 89998865
No 44
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-43 Score=354.09 Aligned_cols=264 Identities=21% Similarity=0.245 Sum_probs=201.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|++.+.||+|+||+||+|...+|+.||+|++....... ....+.+|+.+++.++||||+++++++......++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788999999999999999999889999999997543322 23568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 305 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 305 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
|+++ +|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9985 77777754 44699999999999999999999999 999999999999999999999999999987653322
Q ss_pred eeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc--chhh-----
Q 008893 384 VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK--KLEM----- 455 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----- 455 (549)
......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||......... ........... ....
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL---PKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH---HHHHHHHCCCCTTTSGGGTTSH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHHCCCChHHhhhhhccc
Confidence 2334468999999999876 56899999999999999999999999754433221 11111110000 0000
Q ss_pred -h-------ccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 456 -L-------VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 456 -~-------~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
. .+.............++.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 00000000011123578899999999999999999999863
No 45
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1e-43 Score=357.11 Aligned_cols=254 Identities=23% Similarity=0.394 Sum_probs=200.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCC----EEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGT----VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
++|+..+.||+|+||+||+|.+. +++ .||+|.++..........+.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46888899999999999999964 344 468888876555555678999999999999999999999998754 789
Q ss_pred EeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 302 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
++||+.+|+|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 9999999999999875 45799999999999999999999999 9999999999999999999999999999877543
Q ss_pred CCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 381 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 381 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....... +...+.
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~~------------- 233 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSILE------------- 233 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHHHH-------------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH----HHHHHH-------------
Confidence 332 2233457889999999999999999999999999999999 999997432211 111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
.......+...+..+.+++.+||+.||++||++.|++++|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 234 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111112223346799999999999999999999999999863
No 46
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-44 Score=360.53 Aligned_cols=258 Identities=26% Similarity=0.380 Sum_probs=208.7
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEE------CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecC
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 296 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 296 (549)
...++|.+.+.||+|+||.||+|.. .++..||||+++..........+.+|+.++.++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457889999999999999999996 245689999998654444456799999999999 899999999999999
Q ss_pred CceeeEeeccCCCchhhhhccCC-----------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEeccc
Q 008893 297 TERLLVYPYMSNGSVASRLKAKP-----------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 353 (549)
Q Consensus 297 ~~~~lv~e~~~~g~L~~~l~~~~-----------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 353 (549)
+..++||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 99999999999999999997542 379999999999999999999999 9999999
Q ss_pred CcCeeeecCCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccC
Q 008893 354 KAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFG 431 (549)
Q Consensus 354 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~ 431 (549)
||+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999876543322 2334557889999999999999999999999999999998 99999753
Q ss_pred ccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 432 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.... .....+ ... .....+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 279 ~~~~---~~~~~~----~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 331 (344)
T 1rjb_A 279 PVDA---NFYKLI----QNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 331 (344)
T ss_dssp CCSH---HHHHHH----HTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CcHH---HHHHHH----hcC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 3211 111111 111 1111122234679999999999999999999999999987
No 47
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.4e-43 Score=353.77 Aligned_cols=256 Identities=27% Similarity=0.379 Sum_probs=210.3
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEE------CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCc
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 298 (549)
..++|.+.+.||+|+||.||+|.. .+++.||||+++..........+.+|+.+++.++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 346788899999999999999986 23579999999865544445678999999999999999999999999999
Q ss_pred eeeEeeccCCCchhhhhccCC------------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKP------------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVK 354 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~------------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 354 (549)
.++||||+++|+|.+++.... .+++..+..++.||+.||.|||++ +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 999999999999999997543 389999999999999999999999 99999999
Q ss_pred cCeeeecCCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCc
Q 008893 355 AANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGK 432 (549)
Q Consensus 355 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~ 432 (549)
|+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876543332 1223457889999999999899999999999999999999 999986433
Q ss_pred cccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 433 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.. .+...+. . . .....+...+..+.+++.+||+.||++||++.|++++|+.
T Consensus 258 ~~----~~~~~~~---~-~---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 258 PE----RLFNLLK---T-G---------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp GG----GHHHHHH---T-T---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH----HHHHHhh---c-C---------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 21 1111111 1 0 0111122234679999999999999999999999999986
No 48
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=363.55 Aligned_cols=255 Identities=29% Similarity=0.399 Sum_probs=209.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC--------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecC
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 296 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 296 (549)
.++|.+.+.||+|+||+||+|... .+..||||+++..........+.+|+++++.+ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357888899999999999999852 24579999998665444456789999999999 899999999999999
Q ss_pred CceeeEeeccCCCchhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee
Q 008893 297 TERLLVYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 360 (549)
Q Consensus 297 ~~~~lv~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 360 (549)
+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 9999999999999999999743 3599999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccccccCCCCC-ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccc
Q 008893 361 DEYYEAVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 438 (549)
Q Consensus 361 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 438 (549)
++++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9999999999999987654332 22333457889999999999999999999999999999999 9999864321
Q ss_pred cHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 439 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
........... ....+...+..+.+++.+||+.||++|||++|++++|+.
T Consensus 300 --~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 349 (382)
T 3tt0_A 300 --EELFKLLKEGH----------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349 (382)
T ss_dssp --HHHHHHHHTTC----------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --HHHHHHHHcCC----------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11112111111 111122234679999999999999999999999999986
No 49
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=354.54 Aligned_cols=252 Identities=20% Similarity=0.248 Sum_probs=207.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-----CcHHHHHHHHHHHhhccCCCccceEEEEecCCcee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-----GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 300 (549)
++|.+.+.||+|+||.||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++......+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46888999999999999999976 5899999999754322 13567999999999999999999999999999999
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC----ceEEeecccccc
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAKL 376 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfg~~~~ 376 (549)
+||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999999998888899999999999999999999999 999999999999999887 899999999987
Q ss_pred cCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhh
Q 008893 377 LDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 456 (549)
Q Consensus 377 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (549)
..... ......||+.|+|||.+.+..++.++|||||||++|+|+||+.||...... ........... .
T Consensus 168 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~---~ 235 (326)
T 2y0a_A 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANVSAVNY---E 235 (326)
T ss_dssp CCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHHTCC---C
T ss_pred CCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-------HHHHHHHhcCC---C
Confidence 65332 223456999999999999999999999999999999999999999643211 11111111000 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 457 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 457 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
....... ..+..+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 FEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000001 123568899999999999999999999874
No 50
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.5e-43 Score=348.13 Aligned_cols=254 Identities=22% Similarity=0.364 Sum_probs=196.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECC----CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
.++|++.+.||+|+||.||+|.... +..||+|+++..........+.+|+.+++.++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4578889999999999999998743 45799999876544344557899999999999999999999984 467899
Q ss_pred EeeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 302 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999754 3699999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.........+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... .... .......
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~~---~i~~~~~------- 235 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIG---RIENGER------- 235 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHH---HHHTTCC-------
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHHH---HHHcCCC-------
Confidence 3333334457889999999999999999999999999999997 99998743321 1111 1111110
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...+...+..+.+++.+|++.||++|||+.|++++|+.
T Consensus 236 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 273 (281)
T 1mp8_A 236 ---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 273 (281)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11122334678999999999999999999999999986
No 51
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.6e-43 Score=346.62 Aligned_cols=265 Identities=19% Similarity=0.226 Sum_probs=203.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
++|++.+.||+|+||+||+|... +|+.||||+++...... ....+.+|+.+++.++||||+++++++......++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999976 58999999997654333 23578899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
|++++.+..+......+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 157 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-C 157 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-C
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-c
Confidence 998644444444567899999999999999999999999 999999999999999999999999999987653322 2
Q ss_pred eeccccccCccCchhhccCC-CCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc--cch---hhhcc
Q 008893 385 TTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--KKL---EMLVD 458 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~d 458 (549)
.....||+.|+|||.+.+.. ++.++|||||||++|||+||+.|+........ .+.......... ... ....+
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHHhCCCChhhhhhhccccc
Confidence 33456899999999998766 79999999999999999999988754322111 111111111000 000 00000
Q ss_pred c---------cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 459 K---------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 459 ~---------~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
. .............+.+++.+|++.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 00011112234678899999999999999999999863
No 52
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.8e-43 Score=347.80 Aligned_cols=260 Identities=27% Similarity=0.379 Sum_probs=201.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhh--ccCCCccceEEEEecC----Cce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTT----TER 299 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~ 299 (549)
.++|++.+.||+|+||+||+|.. +|+.||||++... ....+..|.+++.. ++||||+++++++... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46789999999999999999998 5899999998643 23456667776665 7999999999987543 457
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCceEecccCcCeeeecCCCceEEeec
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEYYEAVVGDF 371 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 371 (549)
++||||+++|+|.++++.. .+++..+..++.||+.||.||| +. +|+||||||+|||++.++.+||+||
T Consensus 82 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEehhhccCCCHHHHHhhc-ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 8999999999999999654 6999999999999999999999 77 9999999999999999999999999
Q ss_pred ccccccCCCCCce---eeccccccCccCchhhccC------CCCCcccchhHhHHHHHHHhC----------CcccccCc
Q 008893 372 GLAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISG----------LRALEFGK 432 (549)
Q Consensus 372 g~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~il~elltg----------~~p~~~~~ 432 (549)
|+++......... .....||+.|+|||.+.+. .++.++||||||+++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9998765443322 2234699999999999876 445799999999999999999 77775432
Q ss_pred cccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 433 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
..... ................+. ........+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 238 ~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 238 PNDPS--FEDMRKVVCVDQQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp CSSCC--HHHHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred CCCcc--hhhhhHHHhccCCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 22211 111111111111111100 011233466889999999999999999999999999975
No 53
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-43 Score=372.96 Aligned_cols=257 Identities=23% Similarity=0.384 Sum_probs=211.4
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 222 LQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 222 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
++...++|.+.+.||+|+||+||+|.++++..||||+++... .....|.+|+.+++.++||||+++++++. .+..++
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 344567788999999999999999999888999999997643 34668999999999999999999999986 567899
Q ss_pred EeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 302 VYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
||||+++|+|.++++.. ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999999999753 3689999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
..........+|..|+|||.+....++.++|||||||++|||+| |+.||..... .+....+....
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i~~~~------- 402 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------PEVIRALERGY------- 402 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHHHTC-------
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCC-------
Confidence 22122233346788999999999999999999999999999999 9999964321 11111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
....+...+..+.+++.+||+.||++|||+++|++.|+..
T Consensus 403 ---~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 403 ---RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 1111223346799999999999999999999999999873
No 54
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-43 Score=358.46 Aligned_cols=257 Identities=26% Similarity=0.414 Sum_probs=210.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCc
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 298 (549)
..++|++.+.||+|+||.||+|... +++.||||+++..........+.+|+.+++.++||||+++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999974 3489999999865543445579999999999999999999999999999
Q ss_pred eeeEeeccCCCchhhhhccC------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccC
Q 008893 299 RLLVYPYMSNGSVASRLKAK------------------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVK 354 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 354 (549)
.++||||+++|+|.+++... ..+++..++.++.||+.||.|||+. +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999998642 5699999999999999999999999 99999999
Q ss_pred cCeeeecCCCceEEeecccccccCCCCC-ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCc
Q 008893 355 AANILLDEYYEAVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGK 432 (549)
Q Consensus 355 p~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~ 432 (549)
|+||+++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999986543221 12234458899999999999999999999999999999999 999986432
Q ss_pred cccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 433 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
. .......... .. ...+...+..+.+++.+||+.||++||++.+++++|+..
T Consensus 282 ~-------~~~~~~~~~~-~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~ 333 (343)
T 1luf_A 282 H-------EEVIYYVRDG-NI---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333 (343)
T ss_dssp H-------HHHHHHHHTT-CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred h-------HHHHHHHhCC-Cc---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 1 1111111111 11 111222346799999999999999999999999999973
No 55
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.1e-43 Score=352.10 Aligned_cols=262 Identities=23% Similarity=0.344 Sum_probs=190.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|++.+.||+|+||.||+|... +|+.||+|+++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999965 5899999999765544445678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 305 YMSNGSVASRLKAK------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 305 ~~~~g~L~~~l~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
|++ |+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 5998887532 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc------
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK------ 451 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 451 (549)
.... ......||+.|+|||.+.+. .++.++|||||||++|||+||+.||...........+...........
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 3222 22344689999999999764 689999999999999999999999975432211111111000000000
Q ss_pred --------------chhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 452 --------------KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 452 --------------~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.+.....+.... .....+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKE----PLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSS----CCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhHHHhhcccccc----cCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000111111 12357899999999999999999999875
No 56
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.6e-43 Score=359.03 Aligned_cols=252 Identities=22% Similarity=0.269 Sum_probs=202.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC--CcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 301 (549)
.++|++.+.||+|+||+||+|+.+ +++.||+|+++..... .....+..|..++.++ +||||+++++++...+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357889999999999999999976 5889999999754322 2223578899998877 89999999999999999999
Q ss_pred EeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 302 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~- 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP- 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC-
Confidence 999999999999998877899999999999999999999999 9999999999999999999999999999863322
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCcccccc-ccHHHHHHHHhhccchhhhcccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK-GAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+.+....... .
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------~ 278 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------Q 278 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC--------C
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc--------c
Confidence 22344567999999999999999999999999999999999999999743221111 11111111111111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKM 491 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 491 (549)
..++...+..+.+++.+||+.||++||++
T Consensus 279 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 --IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred --cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11222334678999999999999999996
No 57
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.6e-43 Score=347.68 Aligned_cols=262 Identities=21% Similarity=0.310 Sum_probs=200.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
++|++.+.||+|+||+||+|...+|+.||+|++..... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46888999999999999999998899999999975432 22235788999999999999999999999999999999999
Q ss_pred cCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 306 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 306 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
+++ +|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 985 88888864 46799999999999999999999999 999999999999999999999999999987653222 2
Q ss_pred eeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc--cc---hhh--h
Q 008893 385 TTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--KK---LEM--L 456 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~--~ 456 (549)
.....||+.|+|||.+.+. .++.++|||||||++|||+||+.||........ +.......... .. ... .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHHCCCChhhchhhhcccc
Confidence 2334689999999999764 589999999999999999999999975332111 11111111000 00 000 0
Q ss_pred cccccc-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 457 VDKDLK-------NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 457 ~d~~l~-------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.++... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 010000 0111123467889999999999999999999986
No 58
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=360.19 Aligned_cols=250 Identities=26% Similarity=0.341 Sum_probs=202.0
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCcee
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 300 (549)
..++|++.+.||+|+||+||+|..+ +|+.||||+++... .......+..|..++..+ +||||+++++++...+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3468999999999999999999976 58999999997532 122345678899999887 6999999999999999999
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
+||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 9999999999999998877899999999999999999999999 9999999999999999999999999999854322
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
.......+||+.|+|||++.+..++.++|||||||++|||+||+.||...... +....+....
T Consensus 178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~~--------- 240 (353)
T 3txo_A 178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-------DLFEAILNDE--------- 240 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC---------
T ss_pred -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCC---------
Confidence 22334567999999999999989999999999999999999999999743221 1111111110
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKM------SEVVR 496 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~ 496 (549)
..++......+.+++.+|++.||++||++ .|+++
T Consensus 241 --~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 241 --VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11222234678999999999999999998 66665
No 59
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4e-43 Score=362.05 Aligned_cols=264 Identities=20% Similarity=0.219 Sum_probs=211.4
Q ss_pred HHHHHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecC
Q 008893 220 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT 296 (549)
Q Consensus 220 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 296 (549)
.++....++|++.+.||+|+||+||+|... +++.||+|+++... .......+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344556789999999999999999999976 58999999986421 112223478999999999999999999999999
Q ss_pred CceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccc
Q 008893 297 TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 376 (549)
Q Consensus 297 ~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 376 (549)
...++||||+++|+|.++++.. .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 9999999999999999999765 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeeccccccCccCchhhccCC----CCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccc
Q 008893 377 LDHCDSHVTTAVRGTVGHIAPEYLSTGQ----SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 452 (549)
Q Consensus 377 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (549)
............+||+.|+|||++.+.. ++.++|||||||++|||+||+.||...... .....+.....
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~~~~~i~~~~~ 290 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------GTYSKIMNHKN 290 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTHHH
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-------hHHHHHHhccc
Confidence 7644333344567999999999998765 789999999999999999999999743221 11111111100
Q ss_pred hhhhccccccCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHhcC
Q 008893 453 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSL--RPKMSEVVRMLEGD 501 (549)
Q Consensus 453 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~L~~~ 501 (549)
.... + ... ..+..+.+++.+|++.+|++ ||+++||++|---.
T Consensus 291 ~~~~--p-~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~ 334 (410)
T 3v8s_A 291 SLTF--P-DDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFK 334 (410)
T ss_dssp HCCC--C-TTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred cccC--C-Ccc----cccHHHHHHHHHHccChhhhCCCCCHHHHhcCcccc
Confidence 0000 0 001 12367899999999999998 99999999865443
No 60
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.4e-43 Score=372.78 Aligned_cols=256 Identities=25% Similarity=0.404 Sum_probs=213.0
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEECC-CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
..++|++.+.||+|+||.||+|.+.. +..||||+++... .....|.+|+.++++++||||++++++|......++||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 44678888999999999999999875 8899999997643 24567999999999999999999999999999999999
Q ss_pred eccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 304 PYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 304 e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 99999999999974 34689999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
........++..|+|||.+....++.++|||||||++|||+| |+.||...... .+...+ . ..
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~~---~----------~~ 435 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELL---E----------KD 435 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHH---H----------TT
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHH---H----------cC
Confidence 222333446789999999999999999999999999999999 99998743321 111111 1 11
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCC
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 502 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 502 (549)
.....+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 436 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 436 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111222334477999999999999999999999999999753
No 61
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.9e-43 Score=351.34 Aligned_cols=256 Identities=27% Similarity=0.393 Sum_probs=210.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE------CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCc
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 298 (549)
.++|.+.+.||+|+||.||+|.. .+++.||||+++..........+.+|+.+++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45788899999999999999985 246799999998655434456799999999999 99999999999999999
Q ss_pred eeeEeeccCCCchhhhhccCC------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee
Q 008893 299 RLLVYPYMSNGSVASRLKAKP------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 360 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 360 (549)
.++||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 999999999999999987433 489999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccc
Q 008893 361 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 438 (549)
Q Consensus 361 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 438 (549)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-- 256 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-- 256 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH--
Confidence 99999999999999876544332 2234457889999999999999999999999999999999 9999864332111
Q ss_pred cHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 439 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+. .. .....+...+..+.+++.+|++.||++|||+.|++++|+.
T Consensus 257 -~~~~~~----~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 257 -FYKMIK----EG---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp -HHHHHH----HT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHHHhc----cC---------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 111111 00 1111112234678999999999999999999999999986
No 62
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.2e-44 Score=363.47 Aligned_cols=254 Identities=28% Similarity=0.386 Sum_probs=206.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCcee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 300 (549)
++|.+.+.||+|+||+||+|.+. +++.||||+++..........+.+|+.+++.++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888899999999999999953 467899999976544444557899999999999999999999999999999
Q ss_pred eEeeccCCCchhhhhccC-------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC---ceEEee
Q 008893 301 LVYPYMSNGSVASRLKAK-------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVVGD 370 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~D 370 (549)
+||||+++|+|.+++... ..+++..++.++.||+.||.|||+. +|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 999999999999999642 3589999999999999999999999 999999999999999544 599999
Q ss_pred cccccccCCCC-CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHh
Q 008893 371 FGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIH 448 (549)
Q Consensus 371 fg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 448 (549)
||+++...... ........||+.|+|||.+.+..++.++|||||||++|||+| |+.||..... ........
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-------~~~~~~i~ 300 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLEFVT 300 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHH
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHH
Confidence 99997543211 122234558899999999999999999999999999999998 9999864321 11111111
Q ss_pred hccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 449 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 449 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
... ....+...+..+.+++.+||+.||++||++.||+++|+.
T Consensus 301 ~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 301 SGG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cCC----------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 111 011122234678999999999999999999999999986
No 63
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-43 Score=349.92 Aligned_cols=246 Identities=27% Similarity=0.346 Sum_probs=206.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|++.+.||+|+||.||+|... +|+.||+|+++... .......+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888999999999999999976 69999999997532 1234556889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 9999999999998888899999999999999999999999 9999999999999999999999999999875432
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+... ..
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~i~~~---------~~-- 220 (318)
T 1fot_A 160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-------KTYEKILNA---------EL-- 220 (318)
T ss_dssp -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHC---------CC--
T ss_pred -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhC---------CC--
Confidence 23456999999999999999999999999999999999999999643211 111111111 00
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRM 497 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 497 (549)
.++.....++.+++.+|++.||++|| +++|++++
T Consensus 221 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 221 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 11222346789999999999999999 88888754
No 64
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.8e-43 Score=349.18 Aligned_cols=253 Identities=21% Similarity=0.290 Sum_probs=196.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCCc--HHHHHHHHHHHhhccCCCccceEEEEecCCce----
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGG--EIQFQTEVEMISLAVHRNLLRLIGFCMTTTER---- 299 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 299 (549)
++|++.+.||+|+||.||+|.. .+++.||||+++....... ...+.+|+.++..++||||+++++++......
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5788999999999999999997 4689999999976543222 34688999999999999999999998765443
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 99999999999999998777899999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc--eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhc
Q 008893 380 CDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 457 (549)
Q Consensus 380 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (549)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ..............
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~-- 239 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIPP-- 239 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCCH--
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCCc--
Confidence 3222 223456899999999999999999999999999999999999999643221 11111111111000
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 458 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 458 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
...... .+..+.+++.+||+.||++||+..+++.
T Consensus 240 -~~~~~~----~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 240 -SARHEG----LSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp -HHHSTT----CCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred -ccccCC----CCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 000111 2367899999999999999998887765
No 65
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.2e-43 Score=352.31 Aligned_cols=250 Identities=20% Similarity=0.319 Sum_probs=199.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC-------
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT------- 297 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 297 (549)
.++|++.+.||+|+||.||+|... +|+.||||+++..........+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356889999999999999999986 799999999986655555667999999999999999999999986543
Q ss_pred --------------------------------------------------ceeeEeeccCCCchhhhhccCC---CCCHH
Q 008893 298 --------------------------------------------------ERLLVYPYMSNGSVASRLKAKP---SLDWA 324 (549)
Q Consensus 298 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~---~l~~~ 324 (549)
..++||||+++++|.+++.... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 2789999999999999997643 35667
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC-----------ceeeccccccC
Q 008893 325 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-----------HVTTAVRGTVG 393 (549)
Q Consensus 325 ~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~gt~~ 393 (549)
.++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 7899999999999999999 999999999999999999999999999987764321 11233469999
Q ss_pred ccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHH
Q 008893 394 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEM 473 (549)
Q Consensus 394 y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l 473 (549)
|+|||.+.+..++.++||||||+++|||++|..|+... ......... ... ..........+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~---------~~~~~~~~~-~~~---------~~~~~~~~~~~ 302 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER---------VRIITDVRN-LKF---------PLLFTQKYPQE 302 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH---------HHHHHHHHT-TCC---------CHHHHHHCHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH---------HHHHHHhhc-cCC---------CcccccCChhH
Confidence 99999999999999999999999999999987665310 011111100 000 00112234667
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 008893 474 VQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 474 ~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.+++.+||+.||++|||+.|++++
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHccCCCCcCCCHHHHhhc
Confidence 899999999999999999999874
No 66
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-43 Score=354.81 Aligned_cols=246 Identities=20% Similarity=0.291 Sum_probs=204.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.+++.++||||+++++++......++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999997 468999999986431 1223457889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+ +|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162 (336)
T ss_dssp CCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--
T ss_pred ECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--
Confidence 999 689999988777899999999999999999999999 99999999999999999999999999998765332
Q ss_pred eeeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||.+.+..+ +.++|||||||++|+|++|+.||.......... .+... .
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----------------~i~~~--~ 224 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----------------KVNSC--V 224 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----------------CCCSS--C
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----------------HHHcC--C
Confidence 2334569999999999988776 789999999999999999999997543221110 00000 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
...+...+..+.+++.+|++.||.+|||++|+++
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1122223467899999999999999999999986
No 67
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.5e-43 Score=356.90 Aligned_cols=250 Identities=24% Similarity=0.297 Sum_probs=206.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++......++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888999999999999999976 58899999986432 2234557889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+.+|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~ 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--T 169 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--C
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC--C
Confidence 9999999999999888899999999999999999999999 9999999999999999999999999999876533 2
Q ss_pred eeeccccccCccCchhhcc---CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 384 VTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
......||+.|+|||++.. ..++.++|||||||++|||+||+.||........ ..........
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~----~~~~~~~~~~---------- 235 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS----KEIVHTFETT---------- 235 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH----HHHHHHHHHC----------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH----HHHHHHHhhc----------
Confidence 3345679999999999964 4589999999999999999999999974332211 1111111110
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPK-MSEVVR 496 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~ 496 (549)
...++...+..+.+++.+||+.||++||+ ++++.+
T Consensus 236 -~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 -VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 01122223467899999999999999998 676664
No 68
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.4e-43 Score=348.05 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=202.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE-----CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecC--Cce
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TER 299 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 299 (549)
++|++.+.||+|+||+||+|.+ .+++.||||++.... ......+.+|+.+++.++||||+++++++... ...
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 5788899999999999999984 258899999997543 23345789999999999999999999998653 458
Q ss_pred eeEeeccCCCchhhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 300 LLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 99999999999999997543 599999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc--eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc------
Q 008893 379 HCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE------ 450 (549)
Q Consensus 379 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 450 (549)
..... ......++..|+|||.+.+..++.++||||||+++|||+||..|+...... +.......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~ 237 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--------FMRMIGNDKQGQMI 237 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH--------HHHHHCTTCCTHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH--------HHhhhcCccccchh
Confidence 43221 222344778899999999999999999999999999999999887632110 00000000
Q ss_pred -cchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 451 -KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 451 -~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...............+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 238 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 00001111111112233345789999999999999999999999999976
No 69
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-42 Score=346.71 Aligned_cols=251 Identities=19% Similarity=0.241 Sum_probs=206.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|.+.+.||+|+||+||+|... +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 357889999999999999999976 58899999987432 234568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC--CCceEEeecccccccCCCC
Q 008893 305 YMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--YYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 305 ~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~ 381 (549)
|+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 99999999999764 4799999999999999999999999 9999999999999987 7899999999998775432
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ............ .+...
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~~---~~~~~ 226 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-------QIIENIMNAEYT---FDEEA 226 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCCC---CCHHH
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-------HHHHHHHcCCCC---CChhh
Confidence 334456999999999999888999999999999999999999999743211 111111111100 00000
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
... .+.++.+++.+|++.||++|||+.|++++
T Consensus 227 ~~~----~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 227 FKE----ISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hcc----CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111 23678999999999999999999999973
No 70
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.3e-43 Score=345.21 Aligned_cols=253 Identities=28% Similarity=0.442 Sum_probs=208.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
..++|++.+.||+|+||.||+|...++..||+|.++... .....+.+|+++++.++||||+++++++. .+..++|||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 346788899999999999999999888899999997543 23567999999999999999999999986 456899999
Q ss_pred ccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 305 YMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999999997543 699999999999999999999999 999999999999999999999999999987764433
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
.......++..|+|||.+.+..++.++||||||+++|||+| |+.||..... ...........
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~---------- 227 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------PEVIQNLERGY---------- 227 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTC----------
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-------HHHHHHHhccc----------
Confidence 33334457889999999998889999999999999999999 8989864321 11111111110
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+|++.||++|||+.++++.|+.
T Consensus 228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 011112234678999999999999999999999999986
No 71
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.9e-43 Score=341.49 Aligned_cols=252 Identities=28% Similarity=0.430 Sum_probs=209.3
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeecc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 306 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 306 (549)
++|+..+.||+|+||.||+|...+++.||+|++..... ....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 56888899999999999999998889999999976542 3467899999999999999999999999999999999999
Q ss_pred CCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCcee
Q 008893 307 SNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 385 (549)
Q Consensus 307 ~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 385 (549)
++++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++...........
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999754 5689999999999999999999999 999999999999999999999999999987643222222
Q ss_pred eccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccccCC
Q 008893 386 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 464 (549)
Q Consensus 386 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 464 (549)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||..... ........... ...
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~i~~~~----------~~~ 225 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTGF----------RLY 225 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTC----------CCC
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-------HHHHHHHhcCC----------cCC
Confidence 33457788999999999999999999999999999999 8999864321 11111111110 011
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 465 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 465 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.+...+..+.+++.+|++.||++||++.|++++|+.
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 112234678999999999999999999999999986
No 72
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.7e-42 Score=342.55 Aligned_cols=257 Identities=28% Similarity=0.410 Sum_probs=200.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|.+.+.||+|+||+||+|... ..+|+|+++..... .....+.+|+.+++.++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357889999999999999999864 46999998764432 22356899999999999999999999875 456899999
Q ss_pred ccCCCchhhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC-C
Q 008893 305 YMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-S 382 (549)
Q Consensus 305 ~~~~g~L~~~l~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 382 (549)
|+++++|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||+++...... .
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 999999999996 456799999999999999999999999 99999999999999999999999999998654322 2
Q ss_pred ceeeccccccCccCchhhc---cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 383 HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.......||+.|+|||.+. +..++.++||||||+++|||+||+.||....... .+...+. ... ..+
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---~~~~~~~---~~~-----~~~ 257 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QIIFMVG---RGY-----ASP 257 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHH---HTC-----CCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH---HHHHHHh---cCC-----CCc
Confidence 2233456999999999986 5678899999999999999999999997433211 1111111 110 011
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.+ .......+..+.+++.+||+.+|++||++.|++++|+.
T Consensus 258 ~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~ 297 (307)
T 3lb7_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp CS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred ch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence 11 11112234679999999999999999999999999886
No 73
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.8e-43 Score=367.62 Aligned_cols=255 Identities=27% Similarity=0.375 Sum_probs=205.0
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
...++|.+.+.||+|+||.||+|.++++..||||+++... .....|.+|+.+++.++||||+++++++.. +..++||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 3456788899999999999999999888889999998654 235679999999999999999999999876 6789999
Q ss_pred eccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 304 PYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 304 e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 99999999999974 34699999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
........++..|+|||.+....++.++||||||+++|||+| |+.||..... .+........
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i~~~---------- 397 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERG---------- 397 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTT----------
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcC----------
Confidence 223334457889999999999999999999999999999999 8999864321 1111111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
.....+...+..+.+++.+||+.||++|||++++++.|+..
T Consensus 398 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 398 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11112233447799999999999999999999999999873
No 74
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1e-42 Score=340.02 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=195.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC---CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI---GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|+..+.||+|+||.||+|.+. |+.||||+++..... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999986 889999998754322 22457899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC--------CCceEEeeccccc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--------YYEAVVGDFGLAK 375 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~--------~~~~kl~Dfg~~~ 375 (549)
||+++++|.+++... .+++..+..++.|++.||.|||+....+|+||||||+||+++. ++.+||+|||+++
T Consensus 86 e~~~~~~L~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp ECCTTEEHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred EcCCCCCHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 999999999998644 6999999999999999999999981112999999999999986 7789999999998
Q ss_pred ccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhh
Q 008893 376 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 455 (549)
Q Consensus 376 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (549)
...... .....||+.|+|||.+.+..++.++||||||+++|+|+||+.||...... ........
T Consensus 165 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~------ 228 (271)
T 3dtc_A 165 EWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-------AVAYGVAM------ 228 (271)
T ss_dssp --------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHT------
T ss_pred cccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHhhhc------
Confidence 654322 22346899999999999999999999999999999999999999743211 11111111
Q ss_pred hccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 456 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 456 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.......+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 229 ---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 229 ---NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp ---SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred ---CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 111111222334679999999999999999999999999975
No 75
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.3e-43 Score=363.28 Aligned_cols=255 Identities=19% Similarity=0.231 Sum_probs=206.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
..++|++.+.||+|+||+||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567899999999999999999975 6899999999765422 2234689999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec---CCCceEEeecccccccCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~~~~~~~ 379 (549)
|||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++ +++.+||+|||+++....
T Consensus 89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999999999998888899999999999999999999999 999999999999998 568899999999987654
Q ss_pred CCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
... ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||..... ......+.... . .. ..
T Consensus 166 ~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-------~~~~~~i~~~~-~-~~-~~ 234 (444)
T 3soa_A 166 EQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-------HRLYQQIKAGA-Y-DF-PS 234 (444)
T ss_dssp TCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTC-C-CC-CT
T ss_pred CCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHhCC-C-CC-Cc
Confidence 322 23345699999999999999999999999999999999999999964321 11111111110 0 00 00
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.. ....+..+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~----~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 PE----WDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TT----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cc----cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 11223678999999999999999999999874
No 76
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.3e-43 Score=345.47 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=196.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-------------------------cHHHHHHHHHHHhh
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-------------------------GEIQFQTEVEMISL 280 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-------------------------~~~~~~~e~~~l~~ 280 (549)
++|++.+.||+|+||.||+|... +++.||||++....... ....+.+|+.+++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57889999999999999999975 58899999996543111 12358899999999
Q ss_pred ccCCCccceEEEEec--CCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCee
Q 008893 281 AVHRNLLRLIGFCMT--TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANI 358 (549)
Q Consensus 281 l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Ni 358 (549)
++||||+++++++.. ....++||||+++++|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 999999999999986 5678999999999999987654 4699999999999999999999999 999999999999
Q ss_pred eecCCCceEEeecccccccCCCCCceeeccccccCccCchhhccCC---CCCcccchhHhHHHHHHHhCCcccccCcccc
Q 008893 359 LLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELISGLRALEFGKTAN 435 (549)
Q Consensus 359 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~il~elltg~~p~~~~~~~~ 435 (549)
|++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||.....
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-- 245 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI-- 245 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred EECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--
Confidence 999999999999999987654322 233456999999999997765 37789999999999999999999964321
Q ss_pred ccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 436 QKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
..+....... .. ....... .+..+.+++.+||+.||++|||+.|+++
T Consensus 246 -----~~~~~~~~~~-~~----~~~~~~~----~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 -----MCLHSKIKSQ-AL----EFPDQPD----IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -----HHHHHHHHHC-CC----CCCSSSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----HHHHHHHhcc-cC----CCCCccc----cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1111111111 00 0000111 2367899999999999999999999975
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.7e-42 Score=350.34 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=206.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|++.+.||+|+||.||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999976 5899999999765422 22346889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCC---CceEEeecccccccCCC
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY---YEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~ 380 (549)
||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++......
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999999998888899999999999999999999999 99999999999999864 45999999999876533
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ......+.... .. ....
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-------~~~~~~i~~~~-~~--~~~~ 252 (362)
T 2bdw_A 185 E--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYAQIKAGA-YD--YPSP 252 (362)
T ss_dssp C--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-CC--CCTT
T ss_pred c--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCC-CC--CCcc
Confidence 2 23345699999999999999999999999999999999999999964321 11111111110 00 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.. ...+..+.+++.+||+.||++||++.|++++
T Consensus 253 ~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 EW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01 1123678999999999999999999999864
No 78
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.9e-43 Score=353.62 Aligned_cols=254 Identities=23% Similarity=0.390 Sum_probs=203.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCE----EEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTV----VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
++|.+.+.||+|+||+||+|.+. +++. ||+|.+...........+.+|+.+++.++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46888899999999999999965 3443 88888865543344446778999999999999999999986 466899
Q ss_pred EeeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 302 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999764 5799999999999999999999999 9999999999999999999999999999987544
Q ss_pred CCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 381 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 381 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
... ......||..|+|||.+.+..++.++||||||+++|||+| |+.||...... .+...+. ...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~---~~~------- 234 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPDLLE---KGE------- 234 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHHHHH---TTC-------
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHHHHH---cCC-------
Confidence 332 2344568889999999999999999999999999999999 99999753321 1111111 110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
....+...+..+.+++.+||+.||++||++.|++++|+..
T Consensus 235 ---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~ 274 (325)
T 3kex_A 235 ---RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274 (325)
T ss_dssp ---BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred ---CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0111112234578999999999999999999999999874
No 79
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.2e-43 Score=351.27 Aligned_cols=266 Identities=25% Similarity=0.351 Sum_probs=208.4
Q ss_pred CCCCCeeeeeCCeEEEEEEEC-----CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecC--Cceee
Q 008893 229 FSSKNLVGKGGFGNVYKGYLQ-----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TERLL 301 (549)
Q Consensus 229 ~~~~~~iG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 301 (549)
|++.+.||+|+||+||++.+. +++.||||+++..........+.+|+++++.++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998753 58899999998665434455799999999999999999999999874 56799
Q ss_pred EeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 302 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
||||+++|+|.+++.... +++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 113 v~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 999999999999997654 99999999999999999999999 99999999999999999999999999998876543
Q ss_pred Cc--eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 382 SH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 382 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.. ......+|..|+|||.+.+..++.++||||||+++|||+||+.||........ ....+..............+.
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL--ELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh--hhhcccccchhHHHHHHHHhc
Confidence 32 22334578889999999999999999999999999999999999864221100 000000000000111112222
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
......+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 22222333445789999999999999999999999999986
No 80
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8.7e-43 Score=353.07 Aligned_cols=246 Identities=21% Similarity=0.252 Sum_probs=206.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|++.+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.+++.++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999976 68999999986432 2234557889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC---
Confidence 9999999999998777899999999999999999999999 9999999999999999999999999999876432
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... .
T Consensus 195 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-----------~ 255 (350)
T 1rdq_E 195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-------IQIYEKIVSGK-----------V 255 (350)
T ss_dssp -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-----------C
T ss_pred -cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-------HHHHHHHHcCC-----------C
Confidence 2345699999999999999999999999999999999999999974321 11111111110 0
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVRM 497 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 497 (549)
.++...+..+.+++.+||+.||++||+ ++|++++
T Consensus 256 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 112223467899999999999999998 7888754
No 81
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.3e-43 Score=347.83 Aligned_cols=254 Identities=26% Similarity=0.423 Sum_probs=213.3
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEECC-CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
..++|++.+.||+|+||.||+|.+.. +..||+|++.... .....+.+|+.+++.++||||+++++++......++||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 45678889999999999999999864 8899999997543 34567899999999999999999999999999999999
Q ss_pred eccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 304 PYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 304 e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 99999999999974 34599999999999999999999999 99999999999999999999999999998776554
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
........+|+.|+|||.+.+..++.++||||||+++|+|++ |..||....... ....+ . ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~----~~~~~---~----------~~ 228 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYELL---E----------KD 228 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HHHHH---H----------TT
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH---h----------cc
Confidence 444455567889999999999999999999999999999999 989986433211 11111 1 11
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.....+...+..+.+++.+|++.||++|||+.|+++.|+.
T Consensus 229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~ 268 (288)
T 3kfa_A 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268 (288)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence 1111222334679999999999999999999999999986
No 82
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.1e-43 Score=349.38 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=206.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE-----CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecC--Cce
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TER 299 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 299 (549)
..|++.+.||+|+||.||+|.+ .+++.||+|+++..........+.+|+.+++.++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3577889999999999999984 358899999998665555567899999999999999999999999876 668
Q ss_pred eeEeeccCCCchhhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 300 LLVYPYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
++||||+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 99999999999999995 455799999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCc--eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCcc--------ccccccHHHHHHHHh
Q 008893 379 HCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKT--------ANQKGAMLDWVKKIH 448 (549)
Q Consensus 379 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~--------~~~~~~~~~~~~~~~ 448 (549)
..... ......||..|+|||.+.+..++.++||||||+++|||+||+.|+..... .............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 255 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT-- 255 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH--
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH--
Confidence 54332 22345588889999999999999999999999999999999988653210 0000011111111
Q ss_pred hccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 449 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 449 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.........+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 256 --------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 256 --------LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp --------HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred --------HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 11111112233344779999999999999999999999999975
No 83
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.1e-43 Score=351.33 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=208.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC--------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecC
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 296 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 296 (549)
.++|.+.+.||+|+||.||+|... ++..||||+++..........+.+|+.+++.+ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467889999999999999999863 46789999998655434455789999999999 899999999999999
Q ss_pred CceeeEeeccCCCchhhhhccCC----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee
Q 008893 297 TERLLVYPYMSNGSVASRLKAKP----------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 360 (549)
Q Consensus 297 ~~~~lv~e~~~~g~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 360 (549)
+..++||||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 99999999999999999997543 389999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccc
Q 008893 361 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 438 (549)
Q Consensus 361 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 438 (549)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-----
Confidence 99999999999999876543322 2233457889999999998889999999999999999999 9999864321
Q ss_pred cHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 439 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
........... ....+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 266 --~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 315 (334)
T 2pvf_A 266 --EELFKLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315 (334)
T ss_dssp --HHHHHHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --HHHHHHHhcCC----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111111111 011122234678999999999999999999999999986
No 84
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.4e-42 Score=363.96 Aligned_cols=248 Identities=27% Similarity=0.389 Sum_probs=204.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC-ceeeEe
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT-ERLLVY 303 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 303 (549)
..++|++.+.||+|+||.||+|.+. |+.||||+++... ....|.+|+.++++++||||+++++++.... ..++||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 3467888999999999999999986 7899999997643 3457999999999999999999999987765 789999
Q ss_pred eccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 304 PYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
||+++|+|.+++.... .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 9999999999997533 479999999999999999999999 9999999999999999999999999999854322
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ... .....
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~----~~~---~i~~~---------- 402 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----VVP---RVEKG---------- 402 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT----HHH---HHHTT----------
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHH---HHHcC----------
Confidence 122357889999999999999999999999999999999 999997433211 111 11111
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.....+..++..+.+++.+||+.||++|||+.++++.|+.
T Consensus 403 ~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 403 YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111223344789999999999999999999999999876
No 85
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.9e-43 Score=355.51 Aligned_cols=251 Identities=25% Similarity=0.329 Sum_probs=206.1
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCce
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTER 299 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 299 (549)
...++|.+.+.||+|+||.||+|..+ +|+.||+|+++... .......+..|..++..+ +||||+++++++...+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45678999999999999999999986 58999999997532 123345678889888876 899999999999999999
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
++||||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999998777899999999999999999999999 999999999999999999999999999986432
Q ss_pred CCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.. ......+||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.... .
T Consensus 171 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-------~~~~~i~~~~-------~ 235 (345)
T 1xjd_A 171 GD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-------ELFHSIRMDN-------P 235 (345)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC-------C
T ss_pred CC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHhCC-------C
Confidence 22 2234567999999999999999999999999999999999999999743211 1111111110 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS-EVVR 496 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~ 496 (549)
.++...+..+.+++.+||+.||++||++. |+++
T Consensus 236 ----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 236 ----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 11222346789999999999999999997 6654
No 86
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7.7e-43 Score=342.99 Aligned_cols=254 Identities=22% Similarity=0.377 Sum_probs=203.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECC----CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
.++|.+.+.||+|+||+||+|...+ +..||+|.++..........+.+|+.+++.++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999998643 346999999866444445679999999999999999999999765 45789
Q ss_pred EeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 302 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999974 44699999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+ .....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~----~~~~~---~~~~~------- 232 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIGVL---EKGDR------- 232 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG----HHHHH---HHTCC-------
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH----HHHHH---hcCCC-------
Confidence 3333344557889999999999999999999999999999998 999996433211 11111 11110
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...+...+..+.+++.+||+.||++||++.|++++|+.
T Consensus 233 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 270 (281)
T 3cc6_A 233 ---LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 270 (281)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence 01112233678999999999999999999999999986
No 87
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.8e-42 Score=348.81 Aligned_cols=251 Identities=23% Similarity=0.273 Sum_probs=201.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC--cHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 302 (549)
++|++.+.||+|+||.||+|..+ +++.||+|+++...... ....+..|..++..+ +||||+++++++......++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46888999999999999999976 58899999997654222 234578899999887 899999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~- 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC-
Confidence 99999999999998777899999999999999999999999 99999999999999999999999999998643222
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCcccccc-ccHHHHHHHHhhccchhhhccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK-GAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+....... .
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--------~- 235 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------Q- 235 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--------C-
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--------C-
Confidence 2334557999999999999999999999999999999999999999743221110 00111111111111 0
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKM 491 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 491 (549)
..++...+..+.+++.+||+.||++||++
T Consensus 236 -~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 236 -IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11222334678999999999999999996
No 88
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=7.9e-43 Score=355.30 Aligned_cols=253 Identities=23% Similarity=0.246 Sum_probs=196.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|.+.+.||+|+||+||++... +++.||||++..... ....+.+|+.+++.++||||+++++++......++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 357889999999999999999976 689999999976442 23568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc--eEEeecccccccCCCCC
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--AVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~ 382 (549)
|+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 999999999998777899999999999999999999999 9999999999999987765 999999999743322
Q ss_pred ceeeccccccCccCchhhccCCCCCc-ccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
.......||+.|+|||.+.+..++.+ +|||||||++|+|++|+.||........ ............ .
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~~~~~~~~~~---------~ 239 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD---YRKTIQRILSVK---------Y 239 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC---HHHHHHHHHTTC---------C
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH---HHHHHHHHhcCC---------C
Confidence 12234469999999999988887665 8999999999999999999975433222 112122111110 0
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
........+..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 240 SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000001123678899999999999999999999875
No 89
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.5e-42 Score=348.28 Aligned_cols=251 Identities=22% Similarity=0.273 Sum_probs=184.2
Q ss_pred CCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-CCCccceEEEEecCCceeeEeeccCCC
Q 008893 232 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLVYPYMSNG 309 (549)
Q Consensus 232 ~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 309 (549)
.+.||+|+||+||+|... +|+.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999976 5899999999643 3456889999999997 999999999999999999999999999
Q ss_pred chhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC---ceEEeecccccccCCCCCceee
Q 008893 310 SVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVVGDFGLAKLLDHCDSHVTT 386 (549)
Q Consensus 310 ~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~ 386 (549)
+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++....... ...
T Consensus 92 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~ 167 (325)
T 3kn6_A 92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLK 167 (325)
T ss_dssp BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-ccc
Confidence 9999999888899999999999999999999999 999999999999997665 899999999987654322 233
Q ss_pred ccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCCC
Q 008893 387 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD 466 (549)
Q Consensus 387 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 466 (549)
...||+.|+|||.+.+..++.++||||||+++|||++|+.||........................ .......
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~ 240 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF-------SFEGEAW 240 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC-------CCCSHHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC-------CCCcccc
Confidence 456899999999999999999999999999999999999999754433222222222222221110 0000000
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 467 RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 467 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...+..+.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1234678999999999999999999999753
No 90
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.3e-42 Score=345.81 Aligned_cols=257 Identities=18% Similarity=0.181 Sum_probs=206.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|.+.+.||+|+||+||+|.. .+|+.||||++...... ..+..|+.+++.+ +||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA---PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS---CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch---HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 35788999999999999999996 46899999998754322 2578999999999 9999999999999999999999
Q ss_pred eccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc-----eEEeeccccccc
Q 008893 304 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLL 377 (549)
Q Consensus 304 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfg~~~~~ 377 (549)
||+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 999 9999999975 46799999999999999999999999 9999999999999998887 999999999876
Q ss_pred CCCCCc------eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc
Q 008893 378 DHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 451 (549)
Q Consensus 378 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 451 (549)
...... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........ ...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~----~~~~~~i~~~~ 236 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL----KERYQKIGDTK 236 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH----HHHHHHHHHHH
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH----HHHHHHHHhhh
Confidence 543321 12345699999999999999999999999999999999999999975432221 11111111100
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 452 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 452 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
. .. ....+... .+ .+.+++..|++.||.+||+++++.+.|++
T Consensus 237 ~-~~-~~~~~~~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 237 R-AT-PIEVLCEN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp H-HS-CHHHHTTT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred c-cC-CHHHHhcc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 0 00 00000011 12 79999999999999999999999998875
No 91
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=365.20 Aligned_cols=264 Identities=22% Similarity=0.236 Sum_probs=209.4
Q ss_pred cCHHHHHHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC--CCcHHHHHHHHHHHhhccCCCccceEEEE
Q 008893 217 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFC 293 (549)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 293 (549)
+.+++.....++|++.+.||+|+||+||+|..+ +|+.||||+++.... ......+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 344555566789999999999999999999986 699999999964221 11223478899999999999999999999
Q ss_pred ecCCceeeEeeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecc
Q 008893 294 MTTTERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 372 (549)
Q Consensus 294 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 372 (549)
.+.+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 9999999999999999999999753 4799999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeeccccccCccCchhhc-------cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHH
Q 008893 373 LAKLLDHCDSHVTTAVRGTVGHIAPEYLS-------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 445 (549)
Q Consensus 373 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 445 (549)
+++.............+||+.|+|||++. ...++.++|||||||++|||+||+.||........ ..
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-------~~ 280 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-------YG 280 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH-------HH
Confidence 99877654433344567999999999987 35689999999999999999999999975332111 11
Q ss_pred HHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHH
Q 008893 446 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLR---PKMSEVVRM 497 (549)
Q Consensus 446 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~evl~~ 497 (549)
.+..... ...-+.. ....+.++.+++.+||. +|++| |+++|+++|
T Consensus 281 ~i~~~~~--~~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 281 KIVHYKE--HLSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHTHHH--HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHhccc--CcCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1111000 0000111 11223678999999999 99998 589998764
No 92
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.4e-43 Score=349.88 Aligned_cols=264 Identities=26% Similarity=0.378 Sum_probs=212.8
Q ss_pred CHHHHHHHhcCCCCCCeeeeeCCeEEEEEEE------CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceE
Q 008893 218 HFKELQSATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLI 290 (549)
Q Consensus 218 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~ 290 (549)
...++....++|.+.+.||+|+||+||+|.+ .+++.||||+++..........+.+|+.++..+ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444455667899999999999999999984 246899999998655444455789999999999 799999999
Q ss_pred EEEecCC-ceeeEeeccCCCchhhhhccCCC----------------CCHHHHHHHHHHHHHHHHHhhhcCCCceEeccc
Q 008893 291 GFCMTTT-ERLLVYPYMSNGSVASRLKAKPS----------------LDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 353 (549)
Q Consensus 291 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 353 (549)
+++...+ ..++||||+++|+|.+++..... +++..+..++.|++.||.|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 9988755 48999999999999999975443 89999999999999999999999 9999999
Q ss_pred CcCeeeecCCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccC
Q 008893 354 KAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFG 431 (549)
Q Consensus 354 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~ 431 (549)
||+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999876543332 2334568899999999999999999999999999999998 99998643
Q ss_pred ccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 432 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.... ... ........ ...+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 255 ~~~~---~~~---~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 307 (316)
T 2xir_A 255 KIDE---EFC---RRLKEGTR----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307 (316)
T ss_dssp CCSH---HHH---HHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred chhH---HHH---HHhccCcc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 3211 111 11111100 11112223678999999999999999999999999986
No 93
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.1e-42 Score=349.44 Aligned_cols=250 Identities=24% Similarity=0.283 Sum_probs=196.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE----CCCCEEEEEEcccCCC---CCcHHHHHHHHHHHhhccCCCccceEEEEecCCc
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 298 (549)
.++|++.+.||+|+||.||++.. .+|+.||+|+++.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788999999999999999997 4689999999976432 1223457889999999999999999999999999
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
.++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999999998777899999999999999999999999 99999999999999999999999999997543
Q ss_pred CCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+....
T Consensus 173 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~i~~~~------- 237 (327)
T 3a62_A 173 HDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-------KTIDKILKCK------- 237 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHTC-------
T ss_pred cCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCC-------
Confidence 222 2234456999999999999999999999999999999999999999743211 1111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRM 497 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 497 (549)
...+......+.+++.+||+.||++|| ++.|++++
T Consensus 238 ----~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 ----LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ----CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 011222346789999999999999999 67777764
No 94
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.9e-42 Score=339.86 Aligned_cols=252 Identities=29% Similarity=0.501 Sum_probs=202.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcH------HHHHHHHHHHhhccCCCccceEEEEecCCc
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGE------IQFQTEVEMISLAVHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~------~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 298 (549)
.++|++.+.||+|+||+||+|... +++.||+|++......... ..+.+|+.+++.++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 357888999999999999999975 6899999999755433222 56899999999999999999999986554
Q ss_pred eeeEeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEecccCcCeeeecCCCc-----eEEee
Q 008893 299 RLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYE-----AVVGD 370 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~-----~kl~D 370 (549)
++||||+++|+|.+.+.. ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 799999999999888754 44799999999999999999999998 8 999999999999988776 99999
Q ss_pred cccccccCCCCCceeeccccccCccCchhhc--cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHh
Q 008893 371 FGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS--TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 448 (549)
Q Consensus 371 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 448 (549)
||+++.... ......||+.|+|||.+. ...++.++||||||+++|||++|+.||....... ..+.....
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~~~~~~ 243 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIR 243 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH-----HHHHHHHH
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH-----HHHHHHHh
Confidence 999975432 234456999999999984 4557899999999999999999999997432211 11111111
Q ss_pred hccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 449 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 449 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
. .......+...+..+.+++.+||+.||++|||++|+++.|++
T Consensus 244 ~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 E---------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp H---------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred c---------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1 111112223334779999999999999999999999999975
No 95
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8e-43 Score=353.06 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=199.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccC--CCccceEEEEecCCceeeE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVH--RNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 302 (549)
.++|++.+.||+|+||.||++...+++.||||++....... ....+.+|+.++..++| |||+++++++......++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35688899999999999999999889999999997554222 23568999999999976 9999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|| +.+++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 99 56789999999888899999999999999999999999 999999999999997 57899999999987654332
Q ss_pred c-eeeccccccCccCchhhcc-----------CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc
Q 008893 383 H-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 450 (549)
Q Consensus 383 ~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 450 (549)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... . ...
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~-~~~------ 230 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----I-SKL------ 230 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----H-HHH------
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-----H-HHH------
Confidence 2 2334569999999999865 67889999999999999999999999632210 1 111
Q ss_pred cchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 451 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 451 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..+.++.....++......+.+++.+||+.||++|||+.|++++
T Consensus 231 ---~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 231 ---HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ---HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11122222222222234678999999999999999999999875
No 96
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-41 Score=337.50 Aligned_cols=258 Identities=17% Similarity=0.199 Sum_probs=207.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ..+.+|+..+..+ +|+|++++++++......++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc---HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 35788999999999999999996 46899999998754322 2477899999998 7999999999999999999999
Q ss_pred eccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc-----eEEeeccccccc
Q 008893 304 PYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLL 377 (549)
Q Consensus 304 e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfg~~~~~ 377 (549)
||+ +++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++. +||+|||+++..
T Consensus 86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 999 99999999753 4699999999999999999999999 9999999999999987766 999999999876
Q ss_pred CCCCCc------eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc
Q 008893 378 DHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 451 (549)
Q Consensus 378 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 451 (549)
...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...........+ ..+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~ 240 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY-ERIGEKKQST 240 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHH-HHHHHHHHHS
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHH-HHHHhhccCc
Confidence 543321 223456999999999999999999999999999999999999999754322221111 1111111011
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 452 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 452 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.... +... .+..+.+++.+||+.||++||++++|++.|+.
