Query 008895
Match_columns 549
No_of_seqs 200 out of 2889
Neff 10.2
Searched_HMMs 46136
Date Thu Mar 28 17:55:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008895.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008895hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.8E-83 3.8E-88 647.5 49.2 483 59-545 34-535 (537)
2 KOG1177 Long chain fatty acid 100.0 6.2E-79 1.3E-83 571.5 40.8 498 38-542 50-587 (596)
3 COG0365 Acs Acyl-coenzyme A sy 100.0 1.2E-78 2.7E-83 608.8 44.3 492 38-542 8-522 (528)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 3.7E-77 8.1E-82 623.9 51.1 499 37-542 10-527 (534)
5 PLN02574 4-coumarate--CoA liga 100.0 1.4E-75 3.1E-80 619.3 58.2 531 6-544 9-556 (560)
6 PLN02654 acetate-CoA ligase 100.0 6.1E-73 1.3E-77 607.5 51.9 498 36-542 85-640 (666)
7 PRK07788 acyl-CoA synthetase; 100.0 6.4E-73 1.4E-77 598.6 51.1 482 39-539 50-548 (549)
8 PLN02246 4-coumarate--CoA liga 100.0 5.2E-72 1.1E-76 590.1 56.3 513 20-542 8-536 (537)
9 PLN02860 o-succinylbenzoate-Co 100.0 1.4E-72 3E-77 596.8 49.0 495 36-544 5-556 (563)
10 TIGR02316 propion_prpE propion 100.0 3.3E-72 7.1E-77 600.5 51.8 501 37-544 50-606 (628)
11 PTZ00237 acetyl-CoA synthetase 100.0 2.4E-72 5.1E-77 601.1 49.8 501 36-544 56-625 (647)
12 PLN02330 4-coumarate--CoA liga 100.0 1.9E-71 4.1E-76 586.7 54.2 518 19-544 12-543 (546)
13 PRK06334 long chain fatty acid 100.0 5.3E-72 1.1E-76 588.1 49.4 487 38-541 19-534 (539)
14 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2.4E-71 5.3E-76 594.7 53.7 498 38-543 56-603 (625)
15 PRK07529 AMP-binding domain pr 100.0 5.1E-71 1.1E-75 590.8 54.1 498 35-543 22-571 (632)
16 PRK00174 acetyl-CoA synthetase 100.0 2E-70 4.2E-75 588.6 54.2 499 37-543 65-611 (637)
17 PRK05677 long-chain-fatty-acid 100.0 2.3E-70 5E-75 580.1 53.1 496 38-544 24-559 (562)
18 PRK13295 cyclohexanecarboxylat 100.0 4.8E-70 1E-74 576.1 54.4 496 38-543 24-545 (547)
19 COG1021 EntE Peptide arylation 100.0 1.5E-72 3.2E-77 516.7 29.8 495 38-544 28-540 (542)
20 PRK06839 acyl-CoA synthetase; 100.0 3.3E-70 7.2E-75 571.8 49.3 487 39-542 3-495 (496)
21 PRK13382 acyl-CoA synthetase; 100.0 4.7E-70 1E-74 574.3 50.2 482 38-538 43-536 (537)
22 PRK08314 long-chain-fatty-acid 100.0 9.8E-70 2.1E-74 574.6 52.6 493 38-544 10-544 (546)
23 PRK06060 acyl-CoA synthetase; 100.0 4.5E-70 9.7E-75 591.7 49.1 481 38-541 4-491 (705)
24 PLN02736 long-chain acyl-CoA s 100.0 6E-70 1.3E-74 585.0 47.9 492 37-542 43-641 (651)
25 PRK07638 acyl-CoA synthetase; 100.0 1.9E-69 4.1E-74 564.1 49.7 484 38-545 1-484 (487)
26 PRK10524 prpE propionyl-CoA sy 100.0 3E-69 6.5E-74 579.0 51.7 500 37-543 51-606 (629)
27 PRK06145 acyl-CoA synthetase; 100.0 5.7E-69 1.2E-73 562.4 52.0 491 38-541 2-496 (497)
28 PRK04319 acetyl-CoA synthetase 100.0 6.4E-69 1.4E-73 570.0 51.1 493 38-542 42-559 (570)
29 PRK06155 crotonobetaine/carnit 100.0 2.8E-68 6E-73 561.1 54.3 490 38-544 21-526 (542)
30 PRK05605 long-chain-fatty-acid 100.0 1.2E-68 2.5E-73 569.0 51.7 496 38-543 32-570 (573)
31 PRK07769 long-chain-fatty-acid 100.0 2.3E-69 5.1E-74 579.6 46.5 494 37-545 20-617 (631)
32 PRK07656 long-chain-fatty-acid 100.0 1.1E-68 2.4E-73 562.9 50.7 491 38-539 5-513 (513)
33 PRK03584 acetoacetyl-CoA synth 100.0 1.4E-68 3.1E-73 575.6 52.6 497 36-545 84-628 (655)
34 PRK09274 peptide synthase; Pro 100.0 2.9E-69 6.3E-74 571.3 46.4 491 38-543 6-549 (552)
35 PRK07786 long-chain-fatty-acid 100.0 2.6E-68 5.7E-73 562.2 53.4 498 34-543 13-525 (542)
36 PRK05852 acyl-CoA synthetase; 100.0 1.1E-68 2.3E-73 564.5 50.2 495 38-542 16-532 (534)
37 PRK03640 O-succinylbenzoic aci 100.0 1.3E-68 2.7E-73 557.9 50.2 481 38-542 2-482 (483)
38 PRK05857 acyl-CoA synthetase; 100.0 7E-69 1.5E-73 565.7 48.1 498 38-544 14-533 (540)
39 PLN03052 acetate--CoA ligase; 100.0 2.6E-68 5.6E-73 573.0 52.6 505 36-549 172-728 (728)
40 PLN02614 long-chain acyl-CoA s 100.0 3.4E-69 7.4E-74 577.4 45.4 492 38-542 45-649 (666)
41 PRK08315 AMP-binding domain pr 100.0 4E-68 8.8E-73 563.9 52.6 499 38-542 16-551 (559)
42 TIGR01217 ac_ac_CoA_syn acetoa 100.0 5.2E-68 1.1E-72 568.6 53.0 494 36-543 85-627 (652)
43 PRK07867 acyl-CoA synthetase; 100.0 1.5E-67 3.2E-72 553.5 54.1 488 38-545 5-510 (529)
44 PRK07470 acyl-CoA synthetase; 100.0 6E-68 1.3E-72 558.5 51.2 498 36-545 5-521 (528)
45 PRK12583 acyl-CoA synthetase; 100.0 7.3E-68 1.6E-72 562.0 52.0 499 38-543 18-553 (558)
46 PRK07514 malonyl-CoA synthase; 100.0 9.6E-68 2.1E-72 554.2 51.6 490 38-542 3-501 (504)
47 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.3E-67 2.9E-72 555.2 52.1 487 37-537 22-527 (527)
48 PLN03102 acyl-activating enzym 100.0 6.8E-68 1.5E-72 561.8 50.0 493 37-542 13-554 (579)
49 PRK08316 acyl-CoA synthetase; 100.0 9.4E-68 2E-72 557.1 50.3 493 38-542 11-519 (523)
50 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.3E-67 5E-72 554.8 52.1 491 38-538 22-538 (538)
51 PRK09088 acyl-CoA synthetase; 100.0 1.6E-67 3.4E-72 550.0 50.3 474 56-543 9-486 (488)
52 PRK06187 long-chain-fatty-acid 100.0 2.4E-67 5.2E-72 553.9 51.6 494 37-543 5-520 (521)
53 PRK13388 acyl-CoA synthetase; 100.0 3.4E-67 7.3E-72 552.6 52.5 486 38-544 3-508 (540)
54 PRK12467 peptide synthase; Pro 100.0 1.6E-68 3.4E-73 658.9 49.1 487 38-542 3095-3594(3956)
55 PLN02861 long-chain-fatty-acid 100.0 7.1E-68 1.5E-72 567.8 46.3 491 38-542 43-646 (660)
56 TIGR03098 ligase_PEP_1 acyl-Co 100.0 5.7E-67 1.2E-71 550.0 51.5 485 40-538 2-514 (515)
57 PRK06087 short chain acyl-CoA 100.0 4.6E-67 1E-71 553.9 50.3 494 38-543 23-537 (547)
58 PTZ00342 acyl-CoA synthetase; 100.0 2.3E-67 4.9E-72 561.6 47.6 512 18-541 42-733 (746)
59 PRK12492 long-chain-fatty-acid 100.0 1.2E-66 2.5E-71 551.8 52.3 492 38-540 24-562 (562)
60 PRK07059 Long-chain-fatty-acid 100.0 1.5E-66 3.2E-71 551.0 53.0 508 20-539 3-555 (557)
61 PRK12476 putative fatty-acid-- 100.0 1.9E-67 4.1E-72 562.4 46.4 493 38-546 34-610 (612)
62 PRK06188 acyl-CoA synthetase; 100.0 8.8E-67 1.9E-71 549.1 50.3 497 38-546 12-521 (524)
63 PRK06710 long-chain-fatty-acid 100.0 1.6E-66 3.5E-71 551.4 52.4 497 38-546 24-559 (563)
64 PRK10252 entF enterobactin syn 100.0 2.7E-67 5.9E-72 608.4 50.3 485 38-540 458-965 (1296)
65 PRK05851 long-chain-fatty-acid 100.0 9.7E-68 2.1E-72 555.1 42.3 484 40-544 4-524 (525)
66 PRK08008 caiC putative crotono 100.0 1.7E-66 3.7E-71 546.2 51.5 489 38-537 7-517 (517)
67 TIGR03443 alpha_am_amid L-amin 100.0 2.1E-67 4.7E-72 611.2 49.1 494 38-540 236-826 (1389)
68 PRK08043 bifunctional acyl-[ac 100.0 4.4E-67 9.5E-72 568.5 48.2 487 38-545 204-716 (718)
69 PRK05620 long-chain-fatty-acid 100.0 1.6E-66 3.6E-71 552.3 50.1 500 38-547 10-562 (576)
70 PRK06178 acyl-CoA synthetase; 100.0 4.9E-66 1.1E-70 548.2 53.7 496 38-542 33-565 (567)
71 PRK13383 acyl-CoA synthetase; 100.0 2.1E-66 4.5E-71 544.7 50.2 478 37-537 34-515 (516)
72 TIGR01734 D-ala-DACP-lig D-ala 100.0 4.1E-66 8.9E-71 541.6 49.5 487 39-541 1-501 (502)
73 PRK10946 entE enterobactin syn 100.0 7.9E-66 1.7E-70 542.3 51.6 491 37-544 24-534 (536)
74 PRK07008 long-chain-fatty-acid 100.0 2.8E-66 6.2E-71 546.1 48.0 496 38-547 10-538 (539)
75 PRK12316 peptide synthase; Pro 100.0 1.1E-66 2.5E-71 652.0 52.3 485 38-541 511-1005(5163)
76 PRK12316 peptide synthase; Pro 100.0 9.2E-67 2E-71 652.9 50.9 488 38-541 2003-2503(5163)
77 PRK06164 acyl-CoA synthetase; 100.0 8.1E-66 1.8E-70 543.8 50.3 493 38-542 10-532 (540)
78 PRK08279 long-chain-acyl-CoA s 100.0 8.7E-66 1.9E-70 549.4 50.5 492 36-543 35-565 (600)
79 PRK08751 putative long-chain f 100.0 1.8E-65 3.8E-70 543.4 52.4 492 38-540 25-558 (560)
80 PRK06018 putative acyl-CoA syn 100.0 1.7E-65 3.7E-70 540.9 51.6 498 36-547 8-539 (542)
81 PRK12467 peptide synthase; Pro 100.0 1.1E-66 2.3E-71 642.7 48.8 489 38-541 1574-2084(3956)
82 PRK13390 acyl-CoA synthetase; 100.0 4.5E-66 9.7E-71 540.7 46.1 476 46-537 5-501 (501)
83 PRK08633 2-acyl-glycerophospho 100.0 8.8E-66 1.9E-70 590.2 49.9 492 38-541 615-1142(1146)
84 PRK07787 acyl-CoA synthetase; 100.0 3.3E-65 7.2E-70 529.4 48.4 453 56-539 14-470 (471)
85 PRK04813 D-alanine--poly(phosp 100.0 1.6E-64 3.5E-69 529.9 50.4 489 38-542 2-503 (503)
86 PRK08180 feruloyl-CoA synthase 100.0 1.3E-65 2.9E-70 548.0 42.5 488 36-542 37-596 (614)
87 PLN02479 acetate-CoA ligase 100.0 1.2E-64 2.7E-69 536.6 49.4 497 38-547 20-563 (567)
88 TIGR03205 pimA dicarboxylate-- 100.0 4.1E-64 8.9E-69 530.4 53.1 487 38-537 21-541 (541)
89 PLN02387 long-chain-fatty-acid 100.0 3.1E-65 6.7E-70 549.6 44.7 493 38-542 58-689 (696)
90 PRK05691 peptide synthase; Val 100.0 6.3E-65 1.4E-69 632.5 51.7 485 38-540 1131-1626(4334)
91 PRK07445 O-succinylbenzoic aci 100.0 6.2E-65 1.4E-69 521.6 42.8 429 68-542 18-447 (452)
92 PRK05691 peptide synthase; Val 100.0 3.3E-65 7.2E-70 634.9 47.9 484 38-540 3720-4226(4334)
93 TIGR02262 benz_CoA_lig benzoat 100.0 1.2E-63 2.6E-68 523.2 51.2 478 48-539 15-508 (508)
94 PRK08974 long-chain-fatty-acid 100.0 2.3E-63 4.9E-68 527.0 53.4 494 38-543 23-556 (560)
95 PRK07798 acyl-CoA synthetase; 100.0 2.2E-63 4.9E-68 525.2 51.7 491 38-542 3-532 (533)
96 PRK07868 acyl-CoA synthetase; 100.0 1E-63 2.2E-68 554.4 51.2 485 35-544 444-960 (994)
97 PTZ00216 acyl-CoA synthetase; 100.0 1.8E-64 3.8E-69 545.2 41.4 490 38-542 69-691 (700)
98 PRK08162 acyl-CoA synthetase; 100.0 5.5E-63 1.2E-67 522.8 51.8 491 38-541 18-538 (545)
99 PLN02430 long-chain-fatty-acid 100.0 1.3E-63 2.8E-68 533.8 46.9 511 19-542 22-646 (660)
100 PRK13391 acyl-CoA synthetase; 100.0 5.2E-63 1.1E-67 518.6 49.4 482 46-543 5-510 (511)
101 PRK08276 long-chain-fatty-acid 100.0 3.3E-63 7.1E-68 519.4 47.5 469 66-545 8-499 (502)
102 PRK12406 long-chain-fatty-acid 100.0 1E-62 2.2E-67 516.4 50.1 474 59-545 3-506 (509)
103 KOG1175 Acyl-CoA synthetase [L 100.0 2.1E-63 4.5E-68 499.1 41.7 501 37-543 62-603 (626)
104 COG1022 FAA1 Long-chain acyl-C 100.0 1.2E-63 2.6E-68 507.3 39.3 480 38-542 16-601 (613)
105 PRK12582 acyl-CoA synthetase; 100.0 2E-63 4.3E-68 532.3 42.2 506 17-541 24-606 (624)
106 PRK06814 acylglycerophosphoeth 100.0 1.3E-62 2.9E-67 561.6 51.5 486 37-542 630-1132(1140)
107 PRK09029 O-succinylbenzoic aci 100.0 1.2E-62 2.5E-67 508.8 45.4 443 48-544 13-455 (458)
108 PLN03051 acyl-activating enzym 100.0 6.2E-63 1.3E-67 515.1 43.4 436 102-542 1-491 (499)
109 PRK09192 acyl-CoA synthetase; 100.0 7.7E-63 1.7E-67 524.2 43.7 493 38-545 21-569 (579)
110 PRK05850 acyl-CoA synthetase; 100.0 1.2E-62 2.6E-67 523.4 43.9 490 38-545 1-571 (578)
111 KOG1256 Long-chain acyl-CoA sy 100.0 9.6E-62 2.1E-66 485.2 42.0 496 35-542 72-680 (691)
112 TIGR01923 menE O-succinylbenzo 100.0 1.4E-60 3.1E-65 490.8 44.3 436 71-536 1-436 (436)
113 PRK08308 acyl-CoA synthetase; 100.0 6.1E-59 1.3E-63 474.2 47.0 407 61-538 2-409 (414)
114 PRK07768 long-chain-fatty-acid 100.0 4.1E-59 8.9E-64 493.0 46.3 487 39-542 3-545 (545)
115 KOG1180 Acyl-CoA synthetase [L 100.0 3.1E-57 6.8E-62 432.4 32.5 492 38-542 41-669 (678)
116 PF00501 AMP-binding: AMP-bind 100.0 1.3E-57 2.9E-62 465.9 28.1 393 44-447 1-417 (417)