T Consensus 241 ~~~~-----~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~ 280 (298)
T 1csn_A 241 PLRE-----LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 280 (298)
T ss_dssp CHHH-----HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred cHHH-----HHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence 1111 1111 23678999999999999999999999999886
No 97
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=352.45 Aligned_cols=251 Identities=22% Similarity=0.274 Sum_probs=192.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|++.+.||+|+||.||+|... +++.||||+++... ....+.+|+.++..++||||+++++++......++|||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 457889999999999999999986 58899999997543 23467889999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC---CCceEEeecccccccCCCC
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~ 381 (549)
|+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 999999999998888899999999999999999999999 9999999999999975 899999999999866432
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||....... .......... . ..
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~i~~~~-~------~~ 270 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ------FMFRRILNCE-Y------YF 270 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH------HHHHHHHTTC-C------CC
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH------HHHHHHHhCC-C------cc
Confidence 12234569999999999999999999999999999999999999996432211 0111111110 0 00
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
........+..+.+++.+||+.||++|||+.|++++
T Consensus 271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011112234678999999999999999999999874
No 98
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=346.81 Aligned_cols=244 Identities=25% Similarity=0.283 Sum_probs=192.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|+..+.||+|+||+||+|... +|+.||||++...... .....+..|+..+..+ +||||+++++++.+....++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57889999999999999999986 6999999998654322 2223455556555555 8999999999999999999999
Q ss_pred eccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 304 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 304 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
||+ +++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 6688888764 45699999999999999999999999 99999999999999999999999999998764322
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... | ...... . ..+...
T Consensus 212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~-~~~~~~-~----~~~~~~ 274 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------W-QQLRQG-Y----LPPEFT 274 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------H-HHHTTT-C----CCHHHH
T ss_pred -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------H-HHHhcc-C----CCcccc
Confidence 2334569999999999875 799999999999999999999777643110 1 111110 0 011111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
. ..+..+.+++.+||+.||++|||++|+++
T Consensus 275 ~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 A----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1 12367899999999999999999999986
No 99
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5e-43 Score=353.01 Aligned_cols=259 Identities=25% Similarity=0.366 Sum_probs=210.2
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEECC------CCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEec
Q 008893 223 QSATSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMT 295 (549)
Q Consensus 223 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 295 (549)
+...++|.+.+.||+|+||.||+|.... +..||+|.++..........+.+|+.+++.+ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3445789999999999999999999642 2489999998655444456799999999999 89999999999999
Q ss_pred CCceeeEeeccCCCchhhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec
Q 008893 296 TTERLLVYPYMSNGSVASRLKA--------------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD 361 (549)
Q Consensus 296 ~~~~~lv~e~~~~g~L~~~l~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 361 (549)
.+..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 9999999999999999999863 34589999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCcccccccc
Q 008893 362 EYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGA 439 (549)
Q Consensus 362 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 439 (549)
.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||....... .
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~ 275 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS---K 275 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---H
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---H
Confidence 9999999999999866433322 2234457889999999999999999999999999999999 888986432211 1
Q ss_pred HHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 440 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+.. . .....+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 276 ~~~~~~~----~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 323 (333)
T 2i1m_A 276 FYKLVKD----G---------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323 (333)
T ss_dssp HHHHHHH----T---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhc----C---------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence 1111111 0 0011112224678999999999999999999999999986
No 100
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=355.92 Aligned_cols=266 Identities=18% Similarity=0.223 Sum_probs=212.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC--ceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--ERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 303 (549)
++|.+.+.||+|+||+||+|... +|+.||||+++..........+.+|+++++.++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56888999999999999999976 489999999986554455667889999999999999999999998765 679999
Q ss_pred eccCCCchhhhhccCC---CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee----cCCCceEEeecccccc
Q 008893 304 PYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVVGDFGLAKL 376 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~~~~ 376 (549)
||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997533 399999999999999999999999 99999999999999 7888899999999987
Q ss_pred cCCCCCceeeccccccCccCchhhcc--------CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHh
Q 008893 377 LDHCDSHVTTAVRGTVGHIAPEYLST--------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 448 (549)
Q Consensus 377 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 448 (549)
..... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.......... ..+....
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~---~~~~~~~ 240 (396)
T 4eut_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK---EVMYKII 240 (396)
T ss_dssp CCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH---HHHHHHH
T ss_pred ccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH---HHHHHHh
Confidence 65322 2234569999999999865 457789999999999999999999997543322221 1122221
Q ss_pred hccc---hhhhc-----------cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 449 QEKK---LEMLV-----------DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 449 ~~~~---~~~~~-----------d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.... ...+. +..............+.+++.+||+.||++||+++|+++.++.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 1110 00000 0011123457778889999999999999999999999988876
No 101
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.9e-42 Score=339.06 Aligned_cols=246 Identities=20% Similarity=0.309 Sum_probs=183.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC--CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|++.+.||+|+||.||+|... +|+.||+|++..... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999964 689999999975432 233557899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+ ++++.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred hhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc--
Confidence 999 678888888777899999999999999999999999 99999999999999999999999999998665322
Q ss_pred eeeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||..... ...........
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~----------- 228 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGV----------- 228 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-----------
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-----------
Confidence 2234469999999999988765 7899999999999999999999964321 11111111110
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
...+...+..+.+++.+|++.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 229 YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0112223467899999999999999999999975
No 102
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-42 Score=338.44 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=203.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecC--CceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|.++ ++.||||+++..... .....+.+|+.+++.++||||+++++++... ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57888999999999999999986 889999999765422 2234689999999999999999999999877 7789999
Q ss_pred eccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 304 PYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999998654 589999999999999999999998 7 99999999999999999999999998764332
Q ss_pred CCCceeeccccccCccCchhhccCCCCC---cccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhh
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSE---KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 456 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (549)
....||+.|+|||.+.+..++. ++||||||+++|||+||+.||...... .........
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~------ 226 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-------EIGMKVALE------ 226 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-------HHHHHHHHS------
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-------HHHHHHHhc------
Confidence 2235899999999998765544 799999999999999999999643211 111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 457 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 457 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
......+...+..+.+++.+||+.||++|||++|+++.|+.
T Consensus 227 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 227 ---GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp ---CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11111222334679999999999999999999999999986
No 103
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-42 Score=353.66 Aligned_cols=252 Identities=22% Similarity=0.282 Sum_probs=206.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|+.++..++||||+++++++.+....++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 357899999999999999999976 689999999975432 234468899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec--CCCceEEeecccccccCCCC
Q 008893 305 YMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD--EYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 305 ~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++......
T Consensus 129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999999999754 3799999999999999999999999 999999999999997 45789999999998765432
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ............ ..+...
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~i~~~~~---~~~~~~ 273 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LETLQNVKRCDW---EFDEDA 273 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHCCC---CCCSST
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCC---CCCccc
Confidence 23344699999999999999999999999999999999999999974321 111111111110 011111
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
....+..+.+++.+||+.||++|||+.|++++
T Consensus 274 ----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 ----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ----cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11234678999999999999999999999975
No 104
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.1e-43 Score=351.24 Aligned_cols=244 Identities=21% Similarity=0.287 Sum_probs=204.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-------cHHHHHHHHHHHhhccCCCccceEEEEecC
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-------GEIQFQTEVEMISLAVHRNLLRLIGFCMTT 296 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 296 (549)
..++|++.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3467999999999999999999965 68999999997653211 222477899999999999999999999999
Q ss_pred CceeeEeeccCCC-chhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeeccccc
Q 008893 297 TERLLVYPYMSNG-SVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 375 (549)
Q Consensus 297 ~~~~lv~e~~~~g-~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 375 (549)
+..++||||+.+| +|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999999999777 9999999888899999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchh
Q 008893 376 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 454 (549)
Q Consensus 376 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (549)
....... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||......
T Consensus 179 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------------- 236 (335)
T 3dls_A 179 YLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------------- 236 (335)
T ss_dssp ECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------------------
T ss_pred ECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------------------
Confidence 7654332 234569999999999988876 78999999999999999999999631110
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 455 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 455 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...... .+...+..+.+++.+||+.||++|||+.|++++
T Consensus 237 --~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 --VEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --TTTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --HhhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 011123678999999999999999999999985
No 105
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-41 Score=344.66 Aligned_cols=252 Identities=21% Similarity=0.258 Sum_probs=202.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccC----CCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDG----NAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
++|++.+.||+|+||+||+|... +|+.||||++... ........+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46889999999999999999975 6899999998632 112235679999999999999999999999999999999
Q ss_pred EeeccCCCchhhhhcc----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc---eEEeecccc
Q 008893 302 VYPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLA 374 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg~~ 374 (549)
||||+++++|.+.+.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999887752 34589999999999999999999999 9999999999999986554 999999999
Q ss_pred cccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchh
Q 008893 375 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 454 (549)
Q Consensus 375 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (549)
+...... .......||+.|+|||++.+..++.++|||||||++|+|+||+.||..... ...........
T Consensus 181 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~i~~~~~-- 249 (351)
T 3c0i_A 181 IQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--------RLFEGIIKGKY-- 249 (351)
T ss_dssp EECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--------HHHHHHHHTCC--
T ss_pred eEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--------HHHHHHHcCCC--
Confidence 8765432 223345699999999999999999999999999999999999999974211 11111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 455 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 455 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...+..... .+..+.+++.+||+.||++|||+.|++++
T Consensus 250 -~~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 -KMNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -CCCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -CCCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000000111 23678999999999999999999999863
No 106
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.4e-42 Score=348.29 Aligned_cols=256 Identities=25% Similarity=0.375 Sum_probs=192.2
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEECC-C---CEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecCCce
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQD-G---TVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 299 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-g---~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 299 (549)
..++|++.+.||+|+||.||+|.... + ..||||+++.... ......+.+|+.+++.++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999999653 3 2799999976532 23345799999999999999999999999877655
Q ss_pred ------eeEeeccCCCchhhhhccC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceE
Q 008893 300 ------LLVYPYMSNGSVASRLKAK------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV 367 (549)
Q Consensus 300 ------~lv~e~~~~g~L~~~l~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 367 (549)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 9999999999999998532 2599999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHH
Q 008893 368 VGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 445 (549)
Q Consensus 368 l~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 445 (549)
|+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... +..
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~--- 250 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----IYN--- 250 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHH---
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH----HHH---
Confidence 9999999876443322 2223457789999999999999999999999999999999 899987433211 111
Q ss_pred HHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 446 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 446 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...... ....+...+..+.+++.+||+.||++|||+.++++.|++
T Consensus 251 ~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 295 (323)
T 3qup_A 251 YLIGGN----------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295 (323)
T ss_dssp HHHTTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHhcCC----------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111 011122234679999999999999999999999999986
No 107
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=344.45 Aligned_cols=267 Identities=20% Similarity=0.235 Sum_probs=201.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
++|++.+.||+|+||+||+|... +|+.||+|++....... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999986 58999999986554322 23458899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 158 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-Y 158 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-c
Confidence 999999999998878899999999999999999999999 999999999999999999999999999987653322 2
Q ss_pred eeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHH--------HHHhhccchhh
Q 008893 385 TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV--------KKIHQEKKLEM 455 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 455 (549)
.....||+.|+|||.+.+ ..++.++||||||+++|+|+||+.||...........+.... ...........
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 234468999999999976 568999999999999999999999997543322111111000 00000000000
Q ss_pred hccccccCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 456 LVDKDLKNNYD-----RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 456 ~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...+......+ ...+..+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000000 1223568899999999999999999999864
No 108
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=347.44 Aligned_cols=254 Identities=23% Similarity=0.388 Sum_probs=201.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCC----EEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGT----VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
++|++.+.||+|+||.||+|.+. +++ .||+|.+...........+.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57889999999999999999964 344 368888876655566778999999999999999999999998754 789
Q ss_pred EeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 302 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
++||+.+|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 9999999999999875 45799999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 381 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 381 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... +...+ .
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~~~---~---------- 233 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSIL---E---------- 233 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHHH---H----------
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH----HHHHH---H----------
Confidence 222 2233447889999999999999999999999999999999 999997432211 11111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
.......+...+..+.+++.+||+.||++||++.|+++.|+..
T Consensus 234 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 234 KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111112222346789999999999999999999999999873
No 109
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.6e-42 Score=351.21 Aligned_cols=251 Identities=23% Similarity=0.276 Sum_probs=205.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEECC-CCEEEEEEcccCC--CCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCcee
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 300 (549)
..++|++.+.||+|+||.||+|.... |+.||+|+++... .......+..|..++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 34689999999999999999999864 8899999997532 123345688899999887 7999999999999999999
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
+||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999999998777899999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 175 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~~--------- 237 (353)
T 2i0e_A 175 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEHN--------- 237 (353)
T ss_dssp -TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC---------
T ss_pred -CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhCC---------
Confidence 2233456799999999999999999999999999999999999999974321 11111111110
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVRM 497 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 497 (549)
..++...+..+.+++.+||+.||++||+ ++|++++
T Consensus 238 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1122233467899999999999999996 4666643
No 110
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.7e-43 Score=365.06 Aligned_cols=251 Identities=23% Similarity=0.240 Sum_probs=198.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
.++|++.+.||+|+||.||+|... +|+.||||+++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 367889999999999999999975 68999999997532 222334678899999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|||+++|+|.+++.....+++..+..++.||+.||.|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 9999999999999877789999999999999999999998 7 99999999999999999999999999998643322
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ...........
T Consensus 304 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~---------- 365 (446)
T 4ejn_A 304 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEE---------- 365 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC----------
T ss_pred -cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHHhCC----------
Confidence 223446799999999999999999999999999999999999999964321 11111111110
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRML 498 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L 498 (549)
..++...+..+.+++.+||+.||++|| +++|++++-
T Consensus 366 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 366 -IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred -CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 011222346789999999999999999 999998643
No 111
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.7e-43 Score=351.42 Aligned_cols=264 Identities=23% Similarity=0.384 Sum_probs=213.3
Q ss_pred CHHHHHHHhcCCCCCCeeeeeCCeEEEEEEEC------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEE
Q 008893 218 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIG 291 (549)
Q Consensus 218 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 291 (549)
..++++...++|++.+.||+|+||.||+|... +++.||+|.+...........+.+|+.+++.++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33445556778999999999999999999864 367899999986554444556899999999999999999999
Q ss_pred EEecCCceeeEeeccCCCchhhhhccC----------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec
Q 008893 292 FCMTTTERLLVYPYMSNGSVASRLKAK----------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD 361 (549)
Q Consensus 292 ~~~~~~~~~lv~e~~~~g~L~~~l~~~----------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 361 (549)
++...+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 999999999999999999999998631 4579999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCcccccccc
Q 008893 362 EYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGA 439 (549)
Q Consensus 362 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 439 (549)
.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------ 246 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------ 246 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------
Confidence 9999999999999865432221 1123346889999999999999999999999999999999 8888864321
Q ss_pred HHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 440 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
........... . ...+...+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 247 -~~~~~~~~~~~-~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 247 -EQVLRFVMEGG-L---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp -HHHHHHHHTTC-C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred -HHHHHHHHcCC-c---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 11111111111 0 011222346789999999999999999999999999974
No 112
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-42 Score=340.07 Aligned_cols=253 Identities=25% Similarity=0.364 Sum_probs=206.0
Q ss_pred cCCCCCC-eeeeeCCeEEEEEEEC---CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 227 SNFSSKN-LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 227 ~~~~~~~-~iG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
++|.+.+ .||+|+||.||+|... ++..||||+++..........+.+|+.+++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 8999999999999854 57889999998754444456799999999999999999999999 45678999
Q ss_pred eeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 303 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999864 45699999999999999999999999 99999999999999999999999999998775433
Q ss_pred Cce--eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 382 SHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 382 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~i~~~~------- 230 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQGK------- 230 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-------HHHHHHHTTC-------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHhcCC-------
Confidence 322 223346889999999998889999999999999999999 99999643221 1111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+||+.||++||++.|++++|+.
T Consensus 231 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 269 (287)
T 1u59_A 231 ---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269 (287)
T ss_dssp ---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred ---cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111222334779999999999999999999999999987
No 113
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.2e-42 Score=337.37 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=207.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|++.+.||+|+||.||+|... +++.||||++...........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 357889999999999999999976 6899999999765544555679999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC-c
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-H 383 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~ 383 (549)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999999999998877899999999999999999999999 999999999999999999999999999986543221 1
Q ss_pred eeeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||........ ....|. ..... ..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~----~~~~~---~~---- 229 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWK----EKKTY---LN---- 229 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHHHH----TTCTT---ST----
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHhh----hcccc---cC----
Confidence 2234568999999999987765 7789999999999999999999975332211 111111 10000 00
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.....+..+.+++.+|++.||++|||+.|+++
T Consensus 230 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 01112367889999999999999999999986
No 114
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.3e-42 Score=343.14 Aligned_cols=254 Identities=26% Similarity=0.349 Sum_probs=204.4
Q ss_pred hcCCCCCC-eeeeeCCeEEEEEEEC---CCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCcee
Q 008893 226 TSNFSSKN-LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 226 ~~~~~~~~-~iG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 300 (549)
.++|.+.+ .||+|+||+||+|.+. +++.||||+++...... ....+.+|+.+++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 9999999999999643 46889999997654322 245799999999999999999999999 567789
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
+||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 9999999999999998888899999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCcee--eccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhc
Q 008893 381 DSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 457 (549)
Q Consensus 381 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (549)
..... ....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ..........
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~------ 237 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKGE------ 237 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTC------
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHcCC------
Confidence 33222 22346788999999998889999999999999999999 99998643211 1111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 458 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 458 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+||+.||++||++.++++.|++
T Consensus 238 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 238 ----RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111222334679999999999999999999999999986
No 115
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2e-41 Score=339.64 Aligned_cols=253 Identities=22% Similarity=0.262 Sum_probs=208.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-----cHHHHHHHHHHHhhccCCCccceEEEEecCCce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 299 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 299 (549)
.++|++.+.||+|+||.||+|... +|+.||+|+++...... ....+.+|+.+++.++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356889999999999999999976 58999999997543222 356799999999999999999999999999999
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC----ceEEeeccccc
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAK 375 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfg~~~ 375 (549)
++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999999998888899999999999999999999999 999999999999999887 79999999998
Q ss_pred ccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhh
Q 008893 376 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 455 (549)
Q Consensus 376 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (549)
...... ......||+.|+|||.+.+..++.++||||||+++|+|+||+.||...... .......... .
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~i~~~~---~ 235 (321)
T 2a2a_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANITSVS---Y 235 (321)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTTC---C
T ss_pred ecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhcc---c
Confidence 765432 223446999999999999999999999999999999999999999643211 1111111100 0
Q ss_pred hccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 456 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 456 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..++..... .+..+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 236 DFDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ccChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001111111 23568999999999999999999999874
No 116
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2e-42 Score=355.87 Aligned_cols=251 Identities=21% Similarity=0.291 Sum_probs=199.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhcc--CCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAV--HRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 303 (549)
.+|.+.+.||+|+||.||+|...+++.||||++...... .....+.+|+.++..++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458899999999999999999888999999999754422 22356899999999996 599999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
| +.+++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.+......
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 56889999998878899999999999999999999999 999999999999996 589999999999876543222
Q ss_pred -eeeccccccCccCchhhcc-----------CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc
Q 008893 384 -VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 451 (549)
Q Consensus 384 -~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 451 (549)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~------ 278 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLH------ 278 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHH------
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHHH------
Confidence 2334569999999999865 3688999999999999999999999964221 111111
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 452 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 452 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.+.+......++......+.+++.+||+.||++|||+.|++++
T Consensus 279 ---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 ---AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1112211112222224678999999999999999999999864
No 117
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-41 Score=335.54 Aligned_cols=249 Identities=20% Similarity=0.268 Sum_probs=198.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
++|.+.+.||+|+||+||++... ++..||+|++...........+.+|+++++.++||||+++++++......++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46888999999999999999975 58999999998766555667899999999999999999999999999999999999
Q ss_pred cCCCchhhhhc----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee---cCCCceEEeecccccccC
Q 008893 306 MSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 306 ~~~g~L~~~l~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~ 378 (549)
+++|+|.+.+. ....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 99999999885 346799999999999999999999999 99999999999999 456889999999998665
Q ss_pred CCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
... ......||+.|+|||.+. ..++.++||||||+++|||++|+.||...... .............
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~---- 244 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-------EVQQKATYKEPNY---- 244 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCC----
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-------HHHhhhccCCccc----
Confidence 322 233456999999999985 56899999999999999999999999743211 1111111100000
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
...... .+..+.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 245 AVECRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC--CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccccCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000011 2367889999999999999999999985
No 118
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-42 Score=353.41 Aligned_cols=257 Identities=23% Similarity=0.283 Sum_probs=206.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE----CCCCEEEEEEcccCCC---CCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 298 (549)
++|++.+.||+|+||.||+|.. .+|+.||||+++.... ......+.+|+.++..+ .||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5788999999999999999997 3689999999864321 12234567899999999 69999999999999999
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
.++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999999998777899999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccCccCchhhccC--CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhh
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTG--QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 456 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (549)
...........||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ...........
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~------ 281 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS---QAEISRRILKS------ 281 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC---HHHHHHHHHHC------
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch---HHHHHHHHhcc------
Confidence 4333334456799999999999863 478999999999999999999999975433222 11222111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHhc
Q 008893 457 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLEG 500 (549)
Q Consensus 457 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~~ 500 (549)
. ..++...+..+.+++.+||+.||++|| +++|++++.--
T Consensus 282 -~----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 282 -E----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp -C----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred -C----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 0 112223346788999999999999999 99999876544
No 119
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.4e-42 Score=353.13 Aligned_cols=266 Identities=19% Similarity=0.235 Sum_probs=203.5
Q ss_pred hcCCCCCCeeeee--CCeEEEEEEEC-CCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 226 TSNFSSKNLVGKG--GFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 226 ~~~~~~~~~iG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
.++|++.+.||+| +||+||+|... +|+.||||+++...... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4578899999999 99999999986 69999999997654322 23468889999999999999999999999999999
Q ss_pred EeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 302 VYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999754 6799999999999999999999999 999999999999999999999999999865422
Q ss_pred CCC------ceeeccccccCccCchhhcc--CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh--
Q 008893 380 CDS------HVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ-- 449 (549)
Q Consensus 380 ~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 449 (549)
... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||......... .........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~ 257 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML---LEKLNGTVPCL 257 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH---HHC--------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH---HHHhcCCCCcc
Confidence 111 11122368999999999987 57899999999999999999999999753322211 000000000
Q ss_pred -------cc-------------chhhhcc---------ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 450 -------EK-------------KLEMLVD---------KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 450 -------~~-------------~~~~~~d---------~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.. ....... ......+.......+.+++.+||+.||++|||+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 0000000 000001222334678999999999999999999999864
No 120
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3e-42 Score=361.84 Aligned_cols=248 Identities=23% Similarity=0.359 Sum_probs=207.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|... +|+.||||++.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999976 69999999996432 1233457899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 170 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence 9999999999998888899999999999999999999999 99999999999999999999999999998765432
Q ss_pred eeeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
.....+||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...... .....+.... .
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-------~~~~~i~~~~---------~- 233 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-------TLFKKICDGI---------F- 233 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-------HHHHHHHTTC---------C-
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-------HHHHHHhcCC---------c-
Confidence 2334569999999999988775 68999999999999999999999743221 1111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..+......+.+++.+||+.||++|||+.|++++
T Consensus 234 -~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 -YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0111223678999999999999999999999963
No 121
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=8.5e-43 Score=350.47 Aligned_cols=269 Identities=24% Similarity=0.323 Sum_probs=209.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE-----CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEe--cCCce
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTER 299 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 299 (549)
++|++.+.||+|+||.||+|.+ .+++.||||++.... ......+.+|+++++.++||||+++++++. +....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5688899999999999999984 358899999997543 233456899999999999999999999987 44568
Q ss_pred eeEeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 300 LLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 899999999999999975 44699999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCc--eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhh
Q 008893 379 HCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 456 (549)
Q Consensus 379 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (549)
..... ......||..|+|||.+.+..++.++||||||+++|+|+||+.||.......... ..+.............
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM--MGCERDVPALSRLLEL 256 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH--CC----CCHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh--cccccccccHHHHHHH
Confidence 44332 2233458888999999999999999999999999999999999986422110000 0000000000011111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 457 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 457 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
.........+...+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 112222223334457899999999999999999999999999974
No 122
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.2e-42 Score=351.52 Aligned_cols=264 Identities=17% Similarity=0.170 Sum_probs=202.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECC------CCEEEEEEcccCCCCCc----------HHHHHHHHHHHhhccCCCccce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGG----------EIQFQTEVEMISLAVHRNLLRL 289 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~----------~~~~~~e~~~l~~l~h~niv~l 289 (549)
.++|.+.+.||+|+||.||+|.+.. ++.||||++........ ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999999764 47899999875431100 0123345556667789999999
Q ss_pred EEEEecC----CceeeEeeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec--C
Q 008893 290 IGFCMTT----TERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD--E 362 (549)
Q Consensus 290 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~ 362 (549)
++++... ...++||||+ +++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 9998764 4579999999 99999999754 6799999999999999999999999 999999999999999 8
Q ss_pred CCceEEeecccccccCCCCCc------eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccc
Q 008893 363 YYEAVVGDFGLAKLLDHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ 436 (549)
Q Consensus 363 ~~~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~ 436 (549)
++.+||+|||+++.+...... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||.......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~- 268 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP- 268 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-
Confidence 899999999999876432211 1133459999999999999999999999999999999999999997432211
Q ss_pred cccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 437 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+.... ....+..+.++.+... ..+..+.+++..||+.+|++||++.++++.|+.
T Consensus 269 --~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 269 --KYVRDSKIR-YRENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp --HHHHHHHHH-HHHCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred --HHHHHHHHH-hhhhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 111111111 1122334444433211 123678999999999999999999999998875
No 123
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.8e-42 Score=366.04 Aligned_cols=253 Identities=25% Similarity=0.302 Sum_probs=207.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
.++|...+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++..++||||+++++++...+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467889999999999999999976 69999999996432 223455688999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 303 YPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
|||+++|+|.+++.... .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987543 499999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+.. .
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~---~---------- 404 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---V---------- 404 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH---C----------
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc---c----------
Confidence 2 233457999999999999989999999999999999999999999754332221111111110 0
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRM 497 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 497 (549)
...++...+..+.+++.+||+.||++|| +++|+++|
T Consensus 405 -~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 -PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0112222346789999999999999999 67787754
No 124
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-42 Score=346.68 Aligned_cols=254 Identities=28% Similarity=0.431 Sum_probs=200.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECC-----CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQD-----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 301 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 301 (549)
++|...+.||+|+||.||+|.... +..||||+++..........+.+|+.+++.++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456678999999999999998653 236999999865443344578999999999999999999999999999999
Q ss_pred EeeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 302 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999753 5799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc--eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhc
Q 008893 381 DSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 457 (549)
Q Consensus 381 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (549)
... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..... ............
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~~~----- 268 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDGFR----- 268 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCC-----
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHCCCc-----
Confidence 221 1222346788999999999999999999999999999999 9999864221 111111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 458 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 458 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...+...+..+.+++.+||+.||++||++.|++++|+.
T Consensus 269 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 306 (333)
T 1mqb_A 269 -----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306 (333)
T ss_dssp -----CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred -----CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11122234678999999999999999999999999986
No 125
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.5e-42 Score=337.29 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=205.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|++.+.||+|+||.||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++......++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467899999999999999999976 5899999999754422 22346889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc---eEEeecccccccCCC
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLAKLLDHC 380 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~ 380 (549)
||+++++|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999999988777899999999999999999999999 9999999999999986655 999999999876533
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
. ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... .. .
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~-~~-~---- 226 (284)
T 3kk8_A 162 E--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------RLYAQIKAGA-YD-Y---- 226 (284)
T ss_dssp C--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTC-CC-C----
T ss_pred c--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-------HHHHHHHhcc-cc-C----
Confidence 2 223456999999999999999999999999999999999999999643211 1111111110 00 0
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
........+..+.+++.+|++.||++|||+.|+++
T Consensus 227 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 227 -PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00001122367899999999999999999999986
No 126
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-41 Score=338.75 Aligned_cols=258 Identities=18% Similarity=0.183 Sum_probs=200.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCc--HHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGG--EIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
.++|.+.+.||+|+||.||+|... +++.||+|++........ ...+.+|+.++..++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999976 688999999975532222 35688999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999999998777899999999999999999999999 999999999999999999999999999987654333
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
.......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......... ...
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~----~~~--- 254 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQAI----PRP--- 254 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSCC----CCG---
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccCC----CCc---
Confidence 3334456999999999999999999999999999999999999999742211 1111111100 000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHhcC
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRP-KMSEVVRMLEGD 501 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~ 501 (549)
.......+..+.+++.+||+.||++|| +++++++.|+..
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 011122235788999999999999999 999999999874
No 127
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.9e-42 Score=338.53 Aligned_cols=248 Identities=28% Similarity=0.407 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
.++|++.+.||+|+||+||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467889999999999999999976 57899999986432 112345688999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|||+++++|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-- 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc--
Confidence 99999999999998777899999999999999999999998 9999999999999999999999999998654322
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... .
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~-------~---- 223 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-------ETYKRISRV-------E---- 223 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHT-------C----
T ss_pred -cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-------HHHHHHHhC-------C----
Confidence 223456899999999999999999999999999999999999999743211 111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 224 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 224 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11122233678899999999999999999999974
No 128
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=343.25 Aligned_cols=263 Identities=26% Similarity=0.300 Sum_probs=199.0
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCC----CCcHHHHHHHHHHHhhcc---CCCccceEEEEecC
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNA----IGGEIQFQTEVEMISLAV---HRNLLRLIGFCMTT 296 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 296 (549)
..++|++.+.||+|+||+||+|.. .+|+.||||+++.... ......+.+|+.+++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999996 4689999999864321 122345777888877665 99999999999875
Q ss_pred C-----ceeeEeeccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEe
Q 008893 297 T-----ERLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVG 369 (549)
Q Consensus 297 ~-----~~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 369 (549)
. ..++||||+. ++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999997 59999987654 399999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh
Q 008893 370 DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 449 (549)
Q Consensus 370 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 449 (549)
|||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ +.........
T Consensus 163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~ 237 (308)
T 3g33_A 163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFDLIGL 237 (308)
T ss_dssp SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH---HHHHHHHHCC
T ss_pred eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCC
Confidence 999998765322 23445699999999999999999999999999999999999999975332211 1111111100
Q ss_pred ---ccchhh--hccccccC--C-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 450 ---EKKLEM--LVDKDLKN--N-----YDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 450 ---~~~~~~--~~d~~l~~--~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
...... ........ . ........+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 000000 00000000 0 00112367899999999999999999999986
No 129
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=371.99 Aligned_cols=246 Identities=26% Similarity=0.371 Sum_probs=199.8
Q ss_pred eeeeeCCeEEEEEEEC---CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeeccCCCc
Q 008893 234 LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 310 (549)
Q Consensus 234 ~iG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 310 (549)
.||+|+||.||+|.+. ++..||||+++..........+.+|+++++.++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 4668999999876555566789999999999999999999999976 56899999999999
Q ss_pred hhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCcee--ec
Q 008893 311 VASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT--TA 387 (549)
Q Consensus 311 L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~--~~ 387 (549)
|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++.......... ..
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999864 44699999999999999999999999 999999999999999999999999999987654332211 22
Q ss_pred cccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccccCCCC
Q 008893 388 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD 466 (549)
Q Consensus 388 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 466 (549)
..+++.|+|||++.+..++.++|||||||++|||+| |+.||...... .+. ..+.... ....+
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~---~~i~~~~----------~~~~p 561 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVM---AFIEQGK----------RMECP 561 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH----HHH---HHHHTTC----------CCCCC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHH---HHHHcCC----------CCCCC
Confidence 335689999999999999999999999999999998 99999753321 111 1111111 11122
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 467 RIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 467 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
..++..+.+++..||+.||++||++.++++.|+.
T Consensus 562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 562 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 3344789999999999999999999999999986
No 130
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-42 Score=338.25 Aligned_cols=254 Identities=28% Similarity=0.382 Sum_probs=202.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEECC-C---CEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCce-eeE
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQD-G---TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER-LLV 302 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~~-g---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv 302 (549)
.|...+.||+|+||+||+|.+.+ + ..||+|.+...........+.+|+.+++.++||||+++++++...+.. +++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 35566899999999999998542 2 379999997655444456789999999999999999999999876655 999
Q ss_pred eeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 303 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|||+.+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999975 45789999999999999999999999 99999999999999999999999999998654321
Q ss_pred ---CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 382 ---SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 382 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
........+|+.|+|||.+.+..++.++||||||+++|+|+||..|+....... .....+. ...
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~---~~~~~~~---~~~------- 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF---DLTHFLA---QGR------- 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG---GHHHHHH---TTC-------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH---HHHHHhh---cCC-------
Confidence 112233458899999999999999999999999999999999766654322211 1111111 110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+|++.||++|||++++++.|+.
T Consensus 246 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 246 ---RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 011122233678999999999999999999999999986
No 131
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.8e-41 Score=349.83 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=192.4
Q ss_pred cCCCCC-CeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHh-hccCCCccceEEEEec----CCce
Q 008893 227 SNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLLRLIGFCMT----TTER 299 (549)
Q Consensus 227 ~~~~~~-~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~----~~~~ 299 (549)
++|.+. +.||+|+||+||+|... +|+.||||++... ..+.+|+.++. ..+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 355555 68999999999999976 5899999998632 35678888874 4589999999998865 5578
Q ss_pred eeEeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC---CCceEEeecccc
Q 008893 300 LLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 374 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~~ 374 (549)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999999999764 3599999999999999999999999 9999999999999997 789999999999
Q ss_pred cccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchh
Q 008893 375 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 454 (549)
Q Consensus 375 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (549)
+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...............+.. ...
T Consensus 212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~----~~~- 284 (400)
T 1nxk_A 212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQY- 284 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH----TCC-
T ss_pred cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc----Ccc-
Confidence 8654322 233456899999999999999999999999999999999999999754433222112211111 000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 455 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 455 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..........+.++.+++.+||+.||++|||+.|++++
T Consensus 285 -----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 285 -----EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -----CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000011223678999999999999999999999975
No 132
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=347.20 Aligned_cols=266 Identities=18% Similarity=0.184 Sum_probs=200.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC----CCCEEEEEEcccCCCCC----------cHHHHHHHHHHHhhccCCCccceEEE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIG----------GEIQFQTEVEMISLAVHRNLLRLIGF 292 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~l~~~ 292 (549)
++|.+.+.||+|+||.||+|... ++..||+|++....... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999975 57889999987543210 11236677888889999999999999
Q ss_pred Eec----CCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC--ce
Q 008893 293 CMT----TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY--EA 366 (549)
Q Consensus 293 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~--~~ 366 (549)
+.. ....++||||+ +++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcE
Confidence 987 67889999999 999999998777899999999999999999999999 999999999999999877 99
Q ss_pred EEeecccccccCCCCC------ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccH
Q 008893 367 VVGDFGLAKLLDHCDS------HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 440 (549)
Q Consensus 367 kl~Dfg~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~ 440 (549)
||+|||+++.+..... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||........ ..
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~ 270 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--AV 270 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--HH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--HH
Confidence 9999999987643211 111344699999999999999999999999999999999999999964221111 11
Q ss_pred HHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCCC
Q 008893 441 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 503 (549)
Q Consensus 441 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 503 (549)
........ . ........... ....+..+.+++.+||+.||++||+++++++.|+....
T Consensus 271 ~~~~~~~~-~-~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QTAKTNLL-D-ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHH-H-TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHhhc-c-cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111111 0 01111000000 00123679999999999999999999999999998543
No 133
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.8e-42 Score=370.50 Aligned_cols=256 Identities=27% Similarity=0.373 Sum_probs=210.2
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 223 QSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 223 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
+...++|.+.+.||+|+||.||+|.+.++..||||+++... .....|.+|+.+++.++||||+++++++.+ +..++|
T Consensus 263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred ecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 34456788899999999999999999888889999998654 235679999999999999999999999876 678999
Q ss_pred eeccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 303 YPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 999999999999974 34699999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.........++..|+|||.+....++.++|||||||++|||+| |+.||..... .+....+....
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-------~~~~~~i~~~~-------- 481 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERGY-------- 481 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-------HHHHHHHHTTC--------
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCC--------
Confidence 1112223446789999999999999999999999999999999 8999864321 11111111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
....+...+..+.+++.+||+.||++|||+++|++.|+..
T Consensus 482 --~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 482 --RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111223346789999999999999999999999999873
No 134
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.9e-42 Score=350.81 Aligned_cols=253 Identities=25% Similarity=0.273 Sum_probs=198.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC--CcHHHHHHHHHH-HhhccCCCccceEEEEecCCceeeE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEM-ISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
++|++.+.||+|+||.||+|+.+ +++.||+|+++..... .....+..|..+ ++.++||||+++++++...+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 46888999999999999999976 5889999999764322 223346666666 5678999999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~- 193 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN- 193 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC-
Confidence 99999999999998777899999999999999999999999 99999999999999999999999999998643222
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... .+
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~---------~~- 256 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-------EMYDNILNK---------PL- 256 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-------HHHHHHHHS---------CC-
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHhc---------cc-
Confidence 2334567999999999999999999999999999999999999999643211 111111111 00
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
.++...+..+.+++.+||+.||++||++.+.++.+...
T Consensus 257 -~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 257 -QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp -CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred -CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 11122236789999999999999999987655555543
No 135
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=9.3e-41 Score=330.46 Aligned_cols=258 Identities=20% Similarity=0.257 Sum_probs=206.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEE-ecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC-MTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 303 (549)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+|+.++..++|++++..++++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46789999999999999999997 4789999999875442 23588999999999998877776666 5566789999
Q ss_pred eccCCCchhhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee---cCCCceEEeecccccccCC
Q 008893 304 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 304 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~~ 379 (549)
||+ +++|.+++. ....+++..+..++.|++.||.|||++ +|+||||||+|||+ ++++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 899999997 455799999999999999999999999 99999999999999 4889999999999987654
Q ss_pred CCCc------eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccch
Q 008893 380 CDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 453 (549)
Q Consensus 380 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (549)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...........+......... ...
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~ 239 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPI 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SCH
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-Cch
Confidence 4321 123456999999999999999999999999999999999999999864433322222221111110 000
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 454 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 454 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
. .+...+ +..+.+++.+||+.||++|||+.++++.|+.
T Consensus 240 ~-----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 277 (296)
T 3uzp_A 240 E-----VLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp H-----HHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred H-----HHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence 0 011112 3678999999999999999999999999886
No 136
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.9e-43 Score=348.69 Aligned_cols=256 Identities=24% Similarity=0.330 Sum_probs=187.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhh--ccCCCccceEEEEecCC----cee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTTT----ERL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~ 300 (549)
++|.+.+.||+|+||.||+|... |+.||||++... ....+..|.+++.. ++||||+++++++.... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 57899999999999999999875 889999998643 24567778888776 79999999999998776 789
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCceEecccCcCeeeecCCCceEEeecc
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEYYEAVVGDFG 372 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 372 (549)
+||||+++|+|.+++... .+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||+|||
T Consensus 78 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EEEeccCCCCHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecC
Confidence 999999999999999754 5889999999999999999999 77 99999999999999999999999999
Q ss_pred cccccCCCCCce---eeccccccCccCchhhccC------CCCCcccchhHhHHHHHHHhC----------CcccccCcc
Q 008893 373 LAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISG----------LRALEFGKT 433 (549)
Q Consensus 373 ~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~il~elltg----------~~p~~~~~~ 433 (549)
+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| ..||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 997665433321 2234699999999999776 344689999999999999999 455543211
Q ss_pred ccccccHHHHHHHHhhccchhhhccccccCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCC
Q 008893 434 ANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD-----RIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 502 (549)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 502 (549)
..... .. ....+.........+ ...+..+.+++.+||+.||++|||+.|+++.|+...
T Consensus 234 ~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 234 SDPSV--EE---------MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp -CCCC--C----------CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred CCccH--HH---------HHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 11100 00 011111112222222 255678999999999999999999999999999743
No 137
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.5e-41 Score=330.66 Aligned_cols=259 Identities=20% Similarity=0.255 Sum_probs=203.1
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEE-ecCCceeeE
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC-MTTTERLLV 302 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv 302 (549)
..++|++.+.||+|+||.||+|.. .+++.||||++...... ..+..|+.++..++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 457899999999999999999997 46899999987654322 2478899999999988877777766 566778999
Q ss_pred eeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee---cCCCceEEeecccccccC
Q 008893 303 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~ 378 (549)
|||+ +++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 9999999873 55799999999999999999999999 99999999999999 789999999999998765
Q ss_pred CCCCc------eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccc
Q 008893 379 HCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 452 (549)
Q Consensus 379 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (549)
..... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...........+......... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~ 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TP 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SC
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc-ch
Confidence 44321 123456999999999999999999999999999999999999999864433332222221111110 00
Q ss_pred hhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 453 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 453 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
... ....+ +..+.+++.+|++.||++|||+.++++.|++
T Consensus 239 ~~~-----~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (296)
T 4hgt_A 239 IEV-----LCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp HHH-----HTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred hhh-----hhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 000 11112 3678999999999999999999999999886
No 138
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.4e-42 Score=345.28 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=202.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCE--EEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTV--VAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~--vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 302 (549)
++|++.+.||+|+||.||+|... ++.. ||+|.++..........+.+|+.++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999965 4654 4999987654444455789999999999 899999999999999999999
Q ss_pred eeccCCCchhhhhccCC----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCce
Q 008893 303 YPYMSNGSVASRLKAKP----------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEA 366 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 366 (549)
|||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997543 699999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHH
Q 008893 367 VVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 445 (549)
Q Consensus 367 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 445 (549)
||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||..... .....
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AELYE 252 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHH
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-------HHHHH
Confidence 99999999743321 11223347889999999998889999999999999999998 9999964321 11111
Q ss_pred HHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 446 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 446 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
..... .....+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 253 ~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 297 (327)
T 1fvr_A 253 KLPQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297 (327)
T ss_dssp HGGGT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HhhcC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111 0111122234678999999999999999999999999986
No 139
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.4e-42 Score=346.91 Aligned_cols=252 Identities=20% Similarity=0.289 Sum_probs=202.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|++.+.||+|+||.||++..+ +|+.||||++..... ...+|++++.++ +||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467899999999999999999976 588999999976542 234678888777 7999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCC----CceEEeecccccccCC
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY----YEAVVGDFGLAKLLDH 379 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~~~~~~~ 379 (549)
||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||+.++ +.+||+|||+++....
T Consensus 96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 9999999999998888899999999999999999999999 99999999999998533 3599999999987654
Q ss_pred CCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .......+.... .
T Consensus 173 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~~~~i~~~~-~------ 240 (342)
T 2qr7_A 173 ENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT----PEEILARIGSGK-F------ 240 (342)
T ss_dssp TTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC----HHHHHHHHHHCC-C------
T ss_pred CCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC----HHHHHHHHccCC-c------
Confidence 332 2334568999999999988888999999999999999999999997432211 112222221111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.+...+....+..+.+++.+||+.||++||++.|++++
T Consensus 241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01111122234678999999999999999999999863
No 140
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-42 Score=351.65 Aligned_cols=253 Identities=30% Similarity=0.450 Sum_probs=193.5
Q ss_pred CCCCCCeeeeeCCeEEEEEEEC--C--CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEec-CCceeeE
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQ--D--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT-TTERLLV 302 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~--~--g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv 302 (549)
.|...+.||+|+||+||+|.+. + +..||||.++..........+.+|+.+++.++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566789999999999999864 2 246899999765544555679999999999999999999999765 4578999
Q ss_pred eeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 303 YPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999754 4689999999999999999999999 99999999999999999999999999998664322
Q ss_pred Cc---eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhc
Q 008893 382 SH---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 457 (549)
Q Consensus 382 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (549)
.. ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||....... ....+ .....
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~----~~~~~---~~~~~----- 314 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYL---LQGRR----- 314 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC----HHHHH---HTTCC-----
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH----HHHHH---HcCCC-----
Confidence 11 1233457889999999999999999999999999999999 566665332211 11111 11110
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 458 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 458 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...+...+..+.+++.+||+.||++||++.|++++|+.
T Consensus 315 -----~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~ 352 (373)
T 3c1x_A 315 -----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352 (373)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01112234678999999999999999999999999986
No 141
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-41 Score=339.27 Aligned_cols=266 Identities=26% Similarity=0.356 Sum_probs=201.2
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhh--ccCCCccceEEEEecC---
Q 008893 222 LQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTT--- 296 (549)
Q Consensus 222 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~--- 296 (549)
-....++|++.+.||+|+||.||+|... |+.||||++.... ...+..|.+++.. ++||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 3445678999999999999999999986 8999999986432 3344555555554 4899999999999877
Q ss_pred -CceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCceEecccCcCeeeecCCCceEEee
Q 008893 297 -TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-----DPKIIHRDVKAANILLDEYYEAVVGD 370 (549)
Q Consensus 297 -~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~D 370 (549)
...++||||+++|+|.++++.. .+++..+..++.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred CCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 6789999999999999999765 5999999999999999999999752 34899999999999999999999999
Q ss_pred cccccccCCCCCce---eeccccccCccCchhhccCCCCCc------ccchhHhHHHHHHHhC----------CcccccC
Q 008893 371 FGLAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTGQSSEK------TDVFGFGILLLELISG----------LRALEFG 431 (549)
Q Consensus 371 fg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~G~il~elltg----------~~p~~~~ 431 (549)
||+++......... .....||+.|+|||.+.+...+.+ +|||||||++|||+|| +.||...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 99997665433221 124469999999999988776665 9999999999999999 4454432
Q ss_pred ccccccccHHHHHHHHhhccchhhhccccccC-CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 432 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN-NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
..... ..... ......... .+.... ......+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 266 ~~~~~--~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 266 VPSDP--SYEDM-REIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp SCSSC--CHHHH-HHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cCCCC--chhhh-HHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 21111 11111 111111110 111110 0122567889999999999999999999999999986
No 142
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.9e-42 Score=346.89 Aligned_cols=263 Identities=19% Similarity=0.252 Sum_probs=195.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|.+.+.||+|+||+||+|... +++.||||+++...... ....+.+|+.+++.++||||+++++++......++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 457889999999999999999965 68999999997554322 2345789999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee-----cCCCceEEeecccccccC
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL-----DEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill-----~~~~~~kl~Dfg~~~~~~ 378 (549)
||++ |+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 113 e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp ECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred ecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9998 49999998888899999999999999999999999 99999999999999 455669999999998765
Q ss_pred CCCCceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc--chhh
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK--KLEM 455 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 455 (549)
.... ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||........ +........... ....
T Consensus 189 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 189 IPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ---LFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp ------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCTTTSTT
T ss_pred Cccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH---HHHHHHHhCCCchhhhhh
Confidence 3322 22344589999999999875 489999999999999999999999975332111 111111110000 0000
Q ss_pred hc-cccc-------cCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 456 LV-DKDL-------KNN-----YDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 456 ~~-d~~l-------~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.. .+.. ... ........+.+++.+||+.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00 0000 000 00112367889999999999999999999986
No 143
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=6.3e-42 Score=336.69 Aligned_cols=251 Identities=21% Similarity=0.266 Sum_probs=203.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-----CcHHHHHHHHHHHhhccCCCccceEEEEecCCcee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-----GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 300 (549)
++|++.+.||+|+||.||+|... +|+.||+|+++..... .....+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999986 6899999998754322 13567999999999999999999999999999999
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC----ceEEeecccccc
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAKL 376 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfg~~~~ 376 (549)
+||||+++++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+||+++.++ .+||+|||++..
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999998777899999999999999999999999 999999999999998877 899999999987
Q ss_pred cCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhh
Q 008893 377 LDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 456 (549)
Q Consensus 377 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (549)
..... ......||+.|+|||.+.+..++.++||||||+++|+|+||+.||...... ........... .
T Consensus 162 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~---~ 229 (283)
T 3bhy_A 162 IEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-------ETLTNISAVNY---D 229 (283)
T ss_dssp CC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTTCC---C
T ss_pred ccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-------HHHHHhHhccc---C
Confidence 65322 223445899999999999999999999999999999999999999743211 11111111000 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 457 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 457 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
........ .+..+.+++.+|++.||++||++.|+++
T Consensus 230 ~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FDEEYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCHHHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Ccchhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 00001111 2366899999999999999999999986
No 144
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.5e-42 Score=337.43 Aligned_cols=259 Identities=29% Similarity=0.438 Sum_probs=194.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
..++|++.+.||+|+||+||+|... ..||+|+++..... .....+.+|+.+++.++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3467899999999999999999864 35999999765432 2235689999999999999999999965 456789999
Q ss_pred eccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC-
Q 008893 304 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD- 381 (549)
Q Consensus 304 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 381 (549)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999963 45799999999999999999999999 99999999999999999999999999998654322
Q ss_pred CceeeccccccCccCchhhc---cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 382 SHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||....... .+...+. . ... .
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~---~-~~~----~ 244 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD---QIIEMVG---R-GSL----S 244 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH---HHHHHHH---H-TSC----C
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH---HHHHHhc---c-ccc----C
Confidence 22233456999999999986 5678889999999999999999999997432211 1111111 1 111 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
+.+ .......+..+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 245 ~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l 286 (289)
T 3og7_A 245 PDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286 (289)
T ss_dssp CCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred cch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 100 111222346799999999999999999999999999873
No 145
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.3e-41 Score=329.10 Aligned_cols=250 Identities=19% Similarity=0.233 Sum_probs=204.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|.+.+.||+|+||.||+|... ++..||+|++..... .....+.+|+.+++.++||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 456889999999999999999976 477999999876442 345679999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee---cCCCceEEeecccccccCCCC
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 87 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 999999999998777899999999999999999999999 99999999999999 788999999999998765332
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
......||+.|+|||.+.+. ++.++||||||+++|||+||+.||...... ........... . .....
T Consensus 164 --~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~-~--~~~~~ 230 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS-------EVMLKIREGTF-T--FPEKD 230 (277)
T ss_dssp --CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCC-C--CCHHH
T ss_pred --chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCCC-C--CCchh
Confidence 23344699999999998654 899999999999999999999999743211 11111111100 0 00000
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.. ..+..+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 231 WL----NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hh----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 12367899999999999999999999975
No 146
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.6e-41 Score=337.44 Aligned_cols=249 Identities=29% Similarity=0.399 Sum_probs=207.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
+.|+..+.||+|+||.||+|... +++.||||++...........+.+|+.+++.++||||+++++++......++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 46888999999999999999965 68999999998665555567899999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCcee
Q 008893 306 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 385 (549)
Q Consensus 306 ~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 385 (549)
+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........ ..
T Consensus 102 ~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 176 (303)
T 3a7i_A 102 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KR 176 (303)
T ss_dssp CTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-CB
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc-cc
Confidence 999999999875 4699999999999999999999999 999999999999999999999999999987654321 22
Q ss_pred eccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCC
Q 008893 386 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 465 (549)
Q Consensus 386 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 465 (549)
....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... ..+.+...+
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~------~~~~~~~~~ 243 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-------KVLFLIPKN------NPPTLEGNY 243 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHS------CCCCCCSSC
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-------HHHHHhhcC------CCCCCcccc
Confidence 3456899999999999999999999999999999999999998643211 111111111 011122222
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 466 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 466 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
+..+.+++.+||+.||++|||+.|++++
T Consensus 244 ----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 244 ----SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ----CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ----CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 3668999999999999999999999864
No 147
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-41 Score=342.91 Aligned_cols=258 Identities=22% Similarity=0.227 Sum_probs=200.6
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC----CCCcHHHHHHHHHHHhhccCCCccceEEEEecCC
Q 008893 223 QSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN----AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 297 (549)
Q Consensus 223 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 297 (549)
....++|.+.+.||+|+||+||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 445678999999999999999999975 68899999986432 2334567999999999999999999999999999
Q ss_pred ceeeEeeccCCCchhhhhcc----------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 008893 298 ERLLVYPYMSNGSVASRLKA----------------------------------------KPSLDWATRKRIALGAARGL 337 (549)
Q Consensus 298 ~~~lv~e~~~~g~L~~~l~~----------------------------------------~~~l~~~~~~~i~~~i~~~L 337 (549)
..++||||+++|+|.+++.. ...+++..+..++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999998851 11235777889999999999
Q ss_pred HHhhhcCCCceEecccCcCeeeecCCC--ceEEeecccccccCCCCC---ceeeccccccCccCchhhcc--CCCCCccc
Q 008893 338 LYLHEQCDPKIIHRDVKAANILLDEYY--EAVVGDFGLAKLLDHCDS---HVTTAVRGTVGHIAPEYLST--GQSSEKTD 410 (549)
Q Consensus 338 ~~LH~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 410 (549)
.|||+. +|+||||||+||+++.++ .+||+|||+++.+..... .......||+.|+|||.+.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998766 899999999986543221 12344569999999999975 67899999
Q ss_pred chhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 008893 411 VFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPK 490 (549)
Q Consensus 411 v~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 490 (549)
|||||+++|||++|+.||...... +........... ...+. ....+..+.+++.+||+.||++||+
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLC--FENPN-----YNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCC--TTSGG-----GGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcccc--cCCcc-----cccCCHHHHHHHHHHcCCChhHCCC
Confidence 999999999999999999643321 111111111100 00000 0112367899999999999999999
Q ss_pred HHHHHHH
Q 008893 491 MSEVVRM 497 (549)
Q Consensus 491 ~~evl~~ 497 (549)
+.|++++
T Consensus 325 ~~~~l~h 331 (345)
T 3hko_A 325 AMRALQH 331 (345)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 9999873
No 148
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.5e-42 Score=340.58 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=201.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECC-C-------CEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQD-G-------TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~-g-------~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 298 (549)
++|.+.+.||+|+||+||+|.... + ..||+|++.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 568888999999999999998653 3 479999986543 2345679999999999999999999999999999
Q ss_pred eeeEeeccCCCchhhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc--------eEEe
Q 008893 299 RLLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--------AVVG 369 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--------~kl~ 369 (549)
.++||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 999999999999999997654 399999999999999999999999 9999999999999998887 9999
Q ss_pred ecccccccCCCCCceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHh
Q 008893 370 DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 448 (549)
Q Consensus 370 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 448 (549)
|||++..... .....||+.|+|||.+.+ ..++.++||||||+++|||+||..|+....... .......
T Consensus 164 Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~------~~~~~~~ 232 (289)
T 4fvq_A 164 DPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ------RKLQFYE 232 (289)
T ss_dssp CCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHH
T ss_pred cCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH------HHHHHhh
Confidence 9999875432 223458899999999987 678999999999999999999765554322111 1111111
Q ss_pred hccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCCC
Q 008893 449 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 503 (549)
Q Consensus 449 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 503 (549)
.... + +...+..+.+++.+||+.||++|||+.|++++|+....
T Consensus 233 ~~~~--------~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 233 DRHQ--------L----PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp TTCC--------C----CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred ccCC--------C----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 1000 1 11112458899999999999999999999999998533
No 149
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-42 Score=339.78 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=195.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeecc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 306 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 306 (549)
++|++.+.||+|+||+||+|.+. ++.||||++... .....+.+|+.+++.++||||+++++++. +..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 46788899999999999999986 788999998643 23557899999999999999999999876 4589999999
Q ss_pred CCCchhhhhccCC---CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc-eEEeecccccccCCCCC
Q 008893 307 SNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-AVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 307 ~~g~L~~~l~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~~~ 382 (549)
++|+|.+++.... .+++..+..++.|++.||.|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 9999999997654 4789999999999999999999932239999999999999998886 799999999765422
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||....... ........... .+...
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~~------~~~~~ 226 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA-----FRIMWAVHNGT------RPPLI 226 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH-----HHHHHHHHTTC------CCCCB
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH-----HHHHHHHhcCC------CCCcc
Confidence 223458999999999999999999999999999999999999996432211 11111111110 11111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
. ..+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 227 ~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 260 (307)
T 2eva_A 227 K----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTH 260 (307)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred c----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 1 223678899999999999999999999999986
No 150
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.1e-42 Score=353.87 Aligned_cols=267 Identities=22% Similarity=0.341 Sum_probs=191.9
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhcc-CCCccceEEEEecCC--ce
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTT--ER 299 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~ 299 (549)
..++|++.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999975 689999999865422 222346788999999997 999999999997544 68
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
++||||++ ++|.+++... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEEecccC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 99999998 5898888764 689999999999999999999999 999999999999999999999999999986532
Q ss_pred CC--------------------CceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccc
Q 008893 380 CD--------------------SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 438 (549)
Q Consensus 380 ~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 438 (549)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 241 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLE 241 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 11 112234569999999999976 678999999999999999999999997543222111
Q ss_pred cHHHHHHHHhhccchhhh--------c----------cccccCCC------------CHHHHHHHHHHHHHhcccCCCCC
Q 008893 439 AMLDWVKKIHQEKKLEML--------V----------DKDLKNNY------------DRIELEEMVQVALLCTQYLPSLR 488 (549)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~--------~----------d~~l~~~~------------~~~~~~~l~~l~~~cl~~dP~~R 488 (549)
.+...+.. .....+..+ . .......+ .......+.+++.+||+.||++|
T Consensus 242 ~i~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 242 RIIGVIDF-PSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHCC-CCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHhcCC-CCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 11100000 000000000 0 00000000 00123578999999999999999
Q ss_pred CCHHHHHHH
Q 008893 489 PKMSEVVRM 497 (549)
Q Consensus 489 Ps~~evl~~ 497 (549)
||++|++++
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999999875
No 151
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.5e-42 Score=348.72 Aligned_cols=208 Identities=21% Similarity=0.266 Sum_probs=180.3
Q ss_pred ccccCHHHHHHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-----CCCcc
Q 008893 214 LKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-----HRNLL 287 (549)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv 287 (549)
...+++++.+...++|.+.+.||+|+||+||+|... +++.||||+++... .....+..|+.++..+. ||||+
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 345555555566789999999999999999999974 68999999997432 22345778999999886 99999
Q ss_pred ceEEEEecCCceeeEeeccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC---
Q 008893 288 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--- 362 (549)
Q Consensus 288 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~--- 362 (549)
++++++...+..++||||+ +++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 9999999999999999999 899999997543 599999999999999999999999 9999999999999975
Q ss_pred ----------------------CCceEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHH
Q 008893 363 ----------------------YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 420 (549)
Q Consensus 363 ----------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~e 420 (549)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 789999999999865432 234568999999999999999999999999999999
Q ss_pred HHhCCcccccC
Q 008893 421 LISGLRALEFG 431 (549)
Q Consensus 421 lltg~~p~~~~ 431 (549)
|+||+.||...
T Consensus 252 ll~g~~pf~~~ 262 (360)
T 3llt_A 252 LYTGSLLFRTH 262 (360)
T ss_dssp HHHSSCSCCCS
T ss_pred HHHCCCCCCCC
Confidence 99999999753
No 152
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=332.16 Aligned_cols=248 Identities=25% Similarity=0.362 Sum_probs=184.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|... +|+.||||++.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 56888999999999999999974 68999999986432 1223457899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 304 PYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 304 e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999999999764 5799999999999999999999999 999999999999999999999999999987653222
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||.+.+..++.++||||||+++|||+||+.||......... . .+.....
T Consensus 168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~---------~~~~~~~- 229 (278)
T 3cok_A 168 -KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-------N---------KVVLADY- 229 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSSCC-
T ss_pred -cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH-------H---------HHhhccc-
Confidence 223356899999999999989999999999999999999999999753322110 0 0000000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
..+...+..+.+++.+||+.||++|||++++++
T Consensus 230 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 230 -EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 112223467899999999999999999999986
No 153
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-41 Score=337.61 Aligned_cols=254 Identities=30% Similarity=0.436 Sum_probs=200.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECC----CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEec-CCceee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT-TTERLL 301 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~l 301 (549)
.+|.+.+.||+|+||+||+|...+ +..||+|.+...........+.+|+.++++++||||+++++++.. ....++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999998643 236899998765544445679999999999999999999999754 557899
Q ss_pred EeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 302 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999999975 45689999999999999999999999 9999999999999999999999999999866432
Q ss_pred CC---ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCc-ccccCccccccccHHHHHHHHhhccchhhh
Q 008893 381 DS---HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLR-ALEFGKTANQKGAMLDWVKKIHQEKKLEML 456 (549)
Q Consensus 381 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (549)
.. .......+|+.|+|||.+.+..++.++||||||+++|||++|.. ||....... ... ......
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~----~~~---~~~~~~----- 249 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITV---YLLQGR----- 249 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT----HHH---HHHTTC-----
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH----HHH---HHhcCC-----
Confidence 21 12233457889999999999999999999999999999999554 443222111 111 111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 457 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 457 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 250 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 250 -----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 001111223678999999999999999999999999986
No 154
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=342.48 Aligned_cols=247 Identities=16% Similarity=0.186 Sum_probs=201.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEE------ECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc---CCCccceEEEEec
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGY------LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV---HRNLLRLIGFCMT 295 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 295 (549)
..++|.+.+.||+|+||+||+|. ..+++.||||+++.. ....+..|+.++..++ |+|++++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 34678889999999999999994 446889999999753 2456778888887776 9999999999999
Q ss_pred CCceeeEeeccCCCchhhhhc-----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC--------
Q 008893 296 TTERLLVYPYMSNGSVASRLK-----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-------- 362 (549)
Q Consensus 296 ~~~~~lv~e~~~~g~L~~~l~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-------- 362 (549)
.+..++||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 999999999999999999996 355799999999999999999999998 9999999999999998
Q ss_pred ---CCceEEeecccccccCCC-CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccc
Q 008893 363 ---YYEAVVGDFGLAKLLDHC-DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 438 (549)
Q Consensus 363 ---~~~~kl~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 438 (549)
++.+||+|||+++.+... .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-- 293 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-- 293 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--
Confidence 899999999999765422 23344556799999999999999999999999999999999999999864322111
Q ss_pred cHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHhc
Q 008893 439 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLR-PKMSEVVRMLEG 500 (549)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~evl~~L~~ 500 (549)
.. ...+... + ..+.+.+++..|++.+|.+| |+++++.+.|+.
T Consensus 294 -------------~~----~~~~~~~-~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 294 -------------KP----EGLFRRL-P--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp -------------EE----CSCCTTC-S--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred -------------ee----chhcccc-C--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 01 1111111 1 13567889999999999999 567777777765
No 155
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.5e-42 Score=351.85 Aligned_cols=266 Identities=21% Similarity=0.275 Sum_probs=205.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|++.+.||+|+||.||+|... +++.||+|+++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357889999999999999999976 6899999999866443445578999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
|+++++|.+++.....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~ 186 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 186 (360)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---c
Confidence 9999999999987778999999999999999999999831 7999999999999999999999999999755321 2
Q ss_pred eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccH----------------------HH
Q 008893 385 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM----------------------LD 442 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~----------------------~~ 442 (549)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||............ ..
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266 (360)
T ss_dssp ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------
T ss_pred ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccc
Confidence 23346899999999999999999999999999999999999999753321100000 00
Q ss_pred HHHHHhhccch----hhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 443 WVKKIHQEKKL----EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 443 ~~~~~~~~~~~----~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
+.......... ..+.............+..+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000000000 0000000000011112467899999999999999999999985
No 156
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.9e-41 Score=339.61 Aligned_cols=266 Identities=24% Similarity=0.322 Sum_probs=208.6
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhh--ccCCCccceEEEEecC
Q 008893 219 FKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTT 296 (549)
Q Consensus 219 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~ 296 (549)
+.--....++|.+.+.||+|+||.||+|... |+.||||++... ....+..|.+++.. ++||||+++++++...
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3333455678999999999999999999984 899999998643 24567788888877 7899999999999877
Q ss_pred C----ceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCceEecccCcCeeeecCCC
Q 008893 297 T----ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEYY 364 (549)
Q Consensus 297 ~----~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~Nill~~~~ 364 (549)
. ..++||||+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+||+++.++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence 6 789999999999999999764 5899999999999999999999 66 999999999999999999
Q ss_pred ceEEeecccccccCCCCCc---eeeccccccCccCchhhccCC------CCCcccchhHhHHHHHHHhC----------C
Q 008893 365 EAVVGDFGLAKLLDHCDSH---VTTAVRGTVGHIAPEYLSTGQ------SSEKTDVFGFGILLLELISG----------L 425 (549)
Q Consensus 365 ~~kl~Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~s~G~il~elltg----------~ 425 (549)
.+||+|||++......... ......||+.|+|||.+.+.. ++.++||||||+++|||+|| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876544332 123446999999999997763 33689999999999999999 5
Q ss_pred cccccCccccccccHHHHHHHHhhccchhhhccccccCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 426 RALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 426 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.||........ ....+........ ..+.+... ........+.+++.+||+.||++|||+.||+++|+.
T Consensus 265 ~p~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 265 LPYYDLVPSDP--SVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp CTTTTTSCSSC--CHHHHHHHHTTSC-----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cCccccCcCcc--cHHHHHHHHHHHH-----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 66654322111 1222222221111 11111111 123566789999999999999999999999999986
No 157
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-41 Score=341.04 Aligned_cols=257 Identities=21% Similarity=0.261 Sum_probs=203.0
Q ss_pred HHHHhcCCCCC-CeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhcc-CCCccceEEEEecCC
Q 008893 222 LQSATSNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTT 297 (549)
Q Consensus 222 ~~~~~~~~~~~-~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 297 (549)
.+...+.|.+. +.||+|+||.||+|... +|+.||+|+++.... ......+.+|+.++..+. ||||+++++++....
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 34445567776 89999999999999976 589999999975432 233567899999999884 699999999999999
Q ss_pred ceeeEeeccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC---CCceEEeecc
Q 008893 298 ERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFG 372 (549)
Q Consensus 298 ~~~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg 372 (549)
..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 99999999999999999864 36799999999999999999999999 9999999999999997 7899999999
Q ss_pred cccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccc
Q 008893 373 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 452 (549)
Q Consensus 373 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (549)
+++...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||....... .........
T Consensus 180 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-------~~~~i~~~~- 249 (327)
T 3lm5_A 180 MSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-------TYLNISQVN- 249 (327)
T ss_dssp GCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHTC-
T ss_pred cccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-------HHHHHHhcc-
Confidence 998765332 2234569999999999999999999999999999999999999996432211 111111100
Q ss_pred hhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 453 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 453 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...........+..+.+++.+||+.||++|||++|++++
T Consensus 250 ------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 250 ------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 001111112234678999999999999999999999864
No 158
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.6e-42 Score=349.38 Aligned_cols=245 Identities=23% Similarity=0.274 Sum_probs=195.1
Q ss_pred CCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeeccCCCc
Q 008893 232 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 310 (549)
Q Consensus 232 ~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 310 (549)
.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|+.+++.++||||+++++++...+..++||||+++++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 568999999999999975 689999999976432 334578999999999999999999999999999999999999999
Q ss_pred hhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee--cCCCceEEeecccccccCCCCCceeec
Q 008893 311 VASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL--DEYYEAVVGDFGLAKLLDHCDSHVTTA 387 (549)
Q Consensus 311 L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill--~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 387 (549)
|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||+ ++++.+||+|||+++...... ....
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~ 247 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKV 247 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cccc
Confidence 9998864 34699999999999999999999999 99999999999999 567899999999998765432 2233
Q ss_pred cccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCCCH
Q 008893 388 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDR 467 (549)
Q Consensus 388 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 467 (549)
..||+.|+|||++.+..++.++|||||||++|||+||+.||...... .....+...... ........
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~---~~~~~~~~--- 314 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-------ETLNNILACRWD---LEDEEFQD--- 314 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCCC---SCSGGGTT---
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccCC---CChhhhcc---
Confidence 46999999999999889999999999999999999999999753321 111111111100 00011111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 468 IELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 468 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 315 -~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 -ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2367899999999999999999999987
No 159
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=348.35 Aligned_cols=261 Identities=21% Similarity=0.300 Sum_probs=194.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
++|.+.+.||+|+||+||+|... +++.||+|++...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888999999999999999976 68999999997544322222455799999999999999999999999999999999
Q ss_pred cCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 306 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 306 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
++ |+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 97 588888764 44699999999999999999999999 999999999999999999999999999986543222 2
Q ss_pred eeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc---chhhhcc--
Q 008893 385 TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK---KLEMLVD-- 458 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d-- 458 (549)
.....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||........ ...+....... .......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ----LHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCCCTTTSTTGGGCH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCChHhchhhhcch
Confidence 234468999999999876 5689999999999999999999999975432211 11111111000 0000000
Q ss_pred -------ccccCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 459 -------KDLKNN----YDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 459 -------~~l~~~----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
+..... ........+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 00112367889999999999999999999986
No 160
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-41 Score=345.29 Aligned_cols=246 Identities=30% Similarity=0.394 Sum_probs=200.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCC--cHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
+.|...+.||+|+||+||+|.. .+|+.||||++....... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4578889999999999999996 468999999997543222 2246889999999999999999999999999999999
Q ss_pred eccCCCchhhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 304 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 304 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
||+. |+|.+.+. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 57877775 456799999999999999999999999 9999999999999999999999999999865432
Q ss_pred ceeeccccccCccCchhhc---cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 383 HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
....||+.|+|||.+. ...++.++|||||||++|||+||+.||..... ............ +
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-------~~~~~~~~~~~~------~ 271 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNES------P 271 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCC------C
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhcCC------C
Confidence 2346999999999985 56789999999999999999999999864321 111111111110 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
... ....+..+.+++.+||+.||++|||+++++++
T Consensus 272 ~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 272 ALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 110 11223668899999999999999999999864
No 161
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3e-41 Score=350.51 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=195.0
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-------CCcHHHHHHHHHHHhhccCCCccceEEEEec
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAVHRNLLRLIGFCMT 295 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 295 (549)
...++|.+.+.||+|+||+||+|... +++.||||++..... ......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999975 589999999865321 1112248899999999999999999999754
Q ss_pred CCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCC---CceEEeecc
Q 008893 296 TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY---YEAVVGDFG 372 (549)
Q Consensus 296 ~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg 372 (549)
+..++||||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred -CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecc
Confidence 55799999999999999998888899999999999999999999999 99999999999999754 459999999
Q ss_pred cccccCCCCCceeeccccccCccCchhhcc---CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh
Q 008893 373 LAKLLDHCDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 449 (549)
Q Consensus 373 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 449 (549)
+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|+||+.||........ +...+..
T Consensus 288 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~---~~~~i~~--- 359 (419)
T 3i6u_A 288 HSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS---LKDQITS--- 359 (419)
T ss_dssp TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC---HHHHHHT---
T ss_pred cceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH---HHHHHhc---
Confidence 99876532 22344569999999999864 5678899999999999999999999975332211 1111110
Q ss_pred ccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 450 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 450 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.... ..+..... .+..+.+++.+||+.||++|||+.|++++
T Consensus 360 -~~~~--~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 -GKYN--FIPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -TCCC--CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCCC--CCchhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0000 00000011 23678999999999999999999999874
No 162
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.9e-41 Score=341.28 Aligned_cols=266 Identities=22% Similarity=0.319 Sum_probs=202.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
++|++.+.||+|+||.||+|... +|+.||||++....... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 56888899999999999999976 48999999987554322 23457899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCce
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 384 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 384 (549)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 180 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-V 180 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-c
Confidence 999999999887777899999999999999999999999 999999999999999999999999999986653222 2
Q ss_pred eeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHH--------HHHHHhhccchhh
Q 008893 385 TTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--------WVKKIHQEKKLEM 455 (549)
Q Consensus 385 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 455 (549)
.....||+.|+|||.+.+. .++.++||||||+++|+|+||+.||...........+.. +............
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 3344689999999999875 689999999999999999999999975432211111100 0000011111111
Q ss_pred hccccccCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 456 LVDKDLKNNYD-----RIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 456 ~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
...+......+ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111111111 122467999999999999999999999986
No 163
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7.3e-42 Score=343.65 Aligned_cols=255 Identities=27% Similarity=0.389 Sum_probs=203.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE------CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 299 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 299 (549)
.++|.+.+.||+|+||.||+|.+ .+++.||||++...........+.+|+.+++.++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999984 247799999997554444455789999999999999999999999999999
Q ss_pred eeEeeccCCCchhhhhccC-------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec---CCCceEEe
Q 008893 300 LLVYPYMSNGSVASRLKAK-------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVG 369 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~ 369 (549)
++||||+++++|.+++... ..+++..++.++.||+.||.|||+. +|+||||||+|||++ ++..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999743 3489999999999999999999999 999999999999998 44569999
Q ss_pred ecccccccCCCCC-ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHH
Q 008893 370 DFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKI 447 (549)
Q Consensus 370 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 447 (549)
|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||..... .......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~~~ 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLEFV 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-------HHHHHHH
Confidence 9999976543222 12234458899999999999999999999999999999998 8889864321 1111111
Q ss_pred hhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 448 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 448 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
..... ...+...+..+.+++.+||+.||++||++.|++++|+.
T Consensus 259 ~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 259 TSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hcCCC----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 11110 11122234678999999999999999999999999886
No 164
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.2e-41 Score=355.61 Aligned_cols=264 Identities=18% Similarity=0.225 Sum_probs=195.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecC------C
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT------T 297 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 297 (549)
.++|++.+.||+|+||+||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 367889999999999999999965 589999999975422 22345688999999999999999999999654 3
Q ss_pred ceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeeccccccc
Q 008893 298 ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 377 (549)
Q Consensus 298 ~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 377 (549)
..++||||+++ ++.+.+.. .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 56999999986 46666643 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHH------------
Q 008893 378 DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK------------ 445 (549)
Q Consensus 378 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~------------ 445 (549)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.....
T Consensus 215 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred CCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 532 223445799999999999999999999999999999999999999975432221111111000
Q ss_pred ---HHhhc------cchhhhccccccCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 446 ---KIHQE------KKLEMLVDKDLKNN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 446 ---~~~~~------~~~~~~~d~~l~~~---~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..... ......+...+... ........+.+++.+||+.||++|||++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00000000000000 011225678999999999999999999999874
No 165
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-41 Score=334.39 Aligned_cols=244 Identities=25% Similarity=0.397 Sum_probs=202.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEec--------
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT-------- 295 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 295 (549)
...+|+..+.||+|+||.||+|... +|+.||+|+++... ..+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 3457889999999999999999986 79999999997543 246789999999999999999998854
Q ss_pred --------CCceeeEeeccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc
Q 008893 296 --------TTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 365 (549)
Q Consensus 296 --------~~~~~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 365 (549)
....++||||+++++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+||++++++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCC
Confidence 3457899999999999999964 35799999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHH
Q 008893 366 AVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 445 (549)
Q Consensus 366 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 445 (549)
+||+|||++....... ......||+.|+|||.+.+..++.++||||||+++|||+||..|+... ..+..
T Consensus 161 ~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---------~~~~~ 229 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---------SKFFT 229 (284)
T ss_dssp EEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH---------HHHHH
T ss_pred EEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH---------HHHHH
Confidence 9999999998765432 223345999999999999999999999999999999999998887521 11111
Q ss_pred HHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 446 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 446 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
... +..+...+ +..+.+++.+||+.||++|||+.|++++|+.
T Consensus 230 ~~~---------~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~ 271 (284)
T 2a19_B 230 DLR---------DGIISDIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 271 (284)
T ss_dssp HHH---------TTCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred Hhh---------cccccccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111 11111222 3568899999999999999999999999976
No 166
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.4e-41 Score=369.82 Aligned_cols=247 Identities=27% Similarity=0.354 Sum_probs=199.6
Q ss_pred CeeeeeCCeEEEEEEEC---CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeeccCC
Q 008893 233 NLVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSN 308 (549)
Q Consensus 233 ~~iG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 308 (549)
+.||+|+||+||+|.+. .++.||||+++..... .....+.+|++++..++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 4678999999765332 234679999999999999999999999964 568899999999
Q ss_pred CchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc--eee
Q 008893 309 GSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH--VTT 386 (549)
Q Consensus 309 g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~ 386 (549)
|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.+...... ...
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999998888899999999999999999999999 9999999999999999999999999999877543322 223
Q ss_pred ccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccccCCC
Q 008893 387 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 465 (549)
Q Consensus 387 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 465 (549)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... .....+... .....
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~----------~~~~~ 593 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKG----------ERMGC 593 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTT----------CCCCC
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcC----------CCCCC
Confidence 3347789999999999999999999999999999999 99999643221 111111111 11112
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 466 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 466 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
+...+..+.+++..||+.||++||++.+|++.|++
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 23344789999999999999999999999999985
No 167
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.1e-41 Score=336.43 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=196.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC--CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|... +|+.||+|+++..... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 46888999999999999999974 6899999999754322 22346889999999999999999999999999999999
Q ss_pred eccCCCchhhhhcc----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 304 PYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 304 e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
||+++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999998863 55799999999999999999999999 999999999999999999999999999986653
Q ss_pred CCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............. ..
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~-~~----- 256 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIEQCD-YP----- 256 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHHHHTTC-SC-----
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHHhhccc-CC-----
Confidence 222 22334689999999999999999999999999999999999999864321 1112222221111 00
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.. .....+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 257 ~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~ 294 (310)
T 2wqm_A 257 PL---PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294 (310)
T ss_dssp CC---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC---cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 00 011223678999999999999999999999999986
No 168
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-41 Score=338.74 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=195.7
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEEC----CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCCc
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 298 (549)
...++|.+.+.||+|+||.||+|... .+..||+|+++..... .....+.+|+.+++.++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567889999999999999999864 2458999999755422 223468999999999999999999999987553
Q ss_pred -----eeeEeeccCCCchhhhhc------cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceE
Q 008893 299 -----RLLVYPYMSNGSVASRLK------AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV 367 (549)
Q Consensus 299 -----~~lv~e~~~~g~L~~~l~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 367 (549)
.++||||+++|+|.+++. ....+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 499999999999999983 345799999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCc-eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHH
Q 008893 368 VGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 445 (549)
Q Consensus 368 l~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 445 (549)
|+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |..||....... ....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----~~~~-- 261 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE----MYDY-- 261 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HHHH--
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH----HHHH--
Confidence 9999999876433221 2233457889999999999999999999999999999999 888886432211 1111
Q ss_pred HHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 446 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 446 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
..... ....+...+..+.+++.+||+.||++|||+.+++++|+.
T Consensus 262 -~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 262 -LLHGH----------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp -HHTTC----------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHcCC----------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11110 011122233679999999999999999999999999986
No 169
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.2e-41 Score=333.99 Aligned_cols=247 Identities=28% Similarity=0.396 Sum_probs=197.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecC-CceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-TERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e 304 (549)
.++|++.+.||+|+||.||+|... |+.||||+++... ....+.+|+.+++.++||||+++++++... +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 357888999999999999999885 8899999997543 345789999999999999999999997655 47899999
Q ss_pred ccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 305 YMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997543 389999999999999999999999 9999999999999999999999999999755432
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
.....+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... .. ...... .
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~----~~---~~~~~~----------~ 231 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----VV---PRVEKG----------Y 231 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG----HH---HHHTTT----------C
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH----HH---HHHhcC----------C
Confidence 122357889999999999999999999999999999998 999986432211 11 111111 1
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+||+.||++||++.|+++.|+.
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 270 (278)
T 1byg_A 232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270 (278)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence 111222334679999999999999999999999999886
No 170
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-41 Score=334.29 Aligned_cols=246 Identities=24% Similarity=0.375 Sum_probs=205.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888999999999999999976 57899999986432 1233457899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS---
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc---
Confidence 9999999999998777899999999999999999999999 9999999999999999999999999999765432
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... +.
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~-------~~---- 229 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------ETHRRIVNV-------DL---- 229 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTT-------CC----
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-------HHHHHHhcc-------cc----
Confidence 223456899999999999999999999999999999999999999643211 111111110 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.++...+..+.+++.+|++.||++||+++|+++
T Consensus 230 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 230 KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 112223467899999999999999999999985
No 171
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.9e-41 Score=358.38 Aligned_cols=249 Identities=23% Similarity=0.305 Sum_probs=204.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
.++|...+.||+|+||.||+|... +|+.||+|++.... .......+..|+.+++.++||||+++++++......++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888899999999999999986 69999999996432 123345788999999999999999999999999999999
Q ss_pred eeccCCCchhhhhcc----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 303 YPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999998864 34699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
.... .....+||+.|+|||++.+..++.++|||||||++|||+||+.||......... ..........
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~---~~~~~~i~~~-------- 408 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN---KELKQRVLEQ-------- 408 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH---HHHHHHHHHC--------
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH---HHHHHHHhhc--------
Confidence 4322 233457999999999999999999999999999999999999999754322111 1111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS 492 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 492 (549)
. ..++...+..+.+++.+||+.||++||++.
T Consensus 409 -~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 409 -A--VTYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp -C--CCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred -c--cCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 0 112223346789999999999999999763
No 172
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.9e-41 Score=333.74 Aligned_cols=244 Identities=24% Similarity=0.372 Sum_probs=198.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 302 (549)
.++|++.+.||+|+||+||+|... +++.||+|+++.... ......+.+|+..+..+ +||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999986 699999999976432 22345688899999988 999999999999999999999
Q ss_pred eeccCCCchhhhhccC----CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC----------------
Q 008893 303 YPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---------------- 362 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---------------- 362 (549)
|||+++++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999743 5799999999999999999999999 9999999999999984
Q ss_pred ---CCceEEeecccccccCCCCCceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccc
Q 008893 363 ---YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 438 (549)
Q Consensus 363 ---~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 438 (549)
...+||+|||.+....... ...||+.|+|||.+.+. .++.++||||||+++|+|++|..++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 4479999999998765432 23489999999999776 56789999999999999999987764211
Q ss_pred cHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 439 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
. + ..... ... +.+ +...+..+.+++.+||+.||++|||+.|++++
T Consensus 236 -~--~-~~~~~-~~~-----~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 -Q--W-HEIRQ-GRL-----PRI----PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -H--H-HHHHT-TCC-----CCC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -H--H-HHHHc-CCC-----CCC----CcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0 1 11111 111 111 12223678999999999999999999999863
No 173
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.2e-41 Score=334.83 Aligned_cols=249 Identities=22% Similarity=0.311 Sum_probs=206.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC--CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|... +++.||+|++...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 56888999999999999999976 5889999998754322 23446889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 170 (294)
T 2rku_A 95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 170 (294)
T ss_dssp ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc-
Confidence 9999999999998777899999999999999999999999 999999999999999999999999999987653222
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
......||+.|+|||.+.+..++.++||||||+++|+|+||+.||...... +......... .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~-------~---- 232 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------ETYLRIKKNE-------Y---- 232 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTTC-------C----
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhhcc-------C----
Confidence 233456899999999999989999999999999999999999999643211 1111111110 0
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..+......+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1111223678899999999999999999999863
No 174
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5.3e-41 Score=335.56 Aligned_cols=256 Identities=20% Similarity=0.236 Sum_probs=198.6
Q ss_pred cCCCCC-CeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~-~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 303 (549)
+.|.+. +.||+|+||+||+|... +++.||||++.... ......+.+|+.++.++ +||||+++++++...+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 457764 78999999999999964 68999999997653 34456789999999884 7999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc---eEEeecccccccCCC
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLAKLLDHC 380 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~ 380 (549)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred EcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 9999999999998777899999999999999999999999 9999999999999998766 999999999765422
Q ss_pred CC------ceeeccccccCccCchhhcc-----CCCCCcccchhHhHHHHHHHhCCcccccCcccccccc--------HH
Q 008893 381 DS------HVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA--------ML 441 (549)
Q Consensus 381 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~--------~~ 441 (549)
.. .......||+.|+|||.+.. ..++.++|||||||++|||+||+.||........... ..
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11223459999999999875 4578999999999999999999999976443221100 00
Q ss_pred HHHHHHhhccchhhhccccccCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 442 DWVKKIHQEKKLEMLVDKDLKNNYDR----IELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 442 ~~~~~~~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
........ .. ..++. ..+..+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~i~~-~~----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 248 MLFESIQE-GK----------YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHH-CC----------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhc-cC----------cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 01111111 00 01111 123678999999999999999999999873
No 175
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.6e-40 Score=338.90 Aligned_cols=257 Identities=20% Similarity=0.309 Sum_probs=206.6
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCc-------HHHHHHHHHHHhhc-cCCCccceEEE
Q 008893 222 LQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGG-------EIQFQTEVEMISLA-VHRNLLRLIGF 292 (549)
Q Consensus 222 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~-------~~~~~~e~~~l~~l-~h~niv~l~~~ 292 (549)
.....++|.+.+.||+|+||.||+|... +|+.||||++........ ...+.+|+.++..+ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445678999999999999999999986 699999999875432111 23578899999999 79999999999
Q ss_pred EecCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecc
Q 008893 293 CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 372 (549)
Q Consensus 293 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 372 (549)
+......++||||+++++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecC
Confidence 999999999999999999999998777899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeeccccccCccCchhhcc------CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHH
Q 008893 373 LAKLLDHCDSHVTTAVRGTVGHIAPEYLST------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 446 (549)
Q Consensus 373 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 446 (549)
++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......
T Consensus 246 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-------~~~~~~ 316 (365)
T 2y7j_A 246 FSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-------ILMLRM 316 (365)
T ss_dssp TCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHH
T ss_pred cccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-------HHHHHH
Confidence 998765432 2334569999999999864 3578899999999999999999999964221 111111
Q ss_pred HhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 447 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 447 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..... .. ........ .+..+.+++.+||+.||++|||+.|++++
T Consensus 317 i~~~~-~~--~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 IMEGQ-YQ--FSSPEWDD----RSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHTC-CC--CCHHHHSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhCC-CC--CCCccccc----CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11110 00 00000011 13568999999999999999999999873
No 176
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=339.28 Aligned_cols=258 Identities=25% Similarity=0.310 Sum_probs=201.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEe----cCCcee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM----TTTERL 300 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~ 300 (549)
.++|++.+.||+|+||.||++.. .+|+.||||++.... ......+.+|+.+++.++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 35788999999999999999997 468999999986543 233456899999999999999999999987 334788
Q ss_pred eEeeccCCCchhhhhcc----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccc
Q 008893 301 LVYPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 376 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 376 (549)
+||||+++|+|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999998864 56799999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCc--------eeeccccccCccCchhhccCC---CCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHH
Q 008893 377 LDHCDSH--------VTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 445 (549)
Q Consensus 377 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 445 (549)
....... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||........ ......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~- 260 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--SVALAV- 260 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS--CHHHHH-
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc--hhhHHh-
Confidence 5321110 012234799999999987654 68999999999999999999999863211111 111100
Q ss_pred HHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCC
Q 008893 446 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 502 (549)
Q Consensus 446 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 502 (549)
. ...........+..+.+++.+||+.||++|||+.|++++|+...
T Consensus 261 --~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 261 --Q----------NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp --H----------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred --h----------ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 0 00001111222367999999999999999999999999998743
No 177
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.3e-42 Score=337.17 Aligned_cols=253 Identities=24% Similarity=0.346 Sum_probs=203.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEec--CCceeeE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT--TTERLLV 302 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 302 (549)
++|++.+.||+|+||.||+|... +|+.||+|.+...... .....+.+|+.+++.++||||+++++++.. ....++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 57888999999999999999976 6899999999765422 234468999999999999999999998753 5678999
Q ss_pred eeccCCCchhhhhcc----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCc-----eEecccCcCeeeecCCCceEEeeccc
Q 008893 303 YPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPK-----IIHRDVKAANILLDEYYEAVVGDFGL 373 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~Nill~~~~~~kl~Dfg~ 373 (549)
|||+++++|.+++.. ...+++..++.++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 999999999999863 34599999999999999999999998 7 99999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccch
Q 008893 374 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 453 (549)
Q Consensus 374 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (549)
++....... ......||+.|+|||.+.+..++.++||||||+++|+|+||+.||..... ......... ...
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~-~~~ 233 (279)
T 2w5a_A 163 ARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-------KELAGKIRE-GKF 233 (279)
T ss_dssp HHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-TCC
T ss_pred heeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-------HHHHHHHhh-ccc
Confidence 987653321 22334689999999999999999999999999999999999999874321 111111111 111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 454 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 454 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...+...+..+.+++.+||+.||++||++.|+++++..
T Consensus 234 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 234 ---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 01122234678999999999999999999999987765
No 178
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.6e-41 Score=340.76 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=205.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC--CcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||++... +++.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 46778899999999999999976 4889999998754322 23446889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++++|.+++.....+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 196 (335)
T 2owb_A 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 196 (335)
T ss_dssp CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-
Confidence 9999999999998777899999999999999999999999 999999999999999999999999999987653222
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
......||..|+|||.+.+..++.++||||||+++|||++|+.||...... .......... ..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~-------~~--- 259 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------ETYLRIKKNE-------YS--- 259 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTC-------CC---
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-------HHHHHHhcCC-------CC---
Confidence 233456999999999999999999999999999999999999999643211 1111111110 01
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.+......+.+++.+||+.||++||++.|+++
T Consensus 260 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 260 -IPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11122356889999999999999999999986
No 179
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=344.66 Aligned_cols=256 Identities=17% Similarity=0.203 Sum_probs=203.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECC---------CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccc---------
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQD---------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR--------- 288 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 288 (549)
++|.+.+.||+|+||.||+|.... ++.||+|++... ..+.+|+.++..++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 578899999999999999999763 789999998754 25789999999999999988
Q ss_pred ------eEEEEec-CCceeeEeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeee
Q 008893 289 ------LIGFCMT-TTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANIL 359 (549)
Q Consensus 289 ------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil 359 (549)
+++++.. ....++||||+ +++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6777765 67889999999 99999999865 6799999999999999999999999 9999999999999
Q ss_pred ecCCC--ceEEeecccccccCCCCCc------eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccC
Q 008893 360 LDEYY--EAVVGDFGLAKLLDHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFG 431 (549)
Q Consensus 360 l~~~~--~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~ 431 (549)
++.++ .+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876432211 123346999999999999999999999999999999999999999754
Q ss_pred ccccccccHHHHHHHHhhccchhhhcccccc-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 432 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLK-NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.... ..+......... ....+.+.... ..+ +..+.+++.+||+.||++||+++++++.|+.
T Consensus 272 ~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 272 LPNT--EDIMKQKQKFVD--KPGPFVGPCGHWIRP----SETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp TTCH--HHHHHHHHHHHH--SCCCEECTTSCEECC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred CcCH--HHHHHHHHhccC--ChhhhhhhccccCCC----cHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 3111 112222111111 11111111100 112 3679999999999999999999999999986
No 180
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-40 Score=347.65 Aligned_cols=200 Identities=25% Similarity=0.332 Sum_probs=168.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecC-----Cc
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TE 298 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 298 (549)
.++|.+.+.||+|+||.||+|... +|+.||||+++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357899999999999999999975 5889999999754322 2235688999999999999999999999765 56
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
.++||||+. |+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 899999987 59999999888899999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc---------------------eeeccccccCccCchhh-ccCCCCCcccchhHhHHHHHHHhCCcccc
Q 008893 379 HCDSH---------------------VTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELISGLRALE 429 (549)
Q Consensus 379 ~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~il~elltg~~p~~ 429 (549)
..... ......||+.|+|||++ ....++.++|||||||++|||++|..|+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 33211 12455799999999986 55679999999999999999998655543
No 181
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=341.46 Aligned_cols=265 Identities=26% Similarity=0.401 Sum_probs=197.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHH--HhhccCCCccceEEEEec-----CCc
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEM--ISLAVHRNLLRLIGFCMT-----TTE 298 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~~~ 298 (549)
.++|++.+.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++||||+++++++.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 35788899999999999999987 58999999996432 2334444444 456899999999986542 235
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcC------CCceEecccCcCeeeecCCCceEEeecc
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC------DPKIIHRDVKAANILLDEYYEAVVGDFG 372 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 372 (549)
.++||||+++|+|.+++.... .++..+..++.||+.||.|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 689999999999999997654 599999999999999999999863 3389999999999999999999999999
Q ss_pred cccccCCCCC-------ceeeccccccCccCchhhcc-------CCCCCcccchhHhHHHHHHHhCCcccccCccccccc
Q 008893 373 LAKLLDHCDS-------HVTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 438 (549)
Q Consensus 373 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 438 (549)
+++.+..... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.|+..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9987653221 12234469999999999976 345678999999999999999988876543322211
Q ss_pred -cHH---------HHHHHHhhccchhhhccccccCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 439 -AML---------DWVKKIHQEKKLEMLVDKDLKNN--YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 439 -~~~---------~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.+. ............ .+.+... .....+..+.+++.+||+.||++|||++|+++.|+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HhhhcccCCCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 100 000111100000 0111111 123456789999999999999999999999999987
No 182
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.8e-42 Score=338.91 Aligned_cols=260 Identities=28% Similarity=0.390 Sum_probs=186.8
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
...++|.+.+.||+|+||.||+|... +++.||||++...........+.+|+.+++.++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34578999999999999999999854 68999999987654444455788999999999999999999999999999999
Q ss_pred eeccCCCchhhhhcc--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccc
Q 008893 303 YPYMSNGSVASRLKA--------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA 374 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 374 (549)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999862 45699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----ceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh
Q 008893 375 KLLDHCDS----HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 449 (549)
Q Consensus 375 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 449 (549)
........ .......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||........ . ......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~--~~~~~~ 242 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV----L--MLTLQN 242 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH----H--HHHHTS
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH----H--HHHhcc
Confidence 87643221 11234468999999999876 5689999999999999999999999975332111 0 111111
Q ss_pred cc-ch-hhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 450 EK-KL-EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 450 ~~-~~-~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.. .. ....+......+ +..+.+++.+||+.||++||++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 243 DPPSLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCCCTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00 00 011111112222 357889999999999999999999986
No 183
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.5e-41 Score=331.15 Aligned_cols=248 Identities=22% Similarity=0.339 Sum_probs=197.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|... +|+.||||++.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888999999999999999986 69999999986432 2234557899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 9999999999998777899999999999999999999999 99999999999999999999999999998765322
Q ss_pred eeeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... ...........
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~----------- 227 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------PTLFKKIRGGV----------- 227 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-----------
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHhhcCc-----------
Confidence 2234468999999999988765 6899999999999999999999964221 11111111110
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...+......+.+++.+|++.||++|||+.|++++
T Consensus 228 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00111223678899999999999999999999974
No 184
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-40 Score=350.77 Aligned_cols=194 Identities=23% Similarity=0.354 Sum_probs=155.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecC-----Cce
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TER 299 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 299 (549)
++|++.+.||+|+||+||+|... +|+.||||++...... .....+.+|+.+++.++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57899999999999999999965 6899999998654322 2235688999999999999999999998543 568
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
++||||+. ++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999984 69999998888899999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC--------------------------ceeeccccccCccCchhh-ccCCCCCcccchhHhHHHHHHHhC
Q 008893 380 CDS--------------------------HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELISG 424 (549)
Q Consensus 380 ~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~il~elltg 424 (549)
... .......||+.|+|||++ ....++.++|||||||++|||+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 211 122345689999999986 456799999999999999999994
No 185
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5e-41 Score=331.60 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=198.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEec----CCceee
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTERLL 301 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 301 (549)
.|.+.+.||+|+||.||+|... ++..||+|.+...... .....+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3667788999999999999975 5889999998754322 234468999999999999999999999865 345899
Q ss_pred EeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEecccCcCeeeec-CCCceEEeecccccccC
Q 008893 302 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLD-EYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~-~~~~~kl~Dfg~~~~~~ 378 (549)
||||+++++|.+++.....+++..+..++.|++.||.|||+. + |+||||||+||+++ +++.+||+|||++....
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 999999999999998777899999999999999999999998 7 99999999999998 78999999999997654
Q ss_pred CCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
.. ......||+.|+|||.+. +.++.++||||||+++|+|+||+.||...... .............
T Consensus 184 ~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~----- 248 (290)
T 1t4h_A 184 AS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA------AQIYRRVTSGVKP----- 248 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------HHHHHHHTTTCCC-----
T ss_pred cc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH------HHHHHHHhccCCc-----
Confidence 32 223456999999999886 45899999999999999999999999643221 1111111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..... ..+..+.+++.+||+.||++|||+.|++++
T Consensus 249 ~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 ASFDK----VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGGGG----CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccCC----CCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01111 112568999999999999999999999863
No 186
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1e-40 Score=353.52 Aligned_cols=251 Identities=25% Similarity=0.352 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC--CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++......++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356888999999999999999976 689999999965432 33456799999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee---cCCCceEEeecccccccCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~~ 379 (549)
|||+.+|+|.+.+.....+++..+..++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999999998888899999999999999999999999 99999999999999 5678999999999987654
Q ss_pred CCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.. ......||+.|+|||.+.+ .++.++|||||||++|+|++|+.||..... ......+....... ..
T Consensus 182 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~---~~ 248 (484)
T 3nyv_A 182 SK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-------YDILKKVEKGKYTF---EL 248 (484)
T ss_dssp CC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCC---CS
T ss_pred cc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCC---CC
Confidence 32 2334569999999999866 699999999999999999999999974321 11111211111000 00
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 249 PQ----WKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GG----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00 0122367899999999999999999999985
No 187
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-41 Score=340.95 Aligned_cols=266 Identities=23% Similarity=0.294 Sum_probs=198.0
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC----cHHHHHHHHHHHhhccCCCccceEEEEecCCce
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 299 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 299 (549)
..++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.+++.++||||+++++++......
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4568999999999999999999975 58999999997543211 123578999999999999999999999999999
Q ss_pred eeEeeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 300 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
++||||+++ +|.+.+... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999986 888887654 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc--cchh-
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--KKLE- 454 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 454 (549)
.... ......||+.|+|||.+.+. .++.++|||||||++|||++|..||........ +.......... ....
T Consensus 164 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 164 SPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ---LTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp SCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCTTTSSS
T ss_pred CCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHHHcCCCChhhhhh
Confidence 3322 23345689999999999764 488999999999999999999999865332111 11111111000 0000
Q ss_pred --hhccc---cccCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 008893 455 --MLVDK---DLKNNYD-----RIELEEMVQVALLCTQYLPSLRPKMSEVVRML 498 (549)
Q Consensus 455 --~~~d~---~l~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 498 (549)
...+. ......+ ...+..+.+++.+|++.||++|||+.|++++-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 00000 0000001 12236799999999999999999999999753
No 188
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.2e-41 Score=347.06 Aligned_cols=274 Identities=19% Similarity=0.232 Sum_probs=200.1
Q ss_pred CHHHHHHHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCc----------HHHHHHHHHHHhhccCCCcc
Q 008893 218 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGG----------EIQFQTEVEMISLAVHRNLL 287 (549)
Q Consensus 218 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~----------~~~~~~e~~~l~~l~h~niv 287 (549)
...++....++|.+.+.||+|+||.||+|...+|+.||||++........ ...+.+|+.+++.++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35677888899999999999999999999988899999999865332211 25789999999999999999
Q ss_pred ceEEEEec-----CCceeeEeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec
Q 008893 288 RLIGFCMT-----TTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD 361 (549)
Q Consensus 288 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 361 (549)
++++++.. ....++||||+. |+|.+.+.. ...+++..+..++.||+.||.|||+. +|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 99999854 335799999998 578777764 44799999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccccccCCCCCceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccH
Q 008893 362 EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 440 (549)
Q Consensus 362 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~ 440 (549)
.++.+||+|||+++...... ......||+.|+|||.+.+ ..++.++|||||||++|+|+||+.||...........+
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999997544322 2334568999999999877 67899999999999999999999999754322111111
Q ss_pred HHHHHHH-------hhccchhhhccccccC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 441 LDWVKKI-------HQEKKLEMLVDKDLKN-------NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 441 ~~~~~~~-------~~~~~~~~~~d~~l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
....... ................ .........+.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 1100000 0000000000000000 0011123668999999999999999999999863
No 189
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.9e-40 Score=333.61 Aligned_cols=257 Identities=17% Similarity=0.240 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-CCCccceEEEEec--CCceeeE
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMT--TTERLLV 302 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv 302 (549)
++|++.+.||+|+||+||+|... +++.||||+++.. ....+.+|+.++..++ ||||+++++++.. ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 57888999999999999999864 6899999998743 3467899999999997 9999999999987 5678999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC-ceEEeecccccccCCCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY-EAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~ 381 (549)
|||+++++|.+++.. +++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 112 ~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp EECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred EeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 999999999998853 88999999999999999999999 999999999999999776 89999999998765432
Q ss_pred CceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc---------
Q 008893 382 SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK--------- 451 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 451 (549)
. .....||..|+|||.+.+ ..++.++|||||||++|||+||+.||........ .+...........
T Consensus 186 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 186 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH--HHHHHHHHHCHHHHHHHHHHTT
T ss_pred c--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH--HHHHHHHhcCCchhhhHHHHhc
Confidence 2 234468999999999977 6789999999999999999999999964332111 1111111000000
Q ss_pred -----chhhhcc--------ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 452 -----KLEMLVD--------KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 452 -----~~~~~~d--------~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
....... ...........+..+.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000 000011111234779999999999999999999999864
No 190
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=337.11 Aligned_cols=262 Identities=24% Similarity=0.381 Sum_probs=205.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE-----CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCC--ce
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--ER 299 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~ 299 (549)
++|++.+.||+|+||.||+|.+ .+|+.||||++.... ......+.+|+.+++.++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 5678889999999999999984 358899999997643 233457999999999999999999999987654 68
Q ss_pred eeEeeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 300 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999754 4699999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCce--eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc------
Q 008893 379 HCDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE------ 450 (549)
Q Consensus 379 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 450 (549)
...... .....++..|+|||.+.+..++.++||||||+++|||+||..|+..... .+.......
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~--------~~~~~~~~~~~~~~~ 268 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA--------EFMRMIGNDKQGQMI 268 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH--------HHHHHHCTTCCTHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH--------HHHHhhccccchhhh
Confidence 443321 1233477789999999988899999999999999999999988763210 000000000
Q ss_pred -cchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 451 -KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 451 -~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
..+...+........+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 269 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 00011111111111223344779999999999999999999999999986
No 191
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-41 Score=347.85 Aligned_cols=260 Identities=20% Similarity=0.286 Sum_probs=195.7
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecC-----
Q 008893 223 QSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT----- 296 (549)
Q Consensus 223 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 296 (549)
+...++|.+.+.||+|+||+||+|... +|+.||||++...... ..+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 345678999999999999999999974 6999999998754322 23799999999999999999998442
Q ss_pred ---------------------------------CceeeEeeccCCCchhhhhc----cCCCCCHHHHHHHHHHHHHHHHH
Q 008893 297 ---------------------------------TERLLVYPYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLY 339 (549)
Q Consensus 297 ---------------------------------~~~~lv~e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~i~~~L~~ 339 (549)
...++||||+++ +|.+.+. ....+++..+..++.||+.||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 337899999984 7766654 46679999999999999999999
Q ss_pred hhhcCCCceEecccCcCeeeec-CCCceEEeecccccccCCCCCceeeccccccCccCchhhccC-CCCCcccchhHhHH
Q 008893 340 LHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGIL 417 (549)
Q Consensus 340 LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~i 417 (549)
||+. +|+||||||+|||++ +++.+||+|||+++...... ......||+.|+|||.+.+. .++.++|||||||+
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9999 999999999999998 68999999999998765332 22344689999999998775 48999999999999
Q ss_pred HHHHHhCCcccccCccccccccHHHHHHHHhhc---------cc-----hhhhccccccCCCCHHHHHHHHHHHHHhccc
Q 008893 418 LLELISGLRALEFGKTANQKGAMLDWVKKIHQE---------KK-----LEMLVDKDLKNNYDRIELEEMVQVALLCTQY 483 (549)
Q Consensus 418 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~-----~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~ 483 (549)
+|||++|+.||......+. +...+...... .. ............++...+..+.+++.+||+.
T Consensus 232 l~ell~g~~pf~~~~~~~~---~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQ---LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 9999999999975432221 11111110000 00 0000001111111222346789999999999
Q ss_pred CCCCCCCHHHHHH
Q 008893 484 LPSLRPKMSEVVR 496 (549)
Q Consensus 484 dP~~RPs~~evl~ 496 (549)
||++|||+.|+++
T Consensus 309 dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 309 EPDLRINPYEAMA 321 (383)
T ss_dssp SGGGSCCHHHHHT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999985
No 192
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.7e-41 Score=334.90 Aligned_cols=251 Identities=22% Similarity=0.329 Sum_probs=204.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|.+.+.||+|+||.||++... +|+.||+|+++.... .....+.+|+.+++.++||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 357889999999999999999976 689999999975432 233468899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee---cCCCceEEeecccccccCCCC
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++ ++++.+||+|||++......
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 87 LVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred cCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 999999999998777899999999999999999999999 99999999999999 78899999999999754322
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ........... . ..
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~-~------~~ 226 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-------SKLFEKIKEGY-Y------EF 226 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHCC-C------CC
T ss_pred --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-C------CC
Confidence 22334689999999999999999999999999999999999999964321 11111111110 0 00
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
........+..+.+++.+|++.||++|||+.|++++
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011112234678999999999999999999999863
No 193
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.1e-42 Score=351.73 Aligned_cols=240 Identities=13% Similarity=0.119 Sum_probs=190.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCC--CCCcHHHHHHHH---HHHhhccCCCccceE-------EE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGN--AIGGEIQFQTEV---EMISLAVHRNLLRLI-------GF 292 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~ 292 (549)
.++|.+.+.||+|+||+||+|.. .+|+.||||++.... .......+.+|+ +.++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 469999999997542 223345789999 455566899999998 66
Q ss_pred EecCCc-----------------eeeEeeccCCCchhhhhccCCCCC-------HHHHHHHHHHHHHHHHHhhhcCCCce
Q 008893 293 CMTTTE-----------------RLLVYPYMSNGSVASRLKAKPSLD-------WATRKRIALGAARGLLYLHEQCDPKI 348 (549)
Q Consensus 293 ~~~~~~-----------------~~lv~e~~~~g~L~~~l~~~~~l~-------~~~~~~i~~~i~~~L~~LH~~~~~~i 348 (549)
+...+. .++||||+ +|+|.+++.....++ +..+..|+.||+.||.|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 665532 78999999 689999997543344 488889999999999999999 99
Q ss_pred EecccCcCeeeecCCCceEEeecccccccCCCCCceeeccccccCccCchhhccC-----------CCCCcccchhHhHH
Q 008893 349 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-----------QSSEKTDVFGFGIL 417 (549)
Q Consensus 349 vH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~G~i 417 (549)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985432 3344567 999999999887 89999999999999
Q ss_pred HHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 418 LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 418 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
+|||+||+.||......... ..+... ...+ +..+.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~~----------------~~~~~~--~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGS----------------EWIFRS--CKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CCS----------------GGGGSS--CCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccch----------------hhhhhh--ccCC----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999643321111 111110 0122 367899999999999999999999986
No 194
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.5e-40 Score=352.07 Aligned_cols=252 Identities=23% Similarity=0.311 Sum_probs=202.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC------------CcHHHHHHHHHHHhhccCCCccceEEE
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI------------GGEIQFQTEVEMISLAVHRNLLRLIGF 292 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~niv~l~~~ 292 (549)
.++|.+.+.||+|+||+||+|... +++.||+|++...... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467889999999999999999976 5889999999754321 234578999999999999999999999
Q ss_pred EecCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC---ceEEe
Q 008893 293 CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVVG 369 (549)
Q Consensus 293 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~ 369 (549)
+......++||||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999999999998777899999999999999999999999 999999999999998775 69999
Q ss_pred ecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh
Q 008893 370 DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 449 (549)
Q Consensus 370 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 449 (549)
|||+++...... ......||+.|+|||.+. +.++.++|||||||++|+|++|+.||..... ......+..
T Consensus 192 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~ 261 (504)
T 3q5i_A 192 DFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-------QDIIKKVEK 261 (504)
T ss_dssp CCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH
T ss_pred ECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHc
Confidence 999998765432 233456999999999986 4689999999999999999999999974322 111222211
Q ss_pred ccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 450 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 450 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.... .+...... .+..+.+++.+|++.||++|||+.|++++
T Consensus 262 ~~~~---~~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYY---FDFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCC---CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCC---CCccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1100 00000011 23678999999999999999999999863
No 195
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-41 Score=344.17 Aligned_cols=261 Identities=22% Similarity=0.282 Sum_probs=195.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCC------c
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT------E 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 298 (549)
++|...+.||+|+||.||+|... +|+.||||++...... .....+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 57888999999999999999975 6999999999654322 22346889999999999999999999997653 4
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
.++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 59999999 7899999876 4699999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHH--------HHHhh
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV--------KKIHQ 449 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~--------~~~~~ 449 (549)
.. .....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.... .....
T Consensus 180 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 180 SE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp SS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred cc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 32 234568999999999887 679999999999999999999999997543221111111000 00000
Q ss_pred c------cchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 450 E------KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 450 ~------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
. ..+.......+. .........+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 000000000110 1112234678999999999999999999999974
No 196
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=342.64 Aligned_cols=250 Identities=24% Similarity=0.285 Sum_probs=184.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-CCCccceEEEEe--------c
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCM--------T 295 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~ 295 (549)
..+|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++..+. ||||+++++++. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 347888999999999999999975 68999999986543 233456889999999996 999999999994 2
Q ss_pred CCceeeEeeccCCCchhhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEecccCcCeeeecCCCceEEee
Q 008893 296 TTERLLVYPYMSNGSVASRLKA---KPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGD 370 (549)
Q Consensus 296 ~~~~~lv~e~~~~g~L~~~l~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~D 370 (549)
....+++|||+. |+|.+++.. ...+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 334789999996 689888753 55799999999999999999999998 7 99999999999999999999999
Q ss_pred cccccccCCCCCce-----------eeccccccCccCchhh---ccCCCCCcccchhHhHHHHHHHhCCcccccCccccc
Q 008893 371 FGLAKLLDHCDSHV-----------TTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ 436 (549)
Q Consensus 371 fg~~~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~ 436 (549)
||+++......... .....||+.|+|||.+ .+..++.++||||||+++|||+||+.||........