117 KOG1179 Very long-chain acyl-C 100.0 1E-54 2.2E-59 417.1 40.7 491 37-540 76-611 (649)
118 TIGR01733 AA-adenyl-dom amino 100.0 1.4E-53 2.9E-58 435.1 38.8 394 71-471 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 1.2E-49 2.5E-54 398.0 36.5 322 188-542 31-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 4.6E-45 9.9E-50 404.9 40.5 455 38-541 427-994 (1452)
121 COG1020 EntF Non-ribosomal pep 100.0 1.3E-42 2.9E-47 374.1 37.9 410 38-464 227-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 3.9E-40 8.6E-45 327.2 29.6 288 192-532 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 9.3E-38 2E-42 318.3 29.1 322 190-534 73-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 2.2E-32 4.8E-37 279.5 34.9 498 38-546 770-1355(1363)
125 KOG1178 Non-ribosomal peptide 100.0 9.6E-33 2.1E-37 291.5 26.0 484 39-540 37-577 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 3.4E-30 7.3E-35 262.7 29.9 325 190-533 84-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 5.8E-28 1.3E-32 233.1 27.3 322 191-533 89-430 (438)
128 TIGR03089 conserved hypothetic 99.9 1.2E-23 2.7E-28 193.6 21.5 205 44-283 2-227 (227)
129 PRK09188 serine/threonine prot 99.9 2.2E-22 4.8E-27 195.6 15.3 119 416-543 207-329 (365)
130 KOG3628 Predicted AMP-binding 99.8 2.9E-19 6.3E-24 184.2 25.5 476 56-546 108-708 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 1E-16 2.2E-21 159.9 23.0 244 194-473 101-365 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.4 7.5E-13 1.6E-17 98.3 6.0 70 455-530 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 99.2 2.8E-09 6.2E-14 104.2 18.9 226 191-441 88-349 (365)
134 PF03321 GH3: GH3 auxin-respon 98.7 5.3E-08 1.1E-12 101.0 10.9 178 306-508 266-467 (528)
135 PLN02249 indole-3-acetic acid- 98.2 0.00033 7.3E-09 73.2 22.5 133 306-462 301-456 (597)
136 PLN02247 indole-3-acetic acid- 98.2 0.00038 8.2E-09 72.2 22.0 137 306-462 292-463 (606)
137 PLN02620 indole-3-acetic acid- 98.0 0.0005 1.1E-08 71.2 19.5 137 306-462 303-469 (612)
138 PF14535 AMP-binding_C_2: AMP- 97.9 1.9E-05 4.1E-10 61.8 4.7 81 448-533 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 94.8 0.2 4.3E-06 50.1 9.6 87 69-157 109-197 (438)
140 TIGR02155 PA_CoA_ligase phenyl 84.6 6.4 0.00014 40.2 9.8 86 69-156 94-181 (422)
141 TIGR03335 F390_ftsA coenzyme F 84.1 8.3 0.00018 39.7 10.4 80 69-152 105-186 (445)
142 TIGR03089 conserved hypothetic 74.9 19 0.00041 33.1 8.6 76 56-143 149-226 (227)
143 PRK06187 long-chain-fatty-acid 71.3 38 0.00083 35.3 11.2 97 56-157 166-270 (521)
144 PRK07656 long-chain-fatty-acid 67.3 32 0.00069 35.9 9.5 97 56-157 165-270 (513)
145 PRK06334 long chain fatty acid 62.8 60 0.0013 34.3 10.5 97 56-156 182-287 (539)
146 PF00501 AMP-binding: AMP-bind 61.4 32 0.00069 34.7 7.9 97 56-156 154-261 (417)
147 PRK04319 acetyl-CoA synthetase 59.2 74 0.0016 33.9 10.6 98 56-157 204-310 (570)
148 PRK08315 AMP-binding domain pr 59.2 85 0.0018 33.2 11.0 83 68-154 217-301 (559)
149 PRK12583 acyl-CoA synthetase; 58.7 1E+02 0.0022 32.6 11.5 95 56-154 200-303 (558)
150 TIGR01733 AA-adenyl-dom amino 57.8 1.1E+02 0.0024 30.5 11.2 98 56-157 119-226 (408)
151 PLN03051 acyl-activating enzym 56.1 91 0.002 32.5 10.4 97 56-156 118-222 (499)
152 cd07050 BMC_EutL_repeat2 ethan 54.1 20 0.00043 26.2 3.3 41 83-123 3-43 (87)
153 PLN02246 4-coumarate--CoA liga 52.9 93 0.002 32.8 10.0 100 56-156 178-286 (537)
154 COG0399 WecE Predicted pyridox 52.6 66 0.0014 32.0 8.0 64 80-148 60-128 (374)
155 TIGR01923 menE O-succinylbenzo 52.0 81 0.0018 32.0 9.1 94 56-156 110-211 (436)
156 PLN02860 o-succinylbenzoate-Co 48.5 1.8E+02 0.0039 30.9 11.3 97 56-157 171-275 (563)
157 KOG1177 Long chain fatty acid 48.5 1.7E+02 0.0036 30.1 9.8 85 68-156 252-338 (596)
158 PRK08308 acyl-CoA synthetase; 48.4 1.4E+02 0.0031 30.0 10.2 96 56-156 100-204 (414)
159 PRK08316 acyl-CoA synthetase; 47.0 1.8E+02 0.0038 30.4 11.0 84 68-156 189-274 (523)
160 TIGR03098 ligase_PEP_1 acyl-Co 46.6 1.6E+02 0.0034 30.7 10.5 85 68-157 179-264 (515)
161 PRK03640 O-succinylbenzoic aci 46.2 1.6E+02 0.0035 30.3 10.4 96 56-156 140-243 (483)
162 PRK06188 acyl-CoA synthetase; 45.8 1.5E+02 0.0033 31.0 10.2 96 56-156 167-269 (524)
163 TIGR02262 benz_CoA_lig benzoat 43.3 1.8E+02 0.0039 30.3 10.3 96 56-154 160-264 (508)
164 PF01041 DegT_DnrJ_EryC1: DegT 42.7 75 0.0016 31.6 6.9 64 80-148 51-119 (363)
165 PRK07008 long-chain-fatty-acid 41.4 1.3E+02 0.0027 31.8 8.8 87 68-156 194-281 (539)
166 TIGR03590 PseG pseudaminic aci 40.5 2.7E+02 0.0059 26.4 10.1 95 67-169 9-112 (279)
167 PRK13295 cyclohexanecarboxylat 40.4 2.9E+02 0.0062 29.1 11.4 96 56-156 196-300 (547)
168 PRK07638 acyl-CoA synthetase; 40.1 2.3E+02 0.005 29.2 10.4 85 68-157 161-246 (487)
169 TIGR02379 ECA_wecE TDP-4-keto- 39.8 1.1E+02 0.0025 30.5 7.6 59 85-148 62-125 (376)
170 PRK08314 long-chain-fatty-acid 39.8 1.7E+02 0.0036 30.8 9.5 95 56-155 189-292 (546)
171 cd01445 TST_Repeats Thiosulfat 39.4 84 0.0018 26.2 5.6 41 80-121 81-124 (138)
172 PF11142 DUF2917: Protein of u 39.3 1.1E+02 0.0023 21.6 5.2 34 390-438 25-58 (63)
173 TIGR02898 spore_YhcN_YlaJ spor 39.1 1.3E+02 0.0028 25.8 6.6 52 454-510 57-109 (158)
174 PRK08043 bifunctional acyl-[ac 38.9 2.5E+02 0.0055 30.9 10.9 93 56-152 364-465 (718)
175 PF01037 AsnC_trans_reg: AsnC 38.0 1.4E+02 0.0031 21.0 6.8 51 451-511 10-60 (74)
176 PRK05620 long-chain-fatty-acid 38.0 2.7E+02 0.0057 29.7 10.7 98 56-155 180-285 (576)
177 TIGR02370 pyl_corrinoid methyl 37.9 2.9E+02 0.0064 24.6 11.4 89 235-325 86-183 (197)
178 PRK07470 acyl-CoA synthetase; 37.8 2.6E+02 0.0056 29.2 10.5 99 56-156 162-268 (528)
179 PRK13237 tyrosine phenol-lyase 37.1 2.2E+02 0.0048 29.3 9.0 70 68-142 76-174 (460)
180 PRK07529 AMP-binding domain pr 36.6 2.3E+02 0.0049 30.7 10.0 98 56-157 212-323 (632)
181 KOG1179 Very long-chain acyl-C 36.4 1.3E+02 0.0029 31.5 7.2 78 76-154 264-343 (649)
182 PF02350 Epimerase_2: UDP-N-ac 36.0 2E+02 0.0043 28.4 8.5 99 73-176 50-160 (346)
183 PRK11706 TDP-4-oxo-6-deoxy-D-g 35.8 1.5E+02 0.0034 29.5 7.9 58 86-148 63-125 (375)
184 TIGR02316 propion_prpE propion 35.7 2.6E+02 0.0055 30.3 10.2 99 56-157 231-341 (628)
185 PLN02565 cysteine synthase 35.2 2.7E+02 0.0058 27.2 9.2 91 58-151 31-122 (322)
186 PRK06164 acyl-CoA synthetase; 34.8 3E+02 0.0064 28.9 10.4 96 56-156 180-283 (540)
187 PF09580 Spore_YhcN_YlaJ: Spor 34.4 1.1E+02 0.0024 26.6 5.9 51 453-509 77-127 (177)
188 TIGR02275 DHB_AMP_lig 2,3-dihy 33.6 3.4E+02 0.0074 28.4 10.6 96 56-156 182-287 (527)
189 PLN02574 4-coumarate--CoA liga 33.6 3.6E+02 0.0077 28.6 10.8 101 56-157 197-307 (560)
190 PLN02614 long-chain acyl-CoA s 32.2 2.6E+02 0.0057 30.5 9.6 98 56-156 222-329 (666)
191 COG2236 Predicted phosphoribos 32.1 75 0.0016 28.2 4.3 34 68-102 5-38 (192)
192 COG0318 CaiC Acyl-CoA syntheta 31.9 3.9E+02 0.0084 28.2 10.6 96 56-153 170-275 (534)
193 PRK08633 2-acyl-glycerophospho 31.7 2.7E+02 0.0058 32.7 10.2 97 56-156 781-886 (1146)
194 TIGR01139 cysK cysteine syntha 31.2 3.4E+02 0.0074 26.0 9.2 90 58-151 22-112 (298)
195 COG0043 UbiD 3-polyprenyl-4-hy 31.0 2.8E+02 0.0061 28.7 8.6 37 436-472 307-343 (477)
196 PLN02409 serine--glyoxylate am 30.3 3.8E+02 0.0083 27.0 9.8 76 73-149 38-114 (401)
197 TIGR01136 cysKM cysteine synth 30.0 4.3E+02 0.0094 25.3 9.7 91 58-151 23-113 (299)
198 PF00403 HMA: Heavy-metal-asso 30.0 1.8E+02 0.004 19.8 6.3 45 454-506 14-58 (62)
199 PRK07787 acyl-CoA synthetase; 29.8 4.1E+02 0.0089 27.2 10.3 95 56-156 127-230 (471)
200 PRK11761 cysM cysteine synthas 29.7 4.6E+02 0.0099 25.2 9.7 89 58-150 28-117 (296)
201 PRK10696 tRNA 2-thiocytidine b 29.2 4.1E+02 0.0089 24.8 9.1 78 71-148 4-93 (258)
202 PRK02261 methylaspartate mutas 29.0 1.8E+02 0.004 24.2 6.0 114 231-344 1-121 (137)
203 PRK07239 bifunctional uroporph 28.9 1.5E+02 0.0033 29.6 6.6 49 94-148 97-148 (381)
204 PRK09274 peptide synthase; Pro 28.7 3.7E+02 0.0081 28.3 9.9 98 191-289 20-121 (552)
205 cd02069 methionine_synthase_B1 28.4 4.4E+02 0.0095 23.9 8.8 91 232-326 87-186 (213)
206 cd03466 Nitrogenase_NifN_2 Nit 28.1 3.3E+02 0.0071 27.9 8.8 57 93-150 298-358 (429)
207 PRK10946 entE enterobactin syn 28.0 3.6E+02 0.0079 28.3 9.6 96 56-156 181-286 (536)
208 TIGR01734 D-ala-DACP-lig D-ala 27.8 6.1E+02 0.013 26.1 11.2 96 56-155 140-245 (502)
209 PLN03052 acetate--CoA ligase; 27.7 4.4E+02 0.0095 29.2 10.4 99 190-290 188-289 (728)
210 PLN02387 long-chain-fatty-acid 27.5 4.8E+02 0.01 28.7 10.7 102 211-317 106-210 (696)
211 PLN03013 cysteine synthase 27.4 5.2E+02 0.011 26.4 9.9 82 68-151 149-230 (429)
212 cd02070 corrinoid_protein_B12- 26.6 4.6E+02 0.01 23.4 11.5 109 215-327 64-183 (201)
213 PRK06155 crotonobetaine/carnit 26.4 4E+02 0.0087 28.0 9.6 85 211-296 46-133 (542)
214 PRK08279 long-chain-acyl-CoA s 26.3 5E+02 0.011 27.7 10.4 94 56-154 198-300 (600)
215 TIGR01796 CM_mono_aroH monofun 26.0 86 0.0019 25.1 3.2 56 70-125 13-71 (117)
216 PLN02736 long-chain acyl-CoA s 25.9 5.2E+02 0.011 28.0 10.6 100 211-315 78-180 (651)
217 PF00818 Ice_nucleation: Ice n 25.8 32 0.0007 16.6 0.5 9 339-347 1-9 (16)
218 PRK06839 acyl-CoA synthetase; 25.7 7.4E+02 0.016 25.4 11.5 96 56-156 148-252 (496)
219 PRK03584 acetoacetyl-CoA synth 25.7 2.8E+02 0.0062 30.1 8.5 67 90-156 300-369 (655)
220 PLN02861 long-chain-fatty-acid 25.6 3.8E+02 0.0083 29.2 9.5 98 56-156 219-326 (660)
221 PF05452 Clavanin: Clavanin; 25.6 28 0.00061 24.2 0.4 7 418-424 73-79 (80)
222 PRK09162 hypoxanthine-guanine 25.4 2E+02 0.0042 25.3 5.9 48 67-116 14-61 (181)
223 PRK13388 acyl-CoA synthetase; 25.2 6.2E+02 0.014 26.6 10.8 93 56-153 149-250 (540)
224 PRK07788 acyl-CoA synthetase; 24.9 2.6E+02 0.0056 29.5 7.9 83 69-156 226-309 (549)
225 KOG0025 Zn2+-binding dehydroge 24.9 2E+02 0.0043 27.4 5.8 69 86-154 152-221 (354)
226 PRK10252 entF enterobactin syn 24.9 4.4E+02 0.0096 31.4 10.5 96 56-155 597-702 (1296)
227 PLN03102 acyl-activating enzym 24.9 3.2E+02 0.0069 29.1 8.6 81 211-292 39-122 (579)
228 KOG1250 Threonine/serine dehyd 24.8 2.3E+02 0.005 28.3 6.4 55 99-153 117-171 (457)
229 PLN02556 cysteine synthase/L-3 24.7 4.3E+02 0.0093 26.4 8.7 60 91-150 106-165 (368)
230 TIGR00715 precor6x_red precorr 24.0 3.5E+02 0.0076 25.4 7.5 73 95-170 150-233 (256)
231 KOG3178 Hydroxyindole-O-methyl 23.9 2.2E+02 0.0047 27.9 6.1 77 446-525 202-280 (342)
232 PRK11070 ssDNA exonuclease Rec 23.8 5.1E+02 0.011 27.7 9.4 94 69-169 49-160 (575)
233 PRK00901 methylated-DNA--prote 23.7 1.7E+02 0.0036 25.1 4.8 22 67-88 88-115 (155)
234 PRK06087 short chain acyl-CoA 23.7 6.5E+02 0.014 26.4 10.6 90 56-150 186-284 (547)
235 TIGR03443 alpha_am_amid L-amin 23.7 5.3E+02 0.011 31.1 10.9 97 56-156 414-520 (1389)
236 COG1022 FAA1 Long-chain acyl-C 23.6 5.2E+02 0.011 27.9 9.5 98 55-157 189-294 (613)
237 cd06451 AGAT_like Alanine-glyo 23.2 3.2E+02 0.007 26.7 7.7 78 71-149 26-104 (356)
238 PRK11658 UDP-4-amino-4-deoxy-L 23.0 3.1E+02 0.0067 27.4 7.5 62 81-147 60-126 (379)