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 261 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI 261 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh
Confidence 99998765432211 1134589999999998 566788999999999999999999999964321110
Q ss_pred cccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 437 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
.. ..............+.+++.+||+.||++|||+.|++++|+.
T Consensus 262 -------~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 305 (337)
T 3ll6_A 262 -------VN-------------GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE 305 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred -------hc-------------CcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00 000000011112457899999999999999999999999986
No 197
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.4e-41 Score=340.75 Aligned_cols=263 Identities=23% Similarity=0.323 Sum_probs=199.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecC--------
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-------- 296 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 296 (549)
++|++.+.||+|+||+||+|... +|+.||||++...... .....+.+|+.+++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57888999999999999999974 6899999998654432 2345688999999999999999999998763
Q ss_pred CceeeEeeccCCCchhhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeeccccc
Q 008893 297 TERLLVYPYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 375 (549)
Q Consensus 297 ~~~~lv~e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 375 (549)
+..++||||+++ +|.+.+. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 468999999986 6666665 345799999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---ceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc
Q 008893 376 LLDHCDS---HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 451 (549)
Q Consensus 376 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 451 (549)
....... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||........ ...+.......
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~ 248 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ----LALISQLCGSI 248 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCC
Confidence 7653222 22234568999999999876 4589999999999999999999999975332211 11111111000
Q ss_pred c---hhhhcccccc--------CCCC-HH------HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 452 K---LEMLVDKDLK--------NNYD-RI------ELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 452 ~---~~~~~d~~l~--------~~~~-~~------~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
. .......... .... .. ....+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0 0000000000 0000 00 12458899999999999999999999873
No 198
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.4e-41 Score=332.73 Aligned_cols=262 Identities=20% Similarity=0.306 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
++|+..+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999976 689999999975432 2223568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 305 YMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 305 ~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|+. ++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 998 6999988744 4689999999999999999999999 999999999999999999999999999987653221
Q ss_pred ceeeccccccCccCchhhccCC-CCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccc--hhhh---
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK--LEML--- 456 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 456 (549)
......+|+.|+|||.+.+.. ++.++||||||+++|+|+||+.||........ +............ ....
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ---LFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGS
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCchhhhhHhhcC
Confidence 223345899999999998765 79999999999999999999999975332111 1111111100000 0000
Q ss_pred --ccccccC----CC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 457 --VDKDLKN----NY---DRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 457 --~d~~l~~----~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
..+.... .+ ....+.++.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 00 0112367899999999999999999999986
No 199
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.5e-40 Score=329.88 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=198.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-------CCcHHHHHHHHHHHhhccCCCccceEEEEecCC
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 297 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 297 (549)
.++|.+.+.||+|+||.||+|... +++.||||++..... ......+.+|+.+++.++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457899999999999999999975 588999999865321 112234889999999999999999999987654
Q ss_pred ceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc---eEEeecccc
Q 008893 298 ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLA 374 (549)
Q Consensus 298 ~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg~~ 374 (549)
.++||||+++++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred -eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 899999999999999998888899999999999999999999999 9999999999999987654 999999999
Q ss_pred cccCCCCCceeeccccccCccCchhhc---cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhcc
Q 008893 375 KLLDHCDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 451 (549)
Q Consensus 375 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 451 (549)
+..... .......||+.|+|||.+. ...++.++||||||+++|+|++|+.||....... .+...+.. .
T Consensus 165 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~----~ 235 (322)
T 2ycf_A 165 KILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQITS----G 235 (322)
T ss_dssp EECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS---CHHHHHHH----T
T ss_pred eecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH---HHHHHHHh----C
Confidence 876432 2223456999999999974 4678999999999999999999999997533221 12111111 0
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 452 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 452 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
... ..+..... .+..+.+++.+||+.||++||++.|++++
T Consensus 236 ~~~--~~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 236 KYN--FIPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCC--CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccc--cCchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 000 00001111 23678999999999999999999999863
No 200
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.7e-40 Score=350.98 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=199.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
++|.+.+.||+|+||+||+|... ++..||+|++..... ......+.+|+.+++.++||||+++++++......++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46888999999999999999976 688999999975432 2335578999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC---CCceEEeecccccccCCCC
Q 008893 305 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 305 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~ 381 (549)
|+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~ 193 (494)
T 3lij_A 117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193 (494)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence 999999999998777899999999999999999999999 9999999999999975 4569999999998765432
Q ss_pred CceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccc
Q 008893 382 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 461 (549)
Q Consensus 382 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 461 (549)
......||+.|+|||++. ..++.++|||||||++|+|++|+.||..... ............ ..+...
T Consensus 194 --~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~---~~~~~~ 260 (494)
T 3lij_A 194 --KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-------QEILRKVEKGKY---TFDSPE 260 (494)
T ss_dssp --CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCC---CCCSGG
T ss_pred --cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCC---CCCchh
Confidence 233456999999999986 5699999999999999999999999974322 111122111110 001111
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 462 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 462 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
... .+..+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~----~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 261 WKN----VSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccc----CCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 111 2367889999999999999999999985
No 201
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=327.60 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=197.4
Q ss_pred CCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEeecc
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 306 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 306 (549)
+|.....||+|+||.||+|... +++.||||.+.... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 4555679999999999999964 68899999997654 233457899999999999999999999999999999999999
Q ss_pred CCCchhhhhccC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC-CCceEEeecccccccCCCCC
Q 008893 307 SNGSVASRLKAK---PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-YYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 307 ~~g~L~~~l~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~~~ 382 (549)
++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999998743 3567899999999999999999999 9999999999999987 89999999999987653221
Q ss_pred ceeeccccccCccCchhhccCC--CCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
......||+.|+|||.+.+.. ++.++||||||+++|+|+||+.||........ ....... . ...
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~-~-----~~~-- 244 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-----AMFKVGM-F-----KVH-- 244 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-----HHHHHHH-H-----CCC--
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-----HHHhhcc-c-----ccc--
Confidence 223446899999999997654 78999999999999999999999964221110 0000000 0 001
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
...+...+..+.+++.+||+.||++||++.|+++
T Consensus 245 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 245 --PEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp --CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred --ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1122223467899999999999999999999985
No 202
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.9e-40 Score=351.53 Aligned_cols=252 Identities=24% Similarity=0.339 Sum_probs=204.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC-CCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN-AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|.+.+.||+|+||+||+|... +++.||||++.... .......+.+|+.+++.++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 357889999999999999999976 68999999986432 2234567899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec---CCCceEEeecccccccCCC
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~ 380 (549)
||+.+|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999999999998777899999999999999999999999 999999999999995 5668999999999876533
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ............. .+..
T Consensus 178 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~---~~~~ 244 (486)
T 3mwu_A 178 T--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETGKYA---FDLP 244 (486)
T ss_dssp ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCC---SCSG
T ss_pred C--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC---CCCc
Confidence 2 2334569999999999875 589999999999999999999999964321 1111111111100 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
. ....+..+.+++.+||+.||++|||+.|++++
T Consensus 245 ~----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 245 Q----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred c----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 11223678999999999999999999999974
No 203
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.2e-40 Score=337.99 Aligned_cols=267 Identities=21% Similarity=0.267 Sum_probs=202.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecC-----Cce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TER 299 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 299 (549)
.++|++.+.||+|+||.||+|... +++.||||++...........+.+|++++..++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457899999999999999999975 68899999997544333345789999999999999999999999754 367
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
++||||+. |+|.+++... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEcccC-cCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 99999997 5899988764 599999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCce--eeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc------
Q 008893 380 CDSHV--TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE------ 450 (549)
Q Consensus 380 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 450 (549)
..... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...........+.........+
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 22211 234469999999998754 458999999999999999999999997544332211111110000000
Q ss_pred -----cchhhhcccccc--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 451 -----KKLEMLVDKDLK--NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 451 -----~~~~~~~d~~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
........+... ..........+.+++.+||+.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000 00001123678999999999999999999999863
No 204
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.7e-41 Score=331.54 Aligned_cols=251 Identities=20% Similarity=0.252 Sum_probs=185.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHH-HHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~-~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|++.+.||+|+||+||+|... +|+.||+|+++.......... +.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467889999999999999999974 689999999976543222233 445555578889999999999999999999999
Q ss_pred eccCCCchhhhhc----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 304 PYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 304 e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
||+++ +|.+++. ....+++..+..++.|++.||.|||+++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99974 8777664 4567999999999999999999999853 899999999999999999999999999987653
Q ss_pred CCCceeeccccccCccCchhh----ccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhh
Q 008893 380 CDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 455 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (549)
.. ......||+.|+|||.+ .+..++.++||||||+++|||+||+.||...... ............
T Consensus 163 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~--- 231 (290)
T 3fme_A 163 DV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPS--- 231 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCC---
T ss_pred cc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch------HHHHHHHhccCC---
Confidence 32 22334699999999996 5567899999999999999999999999642211 111111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 456 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 456 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
........+..+.+++.+|++.||++|||+.|+++
T Consensus 232 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 ------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 00011122367899999999999999999999975
No 205
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4e-41 Score=368.63 Aligned_cols=250 Identities=23% Similarity=0.282 Sum_probs=206.4
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC--CCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCcee
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 300 (549)
..++|++.+.||+|+||.||+|... +++.||||+++... .......+..|..++..+ +||||+++++++...+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999976 58899999997432 123345678889998877 7999999999999999999
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
+||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999999998877899999999999999999999999 9999999999999999999999999999864332
Q ss_pred CCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccc
Q 008893 381 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 460 (549)
Q Consensus 381 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 460 (549)
. .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ......+.. ..
T Consensus 496 ~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-------~~~~~~i~~---------~~ 558 (674)
T 3pfq_A 496 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIME---------HN 558 (674)
T ss_dssp T-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHS---------SC
T ss_pred C-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-------HHHHHHHHh---------CC
Confidence 2 234456799999999999999999999999999999999999999974321 111111111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 008893 461 LKNNYDRIELEEMVQVALLCTQYLPSLRPKM-----SEVVR 496 (549)
Q Consensus 461 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 496 (549)
..++...+.++.+++.+||+.||++||++ +||++
T Consensus 559 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 559 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11223344779999999999999999998 66654
No 206
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-39 Score=342.73 Aligned_cols=259 Identities=20% Similarity=0.251 Sum_probs=204.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEE-CCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccC-CCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH-RNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... .++..|++++..++| +++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 36789999999999999999997 46899999998754432 247789999999987 55566666667788889999
Q ss_pred eccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee---cCCCceEEeecccccccCC
Q 008893 304 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 304 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~~ 379 (549)
||+ +++|.+++.. ...+++..++.|+.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999 8999999974 55799999999999999999999999 99999999999999 6889999999999987754
Q ss_pred CCCc------eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccch
Q 008893 380 CDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 453 (549)
Q Consensus 380 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (549)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+....... .....
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-~~~~~ 237 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-VATSI 237 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH-HHSCH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc-ccccH
Confidence 3322 1224569999999999999999999999999999999999999997543322211111111111 11111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 454 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 454 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
..+. ..+ +.++.+++..||+.+|++||++.+|++.|+..
T Consensus 238 ~~l~-----~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 238 EALC-----RGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHH-----TTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHh-----cCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 1111 112 36789999999999999999999999888763
No 207
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.4e-41 Score=346.06 Aligned_cols=253 Identities=10% Similarity=0.005 Sum_probs=182.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC--CcHHHHHHHHHHHhhc--cCCCccceE-------EEEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLA--VHRNLLRLI-------GFCM 294 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~ 294 (549)
.+|...+.||+|+||+||+|.+. +|+.||||+++..... .....+.+|+.++..+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999976 6899999999875432 2234577885554444 699987754 4444
Q ss_pred cC-----------------CceeeEeeccCCCchhhhhcc-CCCCCHHHH------HHHHHHHHHHHHHhhhcCCCceEe
Q 008893 295 TT-----------------TERLLVYPYMSNGSVASRLKA-KPSLDWATR------KRIALGAARGLLYLHEQCDPKIIH 350 (549)
Q Consensus 295 ~~-----------------~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~ivH 350 (549)
.. ...++||||++ |+|.+++.. ...+++..+ ..++.||+.||+|||++ +|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCcc
Confidence 32 23799999999 899999974 334566667 78889999999999999 9999
Q ss_pred cccCcCeeeecCCCceEEeecccccccCCCCCceeeccccccCccCchhhcc--CCCCCcccchhHhHHHHHHHhCCccc
Q 008893 351 RDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRAL 428 (549)
Q Consensus 351 ~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~ 428 (549)
|||||+|||++.++.+||+|||+++.... ......+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999986542 2224457799999999987 67999999999999999999999999
Q ss_pred ccCccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 429 EFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.......... ......................+..+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGS---------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTC---------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccc---------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 7543221100 0000000000111111111223477999999999999999999999974
No 208
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.9e-41 Score=338.92 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=198.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHH-HhhccCCCccceEEEEecCCceeeEe
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEM-ISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.++|++.+.||+|+||+||+|... +|+.||||+++..........+..|... ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 467888899999999999999974 6899999999765444444455566655 77889999999999999999999999
Q ss_pred eccCCCchhhhhc----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 304 PYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 304 e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
||+++ +|.+++. ....+++..+..++.||+.||.|||++. +|+||||||+|||++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99985 8888775 4568999999999999999999999742 899999999999999999999999999987643
Q ss_pred CCCceeeccccccCccCchhhcc----CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhh
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLST----GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 455 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (549)
. .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...+........
T Consensus 207 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~--- 275 (340)
T 3an0_A 207 S--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPS--- 275 (340)
T ss_dssp H--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCC---
T ss_pred c--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------HHHHHHHhcCCC---
Confidence 2 12223469999999999743 46899999999999999999999999742211 111111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 456 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 456 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
+.. .....+..+.+++.+||+.||++||++.|+++
T Consensus 276 ---~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 ---PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ---CCC---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCC---CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 000 01122467899999999999999999999975
No 209
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=327.71 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=200.5
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
..++|++.+.||+|+||.||+|... +|+.||+|.+.... ....+.+|+.++..++||||+++++++......++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 4568999999999999999999976 58999999997643 2456889999999999999999999999999999999
Q ss_pred eccCCCchhhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 304 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 304 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
||+++++|.+++. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 9999999999986 456799999999999999999999999 999999999999999999999999999987653322
Q ss_pred ceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcccccc
Q 008893 383 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 462 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 462 (549)
......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... .+..
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~------~~~~- 245 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-------RAIFMIPTNP------PPTF- 245 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSC------CCCC-
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCC------Cccc-
Confidence 223446899999999999999999999999999999999999999643211 1111111110 0000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 463 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 463 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
..+...+..+.+++.+||+.||++|||+.++++
T Consensus 246 -~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 -RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 011122367899999999999999999999986
No 210
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=338.27 Aligned_cols=259 Identities=27% Similarity=0.371 Sum_probs=199.1
Q ss_pred cCHHHHHHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEe
Q 008893 217 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCM 294 (549)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 294 (549)
+.+.++....++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+|+.++..+ +||||+++++++.
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 344444556788999999999999999999975 68999999997543 2345788999999998 7999999999997
Q ss_pred c------CCceeeEeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCce
Q 008893 295 T------TTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEA 366 (549)
Q Consensus 295 ~------~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 366 (549)
. ....++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 6 46789999999999999999753 4699999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCceeeccccccCccCchhhc-----cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHH
Q 008893 367 VVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML 441 (549)
Q Consensus 367 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 441 (549)
||+|||++........ ......||+.|+|||.+. +..++.++||||||+++|+|+||+.||......
T Consensus 169 kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------- 240 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------- 240 (326)
T ss_dssp EECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------
T ss_pred EEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------
Confidence 9999999986643221 223346899999999987 567899999999999999999999999643211
Q ss_pred HHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 442 DWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 442 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.......... .+... ....+..+.+++.+||+.||++||++.|++++
T Consensus 241 ~~~~~~~~~~------~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 241 RALFLIPRNP------APRLK---SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHHHSC------CCCCS---CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhcCc------cccCC---ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111111110 01110 11123678999999999999999999999973
No 211
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.7e-41 Score=339.09 Aligned_cols=259 Identities=19% Similarity=0.287 Sum_probs=205.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCc----------------HHHHHHHHHHHhhccCCCccce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGG----------------EIQFQTEVEMISLAVHRNLLRL 289 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~----------------~~~~~~e~~~l~~l~h~niv~l 289 (549)
.++|.+.+.||+|+||.||+|.. +|+.||||++........ ...+.+|+.+++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788999999999999999999 899999999864322111 1679999999999999999999
Q ss_pred EEEEecCCceeeEeeccCCCchhhh------hcc--CCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceEecccCcCeeee
Q 008893 290 IGFCMTTTERLLVYPYMSNGSVASR------LKA--KPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILL 360 (549)
Q Consensus 290 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~--~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill 360 (549)
++++...+..++||||+++|+|.++ +.. ...+++..+..++.|++.||.|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998 665 5689999999999999999999998 8 99999999999999
Q ss_pred cCCCceEEeecccccccCCCCCceeeccccccCccCchhhccC-CCCC-cccchhHhHHHHHHHhCCcccccCccccccc
Q 008893 361 DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSE-KTDVFGFGILLLELISGLRALEFGKTANQKG 438 (549)
Q Consensus 361 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 438 (549)
+.++.+||+|||.+...... ......||..|+|||.+.+. .++. ++||||||+++|||+||+.||......
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 99999999999999876432 33445699999999999887 5666 999999999999999999999754321
Q ss_pred cHHHHHHHHhhccc-hhh----hccccc---cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 439 AMLDWVKKIHQEKK-LEM----LVDKDL---KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 439 ~~~~~~~~~~~~~~-~~~----~~d~~l---~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
............ ... ...+.. ........+..+.+++.+||+.||++|||+.|++++
T Consensus 259 --~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 --VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp --HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred --HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111111100 000 000000 000012234678999999999999999999999873
No 212
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.9e-41 Score=346.18 Aligned_cols=258 Identities=21% Similarity=0.317 Sum_probs=194.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCc------ee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE------RL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~ 300 (549)
.+|...+.||+|+||+||+|....+..||+|++...... ..+|+.+++.++||||+++++++..... .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 468889999999999999999987777999988654322 2368999999999999999999864432 78
Q ss_pred eEeeccCCCchhhhh---ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec-CCCceEEeecccccc
Q 008893 301 LVYPYMSNGSVASRL---KAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKL 376 (549)
Q Consensus 301 lv~e~~~~g~L~~~l---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~~~~ 376 (549)
+||||++++.+.... .....+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999875443332 2356799999999999999999999999 999999999999999 899999999999987
Q ss_pred cCCCCCceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc-----
Q 008893 377 LDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE----- 450 (549)
Q Consensus 377 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----- 450 (549)
...... .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||........ +...+......
T Consensus 192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ---LVEIIKVLGTPSREQI 266 (394)
T ss_dssp CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHH
T ss_pred ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHH
Confidence 643322 2345689999999998765 589999999999999999999999975432221 11111110000
Q ss_pred ---------cchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 451 ---------KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 451 ---------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..........+...+....+.++.+++.+||+.||++|||+.|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000001112234679999999999999999999999975
No 213
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.8e-41 Score=332.39 Aligned_cols=254 Identities=29% Similarity=0.378 Sum_probs=195.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC--CCC--EEEEEEcccCCC--CCcHHHHHHHHHHHhhccCCCccceEEEEecCCcee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ--DGT--VVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 300 (549)
++|++.+.||+|+||+||+|.+. +++ .||||+++.... ......+.+|+.+++.++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888999999999999999863 233 689999875432 223457899999999999999999999998754 88
Q ss_pred eEeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 301 LVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
+|+||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 99999999999999875 35699999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCce--eeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhh
Q 008893 380 CDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 456 (549)
Q Consensus 380 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (549)
..... .....+|..|+|||.+.+..++.++||||||+++|+|++ |+.||..... ............
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~---- 242 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQILHKIDKEGE---- 242 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTSCC----
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-------HHHHHHHHccCC----
Confidence 43321 223457889999999998889999999999999999999 9999864321 111122211110
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 457 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 457 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
....+...+..+.+++.+||+.||++|||+.+++++|+.
T Consensus 243 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 281 (291)
T 1u46_A 243 -----RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 281 (291)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 011122234679999999999999999999999999986
No 214
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=8.2e-41 Score=365.06 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=204.7
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEECC----CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCce
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 299 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 299 (549)
...++|++.+.||+|+||.||+|.+.. +..||||.++..........+.+|+.+++.++||||+++++++. .+..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 345678888999999999999999742 46799999876543334467999999999999999999999985 4568
Q ss_pred eeEeeccCCCchhhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 300 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999999754 4699999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccchhhhc
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 457 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (549)
...........+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... +..........
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-------~~~~~i~~~~~----- 610 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGER----- 610 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHHTCC-----
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHcCCC-----
Confidence 443333334457889999999999999999999999999999997 98998643211 11111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 458 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 458 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
...+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 611 -----~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~ 648 (656)
T 2j0j_A 611 -----LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 648 (656)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11122334678999999999999999999999999986
No 215
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.4e-40 Score=332.11 Aligned_cols=254 Identities=21% Similarity=0.296 Sum_probs=198.9
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhcc--CCCccceEEEEecCCcee
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAV--HRNLLRLIGFCMTTTERL 300 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~ 300 (549)
...++|++.+.||+|+||.||++...+++.||||++...... .....+.+|+.++..++ |+||+++++++......+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 345678899999999999999999888999999999754322 23356899999999997 599999999999999999
Q ss_pred eEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCC
Q 008893 301 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 380 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 380 (549)
+||| +.+++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++++ +.+||+|||+++.....
T Consensus 105 lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred EEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 9999 56789999998888899999999999999999999999 9999999999999965 89999999999876543
Q ss_pred CCc-eeeccccccCccCchhhcc-----------CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHh
Q 008893 381 DSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 448 (549)
Q Consensus 381 ~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 448 (549)
... ......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||...... ......
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~~-- 251 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLHA-- 251 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHH--
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH------HHHHHH--
Confidence 222 2234468999999999875 46888999999999999999999999642211 111111
Q ss_pred hccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 449 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 449 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..+......++...+..+.+++.+||+.||++||++.|++++
T Consensus 252 -------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 252 -------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp -------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------HHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111111112222224678999999999999999999999863
No 216
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.2e-40 Score=326.97 Aligned_cols=252 Identities=22% Similarity=0.264 Sum_probs=203.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC--------CcHHHHHHHHHHHhhcc-CCCccceEEEEec
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--------GGEIQFQTEVEMISLAV-HRNLLRLIGFCMT 295 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--------~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 295 (549)
.++|.+.+.||+|+||.||+|... +|+.||||++...... .....+.+|+.++.++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467889999999999999999986 5899999999754311 11235788999999995 9999999999999
Q ss_pred CCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeeccccc
Q 008893 296 TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 375 (549)
Q Consensus 296 ~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 375 (549)
....++||||+++++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchh
Confidence 999999999999999999998777899999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccCccCchhhc------cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh
Q 008893 376 LLDHCDSHVTTAVRGTVGHIAPEYLS------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 449 (549)
Q Consensus 376 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 449 (549)
...... ......||+.|+|||.+. ...++.++||||||+++|+|++|+.||..... .........
T Consensus 173 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~ 243 (298)
T 1phk_A 173 QLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------MLMLRMIMS 243 (298)
T ss_dssp ECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH
T ss_pred hcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-------HHHHHHHhc
Confidence 765432 223456899999999985 45678999999999999999999999964321 111111111
Q ss_pred ccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 450 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 450 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
... . .........+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~-~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GNY-Q------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TCC-C------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCc-c------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 110 0 000001123467899999999999999999999985
No 217
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.1e-40 Score=326.90 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=198.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 467889999999999999999986 58999999987543 3445678999999999999999999999999999999999
Q ss_pred ccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 305 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 305 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
|+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++...... ..
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HH
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cc
Confidence 9999999998864 55799999999999999999999999 9999999999999999999999999987543211 01
Q ss_pred eeeccccccCccCchhhc-----cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhcc
Q 008893 384 VTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 458 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 458 (549)
......||+.|+|||.+. ...++.++||||||+++|+|+||+.||...... ............ ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~-~~-- 242 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAKSDPP-TL-- 242 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCCC-CC--
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-------HHHHHHhccCCc-cc--
Confidence 122345899999999983 667899999999999999999999998743211 111111111100 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 459 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 459 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..+...+..+.+++.+||+.||++|||+.|++++
T Consensus 243 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 243 -----LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -----SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -----CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0111223678999999999999999999999864
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.6e-40 Score=335.24 Aligned_cols=263 Identities=19% Similarity=0.241 Sum_probs=192.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEecCC------c
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT------E 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 298 (549)
++|.+.+.||+|+||.||+|... +++.||||++...... .....+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57889999999999999999975 6889999999754322 22346889999999999999999999997654 6
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
.++||||+++ +|.+.+.. .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCSE-EHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCCC-CHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 7999999975 78887763 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHH--------HHH------
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML--------DWV------ 444 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~--------~~~------ 444 (549)
.. .......||+.|+|||.+.+..++.++|||||||++|||+||+.||...........+. .+.
T Consensus 179 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 256 (371)
T 2xrw_A 179 TS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 256 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred cc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence 32 22334569999999999999999999999999999999999999997543211100000 000
Q ss_pred -HHHhhc-c-----chhhhccccccCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 445 -KKIHQE-K-----KLEMLVDKDLKNN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 445 -~~~~~~-~-----~~~~~~d~~l~~~---~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...... . ............. ........+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000 0 0000000000000 112335789999999999999999999999874
No 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.3e-40 Score=346.62 Aligned_cols=197 Identities=22% Similarity=0.277 Sum_probs=170.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc------cCCCccceEEEEecCCc
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA------VHRNLLRLIGFCMTTTE 298 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~ 298 (549)
..+|++.+.||+|+||+||+|... +++.||||+++... .....+.+|+.++..+ .|+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 356889999999999999999876 58999999997532 2234677888888877 46799999999999999
Q ss_pred eeeEeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc--eEEeecccc
Q 008893 299 RLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--AVVGDFGLA 374 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~~ 374 (549)
.++||||+. ++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999996 6899888643 3599999999999999999999999 9999999999999999887 999999999
Q ss_pred cccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCc
Q 008893 375 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGK 432 (549)
Q Consensus 375 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~ 432 (549)
+..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 250 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 250 CYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 765432 233468999999999999999999999999999999999999997543
No 220
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.4e-40 Score=337.02 Aligned_cols=266 Identities=21% Similarity=0.259 Sum_probs=189.4
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCc-
Q 008893 221 ELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE- 298 (549)
Q Consensus 221 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 298 (549)
+.....++|.+.+.||+|+||.||+|... +|+.||||++...... ...+.+++..+..++||||+++++++.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 34566789999999999999999999975 6899999998654322 2346678888889999999999999865433
Q ss_pred ------eeeEeeccCCCchh---hhhccCCCCCHHHHHHHHHHHHHHHHHhh--hcCCCceEecccCcCeeeecC-CCce
Q 008893 299 ------RLLVYPYMSNGSVA---SRLKAKPSLDWATRKRIALGAARGLLYLH--EQCDPKIIHRDVKAANILLDE-YYEA 366 (549)
Q Consensus 299 ------~~lv~e~~~~g~L~---~~l~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlkp~Nill~~-~~~~ 366 (549)
.++||||++++.+. ........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 78999999875322 23345667999999999999999999999 77 9999999999999996 8999
Q ss_pred EEeecccccccCCCCCceeeccccccCccCchhhccCC-CCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHH
Q 008893 367 VVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 445 (549)
Q Consensus 367 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 445 (549)
||+|||+++...... ......||+.|+|||.+.+.. ++.++|||||||++|||+||+.||........ +.....
T Consensus 172 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~---~~~~~~ 246 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ---LHEIVR 246 (360)
T ss_dssp EECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHH
T ss_pred EEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH---HHHHHH
Confidence 999999998765432 233456899999999986654 89999999999999999999999975432211 111111
Q ss_pred HHhh-----------ccchhhhccc------cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 446 KIHQ-----------EKKLEMLVDK------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 446 ~~~~-----------~~~~~~~~d~------~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.... ........+. ..........+..+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1100 0000000000 0001111224578999999999999999999999985
No 221
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.2e-40 Score=338.90 Aligned_cols=263 Identities=19% Similarity=0.242 Sum_probs=200.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc--------CCCccceEEEEe--
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--------HRNLLRLIGFCM-- 294 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~-- 294 (549)
.++|.+.+.||+|+||+||+|... +++.||||+++... .....+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 367899999999999999999865 58899999997432 23456889999999886 788999999987
Q ss_pred --cCCceeeEeeccCCCchhhhhc-c-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC------
Q 008893 295 --TTTERLLVYPYMSNGSVASRLK-A-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY------ 364 (549)
Q Consensus 295 --~~~~~~lv~e~~~~g~L~~~l~-~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~------ 364 (549)
.....++||||+. +++.+.+. . ...+++..+..++.||+.||.|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 5567899999995 55655554 3 256999999999999999999999853 799999999999999775
Q ss_pred -------------------------------------------ceEEeecccccccCCCCCceeeccccccCccCchhhc
Q 008893 365 -------------------------------------------EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 401 (549)
Q Consensus 365 -------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 401 (549)
.+||+|||+++..... .....||+.|+|||++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 7999999999876432 23346899999999999
Q ss_pred cCCCCCcccchhHhHHHHHHHhCCcccccCcccccccc--HHHHHHHHhhc---------cchhhhcccc----------
Q 008893 402 TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA--MLDWVKKIHQE---------KKLEMLVDKD---------- 460 (549)
Q Consensus 402 ~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~d~~---------- 460 (549)
+..++.++|||||||++|||+||+.||........... ....+...... ......+...
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 99999999999999999999999999975443222111 11111111000 0000000000
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 461 ---------LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 461 ---------l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
-....+......+.+++.+||+.||++|||+.|++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012356677889999999999999999999999863
No 222
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.2e-40 Score=346.19 Aligned_cols=256 Identities=24% Similarity=0.324 Sum_probs=192.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecC----C--cee
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT----T--ERL 300 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~--~~~ 300 (549)
+|+..+.||+|+||.||+|.+. +|+.||||++..... ...+|+++++.++||||+++++++... + ..+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 5778899999999999999986 599999999875432 134699999999999999999998532 1 357
Q ss_pred eEeeccCCCchhhhhc----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCC-CceEEeeccccc
Q 008893 301 LVYPYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-YEAVVGDFGLAK 375 (549)
Q Consensus 301 lv~e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~~~ 375 (549)
+||||+++ ++.+.+. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999986 5655543 456799999999999999999999999 99999999999999955 678999999998
Q ss_pred ccCCCCCceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc--cc
Q 008893 376 LLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--KK 452 (549)
Q Consensus 376 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 452 (549)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+...+...... ..
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~---~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD---QLVEIIKVLGTPTREQ 280 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHH
Confidence 7653322 2345689999999998765 78999999999999999999999997543221 122222111000 00
Q ss_pred h-------hhhcccccc-----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 453 L-------EMLVDKDLK-----NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 453 ~-------~~~~d~~l~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
+ .....+.+. ..+....+.++.+|+.+||+.||++|||+.|++++
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0 000000000 00112234679999999999999999999999864
No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.4e-40 Score=337.54 Aligned_cols=262 Identities=21% Similarity=0.250 Sum_probs=182.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecC------Cc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT------TE 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 298 (549)
++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 57889999999999999999964 689999999975432 22344688999999999999999999998754 56
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
.++|+||+ +++|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 6899998876 4699999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHh-------hc
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH-------QE 450 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 450 (549)
.. .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...........+........ ..
T Consensus 184 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 184 DE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred cc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 22 234568999999999877 6789999999999999999999999975432211111111000000 00
Q ss_pred cchhhhccccc-cCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 451 KKLEMLVDKDL-KNNYD-----RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 451 ~~~~~~~d~~l-~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
......+.... ..... ......+.+++.+||+.||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000000000 00000 1123568999999999999999999999864
No 224
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.2e-41 Score=341.06 Aligned_cols=263 Identities=20% Similarity=0.254 Sum_probs=199.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecC-----Cce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TER 299 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 299 (549)
.++|.+.+.||+|+||.||+|... +|+.||||++...........+.+|+.+++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999976 68999999997544333345688999999999999999999998754 678
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
++||||+. ++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEeccC-ccHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 99999997 5899888764 599999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCc---------eeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh
Q 008893 380 CDSH---------VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 449 (549)
Q Consensus 380 ~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 449 (549)
.... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ ...+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~ 240 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ----LLLIFGIIG 240 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHHHHhC
Confidence 2211 1123468999999998765 6789999999999999999999999975432111 000000000
Q ss_pred ccc------------hhhhccccc-cC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 450 EKK------------LEMLVDKDL-KN-----NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 450 ~~~------------~~~~~d~~l-~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
... ..+...... .. ......+..+.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 000000000 00 0001223678899999999999999999999863
No 225
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.7e-40 Score=333.43 Aligned_cols=264 Identities=23% Similarity=0.326 Sum_probs=199.9
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEE--CCCCEEEEEEcccCCCC-CcHHHHHHHHHHHhhc---cCCCccceEEEEe----
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYL--QDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLA---VHRNLLRLIGFCM---- 294 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 294 (549)
+.++|++.+.||+|+||.||+|.. .+|+.||+|+++..... .....+.+|+.+++.+ .||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 35889999998743321 1223466777777666 8999999999987
Q ss_pred -cCCceeeEeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeec
Q 008893 295 -TTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDF 371 (549)
Q Consensus 295 -~~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 371 (549)
.....++||||+. |+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999998 6999998753 3599999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh--
Q 008893 372 GLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ-- 449 (549)
Q Consensus 372 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 449 (549)
|+++..... .......||..|+|||.+.+..++.++||||||+++|||+||+.||........ +.........
T Consensus 165 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~ 239 (326)
T 1blx_A 165 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ---LGKILDVIGLPG 239 (326)
T ss_dssp CSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCC
T ss_pred cccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHHHcCCCC
Confidence 999865422 122345689999999999999999999999999999999999999975432211 1111111100
Q ss_pred -ccchhh------hcc---ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 450 -EKKLEM------LVD---KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 450 -~~~~~~------~~d---~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...... ... ......+....+..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 000 000011112234678899999999999999999999863
No 226
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=9e-40 Score=324.91 Aligned_cols=250 Identities=20% Similarity=0.299 Sum_probs=197.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCC---CCCcHHHHHHHHHHHhhccCCCccceEEEEe--cCCce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN---AIGGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTER 299 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 299 (549)
.++|.+.+.||+|+||.||+|... +++.||+|+++... .......+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 368999999999999999999975 68899999997532 1234567999999999999999999999984 44578
Q ss_pred eeEeeccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeeccccccc
Q 008893 300 LLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 377 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 377 (549)
++||||++++ |.+.+.. ...+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 6666643 45699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-ceeeccccccCccCchhhccCCC--CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchh
Q 008893 378 DHCDS-HVTTAVRGTVGHIAPEYLSTGQS--SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 454 (549)
Q Consensus 378 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~--~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (549)
..... .......||+.|+|||.+.+... +.++||||||+++|||++|+.||..... ......+....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~~--- 229 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-------YKLFENIGKGS--- 229 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCC---
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-------HHHHHHHhcCC---
Confidence 53222 22334569999999999976543 7799999999999999999999974321 11111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 455 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 455 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
..+ +......+.+++.+|++.||++|||+.|++++
T Consensus 230 ----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 ----YAI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CCC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011 11223678899999999999999999999974
No 227
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.5e-40 Score=330.08 Aligned_cols=256 Identities=19% Similarity=0.262 Sum_probs=201.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEE-C-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCC------ccceEEEEecCCc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYL-Q-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN------LLRLIGFCMTTTE 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~-~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 298 (549)
++|++.+.||+|+||+||+|.. . +++.||||+++... .....+.+|+.++..++|++ ++++++++...+.
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 5788999999999999999987 3 58899999997432 22456889999999887765 9999999999999
Q ss_pred eeeEeeccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC--------------
Q 008893 299 RLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-------------- 362 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-------------- 362 (549)
.++||||+ +++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999987554 689999999999999999999999 9999999999999987
Q ss_pred -----CCceEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCcccccc
Q 008893 363 -----YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK 437 (549)
Q Consensus 363 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~ 437 (549)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||||+++|||+||+.||.........
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 243 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 678999999999865432 23346899999999999999999999999999999999999999754322111
Q ss_pred ccHHHHHHHHhhccc-----------------------------hhhhcccc-ccCCCCHHHHHHHHHHHHHhcccCCCC
Q 008893 438 GAMLDWVKKIHQEKK-----------------------------LEMLVDKD-LKNNYDRIELEEMVQVALLCTQYLPSL 487 (549)
Q Consensus 438 ~~~~~~~~~~~~~~~-----------------------------~~~~~d~~-l~~~~~~~~~~~l~~l~~~cl~~dP~~ 487 (549)
..+........ ......+. -...........+.+++.+||+.||++
T Consensus 244 ----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 244 ----AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp ----HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred ----HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 11111000000 00000000 001123345678999999999999999
Q ss_pred CCCHHHHHH
Q 008893 488 RPKMSEVVR 496 (549)
Q Consensus 488 RPs~~evl~ 496 (549)
|||+.|+++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999999985
No 228
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.2e-39 Score=319.40 Aligned_cols=252 Identities=24% Similarity=0.338 Sum_probs=204.1
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
..++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++......++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999976 689999999865432 33456789999999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC---CCceEEeecccccccCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~~~~~~~ 379 (549)
|||+++++|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+||+++. ++.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 99999999999987767899999999999999999999999 9999999999999975 44799999999987653
Q ss_pred CCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
.. ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+........... .+.
T Consensus 177 ~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~---~~~ 243 (287)
T 2wei_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETGKYA---FDL 243 (287)
T ss_dssp CS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCC---CCS
T ss_pred CC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCC---CCc
Confidence 32 2233458999999999865 489999999999999999999999974321 1111221111100 000
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
..... .+..+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 244 PQWRT----ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp GGGTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhh----cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00111 2367899999999999999999999987
No 229
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.7e-40 Score=331.24 Aligned_cols=253 Identities=24% Similarity=0.319 Sum_probs=178.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHH-HHhhccCCCccceEEEEecCCceeeEee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
++|...+.||+|+||.||+|... +|+.||||+++.........++..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57888999999999999999985 689999999976543333445556665 6777899999999999999999999999
Q ss_pred ccCCCchhhhhc-----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 305 YMSNGSVASRLK-----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 305 ~~~~g~L~~~l~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
|+++ +|.+++. ....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9985 7777765 2567999999999999999999999842 899999999999999999999999999986643
Q ss_pred CCCceeeccccccCccCchhh----ccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhh
Q 008893 380 CDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 455 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (549)
.. ......||+.|+|||.+ .+..++.++||||||+++|||+||+.||........ ...... .
T Consensus 179 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~------~ 244 (327)
T 3aln_A 179 SI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------QLTQVV------K 244 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCCC------C
T ss_pred cc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------HHHHHh------c
Confidence 22 22333699999999998 456789999999999999999999999974221100 000000 0
Q ss_pred hccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 456 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 456 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
-..+.+........+..+.+++.+||+.||++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00011111111123467999999999999999999999975
No 230
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=337.78 Aligned_cols=263 Identities=20% Similarity=0.261 Sum_probs=182.1
Q ss_pred CCCC-CCeeeeeCCeEEEEEEEC---CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEec--CCceee
Q 008893 228 NFSS-KNLVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT--TTERLL 301 (549)
Q Consensus 228 ~~~~-~~~iG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 301 (549)
.|++ .++||+|+||+||+|.+. +++.||||++.... ....+.+|+.+++.++||||+++++++.. ....++
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 3555 568999999999999975 47899999997543 23468899999999999999999999954 668899
Q ss_pred EeeccCCCchhhhhcc---------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee----cCCCceEE
Q 008893 302 VYPYMSNGSVASRLKA---------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVV 368 (549)
Q Consensus 302 v~e~~~~g~L~~~l~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl 368 (549)
||||+.+ +|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999974 78777641 12599999999999999999999999 99999999999999 77899999
Q ss_pred eecccccccCCCCC--ceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCcccccc------cc
Q 008893 369 GDFGLAKLLDHCDS--HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQK------GA 439 (549)
Q Consensus 369 ~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~------~~ 439 (549)
+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||......... ..
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987653222 223345699999999999874 5899999999999999999999999754321100 01
Q ss_pred HHHHHHHHhh--ccchhhh------------ccccccCCCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 440 MLDWVKKIHQ--EKKLEML------------VDKDLKNNYDR---------IELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 440 ~~~~~~~~~~--~~~~~~~------------~d~~l~~~~~~---------~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
+...+..... ......+ +.......... .....+.+|+.+||+.||++|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111110000 0000000 00000000000 01356889999999999999999999997
Q ss_pred H
Q 008893 497 M 497 (549)
Q Consensus 497 ~ 497 (549)
+
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 4
No 231
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=332.08 Aligned_cols=256 Identities=23% Similarity=0.374 Sum_probs=199.4
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCC-CCcHHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
...++|++.+.||+|+||.||+|...+ .||+|+++.... ......+.+|+.+++.++||||+++++++......++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345688999999999999999999864 499999875432 22234577899999999999999999999999999999
Q ss_pred eeccCCCchhhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCC
Q 008893 303 YPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 381 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 381 (549)
|||+++++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 99999999999998644 799999999999999999999999 999999999999998 6799999999987653211
Q ss_pred C----ceeeccccccCccCchhhcc---------CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHh
Q 008893 382 S----HVTTAVRGTVGHIAPEYLST---------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 448 (549)
Q Consensus 382 ~----~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 448 (549)
. .......||+.|+|||.+.. ..++.++||||||+++|||+||+.||...... .......
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~ 256 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-------AIIWQMG 256 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-------HHHHHHH
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHhc
Confidence 1 12233458999999999864 35788999999999999999999999643211 1111111
Q ss_pred hccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 008893 449 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 501 (549)
Q Consensus 449 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 501 (549)
.. . .+.... ...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 257 ~~-~-----~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l 300 (319)
T 2y4i_B 257 TG-M-----KPNLSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300 (319)
T ss_dssp TT-C-----CCCCCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC
T ss_pred cC-C-----CCCCCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11 0 111100 01225688999999999999999999999999974
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.5e-39 Score=330.89 Aligned_cols=258 Identities=19% Similarity=0.255 Sum_probs=195.3
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCce-----
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER----- 299 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~----- 299 (549)
++|...+.||+|+||.||+|... +|+.||||++....... ....+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 57888999999999999999975 68999999997643222 234688999999999999999999999877654
Q ss_pred -eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 300 -LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 300 -~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
++||||+. ++|.+.+.. .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 588887754 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhc--cc---
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--KK--- 452 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~--- 452 (549)
.. .....||+.|+|||.+.+ ..++.++|||||||++|+|+||+.||........ +.......... ..
T Consensus 196 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 196 AE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCHHHHTT
T ss_pred cC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCcHHHHHH
Confidence 32 234568999999999987 6789999999999999999999999975332111 11111100000 00
Q ss_pred -----hhhh---ccccccCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 453 -----LEML---VDKDLKNN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 453 -----~~~~---~d~~l~~~---~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.... ........ ........+.+++.+||+.||++|||+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 00000000 001124678999999999999999999999864
No 233
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6.1e-39 Score=329.45 Aligned_cols=200 Identities=25% Similarity=0.311 Sum_probs=169.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-CC-----CccceEEEEecCC
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HR-----NLLRLIGFCMTTT 297 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~ 297 (549)
..++|.+.+.||+|+||+||+|... +++.||||+++... .....+..|+.++..++ |+ +++++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3578999999999999999999976 58899999997432 22345778888888775 44 4999999999999
Q ss_pred ceeeEeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec--CCCceEEeeccc
Q 008893 298 ERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD--EYYEAVVGDFGL 373 (549)
Q Consensus 298 ~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~Dfg~ 373 (549)
..++||||+. |+|.+++... ..+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 5999998754 4699999999999999999999952 22899999999999994 578899999999
Q ss_pred ccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCc
Q 008893 374 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGK 432 (549)
Q Consensus 374 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~ 432 (549)
++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 208 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 208 SCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9876432 233568999999999999999999999999999999999999997543
No 234
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=328.34 Aligned_cols=245 Identities=24% Similarity=0.362 Sum_probs=193.4
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-----cHHHHHHHHHHHhhc----cCCCccceEEE
Q 008893 223 QSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLA----VHRNLLRLIGF 292 (549)
Q Consensus 223 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l----~h~niv~l~~~ 292 (549)
+...++|.+.+.||+|+||.||+|... +++.||||++....... ....+..|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344578999999999999999999864 68999999997543221 122356788898888 89999999999
Q ss_pred EecCCceeeEeec-cCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec-CCCceEEee
Q 008893 293 CMTTTERLLVYPY-MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGD 370 (549)
Q Consensus 293 ~~~~~~~~lv~e~-~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~D 370 (549)
+...+..++|+|| +.+++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+||+++ +++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 78999999998777899999999999999999999999 999999999999999 889999999
Q ss_pred cccccccCCCCCceeeccccccCccCchhhccCCCC-CcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh
Q 008893 371 FGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 449 (549)
Q Consensus 371 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 449 (549)
||+++...... .....||..|+|||.+.+..+. .++||||||+++|||++|+.||.... . ...
T Consensus 184 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------~----~~~ 247 (312)
T 2iwi_A 184 FGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------E----ILE 247 (312)
T ss_dssp CSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------H----HHH
T ss_pred cchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---------H----Hhh
Confidence 99998765322 2345589999999999877764 58999999999999999999986311 0 000
Q ss_pred ccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 450 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 450 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.. ..++......+.+++.+||+.||++|||+.|++++
T Consensus 248 ---------~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 ---------AE--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ---------TC--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---------hc--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 01112233678999999999999999999999874
No 235
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.4e-39 Score=319.98 Aligned_cols=251 Identities=25% Similarity=0.394 Sum_probs=192.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEec---------
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT--------- 295 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 295 (549)
.++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 457889999999999999999975 68999999996432 234568899999999999999999998865
Q ss_pred ----CCceeeEeeccCCCchhhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEee
Q 008893 296 ----TTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 370 (549)
Q Consensus 296 ----~~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 370 (549)
....++||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 3467899999999999999974 34688899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCC-------------CceeeccccccCccCchhhccC-CCCCcccchhHhHHHHHHHhCCcccccCccccc
Q 008893 371 FGLAKLLDHCD-------------SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQ 436 (549)
Q Consensus 371 fg~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~ 436 (549)
||++....... ........||+.|+|||.+.+. .++.++||||||+++|||++ ||....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---- 232 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---- 232 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH----
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch----
Confidence 99998664321 1122344689999999999764 68999999999999999998 443111
Q ss_pred cccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 437 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
............ .......++...+..+.+++.+||+.||++|||+.|++++
T Consensus 233 --~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 --ERVNILKKLRSV-------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp --HHHHHHHHHHST-------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --hHHHHHHhcccc-------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 011111111110 1111122333344678999999999999999999999873
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=325.23 Aligned_cols=257 Identities=20% Similarity=0.269 Sum_probs=196.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-cHHHHHHHHHHHhhccCCCccceEEEEecCCc------
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE------ 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 298 (549)
++|...+.||+|+||.||+|... +|+.||||++....... ....+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888999999999999999975 68999999997643222 23468899999999999999999999987654
Q ss_pred eeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccC
Q 008893 299 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
.++||||+. ++|.+.+.. .+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 588888754 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhh--ccc---
Q 008893 379 HCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ--EKK--- 452 (549)
Q Consensus 379 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~--- 452 (549)
.. .....||+.|+|||.+.+ ..++.++||||||+++|||+||+.||........ +......... ...
T Consensus 178 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 178 AE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHTT
T ss_pred CC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHH
Confidence 22 233468999999999877 6789999999999999999999999975432111 1111110000 000
Q ss_pred ---------hhhhc---cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 453 ---------LEMLV---DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 453 ---------~~~~~---d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...+. ...+ .......+..+.+++.+|++.||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 0000 11112335779999999999999999999999863
No 237
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.1e-40 Score=332.02 Aligned_cols=243 Identities=23% Similarity=0.355 Sum_probs=200.5
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC-----cHHHHHHHHHHHhhcc--CCCccceEEEEecC
Q 008893 225 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAV--HRNLLRLIGFCMTT 296 (549)
Q Consensus 225 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~ 296 (549)
..++|.+.+.||+|+||.||+|... +++.||||++....... ....+..|+.+++.++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 4567899999999999999999964 68999999997543221 1234678999999996 59999999999999
Q ss_pred CceeeEeeccCC-CchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec-CCCceEEeecccc
Q 008893 297 TERLLVYPYMSN-GSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLA 374 (549)
Q Consensus 297 ~~~~lv~e~~~~-g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~~ 374 (549)
+..++|+||+.+ ++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++ +++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999976 89999998777899999999999999999999999 999999999999999 7899999999999
Q ss_pred cccCCCCCceeeccccccCccCchhhccCCC-CCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccch
Q 008893 375 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 453 (549)
Q Consensus 375 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (549)
+..... ......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||..... .....
T Consensus 198 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------------~~~~~-- 259 (320)
T 3a99_A 198 ALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------------IIRGQ-- 259 (320)
T ss_dssp EECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHHCC--
T ss_pred cccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------------hhccc--
Confidence 876532 2234469999999999987765 6789999999999999999999863210 00000
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 454 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 454 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
......+ +..+.+++.+||+.||++|||++|++++
T Consensus 260 -----~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 -----VFFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp -----CCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----ccccccC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011122 3678999999999999999999999874
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.4e-39 Score=326.50 Aligned_cols=250 Identities=19% Similarity=0.241 Sum_probs=172.5
Q ss_pred hcCCCCC-CeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEec----CCce
Q 008893 226 TSNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTER 299 (549)
Q Consensus 226 ~~~~~~~-~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 299 (549)
.++|.+. +.||+|+||+||+|... +|+.||||++.... ....+....+..+.||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4577774 46999999999999976 68999999986432 222233334567789999999999875 3457
Q ss_pred eeEeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC---CCceEEeecccc
Q 008893 300 LLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 374 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~~ 374 (549)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 9999999999999999754 3699999999999999999999999 9999999999999975 456999999999
Q ss_pred cccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchh
Q 008893 375 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 454 (549)
Q Consensus 375 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (549)
+..... ......||+.|+|||.+.+..++.++||||||+++|+|+||+.||................ . ..
T Consensus 179 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~---~-~~--- 248 (336)
T 3fhr_A 179 KETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI---R-LG--- 248 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhh---h-cc---
Confidence 865432 2234468999999999988889999999999999999999999997533221110000000 0 00
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 455 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 455 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
............+..+.+++.+||+.||++|||+.|+++
T Consensus 249 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 ---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000000011123467899999999999999999999997
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.7e-39 Score=337.36 Aligned_cols=249 Identities=24% Similarity=0.272 Sum_probs=187.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeEeecc
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVYPYM 306 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 306 (549)
.|...+.||+|+||+||.+...+|+.||||++.... ...+.+|+.++..+ +||||+++++++......++||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 344568899999999987777789999999986532 34678899999876 8999999999999999999999999
Q ss_pred CCCchhhhhccCCCC-------CHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCC-------------Cce
Q 008893 307 SNGSVASRLKAKPSL-------DWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-------------YEA 366 (549)
Q Consensus 307 ~~g~L~~~l~~~~~l-------~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-------------~~~ 366 (549)
. |+|.+++...... ++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 6999999754322 3334578999999999999999 99999999999999754 489
Q ss_pred EEeecccccccCCCCCc---eeeccccccCccCchhhcc-------CCCCCcccchhHhHHHHHHHh-CCcccccCcccc
Q 008893 367 VVGDFGLAKLLDHCDSH---VTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELIS-GLRALEFGKTAN 435 (549)
Q Consensus 367 kl~Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~ 435 (549)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999877643322 1234569999999999975 568999999999999999999 999986422110
Q ss_pred ccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 436 QKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
...... .... +..........+.++.+++.+||+.||++|||+.|++++
T Consensus 248 -----~~i~~~---~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 -----SNIIRG---IFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -----HHHHHT---CCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----HHHhcC---CCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 111110 0000 111112245567889999999999999999999999863
No 240
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=322.76 Aligned_cols=261 Identities=22% Similarity=0.282 Sum_probs=191.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEe-----------
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM----------- 294 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----------- 294 (549)
++|.+.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.+++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 57888999999999999999986 48999999987543 233456889999999999999999999874
Q ss_pred ---cCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec-CCCceEEee
Q 008893 295 ---TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGD 370 (549)
Q Consensus 295 ---~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~D 370 (549)
.....++||||++ |+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++ +++.+||+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3457799999998 699999875 4689999999999999999999999 999999999999997 667999999
Q ss_pred cccccccCCCCCc--eeeccccccCccCchhhcc-CCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHH
Q 008893 371 FGLAKLLDHCDSH--VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 447 (549)
Q Consensus 371 fg~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 447 (549)
||+++........ ......+|..|+|||.+.+ ..++.++||||||+++|||+||+.||........ ........
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~ 241 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ---MQLILESI 241 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHS
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhc
Confidence 9999876432211 2233457899999998865 6789999999999999999999999975432111 11111000
Q ss_pred hh--ccchhh-------hcccccc-CC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 448 HQ--EKKLEM-------LVDKDLK-NN-----YDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 448 ~~--~~~~~~-------~~d~~l~-~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
.. .....+ ....... .. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00 000000 0000000 00 00112467899999999999999999999986
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.6e-39 Score=329.14 Aligned_cols=261 Identities=20% Similarity=0.267 Sum_probs=197.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-----------CCCccceEEEEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-----------HRNLLRLIGFCM 294 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~ 294 (549)
++|.+.+.||+|+||+||+|... +++.||||++.... .....+.+|+.++..+. ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 57889999999999999999974 68999999997432 22446888999988876 899999999987
Q ss_pred cCC----ceeeEeeccCCCchhhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec------C
Q 008893 295 TTT----ERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD------E 362 (549)
Q Consensus 295 ~~~----~~~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~------~ 362 (549)
... ..+++|||+ +++|.+++.. ...+++..+..++.||+.||.|||+++ +|+||||||+|||++ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 644 689999999 8899999874 345999999999999999999999843 899999999999994 4
Q ss_pred CCceEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccc---c
Q 008893 363 YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG---A 439 (549)
Q Consensus 363 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~---~ 439 (549)
.+.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||.......... .
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 458999999999876432 233468999999999999999999999999999999999999997543221111 1
Q ss_pred HHHHHHHHhh--------ccchhhhccc-------------------cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 008893 440 MLDWVKKIHQ--------EKKLEMLVDK-------------------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS 492 (549)
Q Consensus 440 ~~~~~~~~~~--------~~~~~~~~d~-------------------~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 492 (549)
+......... .......+.. .-...++......+.+++.+||+.||++|||+.
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 1111110000 0000000000 001234567788999999999999999999999
Q ss_pred HHHH
Q 008893 493 EVVR 496 (549)
Q Consensus 493 evl~ 496 (549)
|+++
T Consensus 330 ell~ 333 (373)
T 1q8y_A 330 GLVN 333 (373)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9986
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.5e-39 Score=326.00 Aligned_cols=256 Identities=18% Similarity=0.257 Sum_probs=197.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CC-CEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCC------ccceEEEEecCCc
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DG-TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN------LLRLIGFCMTTTE 298 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 298 (549)
++|.+.+.||+|+||+||+|... ++ +.||+|+++... .....+..|+.+++.++|++ ++.+.+++.....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 57889999999999999999975 34 689999997432 23456888999999998766 8999999999999
Q ss_pred eeeEeeccCCCchhhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeee----------------
Q 008893 299 RLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---------------- 360 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---------------- 360 (549)
.++||||+ ++++.+.+... ..+++..+..++.||+.||.|||+. +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 55666666533 4699999999999999999999999 99999999999999
Q ss_pred ---cCCCceEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCcccccc
Q 008893 361 ---DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK 437 (549)
Q Consensus 361 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~ 437 (549)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||........
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~- 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH- 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred ccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 67889999999999865432 2334699999999999999999999999999999999999999975332111
Q ss_pred ccHHHHHHHHhhcc---------chhhhcc--------------------c-cccCCCCHHHHHHHHHHHHHhcccCCCC
Q 008893 438 GAMLDWVKKIHQEK---------KLEMLVD--------------------K-DLKNNYDRIELEEMVQVALLCTQYLPSL 487 (549)
Q Consensus 438 ~~~~~~~~~~~~~~---------~~~~~~d--------------------~-~l~~~~~~~~~~~l~~l~~~cl~~dP~~ 487 (549)
...+....... ....... + .............+.+++.+||+.||++
T Consensus 248 ---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 248 ---LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp ---HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred ---HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 11111110000 0000000 0 0000112334568999999999999999
Q ss_pred CCCHHHHHH
Q 008893 488 RPKMSEVVR 496 (549)
Q Consensus 488 RPs~~evl~ 496 (549)
|||+.|+++
T Consensus 325 Rpt~~e~l~ 333 (355)
T 2eu9_A 325 RITLAEALL 333 (355)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999999975
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=318.56 Aligned_cols=250 Identities=23% Similarity=0.320 Sum_probs=179.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHH-HHHHHHHHhhccCCCccceEEEEecCCceeeEee
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~-~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 304 (549)
++|+..+.||+|+||.||+|... +|+.||||++..........+ +.++..+++.++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 56888899999999999999986 689999999976543222233 4445556788899999999999999999999999
Q ss_pred ccCCCchhhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 305 YMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 305 ~~~~g~L~~~l~-~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|+ ++.+..+.. ....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (318)
T 2dyl_A 105 LM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179 (318)
T ss_dssp CC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-
Confidence 99 445555443 25679999999999999999999998 5 89999999999999999999999999997654322
Q ss_pred ceeeccccccCccCchhhc-----cCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhc
Q 008893 383 HVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 457 (549)
Q Consensus 383 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (549)
......||+.|+|||.+. ...++.++||||||+++|||+||+.||...... ............
T Consensus 180 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~----- 247 (318)
T 2dyl_A 180 -AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVLTKVLQEEP----- 247 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHHSCC-----
T ss_pred -cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHHHHHhccCC-----
Confidence 223446899999999994 456889999999999999999999999742211 111111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 458 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 458 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
+.+.. ....+..+.+++.+||+.||.+||++.|+++
T Consensus 248 -~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 -PLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -CCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -CCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00000 0112367899999999999999999999986
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.6e-39 Score=349.12 Aligned_cols=259 Identities=24% Similarity=0.333 Sum_probs=199.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEec------CCc
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT------TTE 298 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 298 (549)
.++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|+.+++.++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999975 6899999999765443445578999999999999999999999765 667
Q ss_pred eeeEeeccCCCchhhhhccCC---CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCc---eEEeecc
Q 008893 299 RLLVYPYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFG 372 (549)
Q Consensus 299 ~~lv~e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg 372 (549)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999997543 699999999999999999999999 9999999999999997664 9999999
Q ss_pred cccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccc
Q 008893 373 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 452 (549)
Q Consensus 373 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (549)
++....... ......||+.|+|||.+.+..++.++||||||+++|+|+||+.||...... ..|.........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~------~~~~~~i~~~~~ 241 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP------VQWHGKVREKSN 241 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH------HHSSTTCC----
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch------hhhhhhhhcccc
Confidence 998765432 233456999999999999999999999999999999999999999753211 111111100000
Q ss_pred hhhhccc------------cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 008893 453 LEMLVDK------------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 495 (549)
Q Consensus 453 ~~~~~d~------------~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 495 (549)
....... ..........+..+.+++.+|++.||++|||+.|++
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 0000000 011223445678899999999999999999997743
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=329.06 Aligned_cols=248 Identities=23% Similarity=0.283 Sum_probs=187.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeEeec
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 305 (549)
.+|...+.||+|+||+||.....+|+.||||++...... .+.+|+.+++.+ +||||+++++++.+....++||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 457788999999999976665667999999999654321 246899999998 799999999999999999999999
Q ss_pred cCCCchhhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC-----CCceEEeecccccccCC
Q 008893 306 MSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-----YYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 306 ~~~g~L~~~l~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-----~~~~kl~Dfg~~~~~~~ 379 (549)
+. |+|.+++.... ...+..+..++.||+.||.|||+. +|+||||||+|||++. ...+||+|||+++....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 96 59999987543 456667789999999999999999 9999999999999942 34688999999987653
Q ss_pred CCC--ceeeccccccCccCchhhc---cCCCCCcccchhHhHHHHHHHh-CCcccccCccccccccHHHHHHHHhhccch
Q 008893 380 CDS--HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKL 453 (549)
Q Consensus 380 ~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (549)
... .......||+.|+|||++. ...++.++|||||||++|||+| |..||...... ...........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~~ 247 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--------QANILLGACSL 247 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--------HHHHHTTCCCC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--------HHHHHhccCCc
Confidence 322 1234456999999999997 4567889999999999999999 88888532111 01111111100
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 454 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 454 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.. ..........+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 DC-------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TT-------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cc-------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 00 01122344568899999999999999999999853
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-38 Score=347.16 Aligned_cols=238 Identities=21% Similarity=0.286 Sum_probs=191.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC--CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCccceEEEEecCCc-----e
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ--DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE-----R 299 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~ 299 (549)
++|.+.+.||+|+||+||+|... +|+.||||++...........+.+|+.++..++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57889999999999999999975 5899999999754433344568899999999999999999999987665 6
Q ss_pred eeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCC
Q 008893 300 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 379 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 379 (549)
++||||+++++|.+++.. .+++..+..++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999999988765 699999999999999999999999 99999999999999985 999999999987653
Q ss_pred CCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccc
Q 008893 380 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 459 (549)
Q Consensus 380 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 459 (549)
. ....||+.|+|||++.+.. +.++|||||||++|+|++|..|+........ ..
T Consensus 234 ~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------------------~~- 286 (681)
T 2pzi_A 234 F-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------------------PE- 286 (681)
T ss_dssp C-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------------CT-
T ss_pred C-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc--------------------cc-
Confidence 2 3346999999999987754 8899999999999999999888763211100 00
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCH-HHHHHHHhc
Q 008893 460 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKM-SEVVRMLEG 500 (549)
Q Consensus 460 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-~evl~~L~~ 500 (549)
..........+.+++.+||+.||++||+. +++...|.+
T Consensus 287 ---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 287 ---DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ---TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ---cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00001123578899999999999999964 455555543
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.1e-37 Score=302.78 Aligned_cols=229 Identities=12% Similarity=0.053 Sum_probs=181.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCc--HHHHHHHHHHHhhccCCCccceEEEEecCCceeeEe
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGG--EIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 303 (549)
++|.+.+.||+|+||.||+|... +|+.||||++........ ...+.+|+..+..++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888999999999999999976 489999999986543222 256899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||+++++|.+++..+ ....+...++.|++.||.|||+. +|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 999999999999654 35567889999999999999999 99999999999999999999997443
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccC
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 463 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 463 (549)
|++ .++.++|||||||++|||+||+.||............ .......... ..
T Consensus 175 ----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---------~~~~~~~~~~--~~ 226 (286)
T 3uqc_A 175 ----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---------ERDTAGQPIE--PA 226 (286)
T ss_dssp ----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---------CBCTTSCBCC--HH
T ss_pred ----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---------HHHhccCCCC--hh
Confidence 333 3678999999999999999999999864432210000 0000000000 00
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 008893 464 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 500 (549)
Q Consensus 464 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 500 (549)
......+..+.+++.+||+.||++| |+.|+++.|+.
T Consensus 227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~ 262 (286)
T 3uqc_A 227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQ 262 (286)
T ss_dssp HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence 0011123678999999999999999 99999999987
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=9.1e-38 Score=315.03 Aligned_cols=245 Identities=13% Similarity=0.147 Sum_probs=187.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCC-------CCcHHHHHHHHHHHhhcc---------CCCccce
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAV---------HRNLLRL 289 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~---------h~niv~l 289 (549)
.++|++.+.||+|+||+||+|+. +|+.||||+++.... ......+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35678899999999999999998 689999999975532 223367889999988886 8888887
Q ss_pred EEEEe------------------------------cCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 008893 290 IGFCM------------------------------TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 339 (549)
Q Consensus 290 ~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~ 339 (549)
.+++. .....++||||+++|++.+.+.. ..+++..+..++.||+.||.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Confidence 77643 26789999999999987777754 468999999999999999999
Q ss_pred hh-hcCCCceEecccCcCeeeecCCC--------------------ceEEeecccccccCCCCCceeeccccccCccCch
Q 008893 340 LH-EQCDPKIIHRDVKAANILLDEYY--------------------EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE 398 (549)
Q Consensus 340 LH-~~~~~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE 398 (549)
|| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE 247 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDED 247 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSG
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChh
Confidence 99 88 999999999999999887 9999999999876532 236999999999
Q ss_pred hhccCCCCCcccchhHhHH-HHHHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHH
Q 008893 399 YLSTGQSSEKTDVFGFGIL-LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVA 477 (549)
Q Consensus 399 ~~~~~~~~~~~Dv~s~G~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~ 477 (549)
++.+.. +.++||||+|++ .+++++|..||.. ..|.........-................+.++.+++
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN----------VLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH----------HHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcc----------hhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHH
Confidence 998766 889999998776 7888899988852 1121111100000000011111112345678899999
Q ss_pred HHhcccCCCCCCCHHHHH-HH
Q 008893 478 LLCTQYLPSLRPKMSEVV-RM 497 (549)
Q Consensus 478 ~~cl~~dP~~RPs~~evl-~~ 497 (549)
.+||+.| |++|++ ++
T Consensus 317 ~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 317 RTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHGGGSS-----SHHHHHHHC
T ss_pred HHHhccC-----CHHHHHhcC
Confidence 9999976 899888 53
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.9e-36 Score=300.20 Aligned_cols=225 Identities=19% Similarity=0.270 Sum_probs=176.6
Q ss_pred cCCCCC-CeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHH-hhccCCCccceEEEEec----CCce
Q 008893 227 SNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMI-SLAVHRNLLRLIGFCMT----TTER 299 (549)
Q Consensus 227 ~~~~~~-~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~ 299 (549)
++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456665 78999999999999974 6899999998642 3567888887 56689999999999876 6678
Q ss_pred eeEeeccCCCchhhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC---CCceEEeecccc
Q 008893 300 LLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 374 (549)
Q Consensus 300 ~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~~ 374 (549)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999997543 699999999999999999999999 9999999999999998 789999999998
Q ss_pred cccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccccCccccccccHHHHHHHHhhccchh
Q 008893 375 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 454 (549)
Q Consensus 375 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (549)
.... +..++.++|||||||++|||+||+.||.......... ....
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~------------~~~~ 212 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP------------GMKT 212 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C------------CSCC
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH------------HHHH
Confidence 7543 1335678999999999999999999996432211100 0000
Q ss_pred hhccccccCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008893 455 MLVDKDLKNNYD----RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 497 (549)
Q Consensus 455 ~~~d~~l~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 497 (549)
.+.... ...+ ...+..+.+++.+||+.||++|||+.|++++
T Consensus 213 ~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 213 RIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000 0111 1124678999999999999999999999863
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-37 Score=320.37 Aligned_cols=239 Identities=15% Similarity=0.117 Sum_probs=179.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCCCC--cHHHHHHHHHHHhhccC-CCc---------cceEEE-
Q 008893 227 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVH-RNL---------LRLIGF- 292 (549)
Q Consensus 227 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h-~ni---------v~l~~~- 292 (549)
..|...+.||+|+||+||+|.+. +|+.||||+++...... ....+.+|+.++..++| +|. +.....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45667789999999999999965 69999999987433222 24578999999998877 221 111111
Q ss_pred -----------Eec-----CCceeeEeeccCCCchhhhhc-------cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceE
Q 008893 293 -----------CMT-----TTERLLVYPYMSNGSVASRLK-------AKPSLDWATRKRIALGAARGLLYLHEQCDPKII 349 (549)
Q Consensus 293 -----------~~~-----~~~~~lv~e~~~~g~L~~~l~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 349 (549)
+.. ....+++|+++ +++|.+++. ....+++..+..++.||+.||.|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111 12345666665 679998884 133578899999999999999999999 999
Q ss_pred ecccCcCeeeecCCCceEEeecccccccCCCCCceeeccccccCccCchhh----------ccCCCCCcccchhHhHHHH
Q 008893 350 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL----------STGQSSEKTDVFGFGILLL 419 (549)
Q Consensus 350 H~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~s~G~il~ 419 (549)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998865422 344567 999999999 5556888999999999999
Q ss_pred HHHhCCcccccCccccccccHHHHHHHHhhccchhhhccccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008893 420 ELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 496 (549)
Q Consensus 420 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 496 (549)
||+||+.||......... ..++... ..+ +..+.+++.+||+.||++||++.|+++
T Consensus 309 elltg~~Pf~~~~~~~~~----------------~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGGS----------------EWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGSCS----------------GGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhhhH----------------HHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999753322111 1111110 122 267999999999999999999998875
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.2e-30 Score=279.73 Aligned_cols=186 Identities=15% Similarity=0.053 Sum_probs=132.8
Q ss_pred eeeeCCeEEEEEEE-CCCCEEEEEEcccCCCC---------CcHHHHHHHHHHHhhc-cCCCccceEEEEecCCceeeEe
Q 008893 235 VGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAI---------GGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 235 iG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 303 (549)
.+.|++|.+..++. --|+.+++|++...... ...++|.+|+++|+++ .|+||+++++++.++...||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 45566665555442 24888999999754211 1123599999999999 7999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCc
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 383 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 383 (549)
||++|++|.+++...++++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+++...... .
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~-~ 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC-S 394 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC----C
T ss_pred ecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC-c
Confidence 999999999999988888765 4889999999999999 99999999999999999999999999998765432 2
Q ss_pred eeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCccc
Q 008893 384 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRAL 428 (549)
Q Consensus 384 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~ 428 (549)
.....+||+.|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3345679999999999865 4677899999999999887776554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=3.4e-27 Score=251.56 Aligned_cols=185 Identities=16% Similarity=0.190 Sum_probs=145.6
Q ss_pred CCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCc-------HHHHHHHHHHHhhccCCCccceEEEEecCCceeeE
Q 008893 230 SSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGG-------EIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 230 ~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 302 (549)
...+.||+|+||+||+|.. .++.+++|+......... .+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 478889998754322111 23479999999999999999777777778888999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCC
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 382 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 382 (549)
|||+++++|.+++.. +..++.|++.||.|||++ +|+||||||+|||+++ .+||+|||+++.......
T Consensus 418 mE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 418 MSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 999999999999976 568999999999999999 9999999999999999 999999999998754322
Q ss_pred ce------eeccccccCccCchhhcc--CCCCCcccchhHhHHHHHHHhCCccc
Q 008893 383 HV------TTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRAL 428 (549)
Q Consensus 383 ~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~ 428 (549)
.. .....||+.|+|||++.. ..|+..+|+||..+-..+-+.++.++
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 11 135579999999999976 56788899999998888888776554
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=3.4e-24 Score=209.63 Aligned_cols=154 Identities=14% Similarity=0.077 Sum_probs=122.5
Q ss_pred HHHHHHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-----------------CcHHHHHHHHHHHhhcc
Q 008893 220 KELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-----------------GGEIQFQTEVEMISLAV 282 (549)
Q Consensus 220 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----------------~~~~~~~~e~~~l~~l~ 282 (549)
..+......|.+.+.||+|+||.||+|...+|+.||||+++..... .....+.+|+.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3444455667778999999999999999977999999999643211 02346889999999998
Q ss_pred CCCccceEEEEecCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecC
Q 008893 283 HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE 362 (549)
Q Consensus 283 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 362 (549)
| +++.+++.. +..++||||+++++|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS- 227 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-
Confidence 4 666665433 56799999999999998 432 23457999999999999999 999999999999999
Q ss_pred CCceEEeecccccccCCCCCceeeccccccCccCchhhcc
Q 008893 363 YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 402 (549)
Q Consensus 363 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 402 (549)
++.+||+|||+++ .+..|.|||++..
T Consensus 228 ~~~vkl~DFG~a~--------------~~~~~~a~e~l~r 253 (282)
T 1zar_A 228 EEGIWIIDFPQSV--------------EVGEEGWREILER 253 (282)
T ss_dssp TTEEEECCCTTCE--------------ETTSTTHHHHHHH
T ss_pred CCcEEEEECCCCe--------------ECCCCCHHHHHHH
Confidence 9999999999986 3445789998743
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=1.1e-19 Score=175.46 Aligned_cols=138 Identities=17% Similarity=0.162 Sum_probs=107.5
Q ss_pred CCCCCeeeeeCCeEEEEEEE-CCCCE--EEEEEcccCCCCC-----------------------cHHHHHHHHHHHhhcc
Q 008893 229 FSSKNLVGKGGFGNVYKGYL-QDGTV--VAVKRLKDGNAIG-----------------------GEIQFQTEVEMISLAV 282 (549)
Q Consensus 229 ~~~~~~iG~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~ 282 (549)
|.+.+.||+|+||.||+|.. .+|+. ||||+++...... ....+.+|+..+..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998 67888 9999975432110 0125788999999999
Q ss_pred CCCc--cceEEEEecCCceeeEeeccCC-C----chhhhhccCCCCCHHHHHHHHHHHHHHHHHhh-hcCCCceEecccC
Q 008893 283 HRNL--LRLIGFCMTTTERLLVYPYMSN-G----SVASRLKAKPSLDWATRKRIALGAARGLLYLH-EQCDPKIIHRDVK 354 (549)
Q Consensus 283 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlk 354 (549)
|+++ ..++++ ...++||||+.+ | +|.+.... .++.....++.|++.||.||| +. +|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEA---ELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCC
Confidence 8864 344432 367899999942 4 55554432 235577899999999999999 88 99999999
Q ss_pred cCeeeecCCCceEEeecccccccC
Q 008893 355 AANILLDEYYEAVVGDFGLAKLLD 378 (549)
Q Consensus 355 p~Nill~~~~~~kl~Dfg~~~~~~ 378 (549)
|+|||+++ .++|+|||++....
T Consensus 199 p~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEETT
T ss_pred HHHEEEcC--cEEEEECcccccCC
Confidence 99999998 99999999997653
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.69 E-value=1.3e-17 Score=167.26 Aligned_cols=142 Identities=13% Similarity=0.106 Sum_probs=101.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCC-------------CcHHH--------HHHHHHHHhhccCC
Q 008893 226 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-------------GGEIQ--------FQTEVEMISLAVHR 284 (549)
Q Consensus 226 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-------------~~~~~--------~~~e~~~l~~l~h~ 284 (549)
..-|.+.+.||+|+||.||+|...+|+.||||+++..... ..... ...|...|.++.+.
T Consensus 94 g~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 94 KDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp TSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 3448899999999999999999989999999997632110 01111 23455556666444
Q ss_pred CccceEEEEecCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCC
Q 008893 285 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY 364 (549)
Q Consensus 285 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 364 (549)
++.-..-+.. ...++||||++++.|..+... +....++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 174 gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 174 GFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp TCSCCCEEEE--ETTEEEEECCSCEEGGGCCCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred CCCCCeeeec--cCceEEEEecCCccHhhhccc------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 4322111111 234799999999888765432 23456889999999999998 999999999999998776
Q ss_pred ----------ceEEeecccccccC
Q 008893 365 ----------EAVVGDFGLAKLLD 378 (549)
Q Consensus 365 ----------~~kl~Dfg~~~~~~ 378 (549)
.+.|+||+-+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 38899999876544
No 256
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=6.6e-15 Score=135.17 Aligned_cols=104 Identities=25% Similarity=0.343 Sum_probs=93.9
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.
T Consensus 35 ~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 113 (193)
T 2wfh_A 35 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND 113 (193)
T ss_dssp EEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCC
Confidence 3679999998 788999999999999999999998888889999999999999999998888899999999999999999
Q ss_pred CCCCCCcccc-----ccccccCCccccCCC
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLICATG 131 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~~~~ 131 (549)
|++.++..+. ..+++++|++.|.+.
T Consensus 114 l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 114 ISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9988776543 578999999998753
No 257
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.56 E-value=5.4e-15 Score=135.72 Aligned_cols=106 Identities=25% Similarity=0.363 Sum_probs=94.7
Q ss_pred hhhhcccCcccccCCc-ccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccC
Q 008893 26 FGRLLQNNNISGHIPT-EIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 104 (549)
Q Consensus 26 ~~l~l~~n~l~~~~p~-~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 104 (549)
..++|++|+|++..+. .|+++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 32 ~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 111 (192)
T 1w8a_A 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111 (192)
T ss_dssp SEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCS
T ss_pred CEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 3467999999977765 589999999999999999988899999999999999999999988888899999999999999
Q ss_pred CCCCCCCCcccc-----ccccccCCccccCCC
Q 008893 105 NNLSGPVPSFHA-----KTFNITGNSLICATG 131 (549)
Q Consensus 105 N~l~~~~p~~~~-----~~~~l~~N~~~~~~~ 131 (549)
|+|++.+|..+. ..+++++|++.|.+.
T Consensus 112 N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 112 NQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999887553 568999999998753
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.55 E-value=3.9e-15 Score=166.02 Aligned_cols=110 Identities=36% Similarity=0.563 Sum_probs=99.7
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+++|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|..|..++.|+.|+|++|+
T Consensus 636 ~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~ 715 (768)
T 3rgz_A 636 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715 (768)
T ss_dssp EEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE
T ss_pred EEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccc----cccccccCCccccCCCCCCccc
Q 008893 107 LSGPVPSFH----AKTFNITGNSLICATGAEEDCF 137 (549)
Q Consensus 107 l~~~~p~~~----~~~~~l~~N~~~~~~~~~~~c~ 137 (549)
|+|.+|... .....+.||+..|+.+.. .|.
T Consensus 716 l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~ 749 (768)
T 3rgz_A 716 LSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCD 749 (768)
T ss_dssp EEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCC
T ss_pred ccccCCCchhhccCCHHHhcCCchhcCCCCc-CCC
Confidence 999999742 245678899999987543 564
No 259
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.54 E-value=1.2e-14 Score=136.45 Aligned_cols=103 Identities=28% Similarity=0.298 Sum_probs=69.0
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.|
T Consensus 61 L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 140 (220)
T 2v9t_B 61 IDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 140 (220)
T ss_dssp EECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcC
Confidence 55677777766666777777777777777777744444456677777777777777766666677777777777777777
Q ss_pred CCCCCcccc-----ccccccCCccccCC
Q 008893 108 SGPVPSFHA-----KTFNITGNSLICAT 130 (549)
Q Consensus 108 ~~~~p~~~~-----~~~~l~~N~~~~~~ 130 (549)
++..+..+. ..+++++|++.|.+
T Consensus 141 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 141 QTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 766665332 45667777777654
No 260
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.52 E-value=2.4e-14 Score=134.41 Aligned_cols=104 Identities=22% Similarity=0.240 Sum_probs=82.9
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.
T Consensus 61 ~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 140 (220)
T 2v70_A 61 KINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 140 (220)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSC
T ss_pred EEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCc
Confidence 35688888887777788888888888888888887777778888888888888888887778888888888888888888
Q ss_pred CCCCCCcccc-----ccccccCCccccCC
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLICAT 130 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~~~ 130 (549)
|++..|..+. ..+++++|++.|.+
T Consensus 141 l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 141 ITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 8887776543 45788888888764
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.49 E-value=7.6e-14 Score=131.82 Aligned_cols=81 Identities=25% Similarity=0.246 Sum_probs=44.2
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.|
T Consensus 45 L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 124 (229)
T 3e6j_A 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL 124 (229)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcc
Confidence 34555555555555555555555555555555533334445555555555555555544444455555555555555555
Q ss_pred C
Q 008893 108 S 108 (549)
Q Consensus 108 ~ 108 (549)
+
T Consensus 125 ~ 125 (229)
T 3e6j_A 125 T 125 (229)
T ss_dssp C
T ss_pred c
Confidence 5
No 262
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.47 E-value=1.4e-13 Score=124.46 Aligned_cols=104 Identities=22% Similarity=0.242 Sum_probs=90.8
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|++++..+..|+++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.
T Consensus 32 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 111 (177)
T 2o6r_A 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQ 111 (177)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCc
Confidence 46799999997777788999999999999999997666678999999999999999997777778999999999999999
Q ss_pred CCCCCCcccc-----ccccccCCccccCC
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLICAT 130 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~~~ 130 (549)
|++.++..+. ..+++++|++.|.+
T Consensus 112 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 112 LKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 9988776532 56899999998764
No 263
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.3e-13 Score=123.82 Aligned_cols=101 Identities=25% Similarity=0.258 Sum_probs=80.3
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.+++++|.|+ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 4678888887 5676653 788888888888887778888888888888888888886666677888888888888888
Q ss_pred CCCCCCcccc-----ccccccCCccccCC
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLICAT 130 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~~~ 130 (549)
|++.++..+. ..+++++|++.|.+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8887776442 56788888888765
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.46 E-value=1.6e-13 Score=131.55 Aligned_cols=100 Identities=24% Similarity=0.254 Sum_probs=61.5
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.|
T Consensus 64 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 64 LNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcC
Confidence 45666666666666666666666666666666655555566666666666666666644444556666666666666666
Q ss_pred CCCCCcccc-----ccccccCCccc
Q 008893 108 SGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 108 ~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
++.++..+. ..+++++|.+.
T Consensus 144 ~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 144 QSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CccCHHHcCcCcCCCEEECCCCcCC
Confidence 655554321 34566666554
No 265
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.1e-13 Score=122.83 Aligned_cols=101 Identities=28% Similarity=0.287 Sum_probs=84.0
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4678889886 7777664 889999999999998888889999999999999999996666667889999999999999
Q ss_pred CCCCCCcccc-----ccccccCCccccCC
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLICAT 130 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~~~ 130 (549)
|++.++..+. ..+++++|++.|.+
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred cceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9987776432 56789999998764
No 266
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.42 E-value=6.4e-14 Score=138.93 Aligned_cols=115 Identities=31% Similarity=0.540 Sum_probs=103.1
Q ss_pred eeeeeecCCc--eeehhhhcccCcccc--cCCcccCCCCCCCEEEccC-CcCCCCCcccccCCcccCeeeccCcccccCC
Q 008893 13 LIQVICSDGV--FFSFGRLLQNNNISG--HIPTEIGKLSKLLTLDLSN-NFFTGPIPSTVSHLETLQYLRLNNNSLTGAI 87 (549)
Q Consensus 13 ~~~~~c~~~~--~~~~~l~l~~n~l~~--~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 87 (549)
|.||.|+... .++..++|++|.+++ .+|..|+++++|++|+|++ |.+++.+|..|.++++|++|+|++|++++.+
T Consensus 38 w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 117 (313)
T 1ogq_A 38 WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAI 117 (313)
T ss_dssp STTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEEC
T ss_pred CcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcC
Confidence 7789997533 467788899999999 8999999999999999995 9999999999999999999999999999999
Q ss_pred CcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 88 PPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 88 p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
|..|..+++|+.|+|++|.+++.+|..+. +.+++++|.+.
T Consensus 118 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 162 (313)
T 1ogq_A 118 PDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162 (313)
T ss_dssp CGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCE
T ss_pred CHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCccc
Confidence 99999999999999999999998887553 56788898874
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.42 E-value=2.9e-13 Score=126.95 Aligned_cols=113 Identities=23% Similarity=0.234 Sum_probs=96.5
Q ss_pred eeeecCCceeeh---------hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccccc
Q 008893 15 QVICSDGVFFSF---------GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTG 85 (549)
Q Consensus 15 ~~~c~~~~~~~~---------~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 85 (549)
.+.|++..++.+ .++|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++
T Consensus 15 ~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 94 (220)
T 2v9t_B 15 IVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE 94 (220)
T ss_dssp EEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCC
T ss_pred EEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCc
Confidence 456665443333 36799999998888899999999999999999998889999999999999999999996
Q ss_pred CCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 86 AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 86 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
..+..|..+++|+.|+|++|.|++..|..+. ..+++++|.+.
T Consensus 95 l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 95 LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 6666688999999999999999999887653 56889999885
No 268
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.42 E-value=1.2e-13 Score=136.88 Aligned_cols=124 Identities=20% Similarity=0.251 Sum_probs=92.5
Q ss_pred cceeeeeeeeeecC------CceeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccC
Q 008893 7 KVLIIVLIQVICSD------GVFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 80 (549)
Q Consensus 7 ~~~~~~~~~~~c~~------~~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 80 (549)
+|+.|++.++.... +......++|++|.+++.+|..|.++++|+.|+|++|++++.+|. +..+++|+.|+|++
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~ 253 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRN 253 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCS
T ss_pred cCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcC
Confidence 55666665554431 111233456778888877788888888888888888888866554 77888888888888
Q ss_pred cccccCCCcccccCCCCceEeccCCCCCCCCCccc----cccccccCCccccCCC
Q 008893 81 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH----AKTFNITGNSLICATG 131 (549)
Q Consensus 81 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~----~~~~~l~~N~~~~~~~ 131 (549)
|+|+|.+|..|..+++|+.|+|++|+++|.+|... ...+++++|+..|+.+
T Consensus 254 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 254 NRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp SCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred CcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 88888888888888889999999999888888652 2567888888888753
No 269
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.42 E-value=6e-13 Score=123.58 Aligned_cols=102 Identities=24% Similarity=0.242 Sum_probs=48.6
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+
T Consensus 57 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 57 LYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcc
Confidence 34455555543333445555555555555555533333344555555555555555543333445555555555555555
Q ss_pred CCCCCcccc-----ccccccCCccccC
Q 008893 108 SGPVPSFHA-----KTFNITGNSLICA 129 (549)
Q Consensus 108 ~~~~p~~~~-----~~~~l~~N~~~~~ 129 (549)
++.++..+. ..+++++|++.|.
T Consensus 137 ~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 137 KSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp SCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred ceeCHHHhccCCCccEEEecCCCeecC
Confidence 544443221 3345555555443
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.41 E-value=5.3e-13 Score=129.50 Aligned_cols=123 Identities=24% Similarity=0.223 Sum_probs=76.9
Q ss_pred cccceeeeeeeeeecCCc-----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDGV-----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+++|+.|+|.++...+-. .....++|++|.|++..|..|+++++|++|+|++|++++..|..|..+++|+.|+|+
T Consensus 62 l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 141 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLA 141 (272)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECC
Confidence 456677777655443210 112235577777776666666777777777777777775555556777777777777
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
+|+|++..|..|..+++|+.|++++|.+++.++..+. +.+++++|.+.
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 142 HNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 7777755555566777777777777777766654322 44566666654
No 271
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.41 E-value=4.5e-13 Score=131.26 Aligned_cols=84 Identities=30% Similarity=0.272 Sum_probs=39.6
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|+|+ .+|..+.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 344455444 3444444445555555555555433334444445555555555554433333444444444555554444
Q ss_pred CCCCC
Q 008893 108 SGPVP 112 (549)
Q Consensus 108 ~~~~p 112 (549)
++.++
T Consensus 161 ~~l~~ 165 (290)
T 1p9a_G 161 TELPA 165 (290)
T ss_dssp SCCCT
T ss_pred CccCH
Confidence 44333
No 272
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.41 E-value=2.1e-13 Score=125.00 Aligned_cols=125 Identities=18% Similarity=0.224 Sum_probs=102.4
Q ss_pred ccceeeeeeeeeecCCc----e----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 6 EKVLIIVLIQVICSDGV----F----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~~~----~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
.+|+.|+|.++....-. + ....++|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 47788888777664311 2 223467999999999999999999999999999999988888899999999999
Q ss_pred ccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc----ccccccCCccccCC
Q 008893 78 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICAT 130 (549)
Q Consensus 78 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~----~~~~l~~N~~~~~~ 130 (549)
|++|+|++..|..|..+++|+.|+|++|++++..+-... ....+.++...|..
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCS
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCC
Confidence 999999999999999999999999999999998774321 22345566666654
No 273
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.40 E-value=5.4e-13 Score=119.71 Aligned_cols=87 Identities=26% Similarity=0.290 Sum_probs=79.9
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 34 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 113 (170)
T 3g39_A 34 VLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNP 113 (170)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCC
Confidence 37799999999889999999999999999999997777778999999999999999997777789999999999999999
Q ss_pred CCCCCCc
Q 008893 107 LSGPVPS 113 (549)
Q Consensus 107 l~~~~p~ 113 (549)
+++..+.
T Consensus 114 ~~c~c~~ 120 (170)
T 3g39_A 114 WDCACSD 120 (170)
T ss_dssp BCTTBGG
T ss_pred CCCCchh
Confidence 9988764
No 274
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.39 E-value=9.2e-13 Score=127.64 Aligned_cols=123 Identities=22% Similarity=0.224 Sum_probs=68.2
Q ss_pred cccceeeeeeeeeecC---Cc----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSD---GV----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~---~~----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
+.+|+.|+|.++.... +. .....++|++|.|++..+..|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 3556666665543321 11 1122345666666655555566666666666666666655555566666666666
Q ss_pred ccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 78 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 78 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
|++|+|++..+..|..+++|+.|+|++|.+++.++..+. ..+++++|.+.
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC
Confidence 666666644444456666666666666666655544322 34555555553
No 275
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.38 E-value=1e-12 Score=123.96 Aligned_cols=125 Identities=21% Similarity=0.196 Sum_probs=100.8
Q ss_pred cccceeeeeeeeeecCCc-------eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSDGV-------FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-------~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
..+|+.|+|.++..+.-. .....++|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 39 ~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 39 PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 367888888776664311 1233467999999866667789999999999999999976666788999999999
Q ss_pred ccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccccCC
Q 008893 78 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICAT 130 (549)
Q Consensus 78 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~~~ 130 (549)
|++|+|+ .+|..+..+++|+.|+|++|.|++.++..+. ..+++++|++.|.+
T Consensus 119 Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 119 MCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred ccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 9999999 8898999999999999999999987775443 56789999998875
No 276
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=6.6e-13 Score=133.57 Aligned_cols=103 Identities=18% Similarity=0.248 Sum_probs=91.1
Q ss_pred hhhcccC-cccccCCcccCCCCCCCEEEccC-CcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccC
Q 008893 27 GRLLQNN-NISGHIPTEIGKLSKLLTLDLSN-NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 104 (549)
Q Consensus 27 ~l~l~~n-~l~~~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 104 (549)
.++++++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3467777 888 5788 99999999999996 999988788999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccc----cccccccCCccccCCC
Q 008893 105 NNLSGPVPSFH----AKTFNITGNSLICATG 131 (549)
Q Consensus 105 N~l~~~~p~~~----~~~~~l~~N~~~~~~~ 131 (549)
|+|++.++..+ ...+++.+|++.|.+.
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 99998887654 3578999999999764
No 277
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.37 E-value=5.6e-13 Score=148.53 Aligned_cols=98 Identities=28% Similarity=0.533 Sum_probs=89.7
Q ss_pred cccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCCCC
Q 008893 30 LQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG 109 (549)
Q Consensus 30 l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 109 (549)
+..|.++|.+|..++++++|+.|||++|+|+|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|+|++|+++|
T Consensus 615 l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g 694 (768)
T 3rgz_A 615 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 694 (768)
T ss_dssp TTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEE
T ss_pred cccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccC
Confidence 44566777777788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccc-----ccccccCCccc
Q 008893 110 PVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 110 ~~p~~~~-----~~~~l~~N~~~ 127 (549)
.+|..+. +.+++++|++.
T Consensus 695 ~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 695 RIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp CCCGGGGGCCCCSEEECCSSEEE
T ss_pred cCChHHhCCCCCCEEECcCCccc
Confidence 9998654 67899999986
No 278
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.37 E-value=9e-13 Score=123.57 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=89.7
Q ss_pred hhhcccCcccccCC-cccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 27 GRLLQNNNISGHIP-TEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 27 ~l~l~~n~l~~~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.++|++|+|++..| ..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 36 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 115 (220)
T 2v70_A 36 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSN 115 (220)
T ss_dssp EEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTS
T ss_pred EEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCC
Confidence 36799999998865 46899999999999999999877779999999999999999999888888999999999999999
Q ss_pred CCCCCCCcccc-----ccccccCCccc
Q 008893 106 NLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 106 ~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
.|++..|..+. ..+++++|.+.
T Consensus 116 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 142 (220)
T 2v70_A 116 RITCVGNDSFIGLSSVRLLSLYDNQIT 142 (220)
T ss_dssp CCCCBCTTSSTTCTTCSEEECTTSCCC
T ss_pred cCCeECHhHcCCCccCCEEECCCCcCC
Confidence 99999887553 56889999885
No 279
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.36 E-value=5e-13 Score=145.40 Aligned_cols=105 Identities=22% Similarity=0.286 Sum_probs=94.0
Q ss_pred hhhcccCcc-cccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 27 GRLLQNNNI-SGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 27 ~l~l~~n~l-~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.++|++|++ .+.+|..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 473 ~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N 552 (635)
T 4g8a_A 473 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552 (635)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTS
T ss_pred hhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCC
Confidence 366888874 4567889999999999999999999989999999999999999999999888889999999999999999
Q ss_pred CCCCCCCcccc------ccccccCCccccCCC
Q 008893 106 NLSGPVPSFHA------KTFNITGNSLICATG 131 (549)
Q Consensus 106 ~l~~~~p~~~~------~~~~l~~N~~~~~~~ 131 (549)
+|++.+|..+. +.+++++|++.|.|.
T Consensus 553 ~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 553 HIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred cCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999987543 468999999999864
No 280
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.35 E-value=1.4e-12 Score=117.37 Aligned_cols=87 Identities=24% Similarity=0.255 Sum_probs=78.4
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+|++..|..|+++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 37 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 116 (174)
T 2r9u_A 37 RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNP 116 (174)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSC
T ss_pred EEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCC
Confidence 46799999999989999999999999999999997655667999999999999999996666669999999999999999
Q ss_pred CCCCCCc
Q 008893 107 LSGPVPS 113 (549)
Q Consensus 107 l~~~~p~ 113 (549)
|.+.++.
T Consensus 117 ~~c~~~~ 123 (174)
T 2r9u_A 117 WDCECRD 123 (174)
T ss_dssp BCTTBGG
T ss_pred ccccccc
Confidence 9987764
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.35 E-value=2.4e-12 Score=123.21 Aligned_cols=101 Identities=24% Similarity=0.211 Sum_probs=91.0
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.
T Consensus 39 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 118 (251)
T 3m19_A 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCc
Confidence 36799999999888899999999999999999998888889999999999999999997777889999999999999999
Q ss_pred CCCCCCcccc-----ccccccCCccc
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
|++.++..+. ..+++++|.+.
T Consensus 119 l~~~~~~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 119 LKSLPSGVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcChhHhccCCcccEEECcCCcCC
Confidence 9988876542 56889999885
No 282
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.34 E-value=9.5e-13 Score=128.56 Aligned_cols=123 Identities=19% Similarity=0.100 Sum_probs=70.9
Q ss_pred cccceeeeeeeee-ecCC---c----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCee
Q 008893 5 LEKVLIIVLIQVI-CSDG---V----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 76 (549)
Q Consensus 5 ~~~~~~~~~~~~~-c~~~---~----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 76 (549)
+++|+.|++.++. ...- . .....++|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|+.|
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 3566666666553 2110 0 112234566677666666666666677777777776665444556666666666
Q ss_pred eccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 77 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 77 ~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
+|++|+|++..+..|..+++|+.|+|++|.+++..|..+. +.+++++|.+.
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 214 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCC
Confidence 6666666644444566666666666666666655554332 34555555553
No 283
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.34 E-value=8.7e-13 Score=133.51 Aligned_cols=84 Identities=29% Similarity=0.234 Sum_probs=43.1
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.|
T Consensus 69 L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 148 (361)
T 2xot_A 69 LLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148 (361)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcC
Confidence 34555555544444555555555555555555544444455555555555555555544444555555555555555555
Q ss_pred CCCC
Q 008893 108 SGPV 111 (549)
Q Consensus 108 ~~~~ 111 (549)
++.+
T Consensus 149 ~~l~ 152 (361)
T 2xot_A 149 SRFP 152 (361)
T ss_dssp CSCC
T ss_pred CeeC
Confidence 5433
No 284
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.33 E-value=1.4e-12 Score=141.88 Aligned_cols=116 Identities=21% Similarity=0.132 Sum_probs=98.2
Q ss_pred eeeeecCCceeehh---------hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccc
Q 008893 14 IQVICSDGVFFSFG---------RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLT 84 (549)
Q Consensus 14 ~~~~c~~~~~~~~~---------l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 84 (549)
..+.|+...++.+| ++|++|+|++..|.+|.+|++|++|||++|+|++..|..|.+|++|++|+|++|+|+
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 45789876665554 679999999888889999999999999999999777778999999999999999999
Q ss_pred cCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccccC
Q 008893 85 GAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 129 (549)
Q Consensus 85 g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~~ 129 (549)
+..|..|.++++|+.|+|++|.|++.++..+. +.+++++|.+...
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~ 163 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 163 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC
Confidence 76677899999999999999999988776543 5678888887543
No 285
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.33 E-value=4.2e-12 Score=117.81 Aligned_cols=115 Identities=22% Similarity=0.196 Sum_probs=95.3
Q ss_pred eeeeeecCCcee---------ehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccc
Q 008893 13 LIQVICSDGVFF---------SFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSL 83 (549)
Q Consensus 13 ~~~~~c~~~~~~---------~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 83 (549)
+.++.|+...+. ...++|++|+|++..+..|+++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 9 ~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 88 (208)
T 2o6s_A 9 GTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88 (208)
T ss_dssp TTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcC
Confidence 446677654433 33467999999977777899999999999999999966666789999999999999999
Q ss_pred ccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 84 TGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 84 ~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
++..+..|..+++|+.|+|++|.|++.++..+. +.+++++|.+.
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (208)
T 2o6s_A 89 QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc
Confidence 977677789999999999999999988876443 56889999875
No 286
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.32 E-value=1.7e-12 Score=135.55 Aligned_cols=126 Identities=21% Similarity=0.155 Sum_probs=96.5
Q ss_pred ccceeeeeeeeeecC-------CceeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeec
Q 008893 6 EKVLIIVLIQVICSD-------GVFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 78 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~-------~~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 78 (549)
.+|+.+++.++.... .-.....++|++|.|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 356666665543321 0112234678888888888888888888999999999888777888888899999999
Q ss_pred cCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccccCCC
Q 008893 79 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 131 (549)
Q Consensus 79 ~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~~~~ 131 (549)
++|++++..|..|..+++|+.|+|++|+|++.++..+. +.+++++|++.|.++
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99998888888888888999999999999887765432 567888999888764
No 287
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.32 E-value=1.3e-12 Score=128.86 Aligned_cols=100 Identities=20% Similarity=0.264 Sum_probs=58.1
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCC-CCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTG-PIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
++|++|.+++..|..|.++++|++|+|++|.+++ .+|..+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.
T Consensus 131 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 210 (306)
T 2z66_A 131 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210 (306)
T ss_dssp EECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCc
Confidence 4466666665556666666666666666666654 355556666666666666666665555556666666666666666
Q ss_pred CCCCCCccc-----cccccccCCccc
Q 008893 107 LSGPVPSFH-----AKTFNITGNSLI 127 (549)
Q Consensus 107 l~~~~p~~~-----~~~~~l~~N~~~ 127 (549)
+++..+..+ .+.+++++|.+.
T Consensus 211 l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 211 FFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp CSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred cCccChhhccCcccCCEeECCCCCCc
Confidence 655444322 134555555553
No 288
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.31 E-value=4.6e-12 Score=122.80 Aligned_cols=121 Identities=18% Similarity=0.171 Sum_probs=83.1
Q ss_pred cccceeeeeeeeeecCC-ce----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDG-VF----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~-~~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+++|+.|++.+....+- .+ ....++|++|.+++. +.+.++++|++|+|++|+|++..|..|..+++|+.|+|+
T Consensus 40 l~~L~~L~l~~~~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp HTTCCEEECTTSCCCCCTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ccceeeeeeCCCCcccccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 34566666655544321 11 122356788887752 467788888888888888886666667788888888888
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
+|++++..|..|..+++|+.|++++|.+++.++..+. ..+++++|.+.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 170 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC
Confidence 8888866666677888888888888888877765432 55677777765
No 289
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.30 E-value=9.4e-13 Score=148.29 Aligned_cols=126 Identities=29% Similarity=0.331 Sum_probs=101.0
Q ss_pred cccceeeeeeeeeecCC--------ceeehhhhcccCccc-----ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCc
Q 008893 5 LEKVLIIVLIQVICSDG--------VFFSFGRLLQNNNIS-----GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLE 71 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~--------~~~~~~l~l~~n~l~-----~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~ 71 (549)
+.+|+.|+|.++..+.- ......++|++|.++ +..|..|.++++|+.|+|++|+|++..|..|..++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 46777888877765421 112334678888887 44556788999999999999999988888899999
Q ss_pred ccCeeeccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc--ccccccCCccccCCCC
Q 008893 72 TLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLICATGA 132 (549)
Q Consensus 72 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~~~~~~~~ 132 (549)
+|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+. ..+++++|++.|.|..
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 999999999999976666665 8999999999999999998764 5689999999998753
No 290
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.30 E-value=1.1e-12 Score=142.78 Aligned_cols=112 Identities=21% Similarity=0.272 Sum_probs=99.3
Q ss_pred eeeeecCCceeehhhhcccCcccccCCcccCCCCCCCEEEccCCc-----------------------------------
Q 008893 14 IQVICSDGVFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNF----------------------------------- 58 (549)
Q Consensus 14 ~~~~c~~~~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~----------------------------------- 58 (549)
.||.|+.. .++..++|++|.++|.+|++|++|++|+.|+|++|.
T Consensus 73 ~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~ 151 (636)
T 4eco_A 73 PGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVD 151 (636)
T ss_dssp TTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTC
T ss_pred CCeEEcCC-CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhc
Confidence 69999654 578899999999999999999999999999999984
Q ss_pred -------------------------------------------CCCCCcccccCCcccCeeeccCcccccC---------
Q 008893 59 -------------------------------------------FTGPIPSTVSHLETLQYLRLNNNSLTGA--------- 86 (549)
Q Consensus 59 -------------------------------------------l~g~~p~~~~~l~~L~~L~l~~N~l~g~--------- 86 (549)
|+| +|..|+++++|++|+|++|+|+|.
T Consensus 152 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 152 YDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp CCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred cCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 445 888999999999999999999986
Q ss_pred --------CCcccc--cCCCCceEeccCCCCCCCCCcccc-----ccccccCCc-cc
Q 008893 87 --------IPPSLS--NMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNS-LI 127 (549)
Q Consensus 87 --------~p~~~~--~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~-~~ 127 (549)
+|..++ ++++|+.|+|++|.+.|.+|..+. +.+++++|. +.
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~ 287 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGIS 287 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSC
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCc
Confidence 999999 999999999999999999997654 567889997 53
No 291
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=1.6e-11 Score=118.35 Aligned_cols=145 Identities=13% Similarity=0.070 Sum_probs=112.9
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-CCCccceEEEEecCCceeeE
Q 008893 224 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLV 302 (549)
Q Consensus 224 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 302 (549)
.....|.....++.|+.+.||++... ++.+++|+...... .....+.+|+.+++.+. +..+.++++++...+..++|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34457877788888899999999754 68899999865321 11235788999998884 67788999999888889999
Q ss_pred eeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 008893 303 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ--------------------------------------- 343 (549)
Q Consensus 303 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~--------------------------------------- 343 (549)
|||++|.+|.+.+. +......++.+++.+|..||+.
T Consensus 89 ~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp EECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999887642 1223457888999999999981
Q ss_pred -----------------CCCceEecccCcCeeeecCCCceEEeeccccc
Q 008893 344 -----------------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 375 (549)
Q Consensus 344 -----------------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 375 (549)
..+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01469999999999999876566799999775
No 292
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.27 E-value=5.9e-12 Score=130.97 Aligned_cols=103 Identities=24% Similarity=0.288 Sum_probs=89.3
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+|+ .+| .+.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 189 ~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 266 (440)
T 3zyj_A 189 YLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNN 266 (440)
T ss_dssp EEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSC
T ss_pred eecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCC
Confidence 3568888887 555 48888999999999999998888999999999999999999998888899999999999999999
Q ss_pred CCCCCCcccc-----ccccccCCccccCCC
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLICATG 131 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~~~~ 131 (549)
|++.++..+. +.+++++|++.|.|.
T Consensus 267 l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 267 LTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9988876543 578999999999874
No 293
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.26 E-value=9.4e-12 Score=121.81 Aligned_cols=119 Identities=24% Similarity=0.212 Sum_probs=73.8
Q ss_pred ccceeeeeeeeeecCC-------ceeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeec
Q 008893 6 EKVLIIVLIQVICSDG-------VFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 78 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~~-------~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 78 (549)
++|+.|+|.++....- -.....++|++|.|++..+. +.+++|++|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 4566666655544211 01122355777777644332 66777777777777776 56666777777777777
Q ss_pred cCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 79 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 79 ~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
++|+|++..|..|..+++|+.|+|++|.|++.++..+. ..+++++|.+.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 77777755556677777777777777777766655432 45666677664
No 294
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.25 E-value=8.5e-12 Score=130.23 Aligned_cols=103 Identities=23% Similarity=0.284 Sum_probs=90.8
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+|++. | .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.
T Consensus 200 ~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 277 (452)
T 3zyi_A 200 YLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNN 277 (452)
T ss_dssp EEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCc
Confidence 356888888844 4 58889999999999999998889999999999999999999998889999999999999999999
Q ss_pred CCCCCCcccc-----ccccccCCccccCCC
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLICATG 131 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~~~~ 131 (549)
|++.++..+. ..+++++|++.|.+.
T Consensus 278 l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 278 LSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9988876543 568999999999875
No 295
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.25 E-value=6.7e-12 Score=126.94 Aligned_cols=101 Identities=22% Similarity=0.180 Sum_probs=90.3
Q ss_pred hhcccCcccccCCcccC-CCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 28 RLLQNNNISGHIPTEIG-KLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
++|++|+|++..+..|. ++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.
T Consensus 44 L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 123 (361)
T 2xot_A 44 LDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNH 123 (361)
T ss_dssp EECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCc
Confidence 67999999988888888 99999999999999997777889999999999999999997777789999999999999999
Q ss_pred CCCCCCcccc-----ccccccCCcccc
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~ 128 (549)
|++..|..+. ..+++++|.+..
T Consensus 124 i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 124 IVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred ccEECHHHhCCcccCCEEECCCCcCCe
Confidence 9988776543 568899998853
No 296
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.25 E-value=9.8e-12 Score=123.95 Aligned_cols=97 Identities=21% Similarity=0.330 Sum_probs=54.9
Q ss_pred hhcccCcccccCCcccCC---------CCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCc
Q 008893 28 RLLQNNNISGHIPTEIGK---------LSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLA 98 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~---------l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 98 (549)
++|++|++.+.+|..++. +++|++|+|++|+|+ .+|..+.++++|+.|+|++|+++ .+|..+..+++|+
T Consensus 155 L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~ 232 (328)
T 4fcg_A 155 LSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLE 232 (328)
T ss_dssp EEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCC
T ss_pred EECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCC
Confidence 445565555566555443 566666666666665 55555666666666666666665 3444555666666
Q ss_pred eEeccCCCCCCCCCcccc-----ccccccCCcc
Q 008893 99 FLDLSYNNLSGPVPSFHA-----KTFNITGNSL 126 (549)
Q Consensus 99 ~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~ 126 (549)
.|+|++|.+.+.+|..+. +.+++++|.+
T Consensus 233 ~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 265 (328)
T 4fcg_A 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSN 265 (328)
T ss_dssp EEECTTCTTCCBCCCCTTCCCCCCEEECTTCTT
T ss_pred EEECcCCcchhhhHHHhcCCCCCCEEECCCCCc
Confidence 666666666555554332 3445555544
No 297
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.25 E-value=2.5e-12 Score=143.45 Aligned_cols=113 Identities=23% Similarity=0.263 Sum_probs=99.2
Q ss_pred eeeeecCCceeehhhhcccCcccccCCcccCCCCCCCEEEc-cCCcCCCC------------------------------
Q 008893 14 IQVICSDGVFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDL-SNNFFTGP------------------------------ 62 (549)
Q Consensus 14 ~~~~c~~~~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~l-s~N~l~g~------------------------------ 62 (549)
.||.|+. ..++..++|++|+|+|.+|++|++|++|+.|+| ++|.++|.
T Consensus 315 ~GV~C~~-~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~ 393 (876)
T 4ecn_A 315 PGVDLDN-NGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLD 393 (876)
T ss_dssp TTEEECT-TSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTC
T ss_pred CceEecC-CCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhc
Confidence 7899975 456888999999999999999999999999999 78766554
Q ss_pred ----------------------------------------------CcccccCCcccCeeeccCccccc-----------
Q 008893 63 ----------------------------------------------IPSTVSHLETLQYLRLNNNSLTG----------- 85 (549)
Q Consensus 63 ----------------------------------------------~p~~~~~l~~L~~L~l~~N~l~g----------- 85 (549)
+|..|++|++|+.|+|++|+|+|
T Consensus 394 ~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s 473 (876)
T 4ecn_A 394 YDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDAN 473 (876)
T ss_dssp CCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred cCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccc
Confidence 88899999999999999999998
Q ss_pred ------CCCcccc--cCCCCceEeccCCCCCCCCCcccc-----ccccccCCc-cc
Q 008893 86 ------AIPPSLS--NMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNS-LI 127 (549)
Q Consensus 86 ------~~p~~~~--~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~-~~ 127 (549)
.+|..++ ++++|+.|+|++|.+.|.+|..+. ..+++++|. +.