239 cd01561 CBS_like CBS_like: Thi 22.9 5.7E+02 0.012 24.3 9.1 59 93-152 51-109 (291)
240 TIGR01285 nifN nitrogenase mol 22.9 5.8E+02 0.013 26.1 9.5 76 94-170 310-401 (432)
241 PLN00011 cysteine synthase 22.8 5.6E+02 0.012 25.0 9.1 60 91-151 64-124 (323)
242 PF06543 Lac_bphage_repr: Lact 22.7 64 0.0014 21.0 1.6 22 310-331 22-43 (49)
243 PRK15407 lipopolysaccharide bi 22.7 3.2E+02 0.007 28.0 7.6 56 90-149 106-166 (438)
244 TIGR03208 cyc_hxne_CoA_lg cycl 22.1 6.7E+02 0.015 26.2 10.3 96 56-156 194-298 (538)
245 cd01449 TST_Repeat_2 Thiosulfa 22.0 1.7E+02 0.0036 23.2 4.5 40 80-120 64-103 (118)
246 PRK05851 long-chain-fatty-acid 22.0 6.7E+02 0.014 26.2 10.2 89 56-148 151-251 (525)
247 PF01060 DUF290: Transthyretin 21.9 2.6E+02 0.0055 20.6 5.0 18 426-443 33-50 (80)
248 COG0365 Acs Acyl-coenzyme A sy 21.9 2.8E+02 0.0061 29.2 7.0 102 56-160 170-282 (528)
249 PLN02654 acetate-CoA ligase 21.6 4.1E+02 0.0088 29.0 8.7 68 90-157 312-384 (666)
250 TIGR03588 PseC UDP-4-keto-6-de 21.6 3.9E+02 0.0084 26.6 8.0 64 80-147 55-126 (380)
251 cd01974 Nitrogenase_MoFe_beta 21.5 5.6E+02 0.012 26.2 9.1 47 93-140 301-351 (435)
252 PRK05852 acyl-CoA synthetase; 21.4 9.4E+02 0.02 25.1 11.8 86 68-157 194-282 (534)
253 PRK13383 acyl-CoA synthetase; 21.3 4.7E+02 0.01 27.2 8.9 84 211-295 60-146 (516)
254 PRK06814 acylglycerophosphoeth 21.0 6.2E+02 0.013 29.7 10.6 97 56-156 792-897 (1140)
255 PRK06381 threonine synthase; V 21.0 2.8E+02 0.0061 26.9 6.6 88 58-152 32-119 (319)
256 cd01519 RHOD_HSP67B2 Member of 20.8 2.2E+02 0.0047 21.9 4.8 52 69-121 37-92 (106)
257 PRK12434 tRNA pseudouridine sy 20.7 3.8E+02 0.0082 24.9 7.0 63 454-520 30-96 (245)
258 PRK10717 cysteine synthase A; 20.7 5.8E+02 0.013 24.9 8.8 90 58-150 29-118 (330)
259 TIGR01138 cysM cysteine syntha 20.5 7.1E+02 0.015 23.7 9.1 90 58-150 24-113 (290)
260 PTZ00342 acyl-CoA synthetase; 20.4 7.1E+02 0.015 27.7 10.2 118 190-316 74-208 (746)
261 PRK06060 acyl-CoA synthetase; 20.1 6E+02 0.013 27.9 9.7 98 56-156 144-250 (705)
262 PRK08008 caiC putative crotono 20.1 9.7E+02 0.021 24.8 11.0 99 190-293 20-121 (517)
263 TIGR02372 4_coum_CoA_lig 4-cou 20.0 8.9E+02 0.019 24.3 10.3 82 68-154 113-196 (386)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-83 Score=647.55 Aligned_cols=483 Identities=39% Similarity=0.635 Sum_probs=424.6
Q ss_pred cEEEECC-CCceecHHHHHHHHHHHHHHhHHhcC--CCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHH
Q 008895 59 VALINSV-TGLRVSFSEFTRRTNSLASYLQNVTR--LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (549)
Q Consensus 59 ~a~~~~~-~~~~~Ty~el~~~a~~~A~~L~~~~g--~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~ 135 (549)
++++... .|+.+||.|++.++.++|.+|.+ +| +++||+|+++++|+++++.+++||+.+|+++.+++|.++..++.
T Consensus 34 ~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~-~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~ 112 (537)
T KOG1176|consen 34 TSLVYQDSDGRELTYSELHDRCRRLASALSE-LGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIA 112 (537)
T ss_pred ceEEEecCCCcEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHH
Confidence 5665542 26999999999999999999997 65 89999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCccHHHHhcC----CCeEEEecCC----chhhhhcccC------CCcccc-ccccCCCCEEEEEcc
Q 008895 136 RQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDSP----EFDSMTMSWN------SKHELD-RAKVCQSDVAAIMYS 200 (549)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~------~~~~~~-~~~~~~~~~a~i~~T 200 (549)
+.++.+++++++++....+++... ...++.+... ...+...... ...... ......++++.++||
T Consensus 113 ~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~il~S 192 (537)
T KOG1176|consen 113 KQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRPVSEDDTAAILYS 192 (537)
T ss_pred HHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcccccCCCCCeEEEecC
Confidence 999999999999999988877532 2444444422 1111111000 000000 234456899999999
Q ss_pred CCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHH-HhhhccEEEEecCcCHHHHHHHHHH
Q 008895 201 SGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFR-AAALMETAVVMQRFDLKMMLKAVEE 279 (549)
Q Consensus 201 SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~-~l~~g~~~~~~~~~~~~~~~~~l~~ 279 (549)
|||||.||||.+||+++..+........ .....++.++.+|++|.+|+...+. .+..|.+++....++++.+++.+++
T Consensus 193 SGTTg~PKgV~lsHr~~~~~~~~~~~~~-~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~k 271 (537)
T KOG1176|consen 193 SGTTGLPKGVVLSHRNLIANTLSIKIGW-ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEK 271 (537)
T ss_pred CCCCCCCceEEEecHHHHHHHHHhhhcc-cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHH
Confidence 9999999999999999998877655555 3566899999999999999977776 4555555555667899999999999
Q ss_pred hceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCC
Q 008895 280 FRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECR 359 (549)
Q Consensus 280 ~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~ 359 (549)
|++|+++++|+++..|++.+.....+++++|.+.+||+++++++.+++++.+|...+.+.||+||+++.++.+...++ .
T Consensus 272 ykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e-~ 350 (537)
T KOG1176|consen 272 YKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE-R 350 (537)
T ss_pred hCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc-C
Confidence 999999999999999999987777889999999999999999999999999987999999999999977776655555 6
Q ss_pred CCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcc
Q 008895 360 RWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDR 439 (549)
Q Consensus 360 ~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR 439 (549)
+.+++|+++++++..+.+ ++++.+++++.||||++|+.++.||+++|+.|++.|.++|||+|||+|+.|+||++|+.+|
T Consensus 351 k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR 429 (537)
T KOG1176|consen 351 KPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDR 429 (537)
T ss_pred cccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecc
Confidence 789999999998888888 9999999999999999999999999999999999998889999999999999999999999
Q ss_pred cCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEE
Q 008895 440 LKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAF 519 (549)
Q Consensus 440 ~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~ 519 (549)
++|+||.+|++|+|.|||++|..||.|.||+||+++|+..|+.++|||+.+++...++++|++++++++++|+.|+.++|
T Consensus 430 ~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~y~~~~~V~F 509 (537)
T KOG1176|consen 430 SKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPAYKLPGGVVF 509 (537)
T ss_pred hhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCChhhccCeEEE
Confidence 99999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred eCccCCCCCCcccHHHHHcccCcCCC
Q 008895 520 INAIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 520 v~~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
+++||+|++|||.|+.||+++.....
T Consensus 510 vd~lPKs~~GKi~R~~lr~~~~~~~~ 535 (537)
T KOG1176|consen 510 VDELPKTPNGKILRRKLRDIAKKLGS 535 (537)
T ss_pred eccCCCCCcchHHHHHHHHHHHhccc
Confidence 99999999999999999999987543
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=6.2e-79 Score=571.46 Aligned_cols=498 Identities=28% Similarity=0.376 Sum_probs=440.8
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
-|+++.+...+++. ||+.|.+....+.++||+|+...++++|++|.. +|+++||||++..+|+.+|+..+|||.+
T Consensus 50 ~Tigq~l~~~t~~v----~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-lGL~kGDrVgvwgpN~~~w~l~~lA~A~ 124 (596)
T KOG1177|consen 50 ETIGQLLETTTERV----PDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-LGLKKGDRVGVWGPNSYEWVLCQLACAR 124 (596)
T ss_pred ccHHHHHHHHhhcc----CcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-hcCCCCCEEEEecCChHHHHHHHHHHHH
Confidence 68999999999999 999999988788899999999999999999999 9999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHH-----HHhc------------C------CCe-EEEecCC----
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-----KLAK------------L------KHR-TILIDSP---- 169 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~------------~------~~~-~~~~~~~---- 169 (549)
+|.+.++++|++...+++..|++.+++++|..+.... .+.+ + ... ++..+..
T Consensus 125 AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~ 204 (596)
T KOG1177|consen 125 AGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLP 204 (596)
T ss_pred hceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCC
Confidence 9999999999999999999999999999998765322 1111 0 111 2322311
Q ss_pred ---chhhhhcccCCCc----cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecC
Q 008895 170 ---EFDSMTMSWNSKH----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP 242 (549)
Q Consensus 170 ---~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~p 242 (549)
.+.++........ ........|++++.|.|||||||.|||+.+||.+++++.......+ +..+.+++++..|
T Consensus 205 Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~-g~~e~~~i~~~~P 283 (596)
T KOG1177|consen 205 GAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA-GYNEKHRICIPNP 283 (596)
T ss_pred CceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh-CcCcceEEEecCc
Confidence 1333332221110 1122345779999999999999999999999999999998888888 5777889999999
Q ss_pred hhhHHHH-HHHHHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCC
Q 008895 243 YFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (549)
Q Consensus 243 l~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~ 320 (549)
++|.+|. ...+.++..|++++++. .|++...++.|.++++|.++++|+++..+++.+.....+++++|..+.||++++
T Consensus 284 l~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s 363 (596)
T KOG1177|consen 284 LYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVS 363 (596)
T ss_pred hHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCC
Confidence 9999996 88899999999999965 599999999999999999999999999999999888999999999999999999
Q ss_pred HHHHHHHHHhCCCCcEEcccCccccccceeccc-CcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCc
Q 008895 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV-GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTI 399 (549)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~ 399 (549)
+++.+.+.....=..+...||+||+++..+... .+.......++|...++.+..++| +.|..++.|..|||+++|.+.
T Consensus 364 ~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~t 442 (596)
T KOG1177|consen 364 PELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYST 442 (596)
T ss_pred HHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEechh
Confidence 999999999774345788999999998766543 333344557999999999999999 899999999999999999999
Q ss_pred ccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCC
Q 008895 400 MKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEA 479 (549)
Q Consensus 400 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~ 479 (549)
+.|||++++.|.++...|.||+|||+|.+|++|+++++||.+|+|+.+|++|+|.|||+.|.+||.|.++.||+++|+..
T Consensus 443 Ml~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~ 522 (596)
T KOG1177|consen 443 MLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGVPDERL 522 (596)
T ss_pred heeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEEeCCCCC--CCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 480 GQMPMAFVVRQPHSS--LNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 480 ~~~~~~~v~~~~~~~--~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
++.++|+|-++.+.. ..+++|+++|+.++..|++|++|++++++|+|.+|||+|.++|++.+.
T Consensus 523 GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k~ 587 (596)
T KOG1177|consen 523 GEEVCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSKG 587 (596)
T ss_pred cceEEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHHHHHHHh
Confidence 999999999887654 588999999999999999999999999999999999999999999873
No 3
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.2e-78 Score=608.84 Aligned_cols=492 Identities=27% Similarity=0.406 Sum_probs=417.8
Q ss_pred CCHHHH-HhhcccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHH
Q 008895 38 ISAVDY-VSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (549)
Q Consensus 38 ~~~~~~-~~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~l 113 (549)
+|+... +....+... +++.|++...+ .+++||+||.+.++++|+.|++..|+ +||||++++|+.+++++++|
T Consensus 8 lN~~~n~~dr~~~~~~---~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~L 83 (528)
T COG0365 8 LNLALNALDRHLEADR---PDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALL 83 (528)
T ss_pred eechhhhhhhhhhccC---CCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHH
Confidence 566554 334443331 67888876522 27899999999999999999874678 99999999999999999999
Q ss_pred HHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCC---------eEEEecC--CchhhhhcccCCCc
Q 008895 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKH---------RTILIDS--PEFDSMTMSWNSKH 182 (549)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~~~ 182 (549)
||+++|++.+|+.+.++++.+..++++++++++|+++....+...... .++++.. ..|.+.......
T Consensus 84 A~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~~-- 161 (528)
T COG0365 84 ATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKASE-- 161 (528)
T ss_pred HHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhccCC--
Confidence 999999999999999999999999999999999998876654332111 1233322 233333322221
Q ss_pred cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccE
Q 008895 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (549)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~ 261 (549)
.........+++++++|||||||+||+|+++|..++..............++|++++..+..|++|. +.+++++..|++
T Consensus 162 ~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat 241 (528)
T COG0365 162 KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGAT 241 (528)
T ss_pred CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCe
Confidence 2223336889999999999999999999999998887776666655456699999999999999999 448999999999
Q ss_pred EEEecC--c-CHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEc
Q 008895 262 AVVMQR--F-DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (549)
Q Consensus 262 ~~~~~~--~-~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~ 338 (549)
.++... + +++.+++.|+++++|.++.+|+.++.|.+.......++++||.+.+.|||++++.++++.+.+ ++.+.+
T Consensus 242 ~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d 320 (528)
T COG0365 242 TVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILD 320 (528)
T ss_pred EEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEec
Confidence 998753 3 489999999999999999999999999998766667899999999999999999999999999 699999
Q ss_pred ccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecC--CcccccCCCccccccccCC
Q 008895 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP--TIMKGYVGEPEVTSATLLP 416 (549)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--~~~~gy~~~~~~~~~~~~~ 416 (549)
.||+||+|.+...... ..+.++.|.|+||+++.++|++ +++++.|+ |+|+++.+ ++++|||++++.+.+++..
T Consensus 321 ~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~ 395 (528)
T COG0365 321 IYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFG 395 (528)
T ss_pred cccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhh
Confidence 9999999954443222 4455666999999999999965 99999999 99999986 9999999999999988864
Q ss_pred CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCC
Q 008895 417 DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLN 496 (549)
Q Consensus 417 ~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~ 496 (549)
. ||.|||.+++|+||++++.||.||+||+.|++|.+.|||++|.+||.|.||+||+.+|+..++.+++||+++++...+
T Consensus 396 ~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~ 474 (528)
T COG0365 396 R-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPN 474 (528)
T ss_pred c-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChH
Confidence 4 999999999999999999999999999999999999999999999999999999999999999999999999876544
Q ss_pred --HHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 497 --EAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 497 --~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
.++|.+++++.+.+++.|+.|.++++||+|.||||.|+.||+.+.+
T Consensus 475 ~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 475 ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 3577778888888899999999999999999999999999999874
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-77 Score=623.87 Aligned_cols=499 Identities=34% Similarity=0.528 Sum_probs=431.2
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
..++.+.+...++.+ |+++|+++.....++||+||.++++++|..|++ .|+++||+|+|+++|++++++++|||+
T Consensus 10 ~~~~~~~l~~~a~~~----~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~-~~v~~gdrVail~~N~~e~~~~~~a~~ 84 (534)
T COG0318 10 ELTLASLLERAARRN----PDRPALIFLGRGGRLTYRELDRRANRLAAALQA-LGVKPGDRVAILLPNSPEFLIAFLAAL 84 (534)
T ss_pred cccHHHHHHHHHHhC----CCceEEEEcCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 379999999999999 999999987332349999999999999999999 889999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC---C--Ce-EEEecCC------chhhhhcccCCCccc
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---K--HR-TILIDSP------EFDSMTMSWNSKHEL 184 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~--~~-~~~~~~~------~~~~~~~~~~~~~~~ 184 (549)
++|++++|++|.+...++.++++.+++++++++.......... . .. ....... .+.......... ..
T Consensus 85 ~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 163 (534)
T COG0318 85 RAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGP-DA 163 (534)
T ss_pred hcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCc-cc
Confidence 9999999999999999999999999999999998743333321 1 11 1111111 223332211111 11
Q ss_pred cccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCC-CCCCcEEEEecChhhHHHHHHHH-HHhhhccEE
Q 008895 185 DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGLFFCF-RAAALMETA 262 (549)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~pl~~~~g~~~~~-~~l~~g~~~ 262 (549)
......++++++++|||||||.||+|++||+++..+.......+.. ....|++++++|++|.+|+...+ ..+..|+++
T Consensus 164 ~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~ 243 (534)
T COG0318 164 DARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTL 243 (534)
T ss_pred ccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEE
Confidence 1112568999999999999999999999999999988887777733 68889999999999999996554 458889999
Q ss_pred EEec--CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCC-ceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 263 VVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSS-LETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 263 ~~~~--~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~-lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
++.. .+++..++..+.++++|+++++|+++..++........++.+ +|.++.||+++++++.+++.+.|+...+.+.
T Consensus 244 v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~ 323 (534)
T COG0318 244 VLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEG 323 (534)
T ss_pred EeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEe
Confidence 9987 599999999999999999999999999999988776666665 9999999999999999999999966789999
Q ss_pred cCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCe
Q 008895 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGW 419 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 419 (549)
||+||++..++...........+++|+|+|+++++|+|+++++++| |++|||+|+||+++.|||++|+.|...|..+||
T Consensus 324 YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW 402 (534)
T COG0318 324 YGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGW 402 (534)
T ss_pred ecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCe
Confidence 9999999776664433301356777999999999999987776777 999999999999999999999999998865699
Q ss_pred eecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCC--CCCCH
Q 008895 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPH--SSLNE 497 (549)
Q Consensus 420 ~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~--~~~~~ 497 (549)
|+|||+|++|++|++++.||.+|+|+.+|++|+|.+||.++.+||.|.+++|++++++.+++.++++++.+++ ...+.
T Consensus 403 ~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~ 482 (534)
T COG0318 403 LRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAELTA 482 (534)
T ss_pred eeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999876 34588
Q ss_pred HHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 498 AEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 498 ~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
++|.++++++++.+++|+.++++++||+|++||++|+.|++.+..
T Consensus 483 ~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 483 EELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred HHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998876
No 5
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.4e-75 Score=619.25 Aligned_cols=531 Identities=43% Similarity=0.690 Sum_probs=450.5
Q ss_pred CCCCCCCCCCCCCCceeccCCCCCCCCCCCCCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHH
Q 008895 6 PQLFDTKSGFNSATKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASY 85 (549)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~ 85 (549)
.+-.++.+.+++..++|.+..++.++|. ++.+++.+.+++. +.+ |+++|+++...+.++||.||.++++++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~~----~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~ 82 (560)
T PLN02574 9 TSHNNPPFWYSPETGIYSSKHPPVPLPS-DPNLDAVSFIFSH-HNH----NGDTALIDSSTGFSISYSELQPLVKSMAAG 82 (560)
T ss_pred CCCCCCccccCcCCeeecCCCCCCCCCC-CCCCCHHHHHhcC-ccc----CCCCEEEECCCCCcccHHHHHHHHHHHHHH
Confidence 3556778888888899998876555544 2346777777766 566 899999987556689999999999999999
Q ss_pred hHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEE
Q 008895 86 LQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTIL 165 (549)
Q Consensus 86 L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 165 (549)
|+++.|+++||+|+++++|+.++++++|||+++|++++|++|..+.+++.++++.+++++++++.+....+......++.
T Consensus 83 L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (560)
T PLN02574 83 LYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIG 162 (560)
T ss_pred HHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEe
Confidence 99647999999999999999999999999999999999999999999999999999999999998877766554444443
Q ss_pred ecC-----------CchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhc----cCCC
Q 008895 166 IDS-----------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA----SSPK 230 (549)
Q Consensus 166 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~ 230 (549)
++. ..+..+...... ........++++++++|||||||.||+|+++|+++.+....... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~ 240 (560)
T PLN02574 163 VPENYDFDSKRIEFPKFYELIKEDFD--FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEY 240 (560)
T ss_pred cCcccccccCccCcccHHHHhhcCCc--ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhcccccccc
Confidence 321 112222211110 11122345688999999999999999999999999887765433 1112
Q ss_pred CCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC-CCCCCCC
Q 008895 231 RVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST-DGYDLSS 308 (549)
Q Consensus 231 ~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~-~~~~l~~ 308 (549)
....++++..+|++|.+|+ ..++.++..|+++++.+.+++..+++.|+++++|+++++|+++..+++.... ....+++
T Consensus 241 ~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 320 (560)
T PLN02574 241 PGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKS 320 (560)
T ss_pred CCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCcccc
Confidence 2356788999999999998 4456777889999999889999999999999999999999999999887543 3456889
Q ss_pred ceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCC
Q 008895 309 LETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK 388 (549)
Q Consensus 309 lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~ 388 (549)
+|.+++||+++++++++++.+.++++.+++.||+||++...............+++|.++++++++|+|++++++++.|+
T Consensus 321 lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~ 400 (560)
T PLN02574 321 LKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGN 400 (560)
T ss_pred ceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCC
Confidence 99999999999999999999999889999999999998655432222333456799999999999999988999999999
Q ss_pred cceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcce
Q 008895 389 EGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVAD 468 (549)
Q Consensus 389 ~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~ 468 (549)
.|||+|+|+.++.||+++++.+...|..+|||+|||+|+++++|++++.||+||+||++|++|++.+||.+|.+||+|.+
T Consensus 401 ~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~ 480 (560)
T PLN02574 401 CGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIID 480 (560)
T ss_pred CeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcce
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 469 AAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 469 ~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
++|++.+++..++.++++|+.+++...+.+++.++++++|++++.|+.++++++||+|++||++|+.|++++....
T Consensus 481 ~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~ 556 (560)
T PLN02574 481 AAVTAVPDKECGEIPVAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSV 556 (560)
T ss_pred EEEEccccCCCCcceEEEEEeCCCCCCCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhcc
Confidence 9999999888888999999988766678899999999999999999999999999999999999999999986544
No 6
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=6.1e-73 Score=607.55 Aligned_cols=498 Identities=21% Similarity=0.289 Sum_probs=410.9
Q ss_pred CCCCHHHHHh-hccc-CCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH
Q 008895 36 APISAVDYVS-SLRA-TLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (549)
Q Consensus 36 ~~~~~~~~~~-~~~~-~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~ 109 (549)
..+|+...+. ++++ .+ |+++|++... .++++||+||.++++++|++|++ +|+++||+|+++++|+++++
T Consensus 85 ~~~N~~~~~l~~~~~~~~----~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~pn~~e~v 159 (666)
T PLN02654 85 GKTNICYNCLDRNVEAGN----GDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-VGVKKGDAVVIYLPMLMELP 159 (666)
T ss_pred CEeeHHHHHHHHhhccCC----CCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 3477755444 4444 46 9999998631 23689999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHH---------H----hc-----CCCe-EEEecCC-
Q 008895 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHK---------L----AK-----LKHR-TILIDSP- 169 (549)
Q Consensus 110 v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~----~~-----~~~~-~~~~~~~- 169 (549)
+++|||+++|++++|+++.++.+++..++++++++++|+++..... + .. .... ++..+..
T Consensus 160 ~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (666)
T PLN02654 160 IAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQL 239 (666)
T ss_pred HHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccc
Confidence 9999999999999999999999999999999999999998764221 1 00 0001 1111110
Q ss_pred ---------------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHH-hhccCCCCCC
Q 008895 170 ---------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS-SFASSPKRVS 233 (549)
Q Consensus 170 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~ 233 (549)
.|+++.... ..........++++++|+|||||||.||||+++|.+++..... ....+ ...+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-~~~~ 316 (666)
T PLN02654 240 AMKREDTKWQEGRDVWWQDVVPNY--PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-DYKP 316 (666)
T ss_pred cccccccccccCCcccHHHHhhcC--CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-CCCC
Confidence 011111100 0001112246789999999999999999999999998654433 33333 5678
Q ss_pred CcEEEEecChhhHHHH-HHHHHHhhhccEEEEecC----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC--CCCCCC
Q 008895 234 PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDL 306 (549)
Q Consensus 234 ~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l 306 (549)
+|++++.+|+.|++|. +.++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|.+... ....++
T Consensus 317 ~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l 396 (666)
T PLN02654 317 TDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSR 396 (666)
T ss_pred CcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCCh
Confidence 8999999999999987 557889999999999863 578999999999999999999999999988653 234568
Q ss_pred CCceEEEEecCCCCHHHHHHHHHhCCC--CcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcC
Q 008895 307 SSLETVACGAAPLGKDTIMAFASKFPK--VVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSL 384 (549)
Q Consensus 307 ~~lr~v~~~Ge~l~~~~~~~~~~~~~~--~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~ 384 (549)
++||.++++|+++++++++++.+.++. +.+.+.||+||+++..+...........+++|+|++|++++|+| ++++++
T Consensus 397 ~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~ 475 (666)
T PLN02654 397 KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEI 475 (666)
T ss_pred hheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCC
Confidence 899999999999999999999999853 68999999999987655432212234668999999999999999 678889
Q ss_pred CCCCcceEEEec--CCcccccCCCccccccccCC--CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHH
Q 008895 385 PPGKEGELSIRG--PTIMKGYVGEPEVTSATLLP--DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLL 460 (549)
Q Consensus 385 ~~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l 460 (549)
+.++.|||+|++ |+++.|||++++.+...+.. +|||+|||+|++|+||+++++||+||+||++|++|+|.|||++|
T Consensus 476 ~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l 555 (666)
T PLN02654 476 EGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESAL 555 (666)
T ss_pred CCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHH
Confidence 888899999999 78999999999887766532 68999999999999999999999999999999999999999999
Q ss_pred HcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHH
Q 008895 461 LSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNE---AEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELR 537 (549)
Q Consensus 461 ~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~ 537 (549)
.+||+|.+++|++++++..++.+++||+++++...+. ++|+++++++|++++.|+.|+++++||+|++||++|+.|+
T Consensus 556 ~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~ 635 (666)
T PLN02654 556 VSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 635 (666)
T ss_pred HhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHH
Confidence 9999999999999999888999999999987654443 4788999999999999999999999999999999999999
Q ss_pred cccCc
Q 008895 538 KVAVP 542 (549)
Q Consensus 538 ~~~~~ 542 (549)
+++..