T Consensus 474 ~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ls 529 (876)
T 4ecn_A 474 SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGIS 529 (876)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSC
T ss_pred cccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcc
Confidence 3999987 999999999999999999997553 567889997 53
No 298
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.24 E-value=9.3e-12 Score=114.04 Aligned_cols=108 Identities=24% Similarity=0.181 Sum_probs=91.1
Q ss_pred cccceeeeeeeeeecCC--ce----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeec
Q 008893 5 LEKVLIIVLIQVICSDG--VF----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 78 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~--~~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 78 (549)
..+|+.|+|.++....- .+ ....++|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 30 ~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 30 PRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp CTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 35778888877766431 11 2223679999999888889999999999999999999888889999999999999
Q ss_pred cCcccccCCCcccccCCCCceEeccCCCCCCCCC
Q 008893 79 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 112 (549)
Q Consensus 79 ~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p 112 (549)
++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9999996666679999999999999999987654
No 299
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.24 E-value=5.9e-12 Score=110.12 Aligned_cols=101 Identities=19% Similarity=0.221 Sum_probs=85.3
Q ss_pred ehhhhcccCccc-ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEecc
Q 008893 25 SFGRLLQNNNIS-GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLS 103 (549)
Q Consensus 25 ~~~l~l~~n~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~ 103 (549)
...+++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|+++
T Consensus 19 l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp CSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred CeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 445779999998 88899999999999999999999965 788999999999999999997788888889999999999
Q ss_pred CCCCCCCC-Cccc-----cccccccCCccc
Q 008893 104 YNNLSGPV-PSFH-----AKTFNITGNSLI 127 (549)
Q Consensus 104 ~N~l~~~~-p~~~-----~~~~~l~~N~~~ 127 (549)
+|.+++.. +..+ ...+++++|.+.
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 99998753 2322 256788898875
No 300
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.23 E-value=1.4e-11 Score=111.18 Aligned_cols=109 Identities=19% Similarity=0.097 Sum_probs=90.7
Q ss_pred cccceeeeeeeeeecCC------c-eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSDG------V-FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~------~-~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
.++|+.|++.++....- . .....++|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 46788888887665421 1 1233467999999977777889999999999999999977777789999999999
Q ss_pred ccCcccccCCCcccccCCCCceEeccCCCCCCCCCc
Q 008893 78 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS 113 (549)
Q Consensus 78 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 113 (549)
|++|+|++..+..|..+++|+.|+|++|++++.+|.
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999999966666678899999999999999998874
No 301
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.23 E-value=2.3e-11 Score=117.68 Aligned_cols=123 Identities=22% Similarity=0.219 Sum_probs=98.6
Q ss_pred ccceeeeeeeeeecCC---ce----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeec
Q 008893 6 EKVLIIVLIQVICSDG---VF----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 78 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~~---~~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 78 (549)
.+|+.|+|.++....- .+ ....++|++|.|+...+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 5678888877665431 11 2234679999999666667899999999999999999766677899999999999
Q ss_pred cCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCcccc
Q 008893 79 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 79 ~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~ 128 (549)
++|++++..|..|..+++|+.|+|++|.|++.++..+. +.+++++|.+..
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 99999987788889999999999999999987776442 567888988754
No 302
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.22 E-value=5.6e-12 Score=136.64 Aligned_cols=102 Identities=23% Similarity=0.285 Sum_probs=50.1
Q ss_pred hcccCcccc-cCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 29 LLQNNNISG-HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 29 ~l~~n~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
+|++|.+++ .+|..|+++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcC
Confidence 344555444 2444455555555555555555544444555555555555555555544455555555555555555555
Q ss_pred CCCCCcc-----ccccccccCCccccCC
Q 008893 108 SGPVPSF-----HAKTFNITGNSLICAT 130 (549)
Q Consensus 108 ~~~~p~~-----~~~~~~l~~N~~~~~~ 130 (549)
+..++.. ....+++++|++.|.+
T Consensus 534 ~~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 534 ETSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp CCEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred cccCHhHhhhcccCcEEEccCCCcccCC
Confidence 5332221 0133455555555544
No 303
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.22 E-value=9.7e-12 Score=111.14 Aligned_cols=99 Identities=22% Similarity=0.250 Sum_probs=59.7
Q ss_pred hhhcccCccc-ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 27 GRLLQNNNIS-GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 27 ~l~l~~n~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.++|++|.++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|
T Consensus 28 ~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 105 (168)
T 2ell_A 28 ELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGN 105 (168)
T ss_dssp EEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSS
T ss_pred EEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCC
Confidence 4556666665 55666666666666666666666643 55666666666666666666556665555666666666666
Q ss_pred CCCCCCC-ccc-----cccccccCCccc
Q 008893 106 NLSGPVP-SFH-----AKTFNITGNSLI 127 (549)
Q Consensus 106 ~l~~~~p-~~~-----~~~~~l~~N~~~ 127 (549)
.|++..+ ..+ ...+++++|++.
T Consensus 106 ~l~~~~~~~~l~~l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 106 KLKDISTLEPLKKLECLKSLDLFNCEVT 133 (168)
T ss_dssp SCCSSGGGGGGSSCSCCCEEECCSSGGG
T ss_pred ccCcchhHHHHhcCCCCCEEEeeCCcCc
Confidence 6665431 111 144566666654
No 304
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.21 E-value=1.6e-11 Score=112.92 Aligned_cols=77 Identities=22% Similarity=0.286 Sum_probs=43.0
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
+++++|.++ .++.+.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.
T Consensus 71 L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 71 LTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp EEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred EEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 345555433 22345555666666666666555455555555666666666666555555555555566666666655
No 305
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.21 E-value=9.7e-12 Score=130.69 Aligned_cols=107 Identities=22% Similarity=0.204 Sum_probs=93.9
Q ss_pred ehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccC
Q 008893 25 SFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 104 (549)
Q Consensus 25 ~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 104 (549)
...++|++|+|++..+..|.++++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 226 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (477)
T 2id5_A 226 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 305 (477)
T ss_dssp CSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCS
T ss_pred ccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCC
Confidence 34567889999855556899999999999999999987888899999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccc-----ccccccCCccccCCC
Q 008893 105 NNLSGPVPSFHA-----KTFNITGNSLICATG 131 (549)
Q Consensus 105 N~l~~~~p~~~~-----~~~~l~~N~~~~~~~ 131 (549)
|.|++.++..+. +.+++++|++.|.+.
T Consensus 306 N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 306 NQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 999988876543 578999999998753
No 306
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.21 E-value=1.4e-11 Score=132.43 Aligned_cols=103 Identities=19% Similarity=0.306 Sum_probs=74.7
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCC-CCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFT-GPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
++|++|.+++..|..|.++++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|++++|.
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 457777777777777777777777777777776 4577777777777777777777777667777777777777777777
Q ss_pred CCCCCCcccc-----ccccccCCccccCC
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLICAT 130 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~~~~ 130 (549)
+++.+|..+. +.+++++|++.|.+
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 7777665432 45677777777664
No 307
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.20 E-value=1.3e-11 Score=110.40 Aligned_cols=121 Identities=23% Similarity=0.153 Sum_probs=96.4
Q ss_pred cccceeeeeeeeeecCCce--------eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCee
Q 008893 5 LEKVLIIVLIQVICSDGVF--------FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 76 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~~--------~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 76 (549)
..+|+.|++.++...++.+ ....++|++|.|++. ..++.+++|++|+|++|++++.+|..+.++++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 4678889998876652221 222367999999966 789999999999999999998788888889999999
Q ss_pred eccCcccccCC-CcccccCCCCceEeccCCCCCCCCC---ccc-----cccccccCCccc
Q 008893 77 RLNNNSLTGAI-PPSLSNMSQLAFLDLSYNNLSGPVP---SFH-----AKTFNITGNSLI 127 (549)
Q Consensus 77 ~l~~N~l~g~~-p~~~~~l~~L~~l~l~~N~l~~~~p---~~~-----~~~~~l~~N~~~ 127 (549)
+|++|+|++.. +..+..+++|+.|++++|.+++.++ ..+ ...+++++|...
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999999532 2789999999999999999998876 222 245677777664
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.20 E-value=2.5e-11 Score=118.44 Aligned_cols=124 Identities=20% Similarity=0.197 Sum_probs=101.2
Q ss_pred cccceeeeeeeeeecC---Cc----eeehhhhcccCc-ccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCee
Q 008893 5 LEKVLIIVLIQVICSD---GV----FFSFGRLLQNNN-ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 76 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~---~~----~~~~~l~l~~n~-l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 76 (549)
+.+|+.|+|.++.... .. .....++|++|. ++...|..|.++++|++|+|++|++++..|..|.++++|+.|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 4678888887764431 11 123346799997 887778899999999999999999998888899999999999
Q ss_pred eccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCcccc
Q 008893 77 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 77 ~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~ 128 (549)
+|++|++++..+..|..+++|+.|+|++|.+++.++..+. ..+++++|.+..
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 9999999977777799999999999999999987775433 568899998753
No 309
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.20 E-value=3.8e-11 Score=119.68 Aligned_cols=121 Identities=17% Similarity=0.198 Sum_probs=98.2
Q ss_pred cccceeeeeeeeeecCCc----------------eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc
Q 008893 5 LEKVLIIVLIQVICSDGV----------------FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS 68 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~----------------~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 68 (549)
+.+|+.|+|.++...... .....++|++|.|+ .+|..++++++|++|+|++|+++ .+|+.+.
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhc
Confidence 567888888775432211 12233679999998 88888999999999999999999 4777899
Q ss_pred CCcccCeeeccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 69 HLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 69 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
.+++|+.|+|++|++.+.+|..|..+++|+.|+|++|.+.+.+|..+. +.+++++|++.
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 999999999999999999999999999999999999999998887543 56788888774
No 310
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.20 E-value=2.2e-11 Score=130.27 Aligned_cols=97 Identities=25% Similarity=0.335 Sum_probs=86.6
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+|++ +|. |++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .|..+++|+.|+|++|.
T Consensus 445 ~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~ 519 (567)
T 1dce_A 445 VLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 519 (567)
T ss_dssp EEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCC
Confidence 37899999996 676 999999999999999999 899999999999999999999996 77 89999999999999999
Q ss_pred CCCCC-Ccccc-----ccccccCCcccc
Q 008893 107 LSGPV-PSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 107 l~~~~-p~~~~-----~~~~l~~N~~~~ 128 (549)
|++.+ |..+. ..+++++|++..
T Consensus 520 l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 520 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 99986 66543 568999999853
No 311
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.19 E-value=3.2e-11 Score=120.32 Aligned_cols=100 Identities=23% Similarity=0.258 Sum_probs=66.4
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|.+++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.|
T Consensus 197 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 456677777666667777777777777777777655556777777777777777777 6666677777777777777777
Q ss_pred CCCCCcccc-----------ccccccCCcccc
Q 008893 108 SGPVPSFHA-----------KTFNITGNSLIC 128 (549)
Q Consensus 108 ~~~~p~~~~-----------~~~~l~~N~~~~ 128 (549)
++..+..+. ..+++++|++.+
T Consensus 276 ~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 276 SAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CccChhhcCCcccccccccccceEeecCcccc
Confidence 665554331 235566666643
No 312
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.19 E-value=4.9e-12 Score=139.50 Aligned_cols=120 Identities=25% Similarity=0.305 Sum_probs=76.0
Q ss_pred cccceeeeeeeeeecCC-----c-eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeec
Q 008893 5 LEKVLIIVLIQVICSDG-----V-FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 78 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~-----~-~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 78 (549)
+.+|+.|+|.++....- . .....|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|+.|++|+.|+|
T Consensus 223 l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 223 DQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 34566666655544310 0 11223567777777 66777777777777777777777 66777777777777777
Q ss_pred cCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc------ccccccCCccc
Q 008893 79 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLI 127 (549)
Q Consensus 79 ~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~------~~~~l~~N~~~ 127 (549)
++|.|+ .+|..|.++++|+.|+|++|.|++.+|..+. ..+++.+|.+.
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~ 354 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPE 354 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCccc
Confidence 777776 6666677777777777777777776665442 12456666553
No 313
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.19 E-value=3.3e-11 Score=115.69 Aligned_cols=137 Identities=15% Similarity=0.073 Sum_probs=100.4
Q ss_pred CCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCC--ccceEEEEecCCceeeEeec
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGFCMTTTERLLVYPY 305 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~ 305 (549)
++....+.+.|..+.||++...+|+.+++|+..... ...+..|+.+++.+.+.+ +.+++++....+..++||||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 343333334556699999987778889999976531 234778999998886544 45688888877788999999
Q ss_pred cCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcC-----------------------------------------
Q 008893 306 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC----------------------------------------- 344 (549)
Q Consensus 306 ~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 344 (549)
++|.++. ... .+ ...++.+++..|..||+..
T Consensus 97 i~G~~l~--~~~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 97 VPGQDLL--SSH---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp CSSEETT--TSC---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred cCCcccC--cCc---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 9998884 221 12 2367778888888888742
Q ss_pred --------------CCceEecccCcCeeeecCCCceEEeecccccc
Q 008893 345 --------------DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 376 (549)
Q Consensus 345 --------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 376 (549)
.+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998753
No 314
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=2.4e-11 Score=122.07 Aligned_cols=104 Identities=18% Similarity=0.136 Sum_probs=84.5
Q ss_pred hhhccc-CcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 27 GRLLQN-NNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 27 ~l~l~~-n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.|+|++ |.|++..|..|++|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|
T Consensus 35 ~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N 113 (347)
T 2ifg_A 35 ELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGN 113 (347)
T ss_dssp EEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSS
T ss_pred EEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCC
Confidence 467886 999988889999999999999999999998899999999999999999999966666666665 999999999
Q ss_pred CCCCCCCcccc------ccccccCCccccCCC
Q 008893 106 NLSGPVPSFHA------KTFNITGNSLICATG 131 (549)
Q Consensus 106 ~l~~~~p~~~~------~~~~l~~N~~~~~~~ 131 (549)
.|.....-... ....+..+.+.|...
T Consensus 114 ~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 114 PLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp CCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred CccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 99976652211 223345566777653
No 315
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.18 E-value=1.1e-11 Score=108.43 Aligned_cols=106 Identities=22% Similarity=0.173 Sum_probs=89.1
Q ss_pred cccceeeeeeeeeecCCc--------eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCee
Q 008893 5 LEKVLIIVLIQVICSDGV--------FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 76 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~--------~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 76 (549)
..+|+.|++.++...++. .....++|++|.|++. ..++++++|++|+|++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888887665211 1223467999999976 789999999999999999998799988889999999
Q ss_pred eccCcccccC-CCcccccCCCCceEeccCCCCCCCCC
Q 008893 77 RLNNNSLTGA-IPPSLSNMSQLAFLDLSYNNLSGPVP 112 (549)
Q Consensus 77 ~l~~N~l~g~-~p~~~~~l~~L~~l~l~~N~l~~~~p 112 (549)
+|++|++++. .|..+..+++|+.|++++|.+++.++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 9999999963 34889999999999999999998776
No 316
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.17 E-value=2.1e-11 Score=120.17 Aligned_cols=124 Identities=20% Similarity=0.241 Sum_probs=98.8
Q ss_pred cccceeeeeeeeeecC------CceeehhhhcccCcccccCC-cccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSD------GVFFSFGRLLQNNNISGHIP-TEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~------~~~~~~~l~l~~n~l~~~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
+.+|+.|+|.++.... +-.....++|++|.+++..+ ..+.++++|++|+|++|.+++..|..|..+++|+.|+
T Consensus 77 ~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 77 TTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp CSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 4678888886654421 11122346799999987665 6889999999999999999988888899999999999
Q ss_pred ccCccccc-CCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCcccc
Q 008893 78 LNNNSLTG-AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 78 l~~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~ 128 (549)
|++|++++ .+|..|..+++|+.|++++|.+++..|..+. +.+++++|.+..
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 99999986 5888899999999999999999988776543 567889998754
No 317
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.17 E-value=2e-11 Score=132.24 Aligned_cols=85 Identities=20% Similarity=0.223 Sum_probs=44.1
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCC---CcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP---IPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 104 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~---~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 104 (549)
++|++|.+++..|..|+++++|++|+|++|.+++. .+..+..+++|+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 430 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 509 (606)
T 3t6q_A 430 LNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509 (606)
T ss_dssp EECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCC
Confidence 44555555555555555555555555555555541 223445555555555555555544455555555555555555
Q ss_pred CCCCCCCC
Q 008893 105 NNLSGPVP 112 (549)
Q Consensus 105 N~l~~~~p 112 (549)
|++++.+|
T Consensus 510 N~l~~~~~ 517 (606)
T 3t6q_A 510 NRLTSSSI 517 (606)
T ss_dssp SCCCGGGG
T ss_pred CccCcCCh
Confidence 55554444
No 318
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.16 E-value=5e-11 Score=129.83 Aligned_cols=98 Identities=21% Similarity=0.298 Sum_probs=55.3
Q ss_pred hhcccCcccccCCcccC--CCCCCCEEEccCCcCCCCCcccccCCcccCeeec------cCcccccCCCcccccCCCCce
Q 008893 28 RLLQNNNISGHIPTEIG--KLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL------NNNSLTGAIPPSLSNMSQLAF 99 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~--~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l------~~N~l~g~~p~~~~~l~~L~~ 99 (549)
++|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+.|+| ++|++.+.+|..|..+++|+.
T Consensus 493 L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~ 570 (636)
T 4eco_A 493 IDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQ 570 (636)
T ss_dssp EECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCE
T ss_pred EECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCE
Confidence 455566655 4555554 56666666666666664 5556666666666666 345555566666666666666
Q ss_pred EeccCCCCCCCCCcccc---ccccccCCcccc
Q 008893 100 LDLSYNNLSGPVPSFHA---KTFNITGNSLIC 128 (549)
Q Consensus 100 l~l~~N~l~~~~p~~~~---~~~~l~~N~~~~ 128 (549)
|+|++|.| +.+|..+. ..+++++|++.|
T Consensus 571 L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 571 LQIGSNDI-RKVNEKITPNISVLDIKDNPNIS 601 (636)
T ss_dssp EECCSSCC-CBCCSCCCTTCCEEECCSCTTCE
T ss_pred EECCCCcC-CccCHhHhCcCCEEECcCCCCcc
Confidence 66666666 34443221 345566665554
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.16 E-value=4.7e-11 Score=115.86 Aligned_cols=113 Identities=20% Similarity=0.131 Sum_probs=93.7
Q ss_pred eeeecCCceeeh---------hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccccc
Q 008893 15 QVICSDGVFFSF---------GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTG 85 (549)
Q Consensus 15 ~~~c~~~~~~~~---------~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 85 (549)
.+.|++..+..+ .++|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++
T Consensus 11 ~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (276)
T 2z62_A 11 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (276)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred eEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCc
Confidence 467766444333 36789999998888899999999999999999997777789999999999999999998
Q ss_pred CCCcccccCCCCceEeccCCCCCCCCCccc-----cccccccCCccc
Q 008893 86 AIPPSLSNMSQLAFLDLSYNNLSGPVPSFH-----AKTFNITGNSLI 127 (549)
Q Consensus 86 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~-----~~~~~l~~N~~~ 127 (549)
..|..|.++++|+.|++++|.+++..+..+ .+.+++++|.+.
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 137 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 137 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCC
T ss_pred cChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccc
Confidence 888889999999999999999998776433 256788888774
No 320
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.16 E-value=3.6e-11 Score=126.33 Aligned_cols=113 Identities=24% Similarity=0.314 Sum_probs=92.1
Q ss_pred eeeecCCceeehh---------hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccccc
Q 008893 15 QVICSDGVFFSFG---------RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTG 85 (549)
Q Consensus 15 ~~~c~~~~~~~~~---------l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 85 (549)
.+.|++..+..+| ++|++|+|++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|+|++
T Consensus 15 ~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 94 (477)
T 2id5_A 15 AVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 94 (477)
T ss_dssp EEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred EEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCc
Confidence 4667655544433 5789999998888899999999999999999998788899999999999999999996
Q ss_pred CCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 86 AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 86 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
..+..|.++++|+.|+|++|.+++.+|..+. +.+++++|.+.
T Consensus 95 ~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 141 (477)
T 2id5_A 95 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV 141 (477)
T ss_dssp CCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCC
T ss_pred cCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccc
Confidence 6666788999999999999999888776543 56778888764
No 321
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.16 E-value=4.6e-11 Score=129.45 Aligned_cols=113 Identities=21% Similarity=0.128 Sum_probs=75.0
Q ss_pred eeeecCCceeehh---------hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccccc
Q 008893 15 QVICSDGVFFSFG---------RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTG 85 (549)
Q Consensus 15 ~~~c~~~~~~~~~---------l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 85 (549)
.+.|++..++.+| ++|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 15 ~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~ 94 (606)
T 3vq2_A 15 TYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS 94 (606)
T ss_dssp EEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCC
T ss_pred ceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccc
Confidence 4566554443333 4577777776666677777777777777777776666677777777777777777776
Q ss_pred CCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 86 AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 86 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
..|..|.++++|++|+|++|.+++..|..+. +.+++++|.+.
T Consensus 95 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 141 (606)
T 3vq2_A 95 FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIH 141 (606)
T ss_dssp CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCC
T ss_pred cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCccc
Confidence 6677777777777777777777666554332 45566666654
No 322
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.14 E-value=4.4e-11 Score=129.57 Aligned_cols=114 Identities=18% Similarity=0.062 Sum_probs=92.5
Q ss_pred eeeecCCceeehh---------hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccccc
Q 008893 15 QVICSDGVFFSFG---------RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTG 85 (549)
Q Consensus 15 ~~~c~~~~~~~~~---------l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 85 (549)
.+.|++..+..+| ++|++|.|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 16 ~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 95 (606)
T 3t6q_A 16 TYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF 95 (606)
T ss_dssp EEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE
T ss_pred eEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc
Confidence 4667665544444 5788999998888899999999999999999988888889999999999999999988
Q ss_pred CCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCcccc
Q 008893 86 AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 86 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~ 128 (549)
..|..|.++++|+.|++++|.+++..|..+. +.+++++|.+..
T Consensus 96 ~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~ 143 (606)
T 3t6q_A 96 MAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISS 143 (606)
T ss_dssp ECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCC
T ss_pred cChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccc
Confidence 8888899999999999999999886554332 567888887754
No 323
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.14 E-value=5.4e-11 Score=124.12 Aligned_cols=110 Identities=21% Similarity=0.153 Sum_probs=90.2
Q ss_pred eeeecCCceeehh---------hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccccc
Q 008893 15 QVICSDGVFFSFG---------RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTG 85 (549)
Q Consensus 15 ~~~c~~~~~~~~~---------l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 85 (549)
.+.|++..+..+| ++|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++
T Consensus 58 ~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 137 (452)
T 3zyi_A 58 KVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV 137 (452)
T ss_dssp EEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSB
T ss_pred EEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCc
Confidence 4667655444333 6799999998889999999999999999999998888899999999999999999997
Q ss_pred CCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCC
Q 008893 86 AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGN 124 (549)
Q Consensus 86 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N 124 (549)
..+..|..+++|+.|+|++|.|++.++..+. ..+++++|
T Consensus 138 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 181 (452)
T 3zyi_A 138 IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL 181 (452)
T ss_dssp CCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC
T ss_pred cChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC
Confidence 7777799999999999999999876665432 45566664
No 324
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.14 E-value=6.9e-11 Score=127.79 Aligned_cols=124 Identities=17% Similarity=0.092 Sum_probs=94.9
Q ss_pred cccceeeeeeeeeecCC------c-eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSDG------V-FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~------~-~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
+.+++.+++.+.....- . .....++|++|.|++..|..|+++++|++|+|++|.|++..|..|+++++|+.|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45667777766554321 0 1233467889999988888899999999999999999987777888999999999
Q ss_pred ccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCcccc
Q 008893 78 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 78 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~ 128 (549)
|++|.|++..+..|.++++|+.|+|++|.|++.+|..+. ..+++++|.+..
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 999999855555678899999999999999888876543 567888887753
No 325
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.13 E-value=4e-11 Score=125.05 Aligned_cols=104 Identities=22% Similarity=0.205 Sum_probs=94.1
Q ss_pred ehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccC
Q 008893 25 SFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 104 (549)
Q Consensus 25 ~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 104 (549)
...++|++|.+++.+|..|+++++|++|+|++|++++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 44577999999999999999999999999999999988899999999999999999999988899999999999999999
Q ss_pred CCCCCCCCcccc-----ccccccCCcccc
Q 008893 105 NNLSGPVPSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 105 N~l~~~~p~~~~-----~~~~l~~N~~~~ 128 (549)
|.+++..|..+. +.+++++|.+..
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CcccccChhhccccccccEEECCCCcccc
Confidence 999988886543 568999998863
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.13 E-value=6.8e-11 Score=114.73 Aligned_cols=122 Identities=17% Similarity=0.067 Sum_probs=88.7
Q ss_pred ccceeeeeeeeeecCC---c----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeec
Q 008893 6 EKVLIIVLIQVICSDG---V----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 78 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~~---~----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 78 (549)
.+|+.|+|.++....- . .....++|++|.|++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 4577777766544310 1 12334668888888777778888888888888888888777778888888888888
Q ss_pred cCcccccCCCcccccCCCCceEeccCCCCCCC-CCcccc-----ccccccCCccc
Q 008893 79 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP-VPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 79 ~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~-~p~~~~-----~~~~l~~N~~~ 127 (549)
++|++++..+..+..+++|+.|++++|.+++. +|..+. +.+++++|.+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 88888866666788888888888888888763 355432 45677777664
No 327
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.12 E-value=3.2e-10 Score=114.46 Aligned_cols=143 Identities=14% Similarity=0.183 Sum_probs=107.0
Q ss_pred CCCeeeeeCCeEEEEEEECCCCEEEEEEcc--cCCCCCcHHHHHHHHHHHhhcc--CCCccceEEEEecC---CceeeEe
Q 008893 231 SKNLVGKGGFGNVYKGYLQDGTVVAVKRLK--DGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGFCMTT---TERLLVY 303 (549)
Q Consensus 231 ~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~--~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 303 (549)
..+.++.|.++.||+....+ ..+++|+.. ..........+.+|..+++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 34678999999999998764 678888876 3332222346788999999886 45678889988766 3478999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcC---------------------------------------
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC--------------------------------------- 344 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------- 344 (549)
||+++..+.+... ..++...+..++.+++..|..||+..
T Consensus 121 e~v~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 121 EFVSGRVLWDQSL--PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp ECCCCBCCCCTTC--TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred EecCCeecCCCcc--ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 9999988754322 24678888999999999999999730
Q ss_pred ----------------CCceEecccCcCeeeecCCCc--eEEeecccccc
Q 008893 345 ----------------DPKIIHRDVKAANILLDEYYE--AVVGDFGLAKL 376 (549)
Q Consensus 345 ----------------~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~~~~ 376 (549)
.+.++|||+++.||+++.++. +.|.||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997653 68999998864
No 328
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.11 E-value=1.3e-10 Score=118.66 Aligned_cols=123 Identities=17% Similarity=0.117 Sum_probs=95.1
Q ss_pred cccceeeeeeeeeecC--C-c----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSD--G-V----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~--~-~----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
+++++.+++.+..... . . .....++|++|.|++..|..|+++++|++|+|++|++++..|..|.++++|+.|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 5677888887765532 1 0 1233467889999887788899999999999999999977777889999999999
Q ss_pred ccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 78 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 78 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
|++|+|+...+..|..+++|+.|++++|.+++..|..+. +.+++++|.+.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 999999844444468899999999999999887776443 56788888775
No 329
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.11 E-value=1e-10 Score=121.47 Aligned_cols=111 Identities=22% Similarity=0.165 Sum_probs=91.3
Q ss_pred eeeecCCceeehh---------hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccccc
Q 008893 15 QVICSDGVFFSFG---------RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTG 85 (549)
Q Consensus 15 ~~~c~~~~~~~~~---------l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 85 (549)
.+.|++..+..+| ++|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++
T Consensus 47 ~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~ 126 (440)
T 3zyj_A 47 KVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 126 (440)
T ss_dssp EEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSS
T ss_pred EEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCe
Confidence 5667665555444 5799999998888999999999999999999998778899999999999999999996
Q ss_pred CCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCc
Q 008893 86 AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNS 125 (549)
Q Consensus 86 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~ 125 (549)
..+..|..+++|+.|+|++|.|++.++..+. +.+++++|.
T Consensus 127 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 127 IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp CCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT
T ss_pred eCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCC
Confidence 6666899999999999999999877665443 456666643
No 330
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.11 E-value=4.2e-11 Score=126.02 Aligned_cols=100 Identities=26% Similarity=0.227 Sum_probs=77.6
Q ss_pred hhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc-CCcccCeeeccCcccccCCCcccccCCCCceEeccC
Q 008893 26 FGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS-HLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 104 (549)
Q Consensus 26 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 104 (549)
..++|++|.|++..|..|+++++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++
T Consensus 123 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~ 200 (487)
T 3oja_A 123 KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSS 200 (487)
T ss_dssp EEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCS
T ss_pred CEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCC
Confidence 3467888888888888888888899999999988887787776 688888888888888855 32 34578888888888
Q ss_pred CCCCCCCCccc----cccccccCCccc
Q 008893 105 NNLSGPVPSFH----AKTFNITGNSLI 127 (549)
Q Consensus 105 N~l~~~~p~~~----~~~~~l~~N~~~ 127 (549)
|.|++.+|.+. ...+++++|.+.
T Consensus 201 N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 201 NKLAFMGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp SCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCHhHcCCCCccEEEecCCcCc
Confidence 88887766532 256778888775
No 331
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.10 E-value=6.7e-11 Score=126.48 Aligned_cols=104 Identities=24% Similarity=0.236 Sum_probs=88.4
Q ss_pred cceeeeeeeeeecCC-ce----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCc
Q 008893 7 KVLIIVLIQVICSDG-VF----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNN 81 (549)
Q Consensus 7 ~~~~~~~~~~~c~~~-~~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 81 (549)
.|+.|+|.++..+.- .+ ....++|++|.|+ .+|..|++|++|+.|+|++|+|++ +| .|++|++|+.|+|++|
T Consensus 442 ~L~~L~Ls~n~l~~lp~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 442 DVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp TCSEEECTTSCCSSCCCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CceEEEecCCCCCCCcCccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 466777776655431 11 1223679999999 889999999999999999999996 78 8999999999999999
Q ss_pred ccccCC-CcccccCCCCceEeccCCCCCCCCCc
Q 008893 82 SLTGAI-PPSLSNMSQLAFLDLSYNNLSGPVPS 113 (549)
Q Consensus 82 ~l~g~~-p~~~~~l~~L~~l~l~~N~l~~~~p~ 113 (549)
+|++.. |..|..+++|+.|+|++|+|++.+|.
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 999776 99999999999999999999998774
No 332
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.10 E-value=1.6e-10 Score=129.00 Aligned_cols=96 Identities=25% Similarity=0.297 Sum_probs=51.3
Q ss_pred hhcccCcccccCCcccCC--------CCCCCEEEccCCcCCCCCccccc--CCcccCeeeccCcccccCCCcccccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGK--------LSKLLTLDLSNNFFTGPIPSTVS--HLETLQYLRLNNNSLTGAIPPSLSNMSQL 97 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~--------l~~L~~L~ls~N~l~g~~p~~~~--~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 97 (549)
++|++|+|+ .+|..+.. |++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|
T Consensus 702 L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L 778 (876)
T 4ecn_A 702 IILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQL 778 (876)
T ss_dssp EECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTC
T ss_pred EECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCC
Confidence 455566655 44433222 125666666666665 4555554 55666666666666654 55555556666
Q ss_pred ceEeccC------CCCCCCCCcccc-----ccccccCCcc
Q 008893 98 AFLDLSY------NNLSGPVPSFHA-----KTFNITGNSL 126 (549)
Q Consensus 98 ~~l~l~~------N~l~~~~p~~~~-----~~~~l~~N~~ 126 (549)
+.|+|++ |.+.+.+|..+. ..+++++|.+
T Consensus 779 ~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 779 KAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp CEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 6665544 555555554332 3455555555
No 333
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.09 E-value=1.5e-10 Score=115.56 Aligned_cols=85 Identities=28% Similarity=0.338 Sum_probs=54.6
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|.+++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.|
T Consensus 198 L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l 276 (332)
T 2ft3_A 198 LHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNI 276 (332)
T ss_dssp CBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCC
Confidence 456666666555566666666666666666666555556666666666666666666 5666666666666666666666
Q ss_pred CCCCCc
Q 008893 108 SGPVPS 113 (549)
Q Consensus 108 ~~~~p~ 113 (549)
++..+.
T Consensus 277 ~~~~~~ 282 (332)
T 2ft3_A 277 TKVGVN 282 (332)
T ss_dssp CBCCTT
T ss_pred CccChh
Confidence 655443
No 334
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.09 E-value=1.1e-10 Score=126.25 Aligned_cols=123 Identities=20% Similarity=0.136 Sum_probs=100.0
Q ss_pred cccceeeeeeeeeecCC---ce----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSDG---VF----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~---~~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
+.+|+.|+|.++...+- .+ ....++|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|+.|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 46788999877654321 11 233477999999998888999999999999999999965555579999999999
Q ss_pred ccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc--ccccccCCccc
Q 008893 78 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLI 127 (549)
Q Consensus 78 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~~~ 127 (549)
|++|.|++..|..|..+++|+.|+|++|.|++..+..+. ..+++++|.+.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccc
Confidence 999999988888999999999999999999987554433 45677777664
No 335
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.08 E-value=6.1e-11 Score=106.82 Aligned_cols=98 Identities=20% Similarity=0.123 Sum_probs=62.9
Q ss_pred hhhcccCcccccCCcccCCCC-CCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLS-KLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.++|++|+|+. +|. +..+. +|++|+|++|+|++. +.|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 23 ~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 98 (176)
T 1a9n_A 23 ELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNN 98 (176)
T ss_dssp EEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSC
T ss_pred EEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCC
Confidence 45677777773 443 44444 777777777777753 56777777777777777777544444577777777777777
Q ss_pred CCCCCCC-ccc-----cccccccCCcccc
Q 008893 106 NLSGPVP-SFH-----AKTFNITGNSLIC 128 (549)
Q Consensus 106 ~l~~~~p-~~~-----~~~~~l~~N~~~~ 128 (549)
.|+..++ ..+ ...+++++|++..
T Consensus 99 ~i~~~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 99 SLVELGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp CCCCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred cCCcchhhHhhhcCCCCCEEEecCCCCCC
Confidence 7754332 011 2456777777753
No 336
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.08 E-value=1.4e-10 Score=123.28 Aligned_cols=102 Identities=21% Similarity=0.288 Sum_probs=54.8
Q ss_pred hhcccCcccc--cCCcccCCCCCCCEEEccCCcCCCCCccc-ccCC----------------------cccCeeeccCcc
Q 008893 28 RLLQNNNISG--HIPTEIGKLSKLLTLDLSNNFFTGPIPST-VSHL----------------------ETLQYLRLNNNS 82 (549)
Q Consensus 28 l~l~~n~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l----------------------~~L~~L~l~~N~ 82 (549)
++|++|+|++ .+|..++++++|++|+|++|++++.+|.. +..+ ++|+.|+|++|+
T Consensus 353 L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~ 432 (520)
T 2z7x_B 353 LILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNK 432 (520)
T ss_dssp EECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSC
T ss_pred EEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCc
Confidence 4455555554 33444555555555555555555434432 3334 455555555555
Q ss_pred cccCCCcccccCCCCceEeccCCCCCCCCCccc-----cccccccCCccccCC
Q 008893 83 LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH-----AKTFNITGNSLICAT 130 (549)
Q Consensus 83 l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~-----~~~~~l~~N~~~~~~ 130 (549)
|+ .+|..+..+++|+.|+|++|+|++.++..+ ...+++++|++.|.+
T Consensus 433 l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 433 IK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 55 555555566666666666666664443312 134566666666553
No 337
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.07 E-value=5.4e-11 Score=117.67 Aligned_cols=83 Identities=22% Similarity=0.223 Sum_probs=57.1
Q ss_pred hhhcccCcccccCCccc--CCCCCCCEEEccCCcCCCCCcccccCC-----cccCeeeccCcccccCCCcccccCCCCce
Q 008893 27 GRLLQNNNISGHIPTEI--GKLSKLLTLDLSNNFFTGPIPSTVSHL-----ETLQYLRLNNNSLTGAIPPSLSNMSQLAF 99 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~--~~l~~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 99 (549)
.++|++|+|++.+|..+ +++++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|..+++|+.
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 177 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALST 177 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCE
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCE
Confidence 35577777777677665 6777777777777777755 6666665 67777777777777666667777777777
Q ss_pred EeccCCCCCCC
Q 008893 100 LDLSYNNLSGP 110 (549)
Q Consensus 100 l~l~~N~l~~~ 110 (549)
|+|++|.+.|.
T Consensus 178 L~Ls~N~l~~~ 188 (312)
T 1wwl_A 178 LDLSDNPELGE 188 (312)
T ss_dssp EECCSCTTCHH
T ss_pred EECCCCCcCcc
Confidence 77777776553
No 338
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.07 E-value=1.9e-10 Score=123.53 Aligned_cols=125 Identities=20% Similarity=0.253 Sum_probs=66.3
Q ss_pred cccceeeeeeeeeecCCc-------eeehhhhcccCccccc--CCcccCCCCCCCEEEccCCcCCCCCccc-ccCC----
Q 008893 5 LEKVLIIVLIQVICSDGV-------FFSFGRLLQNNNISGH--IPTEIGKLSKLLTLDLSNNFFTGPIPST-VSHL---- 70 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-------~~~~~l~l~~n~l~~~--~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l---- 70 (549)
+.+|+.|++.++...+.. .....++|++|+|++. +|..|+++++|+.|+|++|++++.+|.. +..+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 455666666555443311 1122244556665542 2344555566666666666555434432 3333
Q ss_pred ------------------cccCeeeccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 71 ------------------ETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 71 ------------------~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++..+. ..+++++|++.
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBC
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcC
Confidence 45666666666665 5555555666666777777766654443221 34566677766
Q ss_pred cCC
Q 008893 128 CAT 130 (549)
Q Consensus 128 ~~~ 130 (549)
|.+
T Consensus 511 c~c 513 (562)
T 3a79_B 511 CTC 513 (562)
T ss_dssp CCH
T ss_pred CCc
Confidence 653
No 339
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.06 E-value=8.2e-11 Score=116.37 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=87.7
Q ss_pred cccceeeeeeeeeecCCc---------eeehhhhcccCcccccCCcccCCC-----CCCCEEEccCCcCCCCCcccccCC
Q 008893 5 LEKVLIIVLIQVICSDGV---------FFSFGRLLQNNNISGHIPTEIGKL-----SKLLTLDLSNNFFTGPIPSTVSHL 70 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~---------~~~~~l~l~~n~l~~~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~~l 70 (549)
+++|+.|+|.++...+.. .....++|++|+|++. |..++++ ++|++|+|++|+|++..|..|..+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 577888888887765311 1233467888888876 7777776 888888888888887777888888
Q ss_pred cccCeeeccCcccccC--CCccc--ccCCCCceEeccCCCCCCCC--C-cc-----ccccccccCCcccc
Q 008893 71 ETLQYLRLNNNSLTGA--IPPSL--SNMSQLAFLDLSYNNLSGPV--P-SF-----HAKTFNITGNSLIC 128 (549)
Q Consensus 71 ~~L~~L~l~~N~l~g~--~p~~~--~~l~~L~~l~l~~N~l~~~~--p-~~-----~~~~~~l~~N~~~~ 128 (549)
++|+.|+|++|++.|. +|..+ ..+++|+.|+|++|.|++.. + .. ..+.+++++|.+..
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 242 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD 242 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCS
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCc
Confidence 8888888888887765 33334 77888888888888887422 2 11 23567788887753
No 340
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.06 E-value=7.7e-11 Score=124.01 Aligned_cols=121 Identities=21% Similarity=0.111 Sum_probs=94.7
Q ss_pred cccceeeeeeeeeecCC--ceeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcc
Q 008893 5 LEKVLIIVLIQVICSDG--VFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 82 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~--~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 82 (549)
+.+|+.|+|.++...+- ......++|++|.|++..+. .+++|+.|+|++|.|++..|..|+.+++|+.|+|++|.
T Consensus 79 l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (487)
T ss_dssp CTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSC
T ss_pred CCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCC
Confidence 56788888877665421 11233467999999877664 45789999999999998888889999999999999999
Q ss_pred cccCCCcccc-cCCCCceEeccCCCCCCCCCccc---cccccccCCcccc
Q 008893 83 LTGAIPPSLS-NMSQLAFLDLSYNNLSGPVPSFH---AKTFNITGNSLIC 128 (549)
Q Consensus 83 l~g~~p~~~~-~l~~L~~l~l~~N~l~~~~p~~~---~~~~~l~~N~~~~ 128 (549)
|++..|..|. .+++|+.|+|++|.|++.++... ...+++++|.+..
T Consensus 156 l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~ 205 (487)
T 3oja_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF 205 (487)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE
T ss_pred CCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCC
Confidence 9988888876 78999999999999988755432 3567899998864
No 341
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.05 E-value=1.6e-10 Score=106.02 Aligned_cols=81 Identities=25% Similarity=0.332 Sum_probs=41.7
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
+++++|.|+ .+| .+..+++|++|+|++|.++ . ++.+..+++|+.|+|++|++++..|..|..+++|+.|++++|.+
T Consensus 49 L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i 124 (197)
T 4ezg_A 49 ITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAH 124 (197)
T ss_dssp EEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBC
T ss_pred EeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCcc
Confidence 345555555 333 3555555555555555444 2 22455555555555555555544455555555555555555555
Q ss_pred CCCCC
Q 008893 108 SGPVP 112 (549)
Q Consensus 108 ~~~~p 112 (549)
++..|
T Consensus 125 ~~~~~ 129 (197)
T 4ezg_A 125 DDSIL 129 (197)
T ss_dssp BGGGH
T ss_pred CcHhH
Confidence 54333
No 342
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.04 E-value=2.9e-10 Score=124.92 Aligned_cols=83 Identities=29% Similarity=0.239 Sum_probs=33.8
Q ss_pred cccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCCCC
Q 008893 30 LQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG 109 (549)
Q Consensus 30 l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 109 (549)
|++|.+++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++
T Consensus 56 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 135 (680)
T 1ziw_A 56 VGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 135 (680)
T ss_dssp CCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccc
Confidence 44444443334444444444444444444442222234444444444444444443333334444444444444444444
Q ss_pred CCC
Q 008893 110 PVP 112 (549)
Q Consensus 110 ~~p 112 (549)
.+|
T Consensus 136 ~~~ 138 (680)
T 1ziw_A 136 TKL 138 (680)
T ss_dssp CCC
T ss_pred cCc
Confidence 333
No 343
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.04 E-value=3.4e-10 Score=115.61 Aligned_cols=123 Identities=20% Similarity=0.118 Sum_probs=98.0
Q ss_pred cccceeeeeeeeeecC---Cc----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSD---GV----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~---~~----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
+++|+.|+|.++...+ .. .....++|++|.+++..|..|+++++|++|+|++|+|+...+..|.++++|+.|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 4688899987765432 11 1233467999999988888999999999999999999944444468999999999
Q ss_pred ccCcccccCCCcccccCCCCceEeccCCCCCCCCCcccc--ccccccCCccc
Q 008893 78 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLI 127 (549)
Q Consensus 78 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~~~ 127 (549)
|++|++++..|..|..+++|+.|++++|.+++.....+. ..+++++|.+.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccc
Confidence 999999988888899999999999999999976544332 45677777664
No 344
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.04 E-value=2.2e-10 Score=126.32 Aligned_cols=97 Identities=29% Similarity=0.365 Sum_probs=86.2
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.|+|++|.|. .+|..+.+|++|++|+|++|.|+ .+|..|.+|++|+.|+|++|+|+ .+|..|..|++|+.|+|++|.
T Consensus 228 ~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 4789999998 78888889999999999999999 89999999999999999999999 889999999999999999999
Q ss_pred CCCCCCcccc-----ccccccCCccc
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
|+.. |..+. ..++|++|.+.
T Consensus 305 l~~l-p~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 305 VTTL-PWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CCCC-CSSTTSCTTCCCEECTTSCCC
T ss_pred CCcc-ChhhhcCCCccEEeCCCCccC
Confidence 9844 54332 56899999885
No 345
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.03 E-value=1.5e-10 Score=114.28 Aligned_cols=123 Identities=19% Similarity=0.146 Sum_probs=90.7
Q ss_pred cccceeeeeeeeeecCC---c----eeehhhhcccCccccc--C--CcccCCCCCCCEEEccCCcCCCCCcc----cccC
Q 008893 5 LEKVLIIVLIQVICSDG---V----FFSFGRLLQNNNISGH--I--PTEIGKLSKLLTLDLSNNFFTGPIPS----TVSH 69 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~---~----~~~~~l~l~~n~l~~~--~--p~~~~~l~~L~~L~ls~N~l~g~~p~----~~~~ 69 (549)
+.+|+.|+|.++..... . .....++|++|++.+. + +..++++++|++|+|++|+|+ .+|. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 66888999987655321 1 1233477999998753 2 233578899999999999997 4444 2577
Q ss_pred CcccCeeeccCcccccCCCcccccC---CCCceEeccCCCCCCCCCccc--cccccccCCcccc
Q 008893 70 LETLQYLRLNNNSLTGAIPPSLSNM---SQLAFLDLSYNNLSGPVPSFH--AKTFNITGNSLIC 128 (549)
Q Consensus 70 l~~L~~L~l~~N~l~g~~p~~~~~l---~~L~~l~l~~N~l~~~~p~~~--~~~~~l~~N~~~~ 128 (549)
+++|+.|+|++|+|++..|..+..+ ++|+.|+|++|.|+..++... .+.+++++|.+..
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCCSCCSCEECCSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhcCCCCEEECCCCcCCC
Confidence 8999999999999998878888777 689999999999995433322 3678899998863
No 346
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.03 E-value=3.7e-10 Score=112.64 Aligned_cols=98 Identities=31% Similarity=0.329 Sum_probs=79.7
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|+++ .+|..+. ++|+.|++++|.
T Consensus 58 ~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~ 134 (332)
T 2ft3_A 58 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNR 134 (332)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSC
T ss_pred EEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCc
Confidence 4678889888777888899999999999999998777888888999999999999988 6776655 788999999999
Q ss_pred CCCCCCcccc-----ccccccCCccc
Q 008893 107 LSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 107 l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
+++.++..+. +.+++++|.+.
T Consensus 135 i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 135 IRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp CCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred cCccCHhHhCCCccCCEEECCCCccc
Confidence 8877765432 55778888774
No 347
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.02 E-value=2.8e-10 Score=125.08 Aligned_cols=114 Identities=20% Similarity=0.205 Sum_probs=96.3
Q ss_pred eeeecCCceeeh---------hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCccccc
Q 008893 15 QVICSDGVFFSF---------GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTG 85 (549)
Q Consensus 15 ~~~c~~~~~~~~---------~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 85 (549)
.+.|+...++.+ .++|++|.|++..+..|+++++|++|+|++|.+++..|..|.++++|+.|+|++|++++
T Consensus 8 ~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 87 (680)
T 1ziw_A 8 VADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ 87 (680)
T ss_dssp EEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCC
T ss_pred eeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCc
Confidence 366765443333 36799999998888889999999999999999999889999999999999999999996
Q ss_pred CCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCcccc
Q 008893 86 AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 128 (549)
Q Consensus 86 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~~ 128 (549)
..+..|.++++|+.|+|++|.+++.+|..+. +.+++++|.+..
T Consensus 88 l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 135 (680)
T 1ziw_A 88 LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 135 (680)
T ss_dssp CCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSC
T ss_pred cChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccc
Confidence 5555799999999999999999988876543 567889988753
No 348
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.02 E-value=2.3e-10 Score=115.26 Aligned_cols=85 Identities=25% Similarity=0.209 Sum_probs=52.5
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|+|++..+..|.++++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|++++|.+
T Consensus 57 L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 136 (353)
T 2z80_A 57 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPY 136 (353)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCC
T ss_pred EECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCC
Confidence 45666666655555666666666666666666655555666666666666666666633333366666666666666666
Q ss_pred CCCCC
Q 008893 108 SGPVP 112 (549)
Q Consensus 108 ~~~~p 112 (549)
++.++
T Consensus 137 ~~l~~ 141 (353)
T 2z80_A 137 KTLGE 141 (353)
T ss_dssp SSSCS
T ss_pred cccCc
Confidence 65443
No 349
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.02 E-value=2.6e-10 Score=128.35 Aligned_cols=125 Identities=21% Similarity=0.132 Sum_probs=88.3
Q ss_pred ccccceeeeeeeeeecC---Cc----eeehhhhcccCcccccC-CcccCCCCCCCEEEccCCcCCCCCcccccCCcccCe
Q 008893 4 LLEKVLIIVLIQVICSD---GV----FFSFGRLLQNNNISGHI-PTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQY 75 (549)
Q Consensus 4 ~~~~~~~~~~~~~~c~~---~~----~~~~~l~l~~n~l~~~~-p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 75 (549)
+..+|+.|+|.++.... .. .....++|++|.+.+.+ |..|++|++|++|+|++|+|++..|..|.++++|+.
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 34677788887655432 11 12223567777655555 667888888888888888888777888888888888
Q ss_pred eeccCcccccCCCcc--cccCCCCceEeccCCCCCCCCCc-cc-----cccccccCCcccc
Q 008893 76 LRLNNNSLTGAIPPS--LSNMSQLAFLDLSYNNLSGPVPS-FH-----AKTFNITGNSLIC 128 (549)
Q Consensus 76 L~l~~N~l~g~~p~~--~~~l~~L~~l~l~~N~l~~~~p~-~~-----~~~~~l~~N~~~~ 128 (549)
|+|++|++++.+|.. |.++++|+.|+|++|.+++..+. .+ .+.+++++|.+..
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 888888888766654 78888888888888888876553 22 2557788887643
No 350
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.02 E-value=3.7e-10 Score=121.22 Aligned_cols=100 Identities=21% Similarity=0.092 Sum_probs=64.0
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|.|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|++++|.+
T Consensus 33 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 112 (570)
T 2z63_A 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112 (570)
T ss_dssp EECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccccc
Confidence 45667777666666677777777777777777655556666677777777777776655556666666677777766666
Q ss_pred CCCCCccc-----cccccccCCccc
Q 008893 108 SGPVPSFH-----AKTFNITGNSLI 127 (549)
Q Consensus 108 ~~~~p~~~-----~~~~~l~~N~~~ 127 (549)
++..+..+ .+.+++++|.+.
T Consensus 113 ~~l~~~~~~~l~~L~~L~L~~n~l~ 137 (570)
T 2z63_A 113 ASLENFPIGHLKTLKELNVAHNLIQ 137 (570)
T ss_dssp CCSTTCSCTTCTTCCEEECCSSCCC
T ss_pred ccCCCccccccccccEEecCCCccc
Confidence 65544222 244566666553
No 351
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.01 E-value=2.3e-10 Score=122.34 Aligned_cols=99 Identities=21% Similarity=0.176 Sum_probs=70.8
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|+|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|.
T Consensus 30 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 109 (549)
T 2z81_A 30 SLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNP 109 (549)
T ss_dssp EEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCC
T ss_pred EEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCc
Confidence 35677777777777777778888888888888777666777777888888888888776666667777788888888887
Q ss_pred CCCC-CCccc-----cccccccCCc
Q 008893 107 LSGP-VPSFH-----AKTFNITGNS 125 (549)
Q Consensus 107 l~~~-~p~~~-----~~~~~l~~N~ 125 (549)
+++. .|..+ .+.+++++|.
T Consensus 110 l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 110 YQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp CSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred ccccchhhhhhccCCccEEECCCCc
Confidence 7753 33322 2455666665
No 352
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.01 E-value=1.3e-10 Score=114.83 Aligned_cols=81 Identities=15% Similarity=0.088 Sum_probs=36.6
Q ss_pred hhcccCcccccCC----cccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccC--C--CcccccCCCCce
Q 008893 28 RLLQNNNISGHIP----TEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGA--I--PPSLSNMSQLAF 99 (549)
Q Consensus 28 l~l~~n~l~~~~p----~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--~--p~~~~~l~~L~~ 99 (549)
++|++|.+++..| ..+..+++|++|+|++|++++..|..|..+++|++|+|++|++.+. + +..+..+++|+.
T Consensus 122 L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~ 201 (310)
T 4glp_A 122 LRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQN 201 (310)
T ss_dssp CEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCS
T ss_pred EEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCE
Confidence 4455555554333 2233445555555555555544444455555555555555554321 1 111234444444
Q ss_pred EeccCCCCC
Q 008893 100 LDLSYNNLS 108 (549)
Q Consensus 100 l~l~~N~l~ 108 (549)
|+|++|.++
T Consensus 202 L~Ls~N~l~ 210 (310)
T 4glp_A 202 LALRNTGME 210 (310)
T ss_dssp CBCCSSCCC
T ss_pred EECCCCCCC
Confidence 444444443
No 353
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.01 E-value=3.5e-10 Score=111.41 Aligned_cols=187 Identities=19% Similarity=0.186 Sum_probs=122.8
Q ss_pred CCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-CCC--ccceEEEEecCC---ceeeEeec
Q 008893 232 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRN--LLRLIGFCMTTT---ERLLVYPY 305 (549)
Q Consensus 232 ~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~ 305 (549)
.+.++.|.+..||+.. ..+++|+.... .....+..|..+++.+. +.. +.+++....... ..++||+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4678999999999863 45888886432 22456889999998873 333 334444433332 34789999
Q ss_pred cCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc------------------------------------------
Q 008893 306 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ------------------------------------------ 343 (549)
Q Consensus 306 ~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------------ 343 (549)
++|.++.+... ..++..++..++.+++..+..||+.
T Consensus 98 i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 98 IKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred cCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99988865433 2467778888888888888888861
Q ss_pred -------------CCCceEecccCcCeeeecC--CCceEEeecccccccCCCCCcee-------------eccccccCcc
Q 008893 344 -------------CDPKIIHRDVKAANILLDE--YYEAVVGDFGLAKLLDHCDSHVT-------------TAVRGTVGHI 395 (549)
Q Consensus 344 -------------~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~-------------~~~~gt~~y~ 395 (549)
..+.++|+|++|.||++++ ...+.|+||+.+........... .......++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 1246899999999999998 55678999999865432100000 0000011122
Q ss_pred C-chhhccCCCCCcccchhHhHHHHHHHhCCcccc
Q 008893 396 A-PEYLSTGQSSEKTDVFGFGILLLELISGLRALE 429 (549)
Q Consensus 396 a-PE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~ 429 (549)
. |+..... ....+.|++|.++|.+.+|..++.