T Consensus 636 ~~~~~ 640 (666)
T PLN02654 636 KIASR 640 (666)
T ss_pred HHHcC
Confidence 99865
No 7
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.4e-73 Score=598.60 Aligned_cols=482 Identities=27% Similarity=0.379 Sum_probs=419.7
Q ss_pred CHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHc
Q 008895 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (549)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~ 118 (549)
++.+++.+.++++ |+++|+++. ++++||+||.++++++|++|.+ .|+++|++|+++++|++++++++|||+++
T Consensus 50 ~~~~~~~~~a~~~----pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la~~~~ 122 (549)
T PRK07788 50 PFAGLVAHAARRA----PDRAALIDE--RGTLTYAELDEQSNALARGLLA-LGVRAGDGVAVLARNHRGFVLALYAAGKV 122 (549)
T ss_pred hHHHHHHHHHHHC----CCceEEEEC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 8899999999999 999999987 7899999999999999999999 89999999999999999999999999999
Q ss_pred CCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCeEEEecC----------CchhhhhcccCCCcc
Q 008895 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRTILIDS----------PEFDSMTMSWNSKHE 183 (549)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~~~~----------~~~~~~~~~~~~~~~ 183 (549)
|++++|+++.++.+++.+++++++++++|++++....+... ....+.... ..++++.....
T Consensus 123 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 198 (549)
T PRK07788 123 GARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSS---- 198 (549)
T ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCC----
Confidence 99999999999999999999999999999998876655432 112221110 12223222111
Q ss_pred ccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEE
Q 008895 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAV 263 (549)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~ 263 (549)
........++.++++|||||||.||+|.++|+++...+......+ ....+++++..+|++|.+|+...+.++..|++++
T Consensus 199 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v 277 (549)
T PRK07788 199 TAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-PFRAGETTLLPAPMFHATGWAHLTLAMALGSTVV 277 (549)
T ss_pred CCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-CCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEE
Confidence 111122346789999999999999999999999998877766666 4677889999999999999977788999999999
Q ss_pred EecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccC
Q 008895 264 VMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (549)
Q Consensus 264 ~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG 341 (549)
+...+++..+++.++++++|+++++|+++..+++.... ....++++|.+++||+++++++.+++.+.+ +..+++.||
T Consensus 278 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG 356 (549)
T PRK07788 278 LRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYG 356 (549)
T ss_pred ECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccC
Confidence 98889999999999999999999999999999887654 455688999999999999999999999998 678999999
Q ss_pred ccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeee
Q 008895 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMR 421 (549)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~ 421 (549)
+||++....... .......+++|+|+++++++|+| +++++++.|+.|||+|+|++++.||+++++. . . .+|||+
T Consensus 357 ~TE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~-~~g~~~ 430 (549)
T PRK07788 357 STEVAFATIATP-EDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I-IDGLLS 430 (549)
T ss_pred cchhchhhccCh-hhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc--c-c-cCCcee
Confidence 999986554322 12223457899999999999999 6788999999999999999999999998765 1 2 479999
Q ss_pred cCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHH
Q 008895 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIM 501 (549)
Q Consensus 422 TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~ 501 (549)
|||+|+++++|++++.||+||+||++|++|+|.+||++|.++|+|.+++|++.+++..++.++++|+.+++...+.++++
T Consensus 431 TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~ 510 (549)
T PRK07788 431 SGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIK 510 (549)
T ss_pred cCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888999999998877778889999
Q ss_pred HHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcc
Q 008895 502 EFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 539 (549)
Q Consensus 502 ~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~ 539 (549)
++++++|+.|++|..|+++++||+|++||++|++|+++
T Consensus 511 ~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 511 DYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred HHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99999999999999999999999999999999999875
No 8
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=5.2e-72 Score=590.05 Aligned_cols=513 Identities=41% Similarity=0.640 Sum_probs=440.6
Q ss_pred ceeccCCCCCCCCCCCCCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEE
Q 008895 20 KTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAF 99 (549)
Q Consensus 20 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~ 99 (549)
..|++.+....+|. ..|+.+++.++++++ |+++|+++..+++++||.||.++++++|++|.+ .|+++||+|+
T Consensus 8 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~----~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~-~g~~~gd~V~ 79 (537)
T PLN02246 8 FIFRSKLPDIYIPN---HLPLHDYCFERLSEF----SDRPCLIDGATGRVYTYADVELLSRRVAAGLHK-LGIRQGDVVM 79 (537)
T ss_pred eEecCCCCCCCCCC---CCcHHHHHHHHHHhC----CCCeEEEecCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEE
Confidence 34555555544444 379999999999999 999999986556899999999999999999998 8999999999
Q ss_pred EEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCeEEEecCCc-----
Q 008895 100 VLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDSPE----- 170 (549)
Q Consensus 100 i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~~----- 170 (549)
++++|+.++++++|||+++|++++|++|.++.+++..+++.++++++|+++.....+... ...++.++...
T Consensus 80 i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 159 (537)
T PLN02246 80 LLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLH 159 (537)
T ss_pred EECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCcee
Confidence 999999999999999999999999999999999999999999999999998776655432 23444444211
Q ss_pred hhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhcc---CCCCCCCcEEEEecChhhHH
Q 008895 171 FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS---SPKRVSPAVMLFTMPYFHIY 247 (549)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~ 247 (549)
+.+...... .........++++++++|||||||.||+|+++|+++.......... ......+|+++..+|++|.+
T Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 237 (537)
T PLN02246 160 FSELTQADE--NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIY 237 (537)
T ss_pred HHHHhcCCC--CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHH
Confidence 222221111 0111223457899999999999999999999999998877654332 12467789999999999999
Q ss_pred HH-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHH
Q 008895 248 GL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMA 326 (549)
Q Consensus 248 g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~ 326 (549)
++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..|++........++++|.+++||+++++++.+.
T Consensus 238 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~ 317 (537)
T PLN02246 238 SLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDA 317 (537)
T ss_pred HHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHH
Confidence 98 45677889999999999999999999999999999999999999998877655667889999999999999999999
Q ss_pred HHHhCCCCcEEcccCccccccceecccC---cCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCccccc
Q 008895 327 FASKFPKVVLVQAYGLTESTAGVFRTVG---PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGY 403 (549)
Q Consensus 327 ~~~~~~~~~l~~~yG~tE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy 403 (549)
+++.+++..+.+.||+||++.++..... .......+++|+|+++++++|+|++++++++.|+.|||+++|+.++.||
T Consensus 318 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY 397 (537)
T PLN02246 318 FRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGY 397 (537)
T ss_pred HHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccc
Confidence 9999988899999999999875543211 1112345789999999999999988899999999999999999999999
Q ss_pred CCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCcee
Q 008895 404 VGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMP 483 (549)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~ 483 (549)
+++++.+...+..++||+|||+|+++++|++++.||.||++|.+|++|+|.+||++|.++|+|.+++|++.++...++.+
T Consensus 398 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~ 477 (537)
T PLN02246 398 LNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVP 477 (537)
T ss_pred cCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCcee
Confidence 99999999888889999999999999999999999999999999999999999999999999999999999888888899
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 484 MAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 484 ~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+++++..++...+.++++++++++|+.++.|..++++++||+|++||++|++|++++.+
T Consensus 478 ~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 478 VAFVVRSNGSEITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 99999887666778999999999999999999999999999999999999999998764
No 9
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.4e-72 Score=596.85 Aligned_cols=495 Identities=25% Similarity=0.323 Sum_probs=415.2
Q ss_pred CCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHH
Q 008895 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (549)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~ 115 (549)
.+.++.++|.+.++++ |+++|++++ ++++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||
T Consensus 5 ~~~~~~~~~~~~~~~~----p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~Gv~~gd~V~v~~~n~~~~~~~~la~ 77 (563)
T PLN02860 5 SQAHICQCLTRLATLR----GNAVVTISG--NRRRTGHEFVDGVLSLAAGLLR-LGLRNGDVVAIAALNSDLYLEWLLAV 77 (563)
T ss_pred hhhHHHHHHHHHHHhc----CCceEEecC--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3479999999999999 999999876 7899999999999999999999 89999999999999999999999999
Q ss_pred HHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhc-----C-CCe-EEEecCCc------hhhhhcccCC--
Q 008895 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK-----L-KHR-TILIDSPE------FDSMTMSWNS-- 180 (549)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-----~-~~~-~~~~~~~~------~~~~~~~~~~-- 180 (549)
+++|++++|+++.++.+++.++++++++++++++......... . ... .+..+... +.+.......
T Consensus 78 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 157 (563)
T PLN02860 78 ACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQ 157 (563)
T ss_pred hhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhcc
Confidence 9999999999999999999999999999999998754221111 1 111 12222111 1111110000
Q ss_pred ---CccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhh
Q 008895 181 ---KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAA 257 (549)
Q Consensus 181 ---~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~ 257 (549)
..........++++++++|||||||.||+|.++|++++.+.......+ ...++|+++..+|++|.+++...+.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~l~ 236 (563)
T PLN02860 158 RALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-GYGEDDVYLHTAPLCHIGGLSSALAMLM 236 (563)
T ss_pred CccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-CCCCCCEEEEecCchhhccHHHHHHHHH
Confidence 000111223568999999999999999999999999987766655555 4677899999999999999988889999
Q ss_pred hccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCc
Q 008895 258 LMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVV 335 (549)
Q Consensus 258 ~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~ 335 (549)
.|+++++.+.+++..+++.|+++++|+++++|+++..|++.... ....++++|.+++||+++++++.+.+.+.|+++.
T Consensus 237 ~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~ 316 (563)
T PLN02860 237 VGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAK 316 (563)
T ss_pred cCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCc
Confidence 99999999889999999999999999999999999999876432 2245789999999999999999999999998899
Q ss_pred EEcccCccccccceecccCcC---------------------CCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEE
Q 008895 336 LVQAYGLTESTAGVFRTVGPD---------------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSI 394 (549)
Q Consensus 336 l~~~yG~tE~~~~~~~~~~~~---------------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v 394 (549)
+++.||+||++..+....... ......++|+|+++++++|++++ +|+.|||+|
T Consensus 317 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v 390 (563)
T PLN02860 317 LFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILT 390 (563)
T ss_pred eecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEE
Confidence 999999999976544321111 01112368999999999999844 678999999
Q ss_pred ecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEee
Q 008895 395 RGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPY 474 (549)
Q Consensus 395 ~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~ 474 (549)
+|+.++.||+++++.+...+..+|||+|||+|++|++|++++.||+||+||.+|++|+|.+||++|.+||+|.+++|++.
T Consensus 391 ~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~ 470 (563)
T PLN02860 391 RGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGV 470 (563)
T ss_pred ecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEEE
Confidence 99999999999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeEEEEEeCCCC--------------CCCHHHHHHHHHh-cCCCCCcccEEEEe-CccCCCCCCcccHHHHHc
Q 008895 475 PDEEAGQMPMAFVVRQPHS--------------SLNEAEIMEFVAR-QVSPYKKIRRVAFI-NAIPKSAAGKILRMELRK 538 (549)
Q Consensus 475 ~~~~~~~~~~~~v~~~~~~--------------~~~~~~i~~~l~~-~l~~~~~p~~i~~v-~~lP~t~~GKv~r~~l~~ 538 (549)
++...++.++++|++.++. ..+.+++.+++++ +|++|++|+.++++ ++||+|++|||+|++|++
T Consensus 471 ~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~ 550 (563)
T PLN02860 471 PDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRR 550 (563)
T ss_pred ecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHH
Confidence 9988889999999987541 3456789999987 59999999988765 789999999999999999
Q ss_pred ccCcCC
Q 008895 539 VAVPSG 544 (549)
Q Consensus 539 ~~~~~~ 544 (549)
++.+.-
T Consensus 551 ~~~~~~ 556 (563)
T PLN02860 551 EVLSHL 556 (563)
T ss_pred HHHHHH
Confidence 986543
No 10
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.3e-72 Score=600.51 Aligned_cols=501 Identities=21% Similarity=0.282 Sum_probs=410.6
Q ss_pred CCCHH-HHHhhcccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHH
Q 008895 37 PISAV-DYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (549)
Q Consensus 37 ~~~~~-~~~~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~ 111 (549)
.+|+. +.+.++++++ |+++|+++. ...+++||+||.++++++|++|++ +|+++||+|+++++|+++++++
T Consensus 50 ~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~Gd~V~i~~~n~~e~v~~ 124 (628)
T TIGR02316 50 RTNLCHNALDRHLDER----GEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-LGVGRGDRVLIYMPMIAEAVFA 124 (628)
T ss_pred EeeHHHHHHHHHhCcC----CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 36665 4555666677 999999863 124689999999999999999998 8999999999999999999999
Q ss_pred HHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH---------HHH----hc---CCCeEEEecCC------
Q 008895 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AK---LKHRTILIDSP------ 169 (549)
Q Consensus 112 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~----~~---~~~~~~~~~~~------ 169 (549)
+|||+++|++++|+++.++.+++..++++++++++|+++... ..+ .. ....++.++..
T Consensus 125 ~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 204 (628)
T TIGR02316 125 MLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRL 204 (628)
T ss_pred HHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCc
Confidence 999999999999999999999999999999999999976421 111 11 12234444321
Q ss_pred ------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecCh
Q 008895 170 ------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (549)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl 243 (549)
.+.++..... ..........++++++|+|||||||.||||+++|.++...............++|++++.+|+
T Consensus 205 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 283 (628)
T TIGR02316 205 IPGRDVDYAALRTQHE-DAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDV 283 (628)
T ss_pred ccCccccHHHHhhccc-cCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCC
Confidence 1222211110 001111224568999999999999999999999999865443333322256778999999999
Q ss_pred hhHHHH-HHHHHHhhhccEEEEecC----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC--CCCCCCCCceEEEEec
Q 008895 244 FHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGA 316 (549)
Q Consensus 244 ~~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~~G 316 (549)
.|..++ ..++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|.+... ....++++||.+++||
T Consensus 284 ~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG 363 (628)
T TIGR02316 284 GWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAG 363 (628)
T ss_pred CeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEec
Confidence 999887 667889999999998763 578999999999999999999999998887543 2345689999999999
Q ss_pred CCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCc--CCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEE
Q 008895 317 APLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP--DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSI 394 (549)
Q Consensus 317 e~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~--~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v 394 (549)
+++++++.+++++.+ +..+++.||+||++..++..... ......+++|.|++|++++|+|++++++++.|+.|||++
T Consensus 364 e~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v 442 (628)
T TIGR02316 364 EPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTV 442 (628)
T ss_pred CCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEE
Confidence 999999999999988 68899999999998544332211 112355789999999999999976899999999999999
Q ss_pred ecC---CcccccCCCcccccccc---CCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcce
Q 008895 395 RGP---TIMKGYVGEPEVTSATL---LPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVAD 468 (549)
Q Consensus 395 ~g~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~ 468 (549)
+|| +.+.||+++++.+...+ ..++||+|||+|++|++|+++++||+||+||++|++|+|.|||++|.+||+|.+
T Consensus 443 ~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~e 522 (628)
T TIGR02316 443 VPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAE 522 (628)
T ss_pred ecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcce
Confidence 998 57789999987766544 247899999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCceeEEEEEeCCCCCC--------CHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 469 AAVIPYPDEEAGQMPMAFVVRQPHSSL--------NEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 469 ~~vv~~~~~~~~~~~~~~v~~~~~~~~--------~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
|+|++++++..++.+++||+++++... ..++|+++++++|++|++|+.|+++++||+|++||++|+.|++++
T Consensus 523 a~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~ 602 (628)
T TIGR02316 523 VAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALA 602 (628)
T ss_pred EEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHH
Confidence 999999999889999999998765321 246899999999999999999999999999999999999999988
Q ss_pred CcCC
Q 008895 541 VPSG 544 (549)
Q Consensus 541 ~~~~ 544 (549)
....
T Consensus 603 ~~~~ 606 (628)
T TIGR02316 603 EGRD 606 (628)
T ss_pred cCCC
Confidence 6543
No 11
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-72 Score=601.07 Aligned_cols=501 Identities=22% Similarity=0.302 Sum_probs=403.9
Q ss_pred CCCCHHHHHhhc-ccC--CCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChH
Q 008895 36 APISAVDYVSSL-RAT--LPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (549)
Q Consensus 36 ~~~~~~~~~~~~-~~~--~~~~~p~~~a~~~~~----~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~ 108 (549)
..+|....+.++ ++. + |+++|++... ..+++||+||.++++++|+.|++ +|+++||+|+++++|++++
T Consensus 56 ~~~n~~~~~l~~~~~~~~~----~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GDrV~i~~~n~~e~ 130 (647)
T PTZ00237 56 GELNTCYNVLDIHVKNPLK----RDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-LNISKNDNVLIYMANTLEP 130 (647)
T ss_pred CeeeHHHHHHHHhhcccCC----CCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHH
Confidence 346666555444 433 5 8999998631 13689999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc---------HHHHh---cC---C-CeEEEecC----
Q 008895 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---------VHKLA---KL---K-HRTILIDS---- 168 (549)
Q Consensus 109 ~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~---~~---~-~~~~~~~~---- 168 (549)
++++|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+. .. . ..++.+..
T Consensus 131 ~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 210 (647)
T PTZ00237 131 LIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDIT 210 (647)
T ss_pred HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcc
Confidence 99999999999999999999999999999999999999997521 11111 10 1 12332210
Q ss_pred -----------------Cchhhhhccc---CCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC
Q 008895 169 -----------------PEFDSMTMSW---NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS 228 (549)
Q Consensus 169 -----------------~~~~~~~~~~---~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~ 228 (549)
..|.++.... ............++++++|+|||||||.||||+++|.+.+..........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~ 290 (647)
T PTZ00237 211 SESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSI 290 (647)
T ss_pred cccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHh
Confidence 1122221110 00000112234678999999999999999999999998433333332222
Q ss_pred CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC--cC----HHHHHHHHHHhceeeeeecHHHHHHHHhCCCC-
Q 008895 229 PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FD----LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST- 301 (549)
Q Consensus 229 ~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~--~~----~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~- 301 (549)
......+++++..|+.|+.+...++.++..|+++++.+. +. +..+++.|+++++|+++++|++++.|++....
T Consensus 291 ~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 370 (647)
T PTZ00237 291 IEKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEA 370 (647)
T ss_pred cCCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccc
Confidence 245667899999999998766678889999999998753 12 68899999999999999999999999875321
Q ss_pred ----CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEc
Q 008895 302 ----DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVD 377 (549)
Q Consensus 302 ----~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d 377 (549)
...++++||.+++||+++++++.+++++.+ ++.+.+.||+||++...+.... ......+++|+|++|++++|+|
T Consensus 371 ~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i~d 448 (647)
T PTZ00237 371 TIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSILS 448 (647)
T ss_pred cccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccCC-CCCCCCCCCccCcCCceEEEEC
Confidence 334688999999999999999999999998 6899999999999865443221 2223447999999999999999
Q ss_pred CCCCCcCCCCCcceEEEecC---CcccccCCCccccccccCC-CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeCh
Q 008895 378 PETGDSLPPGKEGELSIRGP---TIMKGYVGEPEVTSATLLP-DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAP 453 (549)
Q Consensus 378 ~~~~~~~~~g~~Gel~v~g~---~~~~gy~~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~ 453 (549)
+++++++.|+.|||++++| +++.|||++++.+...|.. +|||+|||+|++|++|++++.||+||+||++|++|+|
T Consensus 449 -~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p 527 (647)
T PTZ00237 449 -EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQL 527 (647)
T ss_pred -CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCH
Confidence 5889999999999999986 7899999999988877753 6899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC---CCCH----HHHHHHHHhcCCCCCcccEEEEeCccCCC
Q 008895 454 AELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS---SLNE----AEIMEFVARQVSPYKKIRRVAFINAIPKS 526 (549)
Q Consensus 454 ~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~---~~~~----~~i~~~l~~~l~~~~~p~~i~~v~~lP~t 526 (549)
.+||++|.+||.|.+++|++++++..++.+++||+++++. ..+. ++|+++++++|+++++|+.|+++++||+|
T Consensus 528 ~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T 607 (647)
T PTZ00237 528 NTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKT 607 (647)
T ss_pred HHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCC
Confidence 9999999999999999999999998899999999987432 2333 46678889999999999999999999999
Q ss_pred CCCcccHHHHHcccCcCC
Q 008895 527 AAGKILRMELRKVAVPSG 544 (549)
Q Consensus 527 ~~GKv~r~~l~~~~~~~~ 544 (549)
++|||+|+.|++++....
T Consensus 608 ~sGKi~R~~Lr~~~~~~~ 625 (647)
T PTZ00237 608 KTGKIPRQIISKFLNDSN 625 (647)
T ss_pred CCccEeHHHHHHHHcCCC
Confidence 999999999999986443
No 12
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.9e-71 Score=586.71 Aligned_cols=518 Identities=39% Similarity=0.636 Sum_probs=440.0
Q ss_pred CceeccCCCCCCCCCCCCCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEE
Q 008895 19 TKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTA 98 (549)
Q Consensus 19 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V 98 (549)
.-.|++.....+.|. ..|+.+.+.+.++++ |+++|+++...++.+||.||.+++.++|+.|++ .|+++|++|
T Consensus 12 ~~~~~~~~~~~~~~~---~~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V 83 (546)
T PLN02330 12 EHIFRSRYPSVPVPD---KLTLPDFVLQDAELY----ADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRS-LGLRKGQVV 83 (546)
T ss_pred ceeeccCCCCCCCCC---CCcHHHHHhhhhhcC----CCccEEEecCCCCcccHHHHHHHHHHHHHHHHH-hCCCCCCEE
Confidence 445666666554433 378999999999999 999999976556899999999999999999999 899999999
Q ss_pred EEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecC------Cchh
Q 008895 99 FVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDS------PEFD 172 (549)
Q Consensus 99 ~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~------~~~~ 172 (549)
+++++|+.+++++++||+++|++++|+++..+.+++.++++.++++++++++.....+......++.++. ..|.
T Consensus 84 ~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 163 (546)
T PLN02330 84 VVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWK 163 (546)
T ss_pred EEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHH
Confidence 9999999999999999999999999999999999999999999999999999888777665555555542 2344
Q ss_pred hhhcccCCC-ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC-CCCCCCcEEEEecChhhHHHH-
Q 008895 173 SMTMSWNSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-PKRVSPAVMLFTMPYFHIYGL- 249 (549)
Q Consensus 173 ~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~~pl~~~~g~- 249 (549)
++....... .........++++++++|||||||.||+|.++|+++..+........ ......++.+..+|++|.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~ 243 (546)
T PLN02330 164 ELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGIT 243 (546)
T ss_pred HHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHH
Confidence 443322111 01112234568899999999999999999999999987665432222 112234678899999999988
Q ss_pred HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCC--CceEEEEecCCCCHHHHHHH
Q 008895 250 FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS--SLETVACGAAPLGKDTIMAF 327 (549)
Q Consensus 250 ~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~--~lr~v~~~Ge~l~~~~~~~~ 327 (549)
..++.++..|+++++.+.+++..+++.++++++|++.++|+++..++.........+. ++|.+++||+++++++++++
T Consensus 244 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~ 323 (546)
T PLN02330 244 GICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAF 323 (546)
T ss_pred HHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHH
Confidence 4567888899999999999999999999999999999999999999886544333343 57899999999999999999
Q ss_pred HHhCCCCcEEcccCccccccceecccCcCC---CCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccC
Q 008895 328 ASKFPKVVLVQAYGLTESTAGVFRTVGPDE---CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYV 404 (549)
Q Consensus 328 ~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~ 404 (549)
.+.|+++++++.||+||++.+......... ....+++|.|+++++++|+|++++++++.|+.|||+|+|+.++.||+
T Consensus 324 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~ 403 (546)
T PLN02330 324 EAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYY 403 (546)
T ss_pred HHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhc
Confidence 999988999999999999865543211111 12346899999999999999888999999999999999999999999
Q ss_pred CCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeE
Q 008895 405 GEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPM 484 (549)
Q Consensus 405 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~ 484 (549)
++++.+...+..+|||+|||+|+++++|++++.||.+|+++++|++|+|.+||++|.+++.|.+++|+++++...++.++
T Consensus 404 ~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 483 (546)
T PLN02330 404 NNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPA 483 (546)
T ss_pred cCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccccCceeE
Confidence 99999988888889999999999999999999999999999999999999999999999999999999999888889999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 485 AFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 485 ~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
++|+..+....+.++++++++++|+.++.|+.++++++||+|++||++|++|++++.+.+
T Consensus 484 a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~~ 543 (546)
T PLN02330 484 ACVVINPKAKESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSIN 543 (546)
T ss_pred EEEEECCCCCCCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhhh
Confidence 999987766677889999999999999999999999999999999999999999997654
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5.3e-72 Score=588.12 Aligned_cols=487 Identities=22% Similarity=0.249 Sum_probs=404.5
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|.+.++++ |+++|+.+.. .+++||+||.++++++|+.|.+ .+||+|+++++|++++++++|||++
T Consensus 19 ~~~~~~~~~~~~~~----p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~----~~gd~Val~~~n~~e~~~~~lA~~~ 89 (539)
T PRK06334 19 KTVLESFLKLCSEM----TTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK----YPDQHIGIMMPASAGAYIAYFATLL 89 (539)
T ss_pred CcHHHHHHHHHHhC----CCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh----ccCCeEEEEcCCchHHHHHHHHHHh
Confidence 58999999999999 9999998762 3689999999999999999997 3899999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCC-------CeEEEecCC----chhhhhccc----CCCc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-------HRTILIDSP----EFDSMTMSW----NSKH 182 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~~----~~~~ 182 (549)
+|++++|+++.++.+++.++++.+++++++++.+....+.+.. ..++.++.. .+.+..... ....
T Consensus 90 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (539)
T PRK06334 90 SGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFE 169 (539)
T ss_pred cCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhhcCCch
Confidence 9999999999999999999999999999999887665544321 123333211 001100000 0000
Q ss_pred ----cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhh
Q 008895 183 ----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAA 257 (549)
Q Consensus 183 ----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~ 257 (549)
........++++++++|||||||.||+|.++|+++..+.......+ ....+|++++.+|++|.+|+ ...+.++.
T Consensus 170 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 248 (539)
T PRK06334 170 WLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-SPKEDDVMMSFLPPFHAYGFNSCTLFPLL 248 (539)
T ss_pred hhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-CCCCCceEEEecchHhhhhhHHHHHHHHH
Confidence 0011234678999999999999999999999999998877666555 46778999999999999998 45678899
Q ss_pred hccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcE
Q 008895 258 LMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (549)
Q Consensus 258 ~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l 336 (549)
.|+++++.. .+++..+++.|+++++|+++++|+++..+++........++++|.+++||+++++++.+++.+.++++.+
T Consensus 249 ~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i 328 (539)
T PRK06334 249 SGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQL 328 (539)
T ss_pred cCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeE
Confidence 999988875 5799999999999999999999999999988765555678999999999999999999999999988999
Q ss_pred EcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCcccccccc-C
Q 008895 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATL-L 415 (549)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~ 415 (549)
++.||+||++.++..... ......+++|+|++|++++|+|++++.+++.|+.|||+|+|++++.||+++++.+.... .
T Consensus 329 ~~~YG~TE~~~~~~~~~~-~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~ 407 (539)
T PRK06334 329 RQGYGTTECSPVITINTV-NSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELG 407 (539)
T ss_pred EecccccccCceEEeccC-CCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccceeeC
Confidence 999999999876654322 22233467999999999999997788999999999999999999999999988654322 2
Q ss_pred CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcce------EEEEeecCCCCCceeEEEEEe
Q 008895 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVAD------AAVIPYPDEEAGQMPMAFVVR 489 (549)
Q Consensus 416 ~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~------~~vv~~~~~~~~~~~~~~v~~ 489 (549)
.++||+|||+|++|++|++++.||.||+||++|++|+|.|||++|.+||+|.+ ++|++.++. ...++++++.
T Consensus 408 ~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~--~~~~~~~~~~ 485 (539)
T PRK06334 408 GETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGE--KVRLCLFTTF 485 (539)
T ss_pred CceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCC--ceEEEEEEec
Confidence 36899999999999999999999999999999999999999999999999987 677776642 2344555543
Q ss_pred CCCCCCCHHHHHHHHHhc-CCCCCcccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 490 QPHSSLNEAEIMEFVARQ-VSPYKKIRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 490 ~~~~~~~~~~i~~~l~~~-l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
. .+.+++.++++++ ++.|+.|+.+.++++||+|++|||+|++|++++.