T Consensus 256 ~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 2 2222111 123589999999999999987764
No 354
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.01 E-value=3.7e-10 Score=101.64 Aligned_cols=104 Identities=20% Similarity=0.107 Sum_probs=80.4
Q ss_pred ccceeeeeeeeeecC-----Cce-eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 6 EKVLIIVLIQVICSD-----GVF-FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~-----~~~-~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
.+|+.|++.++.... ... ....++|++|.|++. +.|+++++|++|+|++|+|++..|..|..+++|+.|+|+
T Consensus 19 ~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 96 (176)
T ss_dssp TSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECC
Confidence 466777776665432 111 334467999999975 678999999999999999995544555889999999999
Q ss_pred CcccccCCCc--ccccCCCCceEeccCCCCCCCCC
Q 008893 80 NNSLTGAIPP--SLSNMSQLAFLDLSYNNLSGPVP 112 (549)
Q Consensus 80 ~N~l~g~~p~--~~~~l~~L~~l~l~~N~l~~~~p 112 (549)
+|+|+ .+|. .+..+++|+.|++++|.++..++
T Consensus 97 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~ 130 (176)
T 1a9n_A 97 NNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKH 130 (176)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTT
T ss_pred CCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHh
Confidence 99997 6776 78899999999999999985543
No 355
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.01 E-value=3.4e-10 Score=121.51 Aligned_cols=97 Identities=27% Similarity=0.272 Sum_probs=65.5
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|.|++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|+.|+|++|.+
T Consensus 57 L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l 133 (562)
T 3a79_B 57 LSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDF 133 (562)
T ss_dssp EECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCC
T ss_pred EECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCc
Confidence 557777777666667777777777777777777666777777777777777777777 55655 677777777777777
Q ss_pred CCC-CCcccc-----ccccccCCccc
Q 008893 108 SGP-VPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 108 ~~~-~p~~~~-----~~~~l~~N~~~ 127 (549)
++. +|..+. +.+++++|.+.
T Consensus 134 ~~l~~p~~~~~l~~L~~L~L~~n~l~ 159 (562)
T 3a79_B 134 DVLPVCKEFGNLTKLTFLGLSAAKFR 159 (562)
T ss_dssp SBCCCCGGGGGCTTCCEEEEECSBCC
T ss_pred cccCchHhhcccCcccEEecCCCccc
Confidence 663 333332 45666666653
No 356
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.00 E-value=3.8e-10 Score=119.84 Aligned_cols=102 Identities=23% Similarity=0.250 Sum_probs=83.3
Q ss_pred hhhhcccCcccccCCcccCCCCCCCEEEccCCcCCC--CCcccccCCcccCeeeccCcccccCCCcc-cccCCCCceEec
Q 008893 26 FGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTG--PIPSTVSHLETLQYLRLNNNSLTGAIPPS-LSNMSQLAFLDL 102 (549)
Q Consensus 26 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~l~l 102 (549)
..++|++|++++.+|..++++++|++|+|++|++++ .+|..+..+++|+.|+|++|++++.+|.. +..+++|+.|++
T Consensus 327 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L 406 (520)
T 2z7x_B 327 LHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNM 406 (520)
T ss_dssp CEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEEC
T ss_pred cEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEEC
Confidence 346788999988888888999999999999999986 56677888999999999999998756654 778888999999
Q ss_pred cCCCCCCCCCccc---cccccccCCccc
Q 008893 103 SYNNLSGPVPSFH---AKTFNITGNSLI 127 (549)
Q Consensus 103 ~~N~l~~~~p~~~---~~~~~l~~N~~~ 127 (549)
++|.+++..|..+ .+.+++++|.+.
T Consensus 407 s~N~l~~~~~~~l~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 407 SSNILTDTIFRCLPPRIKVLDLHSNKIK 434 (520)
T ss_dssp CSSCCCGGGGGSCCTTCCEEECCSSCCC
T ss_pred cCCCCCcchhhhhcccCCEEECCCCccc
Confidence 9999887776543 366788888775
No 357
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.99 E-value=3e-10 Score=112.53 Aligned_cols=99 Identities=26% Similarity=0.240 Sum_probs=62.5
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc-CCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS-HLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.++|++|++++..|..++++++|++|+|++|.+++..|..+. .+++|+.|+|++|+|++. |. ...+++|+.|+|++|
T Consensus 124 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N 201 (317)
T 3o53_A 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSN 201 (317)
T ss_dssp EEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSS
T ss_pred EEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCC
Confidence 356777777766666777777777777777777765555553 567777777777777643 32 234666777777777
Q ss_pred CCCCCCCccc----cccccccCCccc
Q 008893 106 NLSGPVPSFH----AKTFNITGNSLI 127 (549)
Q Consensus 106 ~l~~~~p~~~----~~~~~l~~N~~~ 127 (549)
.|++.++.+. ...+++++|.+.
T Consensus 202 ~l~~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 202 KLAFMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred cCCcchhhhcccCcccEEECcCCccc
Confidence 7766554421 145566666664
No 358
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.98 E-value=5.6e-10 Score=111.20 Aligned_cols=97 Identities=27% Similarity=0.282 Sum_probs=73.0
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|+|++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|+|+ .+|..+. ++|+.|++++|.+
T Consensus 57 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l 133 (330)
T 1xku_A 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEI 133 (330)
T ss_dssp EECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCC
T ss_pred EECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcc
Confidence 568888888777777888888888888888888777888888888888888888887 6666554 6788888888888
Q ss_pred CCCCCcccc-----ccccccCCccc
Q 008893 108 SGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 108 ~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
++..+..+. ..+++++|.+.
T Consensus 134 ~~~~~~~~~~l~~L~~L~l~~n~l~ 158 (330)
T 1xku_A 134 TKVRKSVFNGLNQMIVVELGTNPLK 158 (330)
T ss_dssp CBBCHHHHTTCTTCCEEECCSSCCC
T ss_pred cccCHhHhcCCccccEEECCCCcCC
Confidence 776654332 45677777663
No 359
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.98 E-value=2.7e-10 Score=107.90 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=79.7
Q ss_pred hhhhcccCcccccCCcccCCCCCCCEEEccCCc-CCCCCcccccCCcccCeeeccC-cccccCCCcccccCCCCceEecc
Q 008893 26 FGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNF-FTGPIPSTVSHLETLQYLRLNN-NSLTGAIPPSLSNMSQLAFLDLS 103 (549)
Q Consensus 26 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~l~l~ 103 (549)
..++|++|+|++..+..|.++++|++|+|++|+ +++..+..|.++++|+.|+|++ |+|++..+..|.++++|+.|+++
T Consensus 34 ~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~ 113 (239)
T 2xwt_C 34 QTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIF 113 (239)
T ss_dssp CEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEE
T ss_pred cEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCC
Confidence 346788999987777788899999999999996 8855566888899999999998 89987666788889999999999
Q ss_pred CCCCCCCCCccc----cc---cccccCC-ccc
Q 008893 104 YNNLSGPVPSFH----AK---TFNITGN-SLI 127 (549)
Q Consensus 104 ~N~l~~~~p~~~----~~---~~~l~~N-~~~ 127 (549)
+|.+++. |.+. .. .+++++| .+.
T Consensus 114 ~n~l~~l-p~~~~l~~L~~L~~L~l~~N~~l~ 144 (239)
T 2xwt_C 114 NTGLKMF-PDLTKVYSTDIFFILEITDNPYMT 144 (239)
T ss_dssp EECCCSC-CCCTTCCBCCSEEEEEEESCTTCC
T ss_pred CCCCccc-cccccccccccccEEECCCCcchh
Confidence 9998874 4321 13 6777887 553
No 360
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.98 E-value=3.3e-10 Score=114.03 Aligned_cols=122 Identities=20% Similarity=0.208 Sum_probs=96.4
Q ss_pred cccceeeeeeeeeecC-------CceeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSD-------GVFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~-------~~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
.++|+.|++.++.... +-.....++|++|.|++..|..|+++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 3578888887665432 111233467999999998899999999999999999999965555599999999999
Q ss_pred ccCcccccCCCc--ccccCCCCceEeccCCC-CCCCCCcccc-----ccccccCCccc
Q 008893 78 LNNNSLTGAIPP--SLSNMSQLAFLDLSYNN-LSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 78 l~~N~l~g~~p~--~~~~l~~L~~l~l~~N~-l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
|++|+++ .+|. .|..+++|+.|++++|. +++..+..+. +.+++++|.+.
T Consensus 131 L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 131 LLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 9999999 4554 78999999999999994 6666555443 56788888774
No 361
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.97 E-value=3.2e-10 Score=121.21 Aligned_cols=123 Identities=20% Similarity=0.156 Sum_probs=98.8
Q ss_pred cccceeeeeeeeeecC---Cc----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeee
Q 008893 5 LEKVLIIVLIQVICSD---GV----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 77 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~---~~----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 77 (549)
.++|+.|+|.++.... .. .....++|++|+|++..|..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 25 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 104 (549)
T 2z81_A 25 TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 104 (549)
T ss_dssp CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEE
T ss_pred CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEE
Confidence 3678899998775532 11 1233477999999998899999999999999999999987777799999999999
Q ss_pred ccCccccc-CCCcccccCCCCceEeccCCCCCCCCC-cccc-----ccccccCCccc
Q 008893 78 LNNNSLTG-AIPPSLSNMSQLAFLDLSYNNLSGPVP-SFHA-----KTFNITGNSLI 127 (549)
Q Consensus 78 l~~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~~~~p-~~~~-----~~~~l~~N~~~ 127 (549)
|++|++++ ..|..|.++++|+.|++++|.+.+.+| ..+. +.+++++|.+.
T Consensus 105 Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 105 LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 99999986 467789999999999999999655554 3332 56778888764
No 362
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.96 E-value=3.8e-10 Score=106.91 Aligned_cols=120 Identities=16% Similarity=0.170 Sum_probs=89.4
Q ss_pred ccceeeeeeeeeecC---Cc----eeehhhhcccCc-ccccCCcccCCCCCCCEEEccC-CcCCCCCcccccCCcccCee
Q 008893 6 EKVLIIVLIQVICSD---GV----FFSFGRLLQNNN-ISGHIPTEIGKLSKLLTLDLSN-NFFTGPIPSTVSHLETLQYL 76 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~---~~----~~~~~l~l~~n~-l~~~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L 76 (549)
.+|+.|++.++.... .. .....++|++|. +++..+..|.++++|++|+|++ |+|++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 467777776655431 11 123346788886 8866677888999999999998 88886666788889999999
Q ss_pred eccCcccccCCCcccccCCCCc---eEeccCC-CCCCCCCcccc-----c-cccccCCccc
Q 008893 77 RLNNNSLTGAIPPSLSNMSQLA---FLDLSYN-NLSGPVPSFHA-----K-TFNITGNSLI 127 (549)
Q Consensus 77 ~l~~N~l~g~~p~~~~~l~~L~---~l~l~~N-~l~~~~p~~~~-----~-~~~l~~N~~~ 127 (549)
+|++|++++ +|. |..+++|+ .|++++| .+++.++..+. + .+++++|.+.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 999999885 776 78888887 9999999 88877765443 4 6777788764
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.90 E-value=1.3e-09 Score=106.48 Aligned_cols=118 Identities=26% Similarity=0.286 Sum_probs=87.7
Q ss_pred cccceeeeeeeeeecCCc-----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDGV-----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+++|+.|+|.++...+-. .....++|++|.+++ +| .+.++++|++|+|++|++++ + +.+..+++|+.|+|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 142 (291)
T ss_dssp CTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECC
T ss_pred CCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEcc
Confidence 577888888776654321 112236688999885 33 48899999999999999985 4 468888999999999
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCcc---ccccccccCCcccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLIC 128 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~~ 128 (549)
+|++++. ..+..+++|+.|++++|.+++..|-. ....+++++|.+..
T Consensus 143 ~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 143 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred CCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC
Confidence 9999854 57888899999999999998876621 12567888887753
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.90 E-value=2.4e-09 Score=104.61 Aligned_cols=117 Identities=21% Similarity=0.235 Sum_probs=90.4
Q ss_pred cccceeeeeeeeeecCC-c----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDG-V----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~-~----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+++|+.|++.+....+- . .....++|++|++++..| +.++++|++|+|++|++++ +| .+..+++|+.|+|+
T Consensus 45 l~~L~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp HHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cCcccEEEccCCCcccChhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 45677777766544321 1 123346799999996554 9999999999999999995 44 59999999999999
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCcc----ccccccccCCcccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF----HAKTFNITGNSLIC 128 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~----~~~~~~l~~N~~~~ 128 (549)
+|+|++ + +.+..+++|+.|++++|.+++. +.. ....+++++|.+..
T Consensus 121 ~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 121 HNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp TSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC
T ss_pred CCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCcccc
Confidence 999995 4 5689999999999999999986 322 12678899998753
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.90 E-value=1.2e-09 Score=107.81 Aligned_cols=118 Identities=25% Similarity=0.266 Sum_probs=84.9
Q ss_pred cccceeeeeeeeeecCCc-----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDGV-----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+.+|+.|+|.++...+-. .....++|++|.|++. |. +.++++|++|+|++|++++ +|. +..+++|+.|+|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~ 159 (308)
T 1h6u_A 84 LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIG 159 (308)
T ss_dssp CCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECC
T ss_pred CCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEcc
Confidence 567888888776654311 1222366888988853 43 8888999999999998885 443 8888888999999
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCcc---ccccccccCCcccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLIC 128 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~~ 128 (549)
+|++++ ++. +..+++|+.|++++|.+++..+-. ....+++++|.+..
T Consensus 160 ~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~ 209 (308)
T 1h6u_A 160 NAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISD 209 (308)
T ss_dssp SSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCB
T ss_pred CCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCc
Confidence 888884 444 888888888888888888766521 12567788887753
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.88 E-value=2.1e-09 Score=103.40 Aligned_cols=93 Identities=27% Similarity=0.360 Sum_probs=52.9
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|+|++..| +.++++|++|+|++|+|++ +|.. .. ++|+.|+|++|+|++ +| .+..+++|+.|+|++|.|
T Consensus 68 L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 68 LHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKL 140 (263)
T ss_dssp EECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCC
T ss_pred EECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcC
Confidence 4566666664333 6666666666666666663 3332 22 666666666666663 33 466666666666666666
Q ss_pred CCCCCcc---ccccccccCCccc
Q 008893 108 SGPVPSF---HAKTFNITGNSLI 127 (549)
Q Consensus 108 ~~~~p~~---~~~~~~l~~N~~~ 127 (549)
++..+-. ....+++++|.+.
T Consensus 141 ~~~~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 141 KSIVMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CBCGGGGGCTTCCEEECTTSCCC
T ss_pred CCChHHccCCCCCEEECCCCcCc
Confidence 6542110 1144566666654
No 367
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.88 E-value=7.7e-10 Score=109.58 Aligned_cols=121 Identities=21% Similarity=0.105 Sum_probs=87.7
Q ss_pred cccceeeeeeeeeecCC--ceeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcc
Q 008893 5 LEKVLIIVLIQVICSDG--VFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 82 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~--~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 82 (549)
+.+|+.|++.++....- ......+++++|+|++..+.. +++|+.|+|++|++++..|..+..+++|+.|+|++|+
T Consensus 79 l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (317)
T 3o53_A 79 LSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (317)
T ss_dssp CTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSC
T ss_pred cCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCC
Confidence 46777888876655320 012234668888888665543 5778899999999987777788888999999999999
Q ss_pred cccCCCcccc-cCCCCceEeccCCCCCCCCCccc---cccccccCCcccc
Q 008893 83 LTGAIPPSLS-NMSQLAFLDLSYNNLSGPVPSFH---AKTFNITGNSLIC 128 (549)
Q Consensus 83 l~g~~p~~~~-~l~~L~~l~l~~N~l~~~~p~~~---~~~~~l~~N~~~~ 128 (549)
+++..|..+. .+++|+.|+|++|.+++..+... ...+++++|.+..
T Consensus 156 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~ 205 (317)
T 3o53_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF 205 (317)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE
T ss_pred CCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc
Confidence 8877676664 68889999999998886643322 2567888887753
No 368
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.88 E-value=2.7e-09 Score=105.21 Aligned_cols=119 Identities=23% Similarity=0.288 Sum_probs=93.5
Q ss_pred ccccceeeeeeeeeecCCc-----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeec
Q 008893 4 LLEKVLIIVLIQVICSDGV-----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 78 (549)
Q Consensus 4 ~~~~~~~~~~~~~~c~~~~-----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 78 (549)
-+++|+.|+|.++...+-. .....++|++|.+++. | .+.++++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 61 ~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 61 YLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp GCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred ccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 3578899999877654311 1233467999999853 3 79999999999999999995 554 999999999999
Q ss_pred cCcccccCCCcccccCCCCceEeccCCCCCCCCCcc---ccccccccCCcccc
Q 008893 79 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLIC 128 (549)
Q Consensus 79 ~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~~ 128 (549)
++|++++. +. +..+++|+.|++++|.+++..+-. ....+++++|.+..
T Consensus 137 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 137 DLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred CCCccCcC-cc-ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCc
Confidence 99999954 44 899999999999999999866511 12567899998753
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.87 E-value=2.1e-09 Score=107.76 Aligned_cols=118 Identities=25% Similarity=0.266 Sum_probs=78.3
Q ss_pred cccceeeeeeeeeecCCc-----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDGV-----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+++|+.+++.++...+.. .....++|++|.+++..+ +..+++|++|+|++|.+++ + +.+..+++|+.|+|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~ 273 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVG 273 (347)
T ss_dssp CTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECC
T ss_pred CCccceeecccCCCCCCchhhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEcc
Confidence 456666666655443211 112235678888774433 7788888888888888874 3 357778888888888
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCccc-----cccccccCCcccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH-----AKTFNITGNSLIC 128 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~-----~~~~~l~~N~~~~ 128 (549)
+|++++ + +.+..+++|+.|++++|.+++..|..+ .+.+++++|++..
T Consensus 274 ~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 274 SNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp SSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred CCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 888874 3 357777888888888888877665532 2556777777653
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.86 E-value=3.7e-09 Score=101.64 Aligned_cols=117 Identities=22% Similarity=0.233 Sum_probs=91.1
Q ss_pred cccceeeeeeeeeecCCc-----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDGV-----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+.+|+.|+|.++..++-. .....++|++|+|++ +|+. .. ++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp CTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 567888888877665421 123346799999996 4443 33 999999999999995 44 69999999999999
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCcc----ccccccccCCccccC
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF----HAKTFNITGNSLICA 129 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~----~~~~~~l~~N~~~~~ 129 (549)
+|+|++ +| .+..+++|+.|+|++|.+++. +.. ....+++++|++.+.
T Consensus 137 ~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 137 NNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 999995 45 699999999999999999987 322 125688999998755
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.86 E-value=2.7e-09 Score=114.82 Aligned_cols=117 Identities=27% Similarity=0.315 Sum_probs=79.9
Q ss_pred cccceeeeeeeeeecCCc-e----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDGV-F----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+.+|+.|+|.++..++-. + ....|+|++|.|++ +| .|.+|++|+.|+|++|+|++ + +.+..|++|+.|+|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls 139 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 139 (605)
T ss_dssp CTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECC
T ss_pred CCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECC
Confidence 567788888766554311 1 12235688888874 33 67888888888888888884 3 357778888888888
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCcc---ccccccccCCccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLI 127 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~ 127 (549)
+|+|++. ..|..+++|+.|+|++|.|++.+|-. ....++|++|.+.
T Consensus 140 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 140 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp SSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred CCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCC
Confidence 8888754 56777888888888888887776621 1245677777664
No 372
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.85 E-value=2e-09 Score=108.16 Aligned_cols=101 Identities=15% Similarity=0.153 Sum_probs=81.7
Q ss_pred eeeecCCceeehh---------hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcc-cccCCcccCe-eeccCccc
Q 008893 15 QVICSDGVFFSFG---------RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS-TVSHLETLQY-LRLNNNSL 83 (549)
Q Consensus 15 ~~~c~~~~~~~~~---------l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~-L~l~~N~l 83 (549)
.|.|++..++.+| ++|++|+|+...+..|.+|++|++|+|++|++.+.+|. .|.+|++|+. +.++.|+|
T Consensus 13 ~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l 92 (350)
T 4ay9_X 13 VFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNL 92 (350)
T ss_dssp EEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTC
T ss_pred EEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcc
Confidence 4678776555544 57899999966667899999999999999998766664 6788988775 66678999
Q ss_pred ccCCCcccccCCCCceEeccCCCCCCCCCccc
Q 008893 84 TGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH 115 (549)
Q Consensus 84 ~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~ 115 (549)
++..|..|..+++|+.|++++|.|++.++..+
T Consensus 93 ~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 93 LYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 124 (350)
T ss_dssp CEECTTSBCCCTTCCEEEEEEECCSSCCCCTT
T ss_pred cccCchhhhhccccccccccccccccCCchhh
Confidence 97778889999999999999999987776544
No 373
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.83 E-value=4.4e-09 Score=113.13 Aligned_cols=93 Identities=24% Similarity=0.364 Sum_probs=59.9
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
|+|++|.|++..| +.+|++|+.|+|++|.|++ +| .+..|++|+.|+|++|+|++ + +.+..+++|+.|+|++|.|
T Consensus 70 L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l 143 (605)
T 1m9s_A 70 LFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKI 143 (605)
T ss_dssp EECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCC
T ss_pred EEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCcc
Confidence 5577777775443 6777777777777777763 33 56777777777777777764 3 3466777777777777777
Q ss_pred CCCCCcc----ccccccccCCccc
Q 008893 108 SGPVPSF----HAKTFNITGNSLI 127 (549)
Q Consensus 108 ~~~~p~~----~~~~~~l~~N~~~ 127 (549)
++. +.. ....++|++|.+.
T Consensus 144 ~~l-~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 144 TDI-TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp CCC-GGGGSCTTCSEEECCSSCCC
T ss_pred CCc-hhhcccCCCCEEECcCCcCC
Confidence 765 221 1245666666664
No 374
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.82 E-value=1.1e-10 Score=107.39 Aligned_cols=99 Identities=22% Similarity=0.311 Sum_probs=76.8
Q ss_pred ehhhhcccCcccccCCc------ccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCc
Q 008893 25 SFGRLLQNNNISGHIPT------EIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLA 98 (549)
Q Consensus 25 ~~~l~l~~n~l~~~~p~------~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 98 (549)
+..++|+.|.++|.+|. .|+++++|++|+|++|+|++ +| .+..+++|+.|+|++|+|+ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 34466788888888776 78888888888888888885 67 7888888888888888888 7787777788888
Q ss_pred eEeccCCCCCCCCCcc----ccccccccCCccc
Q 008893 99 FLDLSYNNLSGPVPSF----HAKTFNITGNSLI 127 (549)
Q Consensus 99 ~l~l~~N~l~~~~p~~----~~~~~~l~~N~~~ 127 (549)
.|+|++|.+++. |.. ....+++++|.+.
T Consensus 97 ~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 97 ELWISYNQIASL-SGIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp EEEEEEEECCCH-HHHHHHHHSSEEEESEEECC
T ss_pred EEECcCCcCCcC-CccccCCCCCEEECCCCcCC
Confidence 888888888874 322 1256777887764
No 375
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.79 E-value=1.3e-08 Score=108.49 Aligned_cols=108 Identities=19% Similarity=0.218 Sum_probs=69.4
Q ss_pred cceeeeeeeeeecCCc----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcc
Q 008893 7 KVLIIVLIQVICSDGV----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 82 (549)
Q Consensus 7 ~~~~~~~~~~~c~~~~----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 82 (549)
+|+.|+|.++....-. .....++|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|+.|+|++|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~ 131 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQ 131 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSC
T ss_pred CccEEEeCCCCCCccCHhHcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCc
Confidence 6677777665553210 12334567788877 566 446778888888888875 666 554 77777777777
Q ss_pred cccCCCcccccCCCCceEeccCCCCCCCCCccc--cccccccCCccc
Q 008893 83 LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH--AKTFNITGNSLI 127 (549)
Q Consensus 83 l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~--~~~~~l~~N~~~ 127 (549)
|++ +|. .+++|+.|+|++|.|++.++ .+ ...+++++|.+.
T Consensus 132 l~~-lp~---~l~~L~~L~Ls~N~l~~lp~-~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 132 LTM-LPE---LPALLEYINADNNQLTMLPE-LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp CSC-CCC---CCTTCCEEECCSSCCSCCCC-CCTTCCEEECCSSCCS
T ss_pred CCC-CCC---cCccccEEeCCCCccCcCCC-cCCCcCEEECCCCCCC
Confidence 775 555 56777777777777776333 22 245667777664
No 376
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.79 E-value=1.1e-08 Score=109.02 Aligned_cols=109 Identities=23% Similarity=0.264 Sum_probs=65.0
Q ss_pred ccceeeeeeeeeecCCc---eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcc
Q 008893 6 EKVLIIVLIQVICSDGV---FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 82 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~~~---~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 82 (549)
++|+.|+|.++....-. .....++|++|+|++ +|. |.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+
T Consensus 80 ~~L~~L~Ls~N~l~~ip~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 151 (571)
T 3cvr_A 80 PQITVLEITQNALISLPELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQ 151 (571)
T ss_dssp TTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred CCCCEEECcCCCCcccccccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCc
Confidence 56677777665553210 112235677777775 555 554 67777777777774 555 46677777777777
Q ss_pred cccCCCcccccCCCCceEeccCCCCCCCCCccc--cccccccCCccc
Q 008893 83 LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH--AKTFNITGNSLI 127 (549)
Q Consensus 83 l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~--~~~~~l~~N~~~ 127 (549)
|++ +|. .+++|+.|+|++|.|++. |.+. ...+++++|.+.
T Consensus 152 l~~-lp~---~l~~L~~L~Ls~N~L~~l-p~l~~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 152 LTM-LPE---LPTSLEVLSVRNNQLTFL-PELPESLEALDVSTNLLE 193 (571)
T ss_dssp CSC-CCC---CCTTCCEEECCSSCCSCC-CCCCTTCCEEECCSSCCS
T ss_pred cCc-CCC---cCCCcCEEECCCCCCCCc-chhhCCCCEEECcCCCCC
Confidence 764 554 456677777777777663 3321 244566666664
No 377
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.74 E-value=1e-08 Score=107.29 Aligned_cols=100 Identities=27% Similarity=0.301 Sum_probs=57.2
Q ss_pred cccceeeeeeeeeecCCc-----eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDGV-----FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-----~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+.+|+.|++.++...+-. .....++|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317 (466)
T ss_dssp CTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECC
T ss_pred CCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECc
Confidence 456666776655443211 112234566776664433 6666666666666666664322 5666666666666
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCC
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP 110 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 110 (549)
+|++++..| +..+++|+.|++++|.+++.
T Consensus 318 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 318 FNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp SSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 666665443 55666666666666666554
No 378
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.74 E-value=9.8e-11 Score=107.65 Aligned_cols=98 Identities=21% Similarity=0.299 Sum_probs=83.2
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNN 106 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 106 (549)
.++|++|.|++ +| .+.++++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +| .+..+++|+.|++++|.
T Consensus 52 ~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~ 126 (198)
T 1ds9_A 52 HLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNK 126 (198)
T ss_dssp EEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEE
T ss_pred EEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCc
Confidence 46799999996 77 8999999999999999999 789888889999999999999995 56 68899999999999999
Q ss_pred CCCCCC-cc-----ccccccccCCccccC
Q 008893 107 LSGPVP-SF-----HAKTFNITGNSLICA 129 (549)
Q Consensus 107 l~~~~p-~~-----~~~~~~l~~N~~~~~ 129 (549)
+++..+ .. ....+++++|++.|.
T Consensus 127 i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 127 ITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp CCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 987543 11 236788999988654
No 379
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.72 E-value=1.2e-08 Score=102.09 Aligned_cols=116 Identities=19% Similarity=0.308 Sum_probs=83.1
Q ss_pred cccceeeeeeeeeecCCc-e----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSDGV-F----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+++|+.|++.++...+-. + ....+++++|.+++..+ +..+++|+.|+|++|++++ +|. +..+++|+.|+|+
T Consensus 176 l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIG 251 (347)
T ss_dssp CTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECC
T ss_pred CCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECC
Confidence 467777877765543311 1 11225688888885544 8888899999999999884 444 8888999999999
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCcc----ccccccccCCccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF----HAKTFNITGNSLI 127 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~----~~~~~~l~~N~~~ 127 (549)
+|++++ + +.+..+++|+.|++++|.+++. +.. ..+.+++++|.+.
T Consensus 252 ~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 252 TNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp SSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC
T ss_pred CCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCC
Confidence 998884 3 4688888999999999988875 321 1256788888774
No 380
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.69 E-value=2.1e-08 Score=104.83 Aligned_cols=78 Identities=37% Similarity=0.550 Sum_probs=36.2
Q ss_pred hcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCCC
Q 008893 29 LLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLS 108 (549)
Q Consensus 29 ~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 108 (549)
+|++|.+++..| +.++++|+.|+|++|++++. |. +..+++|+.|+|++|++++..| +..+++|+.|++++|.++
T Consensus 249 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~ 322 (466)
T 1o6v_A 249 DLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS 322 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCS
T ss_pred ECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCC
Confidence 344444443322 44445555555555554432 22 4445555555555555543222 445555555555555555
Q ss_pred CCCC
Q 008893 109 GPVP 112 (549)
Q Consensus 109 ~~~p 112 (549)
+..|
T Consensus 323 ~~~~ 326 (466)
T 1o6v_A 323 DISP 326 (466)
T ss_dssp CCGG
T ss_pred Cchh
Confidence 4443
No 381
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.67 E-value=4.9e-08 Score=101.56 Aligned_cols=114 Identities=19% Similarity=0.214 Sum_probs=70.3
Q ss_pred ccceeeeeeeeeecC--Cc-eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcc
Q 008893 6 EKVLIIVLIQVICSD--GV-FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 82 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~--~~-~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 82 (549)
.+|+.|++.++.... .. .....++|++|++++ +| +|+++++|++|+|++|++++ +|..+ ++|+.|+|++|+
T Consensus 111 ~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~ 184 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQ 184 (454)
T ss_dssp TTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSC
T ss_pred CCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCc
Confidence 445555555443322 00 122345677777775 66 47777777777777777774 55443 477777777777
Q ss_pred cccCCCcccccCCCCceEeccCCCCCCCCCcc-ccccccccCCccc
Q 008893 83 LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF-HAKTFNITGNSLI 127 (549)
Q Consensus 83 l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~l~~N~~~ 127 (549)
+++ +| .|.++++|+.|++++|.+++.+... ..+.+++++|.+.
T Consensus 185 l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 185 LEE-LP-ELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILE 228 (454)
T ss_dssp CSS-CC-CCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCS
T ss_pred CCc-Cc-cccCCCCCCEEECCCCcCCcCCCCcCcccEEECcCCcCC
Confidence 774 55 4777777777777777777632211 2355677777664
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.65 E-value=5.1e-08 Score=101.50 Aligned_cols=115 Identities=23% Similarity=0.147 Sum_probs=69.5
Q ss_pred cccceeeeeeeeeecCCce----eehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccC
Q 008893 5 LEKVLIIVLIQVICSDGVF----FSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 80 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~~----~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 80 (549)
+++|+.|++.++..+.-.+ ....+++++|...+.+ .++.+++|+.|+|++|+|++ +| +..+++|+.|+|++
T Consensus 126 l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~ 200 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDT 200 (457)
T ss_dssp CTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCS
T ss_pred CCcCCEEECCCCccceeccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcC
Confidence 4566777776554433111 1122456677555455 36677777777777777774 44 66777777777777
Q ss_pred cccccCCCcccccCCCCceEeccCCCCCCCCCcc--ccccccccCCccc
Q 008893 81 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF--HAKTFNITGNSLI 127 (549)
Q Consensus 81 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~~~l~~N~~~ 127 (549)
|+|++. .+..+++|+.|++++|++++.+... ....+++++|.+.
T Consensus 201 N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 201 NNITKL---DLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp SCCSCC---CCTTCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCS
T ss_pred CcCCee---ccccCCCCCEEECcCCcccccCccccCCCCEEEeeCCcCC
Confidence 777743 2667777777777777777632111 1245667777664
No 383
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.62 E-value=4.7e-08 Score=101.75 Aligned_cols=102 Identities=19% Similarity=0.084 Sum_probs=80.7
Q ss_pred cccceeeeeeeeeecC-----CceeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeecc
Q 008893 5 LEKVLIIVLIQVICSD-----GVFFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 79 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~-----~~~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 79 (549)
+++|+.|++.++.... .-.....++|++|+|++ +| ++.+++|+.|+|++|+|++. .+..+++|+.|+|+
T Consensus 147 l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls 220 (457)
T 3bz5_A 147 NTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCS 220 (457)
T ss_dssp CTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECC
T ss_pred CCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECc
Confidence 4567777776652211 11123346799999996 55 89999999999999999964 38999999999999
Q ss_pred CcccccCCCcccccCCCCceEeccCCCCCCCCCccc
Q 008893 80 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH 115 (549)
Q Consensus 80 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~ 115 (549)
+|+|++ +| +..+++|+.|++++|.+++.++..+
T Consensus 221 ~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l 253 (457)
T 3bz5_A 221 SNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTL 253 (457)
T ss_dssp SSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTC
T ss_pred CCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHC
Confidence 999996 66 8899999999999999999876543
No 384
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.62 E-value=2.4e-07 Score=91.66 Aligned_cols=137 Identities=18% Similarity=0.199 Sum_probs=101.2
Q ss_pred CCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccC----CCccceEEEEecCCceeeEe
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH----RNLLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv~ 303 (549)
.....+.++.|....||+. |+.+++|+..... ....+..|..++..+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 5566778999999999998 6678888764321 13458899998888865 223455554 5679999
Q ss_pred eccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcC---------------------------------------
Q 008893 304 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC--------------------------------------- 344 (549)
Q Consensus 304 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------- 344 (549)
||++|.++..... ..++..++..++.+++..+..||+..
T Consensus 107 e~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 107 KYIKGERITYEQY--HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp ECCCCBCCCHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred eecCCcccccccc--ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988864332 23566777788888888888888432
Q ss_pred ---------------------CCceEecccCcCeeeecCCCceEEeeccccccc
Q 008893 345 ---------------------DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 377 (549)
Q Consensus 345 ---------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 377 (549)
.+.++|+|++|.||+++++..+.|+||+.+...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 134699999999999998666799999988643
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.61 E-value=2e-09 Score=109.71 Aligned_cols=84 Identities=21% Similarity=0.257 Sum_probs=47.5
Q ss_pred hhhcccCccc-ccCC---cccCCCCCCCEEEccCCcCC--C---CCcccccCCcccCeeeccCcccc----cCCCccccc
Q 008893 27 GRLLQNNNIS-GHIP---TEIGKLSKLLTLDLSNNFFT--G---PIPSTVSHLETLQYLRLNNNSLT----GAIPPSLSN 93 (549)
Q Consensus 27 ~l~l~~n~l~-~~~p---~~~~~l~~L~~L~ls~N~l~--g---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~ 93 (549)
.++|++|+|+ +.+| ..+.++++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 3556666665 3333 34555666666666666665 2 23335556666666666666664 455555666
Q ss_pred CCCCceEeccCCCCCCC
Q 008893 94 MSQLAFLDLSYNNLSGP 110 (549)
Q Consensus 94 l~~L~~l~l~~N~l~~~ 110 (549)
+++|+.|+|++|.|++.
T Consensus 243 ~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSAR 259 (386)
T ss_dssp CTTCCEEECTTCCCCHH
T ss_pred CCCcCEEECCCCCCchh
Confidence 66666666666666543
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.58 E-value=1.1e-08 Score=103.11 Aligned_cols=83 Identities=23% Similarity=0.132 Sum_probs=50.6
Q ss_pred cccCcccccCCcccCCCCCCCEEEccCCcCCCCCc----ccccCCc-ccCeeeccCcccccCCCcccccC-----CCCce
Q 008893 30 LQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIP----STVSHLE-TLQYLRLNNNSLTGAIPPSLSNM-----SQLAF 99 (549)
Q Consensus 30 l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p----~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l-----~~L~~ 99 (549)
|+.|+++|.+|..+...++|++|||++|.|++..+ ..|..++ +|+.|+|++|+|++..+..|..+ ++|+.
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 55666666666655555556666666666664444 4555666 66666666666665555555554 66666
Q ss_pred EeccCCCCCCCCC
Q 008893 100 LDLSYNNLSGPVP 112 (549)
Q Consensus 100 l~l~~N~l~~~~p 112 (549)
|+|++|.+++..+
T Consensus 85 L~Ls~n~l~~~~~ 97 (362)
T 3goz_A 85 LNLSGNFLSYKSS 97 (362)
T ss_dssp EECCSSCGGGSCH
T ss_pred EECcCCcCChHHH
Confidence 6666666665544
No 387
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.57 E-value=1.2e-07 Score=98.53 Aligned_cols=71 Identities=24% Similarity=0.273 Sum_probs=32.3
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
+++++|++++ +|..+ .+|++|+|++|++++ +| .+.++++|+.|++++|++++ +|... ++|+.|++++|.+
T Consensus 158 L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l 227 (454)
T 1jl5_A 158 IDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNIL 227 (454)
T ss_dssp EECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCC
T ss_pred EECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcC
Confidence 3455555553 33322 345555555555553 33 34555555555555555542 33211 2444444444444
Q ss_pred C
Q 008893 108 S 108 (549)
Q Consensus 108 ~ 108 (549)
+
T Consensus 228 ~ 228 (454)
T 1jl5_A 228 E 228 (454)
T ss_dssp S
T ss_pred C
Confidence 4
No 388
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.57 E-value=6.3e-07 Score=87.05 Aligned_cols=76 Identities=20% Similarity=0.210 Sum_probs=60.5
Q ss_pred CCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCC---CccceEEEEecCCceeeEeeccC
Q 008893 231 SKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCMTTTERLLVYPYMS 307 (549)
Q Consensus 231 ~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 307 (549)
..+.|+.|.++.||++...+|+.++||+..... ......|..|++.++.+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 356799999999999999889999999975432 22234689999999999765 577777763 4799999999
Q ss_pred CCch
Q 008893 308 NGSV 311 (549)
Q Consensus 308 ~g~L 311 (549)
++.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8875
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.56 E-value=4.7e-09 Score=106.95 Aligned_cols=123 Identities=17% Similarity=0.196 Sum_probs=75.6
Q ss_pred cccceeeeeeeeeecC----------Cc-eeehhhhcccCcccccCCcccC----CC---------CCCCEEEccCCcCC
Q 008893 5 LEKVLIIVLIQVICSD----------GV-FFSFGRLLQNNNISGHIPTEIG----KL---------SKLLTLDLSNNFFT 60 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~----------~~-~~~~~l~l~~n~l~~~~p~~~~----~l---------~~L~~L~ls~N~l~ 60 (549)
+++|+.|+|.++...+ .. .....++|++|.|++..+..+. .+ ++|++|+|++|+|+
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 4667777776665543 01 2333456777777644333333 33 77788888888776
Q ss_pred -CCCc---ccccCCcccCeeeccCcccc--c---CCCcccccCCCCceEeccCCCCC----CCCCccc-----ccccccc
Q 008893 61 -GPIP---STVSHLETLQYLRLNNNSLT--G---AIPPSLSNMSQLAFLDLSYNNLS----GPVPSFH-----AKTFNIT 122 (549)
Q Consensus 61 -g~~p---~~~~~l~~L~~L~l~~N~l~--g---~~p~~~~~l~~L~~l~l~~N~l~----~~~p~~~-----~~~~~l~ 122 (549)
+.+| ..+..+++|+.|+|++|+|+ | ..|..+..+++|+.|+|++|.++ +.+|..+ ...++++
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 3444 45667777888888888776 3 34446777777888888888775 3333322 2456777
Q ss_pred CCccc
Q 008893 123 GNSLI 127 (549)
Q Consensus 123 ~N~~~ 127 (549)
+|.+.
T Consensus 253 ~n~i~ 257 (386)
T 2ca6_A 253 DCLLS 257 (386)
T ss_dssp TCCCC
T ss_pred CCCCc
Confidence 77653
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.56 E-value=1.2e-08 Score=102.87 Aligned_cols=102 Identities=22% Similarity=0.246 Sum_probs=73.4
Q ss_pred hhhhcccCcccccCC----cccCCCC-CCCEEEccCCcCCCCCcccccCC-----cccCeeeccCcccccCCCccccc--
Q 008893 26 FGRLLQNNNISGHIP----TEIGKLS-KLLTLDLSNNFFTGPIPSTVSHL-----ETLQYLRLNNNSLTGAIPPSLSN-- 93 (549)
Q Consensus 26 ~~l~l~~n~l~~~~p----~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~~-- 93 (549)
..++|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..+..+ ++|+.|+|++|+|++..+..+..
T Consensus 25 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 104 (362)
T 3goz_A 25 TSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTL 104 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHH
T ss_pred eEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHH
Confidence 346788888886666 6677777 78888888888887767777665 78888888888888666654443
Q ss_pred --C-CCCceEeccCCCCCCCCCcc----------ccccccccCCccc
Q 008893 94 --M-SQLAFLDLSYNNLSGPVPSF----------HAKTFNITGNSLI 127 (549)
Q Consensus 94 --l-~~L~~l~l~~N~l~~~~p~~----------~~~~~~l~~N~~~ 127 (549)
+ ++|+.|+|++|.|++..+.. ..+.+++++|.+.
T Consensus 105 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 105 AAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp HTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred HhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 3 78888888888887665532 2345677777664
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.55 E-value=6.3e-08 Score=104.33 Aligned_cols=109 Identities=25% Similarity=0.255 Sum_probs=70.7
Q ss_pred ccceeeeeeeeeecC--Cc-eeehhhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcc
Q 008893 6 EKVLIIVLIQVICSD--GV-FFSFGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 82 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~--~~-~~~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 82 (549)
.+|+.|++.++..+. .. .....+++++|.|+ .+|.. +++|+.|+|++|+|++ +| ..+++|+.|+|++|+
T Consensus 181 ~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~ 252 (622)
T 3g06_A 181 SGLQELSVSDNQLASLPTLPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNR 252 (622)
T ss_dssp TTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSC
T ss_pred CCCcEEECCCCCCCCCCCccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCC
Confidence 667777777665543 11 11223567777777 45532 4678888888888874 56 445778888888888
Q ss_pred cccCCCcccccCCCCceEeccCCCCCCCCCcccc-----ccccccCCccc
Q 008893 83 LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 127 (549)
Q Consensus 83 l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 127 (549)
|+ .+|. .+++|+.|+|++|.|+. +|..+. ..+++++|++.
T Consensus 253 L~-~lp~---~~~~L~~L~Ls~N~L~~-lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 253 LT-SLPM---LPSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp CS-CCCC---CCTTCCEEECCSSCCCS-CCGGGGGSCTTCEEECCSCCCC
T ss_pred CC-cCCc---ccccCcEEeCCCCCCCc-CCHHHhhccccCEEEecCCCCC
Confidence 87 5665 56778888888888873 444322 45677777775
No 392
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.51 E-value=1.9e-07 Score=100.56 Aligned_cols=88 Identities=27% Similarity=0.257 Sum_probs=60.6
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNL 107 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 107 (549)
++|++|.|++ +|.. +++|+.|+|++|.|+ .+|.. +++|+.|+|++|+|++ +| ..+++|+.|+|++|.|
T Consensus 186 L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L 253 (622)
T 3g06_A 186 LSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRL 253 (622)
T ss_dssp EECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCC
T ss_pred EECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCC
Confidence 5577777763 4432 367777777777777 45543 3778888888888884 66 3557888888888888
Q ss_pred CCCCCcc-ccccccccCCccc
Q 008893 108 SGPVPSF-HAKTFNITGNSLI 127 (549)
Q Consensus 108 ~~~~p~~-~~~~~~l~~N~~~ 127 (549)
++.++.. ....+++++|.+.
T Consensus 254 ~~lp~~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 254 TSLPMLPSGLLSLSVYRNQLT 274 (622)
T ss_dssp SCCCCCCTTCCEEECCSSCCC
T ss_pred CcCCcccccCcEEeCCCCCCC
Confidence 8654411 1356788888776
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=1.2e-08 Score=97.45 Aligned_cols=84 Identities=26% Similarity=0.268 Sum_probs=62.7
Q ss_pred hhcccCccc---ccCCcccCCCCCCCEEEccCCcCCC--CCcccccCCcccCeeeccCcccccCCCcccccCC--CCceE
Q 008893 28 RLLQNNNIS---GHIPTEIGKLSKLLTLDLSNNFFTG--PIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMS--QLAFL 100 (549)
Q Consensus 28 l~l~~n~l~---~~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~--~L~~l 100 (549)
++++.|... +.++-...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 455666332 2222222568899999999999997 4567778899999999999999964 3455555 89999
Q ss_pred eccCCCCCCCCCc
Q 008893 101 DLSYNNLSGPVPS 113 (549)
Q Consensus 101 ~l~~N~l~~~~p~ 113 (549)
+|++|++++.+|.
T Consensus 226 ~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 226 WLDGNSLCDTFRD 238 (267)
T ss_dssp ECTTSTTGGGCSS
T ss_pred EccCCcCccccCc
Confidence 9999999987663
No 394
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.42 E-value=2.3e-08 Score=99.57 Aligned_cols=99 Identities=19% Similarity=0.181 Sum_probs=78.1
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCC-CcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP-IPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.+.+++|.+++..+. +.++++|++|+|++|.+++. +|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|
T Consensus 74 ~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~ 152 (336)
T 2ast_B 74 AFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 152 (336)
T ss_dssp EEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred EEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCC
Confidence 456888888877665 56789999999999998865 7888889999999999999998888888888999999999999
Q ss_pred -CCCCC-CCcc-----ccccccccCC-cc
Q 008893 106 -NLSGP-VPSF-----HAKTFNITGN-SL 126 (549)
Q Consensus 106 -~l~~~-~p~~-----~~~~~~l~~N-~~ 126 (549)
.+++. ++.. ..+.+++++| .+
T Consensus 153 ~~l~~~~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 153 SGFSEFALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp BSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred CCCCHHHHHHHHhcCCCCCEEcCCCCCCc
Confidence 67752 3332 1356677777 44
No 395
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.41 E-value=2.1e-06 Score=84.25 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=94.0
Q ss_pred CCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCC---CccceEEEEe-cCCceeeEeeccC
Q 008893 232 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCM-TTTERLLVYPYMS 307 (549)
Q Consensus 232 ~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~ 307 (549)
.+.++.|....||+. |..+++|+... ......+..|.+++..+.+. .+.+++.++. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 356788888999988 56688887532 12245688999999998653 2556676664 4456789999999
Q ss_pred CCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------------
Q 008893 308 NGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ-------------------------------------------- 343 (549)
Q Consensus 308 ~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------------- 343 (549)
|..+.+.... .++...+..++.+++..|..||+.
T Consensus 97 G~~l~~~~~~--~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 97 GQILGEDGMA--VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp SEECHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred CeECchhhhh--hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 9887653211 234455555555555555555532
Q ss_pred -------------CCCceEecccCcCeeeecC---CCc-eEEeecccccc
Q 008893 344 -------------CDPKIIHRDVKAANILLDE---YYE-AVVGDFGLAKL 376 (549)
Q Consensus 344 -------------~~~~ivH~Dlkp~Nill~~---~~~-~kl~Dfg~~~~ 376 (549)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999987 455 47999998764
No 396
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.39 E-value=3.1e-08 Score=98.62 Aligned_cols=120 Identities=22% Similarity=0.232 Sum_probs=91.3
Q ss_pred ccceeeeeeeeeecCC------ceeehhhhcccCccccc-CCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeec
Q 008893 6 EKVLIIVLIQVICSDG------VFFSFGRLLQNNNISGH-IPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 78 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~~------~~~~~~l~l~~n~l~~~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 78 (549)
.+++.+++.++...+. -.....++|++|.+++. +|..+.++++|++|+|++|.+++..|..+..+++|+.|+|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 5677777766654321 12344577999998866 8888999999999999999999888889999999999999
Q ss_pred cCc-ccccC-CCcccccCCCCceEeccCC-CCCCC-CCcc------ccccccccCCc
Q 008893 79 NNN-SLTGA-IPPSLSNMSQLAFLDLSYN-NLSGP-VPSF------HAKTFNITGNS 125 (549)
Q Consensus 79 ~~N-~l~g~-~p~~~~~l~~L~~l~l~~N-~l~~~-~p~~------~~~~~~l~~N~ 125 (549)
++| .+++. +|..+..+++|+.|++++| .+++. ++.. ..+.+++++|.
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 999 68753 7777888999999999999 88753 2221 23456666663
No 397
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.36 E-value=2.4e-06 Score=82.07 Aligned_cols=135 Identities=19% Similarity=0.141 Sum_probs=97.2
Q ss_pred eeeeeCCe-EEEEEEEC-CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc-CCCccceEEEEecCCceeeEeeccCCCc
Q 008893 234 LVGKGGFG-NVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLVYPYMSNGS 310 (549)
Q Consensus 234 ~iG~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~ 310 (549)
.+..|..| .||+.... ++..+++|+-... ....+..|...|+.+. +--+-++++++.+.+..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556665 68988765 4667889986532 2446788999888774 3336678899988889999999999988
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc-----------------------------------------------
Q 008893 311 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQ----------------------------------------------- 343 (549)
Q Consensus 311 L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------------- 343 (549)
+.+..... ......++.+++..|..||+.
T Consensus 107 ~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 107 AFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred ccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 77654321 223345666677777777742
Q ss_pred --------CCCceEecccCcCeeeecCCCceEEeecccccc
Q 008893 344 --------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 376 (549)
Q Consensus 344 --------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 376 (549)
..+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112489999999999999877777999998753
No 398
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.33 E-value=5.9e-07 Score=90.00 Aligned_cols=110 Identities=19% Similarity=0.126 Sum_probs=73.2
Q ss_pred cccceeeeeeeeeecC-------Cceeehhhhcc-cCcccccCCcccCCCC-CCCEEEccCCcCCCCCcccccCCcccCe
Q 008893 5 LEKVLIIVLIQVICSD-------GVFFSFGRLLQ-NNNISGHIPTEIGKLS-KLLTLDLSNNFFTGPIPSTVSHLETLQY 75 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~-------~~~~~~~l~l~-~n~l~~~~p~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 75 (549)
+.+|+.|++.++.... .......+++. +|++....+..|..+. .|+.|+|++|+|+ .+|......++|+.
T Consensus 103 l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~ 181 (350)
T 4ay9_X 103 LPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDE 181 (350)
T ss_dssp CTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEE
T ss_pred ccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhH
Confidence 4667777777665532 11122223443 4566655556676664 5788888888888 56666666778888
Q ss_pred eeccC-cccccCCC-cccccCCCCceEeccCCCCCCCCCcccc
Q 008893 76 LRLNN-NSLTGAIP-PSLSNMSQLAFLDLSYNNLSGPVPSFHA 116 (549)
Q Consensus 76 L~l~~-N~l~g~~p-~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 116 (549)
|++++ |.++ .+| ..|..+++|+.|+|++|+|+..++..+.
T Consensus 182 l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 182 LNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp EECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred HhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 88875 5566 555 4678888888888888888877665543
No 399
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.31 E-value=1.4e-06 Score=87.45 Aligned_cols=144 Identities=12% Similarity=0.144 Sum_probs=89.3
Q ss_pred Cee-eeeCCeEEEEEEEC-------CCCEEEEEEcccCCC--CCcHHHHHHHHHHHhhccC---CCccceEEEEecC---
Q 008893 233 NLV-GKGGFGNVYKGYLQ-------DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVH---RNLLRLIGFCMTT--- 296 (549)
Q Consensus 233 ~~i-G~G~~g~Vy~~~~~-------~g~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~--- 296 (549)
+.| +.|....+|+.... +++.+++|+...... ......+..|..+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999998764 266788998754320 1011346788888887743 3467788887655
Q ss_pred CceeeEeeccCCCchhhhhccC------CCCCHHHHHHHHHHHHHHH---------------------------------
Q 008893 297 TERLLVYPYMSNGSVASRLKAK------PSLDWATRKRIALGAARGL--------------------------------- 337 (549)
Q Consensus 297 ~~~~lv~e~~~~g~L~~~l~~~------~~l~~~~~~~i~~~i~~~L--------------------------------- 337 (549)
...++||||+++..+.+.+... ..++..++..++.+++..|
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWV 185 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHHH
T ss_pred CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHHH
Confidence 3568999999987765421000 0122222222222222222
Q ss_pred ---------------------HHhhhc-------CCCceEecccCcCeeeecCCCceEEeecccccc
Q 008893 338 ---------------------LYLHEQ-------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 376 (549)
Q Consensus 338 ---------------------~~LH~~-------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 376 (549)
.+|.+. ..+.++|+|+.+.||+++++..+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 186 RSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred HHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 233221 135799999999999999654578999998763
No 400
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.31 E-value=3.5e-06 Score=84.67 Aligned_cols=141 Identities=11% Similarity=0.080 Sum_probs=90.0
Q ss_pred CCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCC--ccceEEEEecC-CceeeEeecc
Q 008893 230 SSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGFCMTT-TERLLVYPYM 306 (549)
Q Consensus 230 ~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~ 306 (549)
...+.++.|....+|+... +|+.+++|+.... ..+..|..++..+.... +.++++++... ...++||||+
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 3456789999999999886 4788999987432 25788888988886533 55677777654 5689999999
Q ss_pred CCCchhhh------------------hccCC-----C------------CCHHHH---------------------HHHH
Q 008893 307 SNGSVASR------------------LKAKP-----S------------LDWATR---------------------KRIA 330 (549)
Q Consensus 307 ~~g~L~~~------------------l~~~~-----~------------l~~~~~---------------------~~i~ 330 (549)
++.++.+. ++... . -+|... ....
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98665421 01100 0 001111 0111
Q ss_pred HHHHHHHHHhhhc-CCCceEecccCcCeeeecCCCceEEeeccccccc
Q 008893 331 LGAARGLLYLHEQ-CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 377 (549)
Q Consensus 331 ~~i~~~L~~LH~~-~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 377 (549)
..+...+.++... ..+.++|+|+++.||++++++.+.|+||+.+..-
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1112222233211 1257899999999999988777889999988653
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.21 E-value=5e-07 Score=86.13 Aligned_cols=75 Identities=24% Similarity=0.300 Sum_probs=62.1
Q ss_pred ehhhhcccCcccc--cCCcccCCCCCCCEEEccCCcCCCCCcccccCCc--ccCeeeccCcccccCCCc-------cccc
Q 008893 25 SFGRLLQNNNISG--HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLE--TLQYLRLNNNSLTGAIPP-------SLSN 93 (549)
Q Consensus 25 ~~~l~l~~n~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~--~L~~L~l~~N~l~g~~p~-------~~~~ 93 (549)
...|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|. .+..