T Consensus 486 ~----~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~ 534 (539)
T PRK06334 486 P----TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAK 534 (539)
T ss_pred c----CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHHH
Confidence 2 3567899999886 7899999999999999999999999999998754
No 14
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2.4e-71 Score=594.68 Aligned_cols=498 Identities=23% Similarity=0.322 Sum_probs=414.0
Q ss_pred CCHHHH-HhhcccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHH
Q 008895 38 ISAVDY-VSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (549)
Q Consensus 38 ~~~~~~-~~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~ 112 (549)
+|+... +.++++++ |+++|++.... .+++||+||.++++++|+.|++ +|+++||+|+++++|++++++++
T Consensus 56 ~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~ 130 (625)
T TIGR02188 56 LNVSYNCVDRHLEAR----PDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-LGVKKGDRVAIYMPMIPEAAIAM 130 (625)
T ss_pred EEHHHHHHHHhhccC----CCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHH
Confidence 555554 44556667 99999986422 3589999999999999999999 99999999999999999999999
Q ss_pred HHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHH---------H----HhcCC--Ce-EEEecCC-------
Q 008895 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH---------K----LAKLK--HR-TILIDSP------- 169 (549)
Q Consensus 113 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~----~~~~~--~~-~~~~~~~------- 169 (549)
|||+++|++++|+++.++.+++.+++++++++++|+++.... . +.... .. ++.++..
T Consensus 131 lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (625)
T TIGR02188 131 LACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWV 210 (625)
T ss_pred HHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCcc
Confidence 999999999999999999999999999999999999875321 1 11111 11 3333211
Q ss_pred -----chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChh
Q 008895 170 -----EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYF 244 (549)
Q Consensus 170 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~ 244 (549)
.+.++..... .........++++++|+|||||||.||+|+++|++++..............++|++++..|++
T Consensus 211 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 288 (625)
T TIGR02188 211 EGRDVWWHDLMAKAS--AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVG 288 (625)
T ss_pred ccccccHHHHHhhcC--CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCch
Confidence 1222221111 011222356788999999999999999999999998765544333333567789999999999
Q ss_pred hHHHH-HHHHHHhhhccEEEEecC----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecC
Q 008895 245 HIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAA 317 (549)
Q Consensus 245 ~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge 317 (549)
|+.+. +.++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|.+.... ...+++++|.++++|+
T Consensus 289 ~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~ 368 (625)
T TIGR02188 289 WITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGE 368 (625)
T ss_pred hhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 99887 567889999999998753 4789999999999999999999999999876542 3346889999999999
Q ss_pred CCCHHHHHHHHHhCC--CCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCC-CCCcceEEE
Q 008895 318 PLGKDTIMAFASKFP--KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLP-PGKEGELSI 394 (549)
Q Consensus 318 ~l~~~~~~~~~~~~~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~-~g~~Gel~v 394 (549)
++++++++++.+.++ ++++++.||+||++..++...........+++|+|++|++++|+| +++++++ .|+.|||+|
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v 447 (625)
T TIGR02188 369 PINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVI 447 (625)
T ss_pred CCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEE
Confidence 999999999999884 378999999999987755432222234568899999999999999 7888898 899999999
Q ss_pred ec--CCcccccCCCccccccccCC--CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEE
Q 008895 395 RG--PTIMKGYVGEPEVTSATLLP--DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAA 470 (549)
Q Consensus 395 ~g--~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~ 470 (549)
+| |+++.|||++++.+...+.. +|||+|||+|++|++|++++.||+||+||++|++|+|.+||++|.+||+|.+++
T Consensus 448 ~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~ 527 (625)
T TIGR02188 448 KQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAA 527 (625)
T ss_pred ccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEE
Confidence 99 68999999999877766543 789999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEeCCCCCCC---HHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 471 VIPYPDEEAGQMPMAFVVRQPHSSLN---EAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 471 vv~~~~~~~~~~~~~~v~~~~~~~~~---~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
|++.+++..++.+++||+++++...+ .++|+++++++|++++.|+.|+++++||+|++||++|+.|++++...
T Consensus 528 vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 528 VVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred EEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 99999988899999999988765544 36899999999999999999999999999999999999999998754
No 15
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.1e-71 Score=590.80 Aligned_cols=498 Identities=29% Similarity=0.403 Sum_probs=416.0
Q ss_pred CCCCCHHHHHhhcccCCCCCCCCCcEEEEC------CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChH
Q 008895 35 DAPISAVDYVSSLRATLPWRDDDTVALINS------VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (549)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~------~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~ 108 (549)
..+.|+.++|.+.++++ |+++|+++. ...+++||+||.+++.++|+.|++ +|+++||+|+++++|++++
T Consensus 22 ~~~~t~~~~l~~~a~~~----p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gi~~gd~V~i~~~n~~e~ 96 (632)
T PRK07529 22 DLPASTYELLSRAAARH----PDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-LGVGPGDVVAFLLPNLPET 96 (632)
T ss_pred cCCCCHHHHHHHHHHHC----CCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHH
Confidence 34469999999999999 999999852 135799999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH-----HHHh----cC-CCe-EEEecCC--------
Q 008895 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLA----KL-KHR-TILIDSP-------- 169 (549)
Q Consensus 109 ~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~----~~-~~~-~~~~~~~-------- 169 (549)
++++|||+++| +++|+++.++.+++.++++.++++++|++.... .++. .. ... ++.++..
T Consensus 97 ~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 175 (632)
T PRK07529 97 HFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKR 175 (632)
T ss_pred HHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccc
Confidence 99999999999 568999999999999999999999999975431 1211 11 111 2223221
Q ss_pred ---------------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCC
Q 008895 170 ---------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSP 234 (549)
Q Consensus 170 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~ 234 (549)
.+.+.................++++++++|||||||.||+|.++|+++.++.......+ ...++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~ 254 (632)
T PRK07529 176 LAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-GLGPG 254 (632)
T ss_pred ccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-CCCCC
Confidence 12222221111101111233568999999999999999999999999988776666555 45788
Q ss_pred cEEEEecChhhHHHH-HHHHHHhhhccEEEEecCc---C---HHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCC
Q 008895 235 AVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRF---D---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS 307 (549)
Q Consensus 235 ~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~---~---~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~ 307 (549)
+++++.+|++|.+++ ...+.++..|+++++.++. + ...+++.++++++|++.++|+++..|++... ...+++
T Consensus 255 d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~ 333 (632)
T PRK07529 255 DTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDIS 333 (632)
T ss_pred CEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCcc
Confidence 999999999999988 5678889999999987642 1 3688999999999999999999999987653 234688
Q ss_pred CceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcC-CCC---Cc
Q 008895 308 SLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDP-ETG---DS 383 (549)
Q Consensus 308 ~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~---~~ 383 (549)
++|.+++||+++++++.+++++.+ ++++++.||+||++.++.... .......+++|.|+|+++++++.. +++ ++
T Consensus 334 slr~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~-~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~ 411 (632)
T PRK07529 334 SLRYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNP-PDGERRIGSVGLRLPYQRVRVVILDDAGRYLRD 411 (632)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCC-ccccccCCCcccccCCceEEEEEcCCCCccccc
Confidence 999999999999999999999988 899999999999987665432 222335689999999999998531 445 78
Q ss_pred CCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcC
Q 008895 384 LPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSH 463 (549)
Q Consensus 384 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~ 463 (549)
++.|+.|||+|+|++++.||++++. +...|..+|||+|||+|++|++|++++.||+||+||++|++|+|.+||++|.+|
T Consensus 412 ~~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~ 490 (632)
T PRK07529 412 CAVDEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRH 490 (632)
T ss_pred CCCCCceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999998654 556666789999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCC-CCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 464 REVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVS-PYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 464 ~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~-~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
|+|.+++|++.++...++.++++|++.++...+.++++++++++++ .+++|+.|+++++||+|++|||+|++|++++..
T Consensus 491 p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~~ 570 (632)
T PRK07529 491 PAVALAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDHIAERAAVPKHVRILDALPKTAVGKIFKPALRRDAIR 570 (632)
T ss_pred CCeeEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCcccHHHHHHHHHH
Confidence 9999999999999888999999999988777888999999999997 579999999999999999999999999998765
Q ss_pred C
Q 008895 543 S 543 (549)
Q Consensus 543 ~ 543 (549)
.
T Consensus 571 ~ 571 (632)
T PRK07529 571 R 571 (632)
T ss_pred H
Confidence 3
No 16
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-70 Score=588.59 Aligned_cols=499 Identities=23% Similarity=0.325 Sum_probs=412.8
Q ss_pred CCCHHH-HHhhcccCCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHH
Q 008895 37 PISAVD-YVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (549)
Q Consensus 37 ~~~~~~-~~~~~~~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~ 111 (549)
.+|+.. .+.++++++ |+++|+++.. ..+++||+||.++++++|++|++ .|+++||+|+++++|+++++++
T Consensus 65 ~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~ 139 (637)
T PRK00174 65 ELNVSYNCLDRHLKTR----GDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKS-LGVKKGDRVAIYMPMIPEAAVA 139 (637)
T ss_pred EeEHHHHHHHHhhccC----CCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 356554 455666777 9999998642 23589999999999999999999 9999999999999999999999
Q ss_pred HHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHH---------HH----hcC-CC-eEEEecCC-------
Q 008895 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH---------KL----AKL-KH-RTILIDSP------- 169 (549)
Q Consensus 112 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~----~~~-~~-~~~~~~~~------- 169 (549)
+|||+++|++++|++|.++.+++.+++++++++++|+++.... .+ ... .. .++.++..
T Consensus 140 ~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (637)
T PRK00174 140 MLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWV 219 (637)
T ss_pred HHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcC
Confidence 9999999999999999999999999999999999999765321 11 111 11 12222211
Q ss_pred -----chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChh
Q 008895 170 -----EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYF 244 (549)
Q Consensus 170 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~ 244 (549)
.+.++..... .........++++++|+|||||||.||+|+++|++++.+.............+|++++.+|++
T Consensus 220 ~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 297 (637)
T PRK00174 220 EGRDLWWHELVAGAS--DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVG 297 (637)
T ss_pred CCCcccHHHHHhhcC--CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCch
Confidence 1222221111 011122345688999999999999999999999998765544333322467789999999999
Q ss_pred hHHHH-HHHHHHhhhccEEEEecC----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecC
Q 008895 245 HIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAA 317 (549)
Q Consensus 245 ~~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge 317 (549)
|..+. +.++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|++.... ...++++||.+++||+
T Consensus 298 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge 377 (637)
T PRK00174 298 WVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGE 377 (637)
T ss_pred HhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCC
Confidence 99887 567889999999998752 4789999999999999999999999999876542 2346789999999999
Q ss_pred CCCHHHHHHHHHhCC--CCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEe
Q 008895 318 PLGKDTIMAFASKFP--KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIR 395 (549)
Q Consensus 318 ~l~~~~~~~~~~~~~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 395 (549)
++++++.+++.+.++ ++++++.||+||++..+............+++|+|++|++++|+| +++++++.|+.|||+|+
T Consensus 378 ~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~ 456 (637)
T PRK00174 378 PINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIK 456 (637)
T ss_pred CCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEc
Confidence 999999999999884 378999999999987655432211223457899999999999999 77899999999999999
Q ss_pred c--CCcccccCCCccccccccC--CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEE
Q 008895 396 G--PTIMKGYVGEPEVTSATLL--PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAV 471 (549)
Q Consensus 396 g--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~v 471 (549)
| |+++.|||++++.+...+. .+|||+|||+|++|++|++++.||+||+||++|++|+|.+||++|.++|+|.+++|
T Consensus 457 g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~V 536 (637)
T PRK00174 457 DPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAV 536 (637)
T ss_pred CCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEE
Confidence 9 6899999999987776653 37899999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceeEEEEEeCCCCCCC---HHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 472 IPYPDEEAGQMPMAFVVRQPHSSLN---EAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 472 v~~~~~~~~~~~~~~v~~~~~~~~~---~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
++.++...++.++++|++.++...+ .++|.++++++|+.++.|..|+++++||+|++||++|++|++++...
T Consensus 537 vg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 537 VGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred EeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 9999988899999999988765444 47899999999999999999999999999999999999999987654
No 17
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-70 Score=580.15 Aligned_cols=496 Identities=28% Similarity=0.479 Sum_probs=417.9
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.|+.+.|...++++ |+++|+++. ++.+||.||+++++++|++|.+..|+++||+|+++++|+.++++++|||++
T Consensus 24 ~~~~~~l~~~a~~~----p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~ 97 (562)
T PRK05677 24 PNIQAVLKQSCQRF----ADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMR 97 (562)
T ss_pred CcHHHHHHHHHHhC----CCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 58999999999988 999999987 789999999999999999998635999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhc----CCCeEEEecC-Cc----------------------
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHRTILIDS-PE---------------------- 170 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~~~~~~-~~---------------------- 170 (549)
+|++++|++|.++.+++.+++++++++++|++......+.+ .+...+.+.. .+
T Consensus 98 ~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
T PRK05677 98 AGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVP 177 (562)
T ss_pred cCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhcccccc
Confidence 99999999999999999999999999999998765443322 1222221110 00
Q ss_pred ---------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCC--CCCCCcEEEE
Q 008895 171 ---------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLF 239 (549)
Q Consensus 171 ---------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~ 239 (549)
+.+........ ........+++.++++|||||||.||+|+++|+++..........+. .....+++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (562)
T PRK05677 178 AYHLPQAVKFNDALAKGAGQ-PVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIA 256 (562)
T ss_pred ccCCcccccHHHHHhcCCCC-CCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEE
Confidence 00000000000 01112235689999999999999999999999999876654443321 1223468899
Q ss_pred ecChhhHHHH-HHHHHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecC
Q 008895 240 TMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAA 317 (549)
Q Consensus 240 ~~pl~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge 317 (549)
.+|++|.+++ ...+..+..|...++.. ++++..+++.|+++++|+++++|+++..++.........++++|.+++||+
T Consensus 257 ~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~ 336 (562)
T PRK05677 257 PLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGM 336 (562)
T ss_pred cCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCc
Confidence 9999999998 45666777787766654 578999999999999999999999999998765544556789999999999
Q ss_pred CCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecC
Q 008895 318 PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP 397 (549)
Q Consensus 318 ~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~ 397 (549)
++++++.+.|.+.+ ++++++.||+||++.++.... ......+++|+|++++.++|+| ++++.++.|+.|||+|+|+
T Consensus 337 ~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~--~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~ 412 (562)
T PRK05677 337 ALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNP--SQAIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKGP 412 (562)
T ss_pred cCCHHHHHHHHHHc-CCCeeccCCccccCcceeecC--ccCCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEecC
Confidence 99999999999987 789999999999987665432 2233557899999999999999 5688999999999999999
Q ss_pred CcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCC
Q 008895 398 TIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDE 477 (549)
Q Consensus 398 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~ 477 (549)
.++.||+++++.+...|..+|||+|||+|+++++|.+++.||++|+++++|++|+|.+||++|.++|+|.+++|+++++.