T Consensus 172 L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~ 249 (267)
T 3rw6_A 172 LLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRER 249 (267)
T ss_dssp CCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHH
T ss_pred CCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHH
Confidence 3457899999998 5567788999999999999999964 3455555 999999999999988873 4778
Q ss_pred CCCCceEe
Q 008893 94 MSQLAFLD 101 (549)
Q Consensus 94 l~~L~~l~ 101 (549)
+++|+.||
T Consensus 250 ~P~L~~LD 257 (267)
T 3rw6_A 250 FPKLLRLD 257 (267)
T ss_dssp CTTCCEES
T ss_pred CcccCeEC
Confidence 99999886
No 402
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.15 E-value=5.1e-08 Score=101.54 Aligned_cols=122 Identities=26% Similarity=0.261 Sum_probs=69.4
Q ss_pred cccceeeeeeeeeecCCc-----------eeehhhhcccCcccccCCccc-CCCC----CCCEEEccCCcCCC----CCc
Q 008893 5 LEKVLIIVLIQVICSDGV-----------FFSFGRLLQNNNISGHIPTEI-GKLS----KLLTLDLSNNFFTG----PIP 64 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-----------~~~~~l~l~~n~l~~~~p~~~-~~l~----~L~~L~ls~N~l~g----~~p 64 (549)
+++|+.|+|.++...+.. .....++|++|.+++..+..+ ..++ +|++|+|++|+++. .+|
T Consensus 27 ~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 106 (461)
T 1z7x_W 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLS 106 (461)
T ss_dssp HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred cCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHH
Confidence 456667777655543210 122345677777765433322 2233 57777777777773 456
Q ss_pred ccccCCcccCeeeccCcccccCCCccccc-----CCCCceEeccCCCCCCCCC----cc-----ccccccccCCcc
Q 008893 65 STVSHLETLQYLRLNNNSLTGAIPPSLSN-----MSQLAFLDLSYNNLSGPVP----SF-----HAKTFNITGNSL 126 (549)
Q Consensus 65 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~l~l~~N~l~~~~p----~~-----~~~~~~l~~N~~ 126 (549)
..+..+++|+.|+|++|.+++..+..+.. .++|+.|++++|.+++... .. ..+.+++++|.+
T Consensus 107 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i 182 (461)
T 1z7x_W 107 STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDI 182 (461)
T ss_dssp HHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred HHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCc
Confidence 67777777777777777776443333322 3467777777777765331 11 124566666665
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.10 E-value=8.7e-08 Score=96.82 Aligned_cols=122 Identities=18% Similarity=0.136 Sum_probs=73.2
Q ss_pred ccceeeeeeeeeecCCce--------eehhhhcccCcccccCCccc-----CCCCCCCEEEccCCcCCC----CCccccc
Q 008893 6 EKVLIIVLIQVICSDGVF--------FSFGRLLQNNNISGHIPTEI-----GKLSKLLTLDLSNNFFTG----PIPSTVS 68 (549)
Q Consensus 6 ~~~~~~~~~~~~c~~~~~--------~~~~l~l~~n~l~~~~p~~~-----~~l~~L~~L~ls~N~l~g----~~p~~~~ 68 (549)
++|+.|+|.++...+... ....++|++|.|+..-...+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 456667766655433111 12235677777764433333 245678888888887763 2444556
Q ss_pred CCcccCeeeccCccccc----CCCcccccCCCCceEeccCCCCCCCCCc---------cccccccccCCccc
Q 008893 69 HLETLQYLRLNNNSLTG----AIPPSLSNMSQLAFLDLSYNNLSGPVPS---------FHAKTFNITGNSLI 127 (549)
Q Consensus 69 ~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~l~l~~N~l~~~~p~---------~~~~~~~l~~N~~~ 127 (549)
.+++|+.|+|++|.|+. .++..+...++|+.|+|++|.|++.... .....+++++|.+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 67778888888888763 2345566677788888888887643211 11356677777663
No 404
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.09 E-value=1.1e-07 Score=98.86 Aligned_cols=123 Identities=17% Similarity=0.095 Sum_probs=88.8
Q ss_pred cccceeeeeeeeeecCCc-----------eeehhhhcccCcccccCCcccC-----CCCCCCEEEccCCcCCCC----Cc
Q 008893 5 LEKVLIIVLIQVICSDGV-----------FFSFGRLLQNNNISGHIPTEIG-----KLSKLLTLDLSNNFFTGP----IP 64 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~-----------~~~~~l~l~~n~l~~~~p~~~~-----~l~~L~~L~ls~N~l~g~----~p 64 (549)
+.+|+.|++.++...+.. .....++|++|.+++..+..+. ..++|+.|+|++|.+++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 467888888776554311 1233467899988765444443 236999999999999865 56
Q ss_pred ccccCCcccCeeeccCcccccCCCccccc-----CCCCceEeccCCCCCC----CCCcc-----ccccccccCCccc
Q 008893 65 STVSHLETLQYLRLNNNSLTGAIPPSLSN-----MSQLAFLDLSYNNLSG----PVPSF-----HAKTFNITGNSLI 127 (549)
Q Consensus 65 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~l~l~~N~l~~----~~p~~-----~~~~~~l~~N~~~ 127 (549)
..+..+++|+.|+|++|++++..+..+.. .++|+.|+|++|.+++ .+|.. ....+++++|++.
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 77788899999999999998665555543 6799999999999985 44543 2356889998874
No 405
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=6.6e-06 Score=81.53 Aligned_cols=88 Identities=14% Similarity=0.089 Sum_probs=73.5
Q ss_pred hhhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccC-eeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 27 GRLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQ-YLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 27 ~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.++|++|+++...+..|.+|++|+.|+|++| ++..-+..|.+|++|+ .|+|.+ +++..-+.+|.+|++|+.|++++|
T Consensus 230 ~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n 307 (329)
T 3sb4_A 230 SLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGD 307 (329)
T ss_dssp EEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSS
T ss_pred EEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCC
Confidence 5668899998666778999999999999998 7755667799999999 999988 777566789999999999999999
Q ss_pred CCCCCCCcccc
Q 008893 106 NLSGPVPSFHA 116 (549)
Q Consensus 106 ~l~~~~p~~~~ 116 (549)
.++...+..|.
T Consensus 308 ~i~~I~~~aF~ 318 (329)
T 3sb4_A 308 KITTLGDELFG 318 (329)
T ss_dssp CCCEECTTTTC
T ss_pred ccCccchhhhc
Confidence 99866665554
No 406
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.02 E-value=3.5e-07 Score=92.39 Aligned_cols=107 Identities=16% Similarity=0.132 Sum_probs=82.2
Q ss_pred cccceeeeeeeeeecCCc------------eeehhhhcccCccccc----CCcccCCCCCCCEEEccCCcCCCC----Cc
Q 008893 5 LEKVLIIVLIQVICSDGV------------FFSFGRLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTGP----IP 64 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~~~~------------~~~~~l~l~~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p 64 (549)
+.+|+.|+|.++...+.. .....++|++|.|+.. ++..+..+++|++|||++|.|+.. ++
T Consensus 125 L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 125 FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 567889999887664311 2234577999999742 455667899999999999999842 35
Q ss_pred ccccCCcccCeeeccCccccc----CCCcccccCCCCceEeccCCCCCCCC
Q 008893 65 STVSHLETLQYLRLNNNSLTG----AIPPSLSNMSQLAFLDLSYNNLSGPV 111 (549)
Q Consensus 65 ~~~~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~l~l~~N~l~~~~ 111 (549)
..+...++|+.|+|++|.|+. .++..+...++|+.|+|++|.|++..
T Consensus 205 ~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g 255 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEG 255 (372)
T ss_dssp HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHH
T ss_pred HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHH
Confidence 667888999999999999984 34455667899999999999997543
No 407
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.98 E-value=3.4e-05 Score=78.47 Aligned_cols=76 Identities=14% Similarity=0.051 Sum_probs=49.0
Q ss_pred CCeeeeeCCeEEEEEEEC-CCCEEEEEEcccCCC------CCcHHHHHHHHHHHhhccC--CC-ccceEEEEecCCceee
Q 008893 232 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA------IGGEIQFQTEVEMISLAVH--RN-LLRLIGFCMTTTERLL 301 (549)
Q Consensus 232 ~~~iG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 301 (549)
.+.||.|.++.||++... +++.++||....... ......+..|.+++..+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999754 468899998653211 1122356778888887742 33 3455544 3456789
Q ss_pred EeeccCCC
Q 008893 302 VYPYMSNG 309 (549)
Q Consensus 302 v~e~~~~g 309 (549)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 408
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=5.3e-05 Score=75.13 Aligned_cols=137 Identities=17% Similarity=0.219 Sum_probs=78.7
Q ss_pred CeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccC--CCccceEE------EEecCCceeeEee
Q 008893 233 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH--RNLLRLIG------FCMTTTERLLVYP 304 (549)
Q Consensus 233 ~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e 304 (549)
+.|+.|..+.||+....+| .+++|+.... ...+..|..++..+.. -.+.+++. +....+..+++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3456677899999987655 4889988642 2334445555554431 12333332 1123556789999
Q ss_pred ccCCCchh--------------hhhc---c-C--C--------CCCHHHHH-----------------------------
Q 008893 305 YMSNGSVA--------------SRLK---A-K--P--------SLDWATRK----------------------------- 327 (549)
Q Consensus 305 ~~~~g~L~--------------~~l~---~-~--~--------~l~~~~~~----------------------------- 327 (549)
|++|..+. ..++ . . . .-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 0111 1 0 0 01232110
Q ss_pred --HHHHHHHHHHHHhhh----------cCCCceEecccCcCeeeecCCCceEEeeccccc
Q 008893 328 --RIALGAARGLLYLHE----------QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 375 (549)
Q Consensus 328 --~i~~~i~~~L~~LH~----------~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 375 (549)
.+...+..++.+|++ ...+.++|||+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123345666653 124589999999999999888899999999775
No 409
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.80 E-value=0.00013 Score=71.39 Aligned_cols=136 Identities=16% Similarity=0.148 Sum_probs=90.8
Q ss_pred CCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhcc---CCCccceEEEEecCCceeeEeeccC
Q 008893 231 SKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV---HRNLLRLIGFCMTTTERLLVYPYMS 307 (549)
Q Consensus 231 ~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~ 307 (549)
..+.|+.|.+..+|+.... +..+++|+.... ....+..|...|+.+. ...+.++++++...+..++||||++
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 3457899999999998864 677888987532 2456888999888874 3567888998887788999999999
Q ss_pred CCchhh-----------hhcc--C-CC-------------------CCHHHHH---HHHH----------------HHHH
Q 008893 308 NGSVAS-----------RLKA--K-PS-------------------LDWATRK---RIAL----------------GAAR 335 (549)
Q Consensus 308 ~g~L~~-----------~l~~--~-~~-------------------l~~~~~~---~i~~----------------~i~~ 335 (549)
+..+.. .++. . .. -+|.... ++.. .++.
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 876521 1121 1 10 1344321 1111 1111
Q ss_pred H-HHHhhh-cCCCceEecccCcCeeeecCCCceEEeecc
Q 008893 336 G-LLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFG 372 (549)
Q Consensus 336 ~-L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 372 (549)
. ...|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 123321 2357899999999999999887 8888874
No 410
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.77 E-value=0.00018 Score=69.53 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=56.5
Q ss_pred CCCCCCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCC---CccceEEEEecCCceeeEee
Q 008893 228 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCMTTTERLLVYP 304 (549)
Q Consensus 228 ~~~~~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e 304 (549)
.....+.+|.|..+.||+..+.||+.|++|+...... .....|..|...|+.+... -+.+++++ +..++|||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e 90 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP-ALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAME 90 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc-chhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEE
Confidence 4455678899999999999999999999998764432 2233578899988887422 24455554 23478999
Q ss_pred ccCCCch
Q 008893 305 YMSNGSV 311 (549)
Q Consensus 305 ~~~~g~L 311 (549)
|++.+..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9886543
No 411
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.76 E-value=0.00015 Score=74.32 Aligned_cols=79 Identities=11% Similarity=-0.026 Sum_probs=46.5
Q ss_pred CCceEecccCcCeeeecCCCceEEeecccccccCCCCCceeeccccccCccCchhhccCC---CCCcccchhHhHHHHHH
Q 008893 345 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLEL 421 (549)
Q Consensus 345 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~il~el 421 (549)
.+.++|||++|.||+++.++ ++++||+.+..-.....-......-...|++|+...... .....++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 44899999999999999876 999999988643211000000000113456665543111 11234555777777777
Q ss_pred HhC
Q 008893 422 ISG 424 (549)
Q Consensus 422 ltg 424 (549)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 412
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.60 E-value=0.00017 Score=71.30 Aligned_cols=15 Identities=0% Similarity=0.056 Sum_probs=11.9
Q ss_pred cccceeeeeeeeeec
Q 008893 5 LEKVLIIVLIQVICS 19 (549)
Q Consensus 5 ~~~~~~~~~~~~~c~ 19 (549)
+.+|+.|||.++.-.
T Consensus 48 l~~L~~LdLs~n~i~ 62 (329)
T 3sb4_A 48 FPSLKVLDISNAEIK 62 (329)
T ss_dssp CTTCCEEEEEEEEEC
T ss_pred hccCeEEecCcceeE
Confidence 567889999887765
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.57 E-value=3.9e-06 Score=75.75 Aligned_cols=82 Identities=17% Similarity=0.211 Sum_probs=52.0
Q ss_pred hhcccC-ccccc----CCcccCCCCCCCEEEccCCcCCCC----CcccccCCcccCeeeccCcccccC----CCcccccC
Q 008893 28 RLLQNN-NISGH----IPTEIGKLSKLLTLDLSNNFFTGP----IPSTVSHLETLQYLRLNNNSLTGA----IPPSLSNM 94 (549)
Q Consensus 28 l~l~~n-~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l 94 (549)
++|++| .|... +...+...++|++|+|++|.|... +...+...++|+.|+|++|.|+.. +...+...
T Consensus 41 L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n 120 (185)
T 1io0_A 41 VNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSN 120 (185)
T ss_dssp EECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGC
T ss_pred EEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhC
Confidence 556666 66532 334455667777777777777621 233455556777777777777632 34556666
Q ss_pred CCCceEec--cCCCCCC
Q 008893 95 SQLAFLDL--SYNNLSG 109 (549)
Q Consensus 95 ~~L~~l~l--~~N~l~~ 109 (549)
+.|+.|+| ++|.|..
T Consensus 121 ~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 121 TSLIELRIDNQSQPLGN 137 (185)
T ss_dssp SSCCEEECCCCSSCCCH
T ss_pred CCceEEEecCCCCCCCH
Confidence 77777777 6777763
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.47 E-value=6.3e-06 Score=74.35 Aligned_cols=103 Identities=13% Similarity=0.159 Sum_probs=76.6
Q ss_pred ccceeeeeeee-eecC-----------CceeehhhhcccCccccc----CCcccCCCCCCCEEEccCCcCCCC----Ccc
Q 008893 6 EKVLIIVLIQV-ICSD-----------GVFFSFGRLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTGP----IPS 65 (549)
Q Consensus 6 ~~~~~~~~~~~-~c~~-----------~~~~~~~l~l~~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~ 65 (549)
.+|+.|+|.++ ...+ .......++|++|.|... +...+...++|++|+|++|.|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 56788888776 4332 112334578999998743 345566678999999999999842 456
Q ss_pred cccCCcccCeeec--cCcccccC----CCcccccCCCCceEeccCCCCC
Q 008893 66 TVSHLETLQYLRL--NNNSLTGA----IPPSLSNMSQLAFLDLSYNNLS 108 (549)
Q Consensus 66 ~~~~l~~L~~L~l--~~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~ 108 (549)
.+...++|+.|+| ++|.|+.. +...+...+.|+.|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 7788899999999 88999843 4456667789999999999885
No 415
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.44 E-value=0.0002 Score=60.16 Aligned_cols=57 Identities=23% Similarity=0.239 Sum_probs=34.0
Q ss_pred EEEccCCcCC-CCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCCCC
Q 008893 51 TLDLSNNFFT-GPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG 109 (549)
Q Consensus 51 ~L~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 109 (549)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5666666665 23454432 356667777777764444556666677777666666653
No 416
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.39 E-value=0.00049 Score=67.57 Aligned_cols=154 Identities=9% Similarity=0.044 Sum_probs=84.3
Q ss_pred CHHHHHHHhcCCCCC-----CeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCC--ccceE
Q 008893 218 HFKELQSATSNFSSK-----NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLI 290 (549)
Q Consensus 218 ~~~~~~~~~~~~~~~-----~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~ 290 (549)
+.+++......|... +.|+.|....+|+....+| .+++|+...... ...+..|..++..+.... +.+++
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344555544556542 3456688899999987766 577898865311 124556777776664222 22333
Q ss_pred EE------EecCCceeeEeeccCCCchhh--------------hhcc---C--CC----C---CHHHHHH----------
Q 008893 291 GF------CMTTTERLLVYPYMSNGSVAS--------------RLKA---K--PS----L---DWATRKR---------- 328 (549)
Q Consensus 291 ~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~---~--~~----l---~~~~~~~---------- 328 (549)
.. ....+..+++++|++|..+.. .++. . .+ . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 112345689999998865421 0111 0 00 1 1222110
Q ss_pred --HHHHHHHHHHHhhhc----CCCceEecccCcCeeeecCCCceEEeeccccc
Q 008893 329 --IALGAARGLLYLHEQ----CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 375 (549)
Q Consensus 329 --i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 375 (549)
+...+...+.++++. ...+++|+|+.+.||+++++..+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001133445555432 23479999999999999987666899999775
No 417
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.35 E-value=0.00073 Score=65.71 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=75.1
Q ss_pred CCeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCc-cceEEEEecCCceeeEeecc-CCC
Q 008893 232 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLVYPYM-SNG 309 (549)
Q Consensus 232 ~~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g 309 (549)
.+.|+.|....+|+. +.+++|+....... ......|...++.+....+ .+++++ ..+.-++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 678889999999998 45888887643211 1123567777777653333 355544 344568899999 554
Q ss_pred chhh--------h----------hccCC-CC----C-HHHHHHHHHH--------------HHHHHH----Hhhh-cCCC
Q 008893 310 SVAS--------R----------LKAKP-SL----D-WATRKRIALG--------------AARGLL----YLHE-QCDP 346 (549)
Q Consensus 310 ~L~~--------~----------l~~~~-~l----~-~~~~~~i~~~--------------i~~~L~----~LH~-~~~~ 346 (549)
++.. . +|... .+ + +.....+... +...+. .+.. ...+
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 173 (301)
T 3dxq_A 94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL 173 (301)
T ss_dssp ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 4421 0 11111 01 1 1111111110 111111 1111 1234
Q ss_pred ceEecccCcCeeeecCCCceEEeecccccc
Q 008893 347 KIIHRDVKAANILLDEYYEAVVGDFGLAKL 376 (549)
Q Consensus 347 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 376 (549)
.++|+|+.+.||+ ..++.+.++||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 6899999999999 5567789999998764
No 418
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.24 E-value=0.00075 Score=66.64 Aligned_cols=139 Identities=15% Similarity=0.057 Sum_probs=71.2
Q ss_pred CeeeeeCCeE-EEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccC--CCccceEEEEecCCceeeEeeccCCC
Q 008893 233 NLVGKGGFGN-VYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH--RNLLRLIGFCMTTTERLLVYPYMSNG 309 (549)
Q Consensus 233 ~~iG~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 309 (549)
+.|+.|.... +|+....+|+.+++|....... ..+..|+.++..+.. -.+.+++.+.... -+++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCc
Confidence 4455555444 6677654467777776543221 123456666666542 2345667664333 37899998765
Q ss_pred chhhhhc---------------------cC-----CCCCHHHHH-------H-H------------HHHHHHHHHHhhh-
Q 008893 310 SVASRLK---------------------AK-----PSLDWATRK-------R-I------------ALGAARGLLYLHE- 342 (549)
Q Consensus 310 ~L~~~l~---------------------~~-----~~l~~~~~~-------~-i------------~~~i~~~L~~LH~- 342 (549)
.+.+.+. .. +.++..... . + ...+...+..+.+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 5543221 10 112111100 0 0 0011112222211
Q ss_pred --cCCCceEecccCcCeeeecCC----CceEEeeccccccc
Q 008893 343 --QCDPKIIHRDVKAANILLDEY----YEAVVGDFGLAKLL 377 (549)
Q Consensus 343 --~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~~~~~ 377 (549)
...+.++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 124589999999999999874 68899999988643
No 419
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.24 E-value=0.0012 Score=67.54 Aligned_cols=72 Identities=15% Similarity=0.178 Sum_probs=49.2
Q ss_pred CeeeeeCCeEEEEEEECC--------CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCc-cceEEEEecCCceeeEe
Q 008893 233 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLVY 303 (549)
Q Consensus 233 ~~iG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ 303 (549)
+.|+.|....+|+....+ ++.+++|+.... .....+..|..++..+...++ .++++.+.+ .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 567888889999998753 578999988432 112355578888888754444 566665532 3899
Q ss_pred eccCCCch
Q 008893 304 PYMSNGSV 311 (549)
Q Consensus 304 e~~~~g~L 311 (549)
||+++.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 420
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.22 E-value=0.0017 Score=58.74 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=63.7
Q ss_pred Cchhhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeecCCCceEEeecccccccCCCCCceeec
Q 008893 309 GSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA 387 (549)
Q Consensus 309 g~L~~~l~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 387 (549)
-+|.+.|. .+.+++++++|.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------------
Confidence 47888887 456899999999999999998776211111 1233457889999999988753 1110
Q ss_pred cccccCccCchhhccCCCCCcccchhHhHHHHHHHh
Q 008893 388 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 423 (549)
Q Consensus 388 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt 423 (549)
.....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 1223456888763 345678899999999999875
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.21 E-value=0.0021 Score=63.12 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=80.5
Q ss_pred CeeeeeCCeEEEEEEECCCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCC--ccceEEE-----EecCCceeeEeec
Q 008893 233 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGF-----CMTTTERLLVYPY 305 (549)
Q Consensus 233 ~~iG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~e~ 305 (549)
..++ |....||+....+|+.+++|+..... .....+..|..++..+.... +.+++.. ....+..+++|+|
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 3466 88889999887778789999986432 12446677888877764222 3444432 1123455789999
Q ss_pred cCCCchhh-----------h---hc----c-----CCCCCHHHH----HHH---------------HHHHHHHHHHhhhc
Q 008893 306 MSNGSVAS-----------R---LK----A-----KPSLDWATR----KRI---------------ALGAARGLLYLHEQ 343 (549)
Q Consensus 306 ~~~g~L~~-----------~---l~----~-----~~~l~~~~~----~~i---------------~~~i~~~L~~LH~~ 343 (549)
++|..+.. . ++ . ....++... ..+ ...+...+..+.+.
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 98754321 0 11 0 011222211 001 01111122222221
Q ss_pred ----CCCceEecccCcCeeeecCCCceEEeecccccc
Q 008893 344 ----CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 376 (549)
Q Consensus 344 ----~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 376 (549)
....++|||+++.||+++ + .+.|+||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234789999999999999 4 899999987753
No 422
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.19 E-value=2.5e-05 Score=83.86 Aligned_cols=96 Identities=10% Similarity=0.038 Sum_probs=58.6
Q ss_pred cCccccc-----CCcccCCCCCCCEEEccCC--cCCCCCcccccC-CcccCeeeccCccccc-CCCcccccCCCCceEec
Q 008893 32 NNNISGH-----IPTEIGKLSKLLTLDLSNN--FFTGPIPSTVSH-LETLQYLRLNNNSLTG-AIPPSLSNMSQLAFLDL 102 (549)
Q Consensus 32 ~n~l~~~-----~p~~~~~l~~L~~L~ls~N--~l~g~~p~~~~~-l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~l~l 102 (549)
.|.+++. ++..+.++++|+.|+|++| .+++..+..+.. +++|+.|+|++|++++ .++..+..+++|+.|+|
T Consensus 416 ~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l 495 (592)
T 3ogk_B 416 EERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEM 495 (592)
T ss_dssp CSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEE
T ss_pred CccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeec
Confidence 5666653 3333566777888887643 355444444433 6778888888777765 34445566777888888
Q ss_pred cCCCCCCCC-Ccc-----ccccccccCCccc
Q 008893 103 SYNNLSGPV-PSF-----HAKTFNITGNSLI 127 (549)
Q Consensus 103 ~~N~l~~~~-p~~-----~~~~~~l~~N~~~ 127 (549)
++|.+++.. +.. ..+.+++++|.++
T Consensus 496 ~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 496 RGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp ESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred cCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 888775432 111 1255677777753
No 423
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.14 E-value=0.0026 Score=63.79 Aligned_cols=137 Identities=16% Similarity=0.158 Sum_probs=81.9
Q ss_pred CeeeeeCCeEEEEEEEC--------CCCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCC-ccceEEEEecCCceeeEe
Q 008893 233 NLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN-LLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 233 ~~iG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 303 (549)
+.+..|-...+|+.... +++.+++|+.... ......+.+|..+++.+...+ ..++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45667888899998864 2578999986332 223456678999988775333 3556666543 3999
Q ss_pred eccCCCchhhh-----------------hccC-----CCCC--HHHHHHHHHHHHH-------------------HHHHh
Q 008893 304 PYMSNGSVASR-----------------LKAK-----PSLD--WATRKRIALGAAR-------------------GLLYL 340 (549)
Q Consensus 304 e~~~~g~L~~~-----------------l~~~-----~~l~--~~~~~~i~~~i~~-------------------~L~~L 340 (549)
||++|..+... ++.. .... |.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99997655311 1111 1122 4455555544322 12333
Q ss_pred hh-----cCCCceEecccCcCeeeecCC----CceEEeeccccc
Q 008893 341 HE-----QCDPKIIHRDVKAANILLDEY----YEAVVGDFGLAK 375 (549)
Q Consensus 341 H~-----~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~~~ 375 (549)
.+ .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 21 123479999999999999876 789999999875
No 424
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.08 E-value=0.00014 Score=72.67 Aligned_cols=65 Identities=17% Similarity=0.187 Sum_probs=37.8
Q ss_pred CCCCCCEEEccC--CcCCCC-----Ccccc--cCCcccCeeeccCcccccCCCcccc---cCCCCceEeccCCCCCC
Q 008893 45 KLSKLLTLDLSN--NFFTGP-----IPSTV--SHLETLQYLRLNNNSLTGAIPPSLS---NMSQLAFLDLSYNNLSG 109 (549)
Q Consensus 45 ~l~~L~~L~ls~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~l~l~~N~l~~ 109 (549)
.+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|.+
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 577777777753 221111 11122 2367788888877777643333333 36677888888777765
No 425
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.03 E-value=0.00021 Score=76.55 Aligned_cols=99 Identities=8% Similarity=0.015 Sum_probs=72.3
Q ss_pred ccceeeeeeeeee-cCCc--------eeehhhhcccCccccc----CCcccCCCCCCCEEEccCCcCCC----CCccccc
Q 008893 6 EKVLIIVLIQVIC-SDGV--------FFSFGRLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTG----PIPSTVS 68 (549)
Q Consensus 6 ~~~~~~~~~~~~c-~~~~--------~~~~~l~l~~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~g----~~p~~~~ 68 (549)
.+|+.|+|.++.- ++.. .....++|++|.+++. ++..+.++++|+.|+|++|.+++ .++..+.
T Consensus 138 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 138 DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred ccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 3488888876541 1111 1223467899988765 44456678999999999999973 3455567
Q ss_pred CCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 69 HLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 69 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
++++|+.|+|++|.+.+ +|..+..+++|+.|+++++
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 88999999999999985 7788888889999888753
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.97 E-value=0.00085 Score=56.30 Aligned_cols=56 Identities=20% Similarity=0.194 Sum_probs=44.2
Q ss_pred hhhcccCccc-ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccc
Q 008893 27 GRLLQNNNIS-GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLT 84 (549)
Q Consensus 27 ~l~l~~n~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 84 (549)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4567777775 35565442 47999999999999666667899999999999999886
No 427
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.93 E-value=0.0031 Score=63.19 Aligned_cols=73 Identities=10% Similarity=0.055 Sum_probs=44.2
Q ss_pred CeeeeeCCeEEEEEEECC---------CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCc-cceEEEEecCCceeeE
Q 008893 233 NLVGKGGFGNVYKGYLQD---------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLV 302 (549)
Q Consensus 233 ~~iG~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv 302 (549)
..++.|....+|+....+ ++.+++|+...... .......|..++..+...++ .++++.. .-++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence 456788889999998754 26888998754321 11123577888877754343 4666544 23789
Q ss_pred eeccCCCch
Q 008893 303 YPYMSNGSV 311 (549)
Q Consensus 303 ~e~~~~g~L 311 (549)
|||+++..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.91 E-value=0.00014 Score=64.31 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=32.7
Q ss_pred hhhhcccCcccccCCcccCCCCCCCEEEccCCc-CCCCCcccccCC----cccCeeeccCcc-cccCCCcccccCCCCce
Q 008893 26 FGRLLQNNNISGHIPTEIGKLSKLLTLDLSNNF-FTGPIPSTVSHL----ETLQYLRLNNNS-LTGAIPPSLSNMSQLAF 99 (549)
Q Consensus 26 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~~p~~~~~l~~L~~ 99 (549)
..++|+++.|+..--..+.+|++|+.|+|+++. |+..--..++.+ ++|+.|+|+++. |+..--..+..+++|+.
T Consensus 64 ~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~ 143 (176)
T 3e4g_A 64 QAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKY 143 (176)
T ss_dssp EEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCE
T ss_pred eEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCE
Confidence 334444444432222234455555555555542 331111122222 245555555542 44211123444555555
Q ss_pred EeccCC
Q 008893 100 LDLSYN 105 (549)
Q Consensus 100 l~l~~N 105 (549)
|+|++.
T Consensus 144 L~L~~c 149 (176)
T 3e4g_A 144 LFLSDL 149 (176)
T ss_dssp EEEESC
T ss_pred EECCCC
Confidence 555543
No 429
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.87 E-value=0.0074 Score=62.13 Aligned_cols=74 Identities=9% Similarity=0.063 Sum_probs=47.4
Q ss_pred CCeeeeeCCeEEEEEEECC-CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCCc-cceEEEEecCCceeeEeeccCCC
Q 008893 232 KNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLVYPYMSNG 309 (549)
Q Consensus 232 ~~~iG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g 309 (549)
.+.|+.|-...+|+....+ +..+++|+...... .......|..++..+...++ .++++++. + .+|+||+++.
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~--~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD--EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC--SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh--hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 3567888889999998865 47888998754321 11123578888888865444 46677662 2 3599999875
Q ss_pred ch
Q 008893 310 SV 311 (549)
Q Consensus 310 ~L 311 (549)
++
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 430
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.62 E-value=0.00011 Score=78.63 Aligned_cols=83 Identities=12% Similarity=0.115 Sum_probs=59.1
Q ss_pred cCCCCCCCEEEccCCcCCCCCcccccC-CcccCeeeccCcccccCCCccc-ccCCCCceEeccCCCCCCCCCcc------
Q 008893 43 IGKLSKLLTLDLSNNFFTGPIPSTVSH-LETLQYLRLNNNSLTGAIPPSL-SNMSQLAFLDLSYNNLSGPVPSF------ 114 (549)
Q Consensus 43 ~~~l~~L~~L~ls~N~l~g~~p~~~~~-l~~L~~L~l~~N~l~g~~p~~~-~~l~~L~~l~l~~N~l~~~~p~~------ 114 (549)
+.++++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.....
T Consensus 428 ~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~ 506 (594)
T 2p1m_B 428 VEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLE 506 (594)
T ss_dssp HHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGG
T ss_pred HhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCC
Confidence 66788899999977 666555555655 7889999999998876555444 66888999999999885433221
Q ss_pred ccccccccCCcc
Q 008893 115 HAKTFNITGNSL 126 (549)
Q Consensus 115 ~~~~~~l~~N~~ 126 (549)
..+.+++++|++
T Consensus 507 ~L~~L~l~~~~~ 518 (594)
T 2p1m_B 507 TMRSLWMSSCSV 518 (594)
T ss_dssp GSSEEEEESSCC
T ss_pred CCCEEeeeCCCC
Confidence 125567777765
No 431
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.61 E-value=0.009 Score=59.03 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=28.0
Q ss_pred CCceEecccCcCeeeecCCCceEEeecccccc
Q 008893 345 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 376 (549)
Q Consensus 345 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 376 (549)
...++|+|+.+.||++++++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34799999999999999888899999987754
No 432
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.21 E-value=0.00052 Score=73.44 Aligned_cols=79 Identities=18% Similarity=0.166 Sum_probs=36.3
Q ss_pred hhcccCcccccCCcccC-CCCCCCEEEccCC-cCCCC-CcccccCCcccCeeeccCcccccCCCcccc----cCCCCceE
Q 008893 28 RLLQNNNISGHIPTEIG-KLSKLLTLDLSNN-FFTGP-IPSTVSHLETLQYLRLNNNSLTGAIPPSLS----NMSQLAFL 100 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~-~l~~L~~L~ls~N-~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~----~l~~L~~l 100 (549)
++|++|.+++..+..+. ++++|+.|+|++| .++.. ++..+.++++|+.|+|++|.+++..+..+. .+++|+.|
T Consensus 110 L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L 189 (594)
T 2p1m_B 110 IRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSL 189 (594)
T ss_dssp EEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEE
T ss_pred EEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEE
Confidence 34455555444444443 3555555555555 33311 233333455555555555555433332222 33455555
Q ss_pred eccCCC
Q 008893 101 DLSYNN 106 (549)
Q Consensus 101 ~l~~N~ 106 (549)
++++|.
T Consensus 190 ~l~~~~ 195 (594)
T 2p1m_B 190 NISCLA 195 (594)
T ss_dssp ECTTCC
T ss_pred EecccC
Confidence 555554
No 433
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.12 E-value=0.0062 Score=61.68 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=33.0
Q ss_pred CcccCCCCCCCEEEccCCcCC-----CCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 40 PTEIGKLSKLLTLDLSNNFFT-----GPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 40 p~~~~~l~~L~~L~ls~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
+..|.+|++|+.++|.+|.+. ..-+..|.+|++|+.++|. |+++..-..+|.+|.+|+.+.|.+|
T Consensus 264 ~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 264 SRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp TTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred hhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 445555555555555555443 1223445555555555555 2344333445555555555555433
No 434
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=95.95 E-value=0.0084 Score=60.74 Aligned_cols=80 Identities=9% Similarity=0.000 Sum_probs=62.9
Q ss_pred hcccCccc-----ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEecc
Q 008893 29 LLQNNNIS-----GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLS 103 (549)
Q Consensus 29 ~l~~n~l~-----~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~ 103 (549)
.+.+|.+. ...+..|.+|++|+.++|.+ .++-.-...|.+|++|+.|+|.+| ++..-+.+|.++ +|+.|+++
T Consensus 277 ~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~ 353 (401)
T 4fdw_A 277 TTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVE 353 (401)
T ss_dssp EEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEEC
T ss_pred EeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEc
Confidence 35555543 35567899999999999994 577455678999999999999665 775667789999 99999999
Q ss_pred CCCCCCCC
Q 008893 104 YNNLSGPV 111 (549)
Q Consensus 104 ~N~l~~~~ 111 (549)
+|.+....
T Consensus 354 ~n~~~~l~ 361 (401)
T 4fdw_A 354 GTTPPQVF 361 (401)
T ss_dssp CSSCCBCC
T ss_pred CCCCcccc
Confidence 99776433
No 435
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.67 E-value=0.047 Score=54.93 Aligned_cols=139 Identities=16% Similarity=0.138 Sum_probs=80.4
Q ss_pred CeeeeeCCeEEEEEEECC--------CCEEEEEEcccCCC-----------CCcH------HHHHHHHHHHhhccCCC-c
Q 008893 233 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNA-----------IGGE------IQFQTEVEMISLAVHRN-L 286 (549)
Q Consensus 233 ~~iG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~-----------~~~~------~~~~~e~~~l~~l~h~n-i 286 (549)
+.|..|-...+|+....+ +..|.+++.-.... .+.. .....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988653 36788888754321 1111 12234888888775333 4
Q ss_pred cceEEEEecCCceeeEeeccCCCchhh--h---------------hccC-----CCCC--HHHHHHHHHHHH--------
Q 008893 287 LRLIGFCMTTTERLLVYPYMSNGSVAS--R---------------LKAK-----PSLD--WATRKRIALGAA-------- 334 (549)
Q Consensus 287 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~-----~~l~--~~~~~~i~~~i~-------- 334 (549)
.++++++.+ .+|+||+++-+|.. + ++.. .... |....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566766542 28999998754421 1 1111 1122 234444443321
Q ss_pred --------------HHHH----Hhhhc-CCCceEecccCcCeeeecCC------CceEEeeccccc
Q 008893 335 --------------RGLL----YLHEQ-CDPKIIHRDVKAANILLDEY------YEAVVGDFGLAK 375 (549)
Q Consensus 335 --------------~~L~----~LH~~-~~~~ivH~Dlkp~Nill~~~------~~~kl~Dfg~~~ 375 (549)
.-+. +|... ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1121 22221 23478999999999999876 789999998775
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.14 E-value=0.0062 Score=53.63 Aligned_cols=71 Identities=14% Similarity=0.191 Sum_probs=50.9
Q ss_pred cCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcc-cccCCCcccccC----CCCceEeccCCC-CC
Q 008893 38 HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS-LTGAIPPSLSNM----SQLAFLDLSYNN-LS 108 (549)
Q Consensus 38 ~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~l~l~~N~-l~ 108 (549)
.+|.....--+|+.|||+++.++..--..+..+++|+.|+|+++. |+..-=..+..+ ++|+.|+|+++. ++
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 345543333579999999999885434567889999999999995 764322345553 479999999974 65
No 437
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.45 E-value=0.22 Score=50.47 Aligned_cols=73 Identities=5% Similarity=0.011 Sum_probs=47.3
Q ss_pred CeeeeeCCeEEEEEEECC--------CCEEEEEEcccCCCCCcHHHHHHHHHHHhhccCCC-ccceEEEEecCCceeeEe
Q 008893 233 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN-LLRLIGFCMTTTERLLVY 303 (549)
Q Consensus 233 ~~iG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 303 (549)
+.+..|-...+|+....+ ++.+++|+...... ......+|..+++.+...+ ..++++.+. -+.|+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~--~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG--KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc--hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 456678889999998763 57899998754321 1112457888887775333 345555332 37899
Q ss_pred eccCCCch
Q 008893 304 PYMSNGSV 311 (549)
Q Consensus 304 e~~~~g~L 311 (549)
||+++..|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 438
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=94.42 E-value=0.0057 Score=60.95 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=60.9
Q ss_pred hhcccCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc--CCcccCeeeccC--cccccC-----CCccc--ccCCC
Q 008893 28 RLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS--HLETLQYLRLNN--NSLTGA-----IPPSL--SNMSQ 96 (549)
Q Consensus 28 l~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~l~~L~~L~l~~--N~l~g~-----~p~~~--~~l~~ 96 (549)
|.|++|.-. .+++ +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...|. +...+ ..+++
T Consensus 177 L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~ 253 (362)
T 2ra8_A 177 LKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPN 253 (362)
T ss_dssp EEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTT
T ss_pred EEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCC
Confidence 446565211 2343 43 89999999999988743333443 789999999864 332222 11223 24789
Q ss_pred CceEeccCCCCCCCCCcc--------ccccccccCCccc
Q 008893 97 LAFLDLSYNNLSGPVPSF--------HAKTFNITGNSLI 127 (549)
Q Consensus 97 L~~l~l~~N~l~~~~p~~--------~~~~~~l~~N~~~ 127 (549)
|+.|+|++|.+.+..+.. ..+.++++.|.+.
T Consensus 254 Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~ 292 (362)
T 2ra8_A 254 LKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLT 292 (362)
T ss_dssp CCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCB
T ss_pred cCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCC
Confidence 999999999987433211 2356788888764
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.84 E-value=0.011 Score=53.08 Aligned_cols=66 Identities=12% Similarity=0.203 Sum_probs=42.1
Q ss_pred cCCCCCCCEEEccCC-cCCC----CCcccccCCcccCeeeccCccccc----CCCcccccCCCCceEeccCCCCC
Q 008893 43 IGKLSKLLTLDLSNN-FFTG----PIPSTVSHLETLQYLRLNNNSLTG----AIPPSLSNMSQLAFLDLSYNNLS 108 (549)
Q Consensus 43 ~~~l~~L~~L~ls~N-~l~g----~~p~~~~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~l~l~~N~l~ 108 (549)
+.+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|.|.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 344567778888775 6641 123345556778888888887762 23334445567888888888876
No 440
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.82 E-value=0.014 Score=37.91 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=19.1
Q ss_pred eeeecchhhhHHHHHhhhhheeccccccccc
Q 008893 166 ALALGSSLGCISLLILGFGFLLWWRQRHNQQ 196 (549)
Q Consensus 166 ~~~~~~~~g~i~~~~~~~~~~~~~r~~~~~~ 196 (549)
.++.+++.|++.++++++++++|+|+|+.++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 3445555556666666666777777766543
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.42 E-value=0.028 Score=50.40 Aligned_cols=80 Identities=13% Similarity=0.115 Sum_probs=56.6
Q ss_pred hhhcccC-ccccc----CCcccCCCCCCCEEEccCCcCCC----CCcccccCCcccCeeeccCcccccC----CCccccc
Q 008893 27 GRLLQNN-NISGH----IPTEIGKLSKLLTLDLSNNFFTG----PIPSTVSHLETLQYLRLNNNSLTGA----IPPSLSN 93 (549)
Q Consensus 27 ~l~l~~n-~l~~~----~p~~~~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~ 93 (549)
.++|++| .|... +...+..-+.|+.|+|++|+|.. .+-..+..-+.|+.|+|++|.|+.. +-.++..
T Consensus 45 ~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~ 124 (197)
T 1pgv_A 45 EVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLV 124 (197)
T ss_dssp EEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTT
T ss_pred EEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhh
Confidence 3567775 66522 34556677899999999999972 2334455668999999999999832 2334555
Q ss_pred CCCCceEeccCCC
Q 008893 94 MSQLAFLDLSYNN 106 (549)
Q Consensus 94 l~~L~~l~l~~N~ 106 (549)
-+.|+.|+|++|.
T Consensus 125 N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 125 TQSIVEFKADNQR 137 (197)
T ss_dssp TCCCSEEECCCCS
T ss_pred CCceeEEECCCCc
Confidence 6679999998753
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.39 E-value=0.068 Score=53.76 Aligned_cols=63 Identities=11% Similarity=0.035 Sum_probs=40.8
Q ss_pred cccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 41 TEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 41 ~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
..|.++.+|+.+.+.++ ++..-...|.++++|+.++|.++ ++..-..+|.+|.+|+.+++..|
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 35667777777777654 44233456777777777777543 55344556777777777777655
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=92.93 E-value=0.092 Score=52.35 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=50.1
Q ss_pred ccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 35 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 35 l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.+|.++..-..+|.+|.+|+.+.|.+|
T Consensus 251 v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 251 VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 44334456778888888888654 44234456788888888888888887555667888888888888654
No 444
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.93 E-value=0.014 Score=37.79 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=18.5
Q ss_pred eeeecchhhhHHHHHhhhhheeccccccccc
Q 008893 166 ALALGSSLGCISLLILGFGFLLWWRQRHNQQ 196 (549)
Q Consensus 166 ~~~~~~~~g~i~~~~~~~~~~~~~r~~~~~~ 196 (549)
.++.+++.|++.+++++.++++|||+|+.++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3444445556666666666677777766554
No 445
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.82 E-value=0.13 Score=51.66 Aligned_cols=67 Identities=12% Similarity=0.138 Sum_probs=45.6
Q ss_pred CCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCCC
Q 008893 39 IPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLS 108 (549)
Q Consensus 39 ~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 108 (549)
-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-..+|.+|.+|+.+.+..| ++
T Consensus 280 ~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~ 346 (394)
T 4gt6_A 280 GTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT 346 (394)
T ss_dssp CTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC
T ss_pred cCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC
Confidence 34567778888888886 3455344456778888888888654 55344567888888888887654 44
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.06 E-value=0.67 Score=46.57 Aligned_cols=29 Identities=31% Similarity=0.441 Sum_probs=24.8
Q ss_pred ceEecccCcCeeee------cCCCceEEeeccccc
Q 008893 347 KIIHRDVKAANILL------DEYYEAVVGDFGLAK 375 (549)
Q Consensus 347 ~ivH~Dlkp~Nill------~~~~~~kl~Dfg~~~ 375 (549)
.++|+|+.+.||++ +++..+.++||-+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 46799999999999 456789999998875
No 447
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=90.29 E-value=0.047 Score=35.22 Aligned_cols=29 Identities=17% Similarity=0.434 Sum_probs=17.7
Q ss_pred eeecchhhhHHHHHhhhhheecccccccc
Q 008893 167 LALGSSLGCISLLILGFGFLLWWRQRHNQ 195 (549)
Q Consensus 167 ~~~~~~~g~i~~~~~~~~~~~~~r~~~~~ 195 (549)
.+++.++|++++++++.++++|+|||+.+
T Consensus 13 ~Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 13 SIISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred chHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 35556666555566666666677766544
No 448
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=89.45 E-value=0.57 Score=46.86 Aligned_cols=66 Identities=9% Similarity=0.109 Sum_probs=47.2
Q ss_pred cCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 38 HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 38 ~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.-..+|.++++|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-..+|.+|.+|+.++|.+|
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~ 321 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG 321 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc
Confidence 33456788888888888776544 445667888888888885 4555345567888888888888654
No 449
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=88.73 E-value=0.5 Score=46.87 Aligned_cols=79 Identities=11% Similarity=0.040 Sum_probs=56.7
Q ss_pred ccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCCCCCCCCCcc
Q 008893 35 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF 114 (549)
Q Consensus 35 l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 114 (549)
+...-...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+.+|.++......
T Consensus 228 ~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~a 305 (379)
T 4h09_A 228 VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRV 305 (379)
T ss_dssp CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTT
T ss_pred eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhh
Confidence 33334556788899999999876 55344567888899999988654 55344567888999999999888877554444
Q ss_pred c
Q 008893 115 H 115 (549)
Q Consensus 115 ~ 115 (549)
|
T Consensus 306 F 306 (379)
T 4h09_A 306 F 306 (379)
T ss_dssp T
T ss_pred h
Confidence 4
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.14 E-value=1.5 Score=39.56 Aligned_cols=116 Identities=10% Similarity=0.057 Sum_probs=78.1
Q ss_pred cCCCccceEEEEecCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEecccCcCeeeec
Q 008893 282 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD 361 (549)
Q Consensus 282 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 361 (549)
.||+++.. .+-...+...+.++.-+.+.=...++ .++...+++++.+|+....+++.. +|--|.|+|++++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik---~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~ 113 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK---SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFT 113 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG---GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEEC
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH---hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEc
Confidence 58888766 45556666666665544222222232 477899999999999888777654 7889999999999
Q ss_pred CCCceEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccc
Q 008893 362 EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 429 (549)
Q Consensus 362 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~ 429 (549)
.++.+++.-.|+...+.+.. .++..=.-.+=+++..+++++..|+
T Consensus 114 ~~~~p~i~~RGik~~l~P~~-----------------------~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 114 RDGLPIAKTRGLQNVVDPLP-----------------------VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp TTSCEEESCCEETTTBSCCC-----------------------CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCEEEEEccCccCCCCCC-----------------------CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999998877654332110 1111123356678888999988876
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=88.14 E-value=2.1 Score=38.73 Aligned_cols=115 Identities=15% Similarity=0.098 Sum_probs=77.2
Q ss_pred cCCCccceEEEEecCCceeeEeeccCCCchhhhhccCCCCCHHHHHHHHHHHHHHHH-HhhhcCCCceEecccCcCeeee
Q 008893 282 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLL-YLHEQCDPKIIHRDVKAANILL 360 (549)
Q Consensus 282 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlkp~Nill 360 (549)
.||++ -..+-...+...+.++--+++.=...++ .++...+++++.+|+.... +++.. +|--|+|+|+++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~---~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f 117 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR---KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMF 117 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH---TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH---hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEE
Confidence 57777 4444466677777776654433333332 4788999999999998777 66654 788899999999
Q ss_pred cCCCceEEeecccccccCCCCCceeeccccccCccCchhhccCCCCCcccchhHhHHHHHHHhCCcccc
Q 008893 361 DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 429 (549)
Q Consensus 361 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~ 429 (549)
|.++.++|.-.|+-..+.+.. +.+|-+ .-.+=+++..++.++..|+
T Consensus 118 ~~~~~p~i~hRGi~~~lpP~e-------------~~ee~f----------l~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 118 NRALEPFFLHVGVKESLPPDE-------------WDDERL----------LREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CTTCCEEESCCEETTTBSSCS-------------CCHHHH----------HHHHHHHHHHHTTCSSCHH
T ss_pred eCCCcEEEEEcCCcccCCCCC-------------CCHHHH----------HHHHHHHHHHHHcCCCCHH
Confidence 999999998887654332111 111211 2355677788888877765
No 452
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=87.15 E-value=0.7 Score=46.15 Aligned_cols=64 Identities=14% Similarity=0.057 Sum_probs=42.7
Q ss_pred cCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccCC
Q 008893 38 HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 105 (549)
Q Consensus 38 ~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 105 (549)
.....|.++..|+.+.+..+.+. ...|..+.+|+.+.+.+| ++..-..+|.++.+|+.++|.++
T Consensus 267 i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~ 330 (394)
T 4fs7_A 267 IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL 330 (394)
T ss_dssp ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc
Confidence 34456777777877777766543 345677778888877654 55344566777888888877644
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.46 E-value=0.31 Score=50.06 Aligned_cols=62 Identities=6% Similarity=-0.016 Sum_probs=18.4
Q ss_pred CCCeeeeeCCeEEEEEEECC-CCEEEE------EEcccCCCC-CcHHHHHHHHHHHhhccCCCccceEEEEec
Q 008893 231 SKNLVGKGGFGNVYKGYLQD-GTVVAV------KRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT 295 (549)
Q Consensus 231 ~~~~iG~G~~g~Vy~~~~~~-g~~vav------K~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 295 (549)
..+.|| ||.||+|.+.. ...||| |..+..... .....|.+|..+....+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 456666 99999999864 367888 766543322 222357788888888899999999887653
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=74.34 E-value=0.55 Score=29.95 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=10.9
Q ss_pred eecchhhhHHHHHhhhhheeccccc
Q 008893 168 ALGSSLGCISLLILGFGFLLWWRQR 192 (549)
Q Consensus 168 ~~~~~~g~i~~~~~~~~~~~~~r~~ 192 (549)
+.+++.|++.++++...++++||||
T Consensus 16 ~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 16 IGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred EeehhHHHHHHHHHHHHheeEeeec
Confidence 3344444444332344445555543
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=69.41 E-value=0.87 Score=27.70 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=14.8
Q ss_pred eecchhhhHHHHHhhhhheecccccc
Q 008893 168 ALGSSLGCISLLILGFGFLLWWRQRH 193 (549)
Q Consensus 168 ~~~~~~g~i~~~~~~~~~~~~~r~~~ 193 (549)
+.+.++|.+.+++++.++.+|+|+|+
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr~ 35 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRRR 35 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHCC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeecC
Confidence 33445555555566666666777653
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=61.34 E-value=1.5 Score=27.41 Aligned_cols=26 Identities=12% Similarity=-0.064 Sum_probs=12.1
Q ss_pred eeeecchhhhHHHHH-hhhhheecccc
Q 008893 166 ALALGSSLGCISLLI-LGFGFLLWWRQ 191 (549)
Q Consensus 166 ~~~~~~~~g~i~~~~-~~~~~~~~~r~ 191 (549)
..+.++++|++..++ ++...+++|||
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CceeeeehHHHHHHHHHHHHHHHHeec
Confidence 344566666554333 33333444544
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=53.37 E-value=28 Score=26.81 Aligned_cols=46 Identities=13% Similarity=0.059 Sum_probs=26.4
Q ss_pred cccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccCeeeccC
Q 008893 34 NISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 80 (549)
Q Consensus 34 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 80 (549)
.++..-...|.+|++|+.+.|..+ ++..-...|.+|.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344344456667777777766654 3323344566666666666644
No 458
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=41.08 E-value=1.9 Score=25.67 Aligned_cols=25 Identities=32% Similarity=0.615 Sum_probs=13.5
Q ss_pred eecchhhhHHHHHhhhhheeccccc
Q 008893 168 ALGSSLGCISLLILGFGFLLWWRQR 192 (549)
Q Consensus 168 ~~~~~~g~i~~~~~~~~~~~~~r~~ 192 (549)
.+.+++|.+++.++..+.+++||-|
T Consensus 9 alt~i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 9 ALTVIAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCceeEEEccc
Confidence 3445556555555445556666644
No 459
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=47.18 E-value=5.7 Score=24.56 Aligned_cols=14 Identities=14% Similarity=0.470 Sum_probs=6.8
Q ss_pred Hhhhhheecccccc
Q 008893 180 ILGFGFLLWWRQRH 193 (549)
Q Consensus 180 ~~~~~~~~~~r~~~ 193 (549)
+..++.++.|+++.
T Consensus 23 isLIiLi~~w~qKP 36 (39)
T 2l6w_A 23 ISLIILIMLWQKKP 36 (39)
Confidence 33334455566554
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.99 E-value=38 Score=26.02 Aligned_cols=47 Identities=15% Similarity=0.026 Sum_probs=35.5
Q ss_pred CcCCCCCcccccCCcccCeeeccCcccccCCCcccccCCCCceEeccC
Q 008893 57 NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 104 (549)
Q Consensus 57 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 104 (549)
..++..-...|.++++|+.+.|-.+ ++..-..+|.+|.+|+.+.+..
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3455455677899999999999765 4435567899999999988755
No 461
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=20.75 E-value=20 Score=21.44 Aligned_cols=24 Identities=17% Similarity=0.140 Sum_probs=12.1
Q ss_pred eecchhhhHHHHHhhhhheecccc
Q 008893 168 ALGSSLGCISLLILGFGFLLWWRQ 191 (549)
Q Consensus 168 ~~~~~~g~i~~~~~~~~~~~~~r~ 191 (549)
+.+++++.+...++.+..++||+|
T Consensus 9 IaGIVvgdi~~t~~i~~~vy~~~r 32 (33)
T 2l34_A 9 LAGIVVGDLVLTVLIALAVYFLGR 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEeEeHHHHHHHHHHHHHHhheec
Confidence 345555555554444444555543
Done!