T Consensus 413 ~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~ 492 (562)
T PRK05677 413 QVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPDE 492 (562)
T ss_pred ccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCc
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 478 EAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 478 ~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
..++.++++++..++...+.++++++++++|++|++|..++++++||+|++||++|++|+++++.+-
T Consensus 493 ~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~~ 559 (562)
T PRK05677 493 KSGEAIKVFVVVKPGETLTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELKKA 559 (562)
T ss_pred cCCceEEEEEEeCCCCCCCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHHhc
Confidence 8888999999887666678899999999999999999999999999999999999999999776543
No 18
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=4.8e-70 Score=576.13 Aligned_cols=496 Identities=26% Similarity=0.424 Sum_probs=424.9
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~l 113 (549)
.++.+.+.+.++.+ |+++|+++... .+.+||.||.++++++|++|++ .|+++|++|+++++|++++++++|
T Consensus 24 ~~l~~~l~~~a~~~----p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~Val~~~n~~e~~~~~l 98 (547)
T PRK13295 24 RTINDDLDACVASC----PDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLAR-LGVGRGDVVSCQLPNWWEFTVLYL 98 (547)
T ss_pred CCHHHHHHHHHHHC----CCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHH
Confidence 68999999999999 99999987521 2799999999999999999998 899999999999999999999999
Q ss_pred HHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc-----HHHHhc----C-CC-eEEEecC---Cchhhhhccc-
Q 008895 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKLAK----L-KH-RTILIDS---PEFDSMTMSW- 178 (549)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~----~-~~-~~~~~~~---~~~~~~~~~~- 178 (549)
||+++|++++|++|.++.+++.++++.++++++++++.. .+.+.. . .. .++.++. ..+.++....
T Consensus 99 a~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (547)
T PRK13295 99 ACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFEALLITPA 178 (547)
T ss_pred HHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHHHHhhCCc
Confidence 999999999999999999999999999999999998753 111111 1 11 2333332 1233332111
Q ss_pred ----CCC-ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHH
Q 008895 179 ----NSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFC 252 (549)
Q Consensus 179 ----~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~ 252 (549)
... .........++++++++|||||||.||+|.++|+++..+.......+ ...+++++++.+|++|.+++ ..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~g~~~~~ 257 (547)
T PRK13295 179 WEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-GLGADDVILMASPMAHQTGFMYGL 257 (547)
T ss_pred cccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-CCCCCCeEEEecCchhhhhHHHHH
Confidence 000 00111234568899999999999999999999999988887766655 46778999999999999887 567
Q ss_pred HHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCC
Q 008895 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (549)
Q Consensus 253 ~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~ 332 (549)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..+..........++++|.+++||+++++++.+++.+.+
T Consensus 258 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~- 336 (547)
T PRK13295 258 MMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL- 336 (547)
T ss_pred HHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-
Confidence 8889999999998888999999999999999999999999999887766666788999999999999999999999998
Q ss_pred CCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCcccccc
Q 008895 333 KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSA 412 (549)
Q Consensus 333 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~ 412 (549)
++++++.||+||++.+..............++|+|++++.++|+| +++++++.|+.|||+|+|+.++.||+++++.+..
T Consensus 337 ~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~ 415 (547)
T PRK13295 337 GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGT 415 (547)
T ss_pred CCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccccCCcccccc
Confidence 899999999999987655433222233456889999999999999 5688999999999999999999999999988876
Q ss_pred ccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCC
Q 008895 413 TLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPH 492 (549)
Q Consensus 413 ~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~ 492 (549)
. .+|||+|||+|+++++|.+++.||.+|++|.+|++|+|.+||++|.++++|.+++|+++++...++.+++++++.++
T Consensus 416 ~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~ 493 (547)
T PRK13295 416 D--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPG 493 (547)
T ss_pred C--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCC
Confidence 5 57899999999999999999999999999999999999999999999999999999999988888899999998876
Q ss_pred CCCCHHHHHHHHHh-cCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 493 SSLNEAEIMEFVAR-QVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 493 ~~~~~~~i~~~l~~-~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
...+.+++.+++++ +++++++|..++++++||+|++||++|++|++++.+.
T Consensus 494 ~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~~ 545 (547)
T PRK13295 494 QSLDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLRGE 545 (547)
T ss_pred CCCCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHhcC
Confidence 66677899999986 7999999999999999999999999999999988654
No 19
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-72 Score=516.69 Aligned_cols=495 Identities=27% Similarity=0.378 Sum_probs=433.4
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.+.++|+++ ||++|++++ ++.+||+||.++++++|..|++ +|+++||+|.+..+|..+|++++||+++
T Consensus 28 ~~l~d~L~~~A~~~----pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~-lGi~~Gd~vlvQLpN~~ef~~~~FALlr 100 (542)
T COG1021 28 RTLTDILTDHAARY----PDRIAVIDG--ERRLSYAELDQRADRLAAGLRR-LGIKPGDTVLVQLPNVAEFYITFFALLR 100 (542)
T ss_pred CcHHHHHHHHHhhc----CCceEEecC--cccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCchHHHHHHHHHHHH
Confidence 78999999999999 999999998 7889999999999999999999 9999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc--------HHHH-hcC-CCeEEEecC-Cc-h--hhhhcccCCCcc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--------VHKL-AKL-KHRTILIDS-PE-F--DSMTMSWNSKHE 183 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~-~~~-~~~~~~~~~-~~-~--~~~~~~~~~~~~ 183 (549)
+|+.+|..=|.-...+|....+..+++..|.+... ...+ .+. ..+.+.+.+ .+ . ............
T Consensus 101 lGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a~~~ 180 (542)
T COG1021 101 LGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPAGLF 180 (542)
T ss_pred cCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCccccC
Confidence 99999998888889999999999999999987642 1111 121 234443332 21 1 111111111111
Q ss_pred ccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH--HHHHHHhhhccE
Q 008895 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL--FFCFRAAALMET 261 (549)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~--~~~~~~l~~g~~ 261 (549)
.+....++++++++..+.||||+||.|..||+....+.....+.. ++....+.++.+|..|.+-+ -..++.++.|++
T Consensus 181 ~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~ 259 (542)
T COG1021 181 TPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-GFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGT 259 (542)
T ss_pred CcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-CcCccceEEEecccccCCCCCCcchhheeeeccE
Confidence 223445778899999999999999999999999998888887777 57889999999999999887 568899999999
Q ss_pred EEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccC
Q 008895 262 AVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (549)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG 341 (549)
+|+.+..+++..+.+|+++++|+...+|.+...|++..+....+++|||.+-+||..+++++.+++...+ ++.+.+.||
T Consensus 260 VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQVFG 338 (542)
T COG1021 260 VVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQVFG 338 (542)
T ss_pred EEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHHHHhh
Confidence 9999999999999999999999999999999999999988888999999999999999999999999999 999999999
Q ss_pred ccccccceecccCcCCCCCCCcccccc-CCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCee
Q 008895 342 LTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (549)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~ 420 (549)
|.|.-. .+.-..+.......+-|+|+ |.-+++|+| ++|+++++|++|+|..+||+..+|||+.|+.+...|+.+|+|
T Consensus 339 MAEGLv-nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFY 416 (542)
T COG1021 339 MAEGLV-NYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFY 416 (542)
T ss_pred hhhhhh-cccccCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCce
Confidence 999533 22222333333446789998 888999999 889999999999999999999999999999999999999999
Q ss_pred ecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHH
Q 008895 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEI 500 (549)
Q Consensus 421 ~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i 500 (549)
+|||+++++++|++.+.||.||+|+.+|++|...|||+.|..||.|.+|++|..+|.-.||+.++||+.++.. .+..++
T Consensus 417 rsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~-~~~~ql 495 (542)
T COG1021 417 RSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPP-LRAAQL 495 (542)
T ss_pred ecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCC-CCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998654 788999
Q ss_pred HHHHHh-cCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 501 MEFVAR-QVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 501 ~~~l~~-~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
+++|++ .+..|++|..|.+++.+|.|+-||||+++|++.+....
T Consensus 496 r~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~~ 540 (542)
T COG1021 496 RRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASRL 540 (542)
T ss_pred HHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhhc
Confidence 999977 49999999999999999999999999999999876554
No 20
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-70 Score=571.84 Aligned_cols=487 Identities=27% Similarity=0.426 Sum_probs=424.2
Q ss_pred CHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHc
Q 008895 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (549)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~ 118 (549)
.+.+.+.+.++.+ |+++|++++ ++.+||.||.++++++|+.|+++.|+++|++|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~a~~~----p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 76 (496)
T PRK06839 3 GIAYWIEKRAYLH----PDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKV 76 (496)
T ss_pred cHHHHHHHHHHHC----CCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 6788999999999 999999987 8999999999999999999985479999999999999999999999999999
Q ss_pred CCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCC-----CeEEEecCCchhhhhcccCCCccccccccCCCC
Q 008895 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----HRTILIDSPEFDSMTMSWNSKHELDRAKVCQSD 193 (549)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (549)
|++++|+++..+.+++..+++.++++++++++.......... ...+.+. ++.+...... .......+++
T Consensus 77 G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~ 150 (496)
T PRK06839 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISIT--SLKEIEDRKI----DNFVEKNESA 150 (496)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEec--chHhhhccCC----CCCCCCCCCC
Confidence 999999999999999999999999999999987765544321 1222222 2222221111 1112345678
Q ss_pred EEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEecCcCHHH
Q 008895 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKM 272 (549)
Q Consensus 194 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~ 272 (549)
+++++|||||||.||+|.++|.++..+.......+ ....++++++.+|++|.+|+ ...+.++..|+++++.+.+++..
T Consensus 151 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~ 229 (496)
T PRK06839 151 SFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-DLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTK 229 (496)
T ss_pred cEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-CCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHH
Confidence 99999999999999999999999977665555555 46778899999999999988 45577888999999888899999
Q ss_pred HHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecc
Q 008895 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (549)
Q Consensus 273 ~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~ 352 (549)
+++.++++++|++.++|++++.+++........++++|.+++||+++++++.+.+.+. ++++.+.||+||++..++..
T Consensus 230 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~ 307 (496)
T PRK06839 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFML 307 (496)
T ss_pred HHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEec
Confidence 9999999999999999999999998876666778999999999999999999999986 78999999999998765543
Q ss_pred cCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCC
Q 008895 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (549)
Q Consensus 353 ~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g 432 (549)
.........+++|+|+++++++|+|+ +++.++.|+.|||+|+|+.++.||+++++.+...+ .+|||+|||+|+++++|
T Consensus 308 ~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g 385 (496)
T PRK06839 308 SEEDARRKVGSIGKPVLFCDYELIDE-NKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDG 385 (496)
T ss_pred ccccccccCCCCcccCCCceEEEECC-CcCCCCCCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCC
Confidence 33233345679999999999999994 55669999999999999999999999999888776 58999999999999999
Q ss_pred eEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Q 008895 433 FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYK 512 (549)
Q Consensus 433 ~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~ 512 (549)
++++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.++...++.++++|+.++....+.++++++++++|+.++
T Consensus 386 ~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~ 465 (496)
T PRK06839 386 FVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRLFLAKYK 465 (496)
T ss_pred cEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHhhCcCCC
Confidence 99999999999999999999999999999999999999999999888899999999887777788999999999999999
Q ss_pred cccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 513 KIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 513 ~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+|..+++++++|+|++||++|++|+++..+
T Consensus 466 ~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 466 IPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred CCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 999999999999999999999999988754
No 21
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.7e-70 Score=574.25 Aligned_cols=482 Identities=25% Similarity=0.346 Sum_probs=413.4
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|.+.++++ |+++|+++. ++++||.||.++++++|++|.+ .|+++|++|+++++|+.++++++|||++
T Consensus 43 ~~~~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 115 (537)
T PRK13382 43 MGPTSGFAIAAQRC----PDRPGLIDE--LGTLTWRELDERSDALAAALQA-LPIGEPRVVGIMCRNHRGFVEALLAANR 115 (537)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEeC--CCeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEecCcHHHHHHHHHHHH
Confidence 68999999999999 999999987 6799999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC------CCeEEEecCC----chhhhhcccCCCcccccc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHRTILIDSP----EFDSMTMSWNSKHELDRA 187 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 187 (549)
+|++++|+++.++.+++.+++++++++++|++......+... ....+.++.. .++.+..... . ...
T Consensus 116 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~ 191 (537)
T PRK13382 116 IGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAHA---G-QRP 191 (537)
T ss_pred cCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhccC---c-CCC
Confidence 999999999999999999999999999999998765544321 1112222211 1222211111 0 011
Q ss_pred ccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC
Q 008895 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (549)
Q Consensus 188 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~ 267 (549)
...+++.++++|||||||.||+|.++|+++..........+ ....+++++..+|++|.+|+...+.++..|+++++...
T Consensus 192 ~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~~ 270 (537)
T PRK13382 192 EPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-PWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRRR 270 (537)
T ss_pred CCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-CCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECCC
Confidence 22457889999999999999999999998887777666555 35677889999999999999888889999999999888
Q ss_pred cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCcccc
Q 008895 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (549)
Q Consensus 268 ~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~ 345 (549)
+++..+++.|+++++|++.++|+++..+++.... ...+++++|.+++||+++++++++.|.+.+ +..+++.||+||+
T Consensus 271 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~ 349 (537)
T PRK13382 271 FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEA 349 (537)
T ss_pred cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeccccccc
Confidence 9999999999999999999999999999876432 233457899999999999999999999999 5679999999999
Q ss_pred ccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCce
Q 008895 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDL 425 (549)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~ 425 (549)
+.++.... .......+++|+|++++.++|+| +++++++.|+.|||+++|++++.||+ ++.+. .+ .+|||+|||+
T Consensus 350 ~~~~~~~~-~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~-~~-~~g~~~TGDl 423 (537)
T PRK13382 350 GMIATATP-ADLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGYT--SGSTK-DF-HDGFMASGDV 423 (537)
T ss_pred CcceecCh-hHhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCcc--ccchh-hc-cCCCEeeCce
Confidence 87665432 22234567999999999999999 56889999999999999999999998 44443 34 3799999999
Q ss_pred EEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHH
Q 008895 426 CYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVA 505 (549)
Q Consensus 426 ~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~ 505 (549)
++++++|++++.||+||+||.+|++|+|.+||.+|.++|+|.+++|++.++...++.++++|++.+....+.++++++++
T Consensus 424 ~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~ 503 (537)
T PRK13382 424 GYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQHVR 503 (537)
T ss_pred EEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888889999999987766677899999999
Q ss_pred hcCCCCCcccEEEEeCccCCCCCCcccHHHHHc
Q 008895 506 RQVSPYKKIRRVAFINAIPKSAAGKILRMELRK 538 (549)
Q Consensus 506 ~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~ 538 (549)
++|+.+++|..++++++||+|++||++|++|++
T Consensus 504 ~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 504 DNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred HhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 999999999999999999999999999999975
No 22
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.8e-70 Score=574.63 Aligned_cols=493 Identities=31% Similarity=0.498 Sum_probs=426.5
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhc-CCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVT-RLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~-g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
.++.+.|...+.++ |+++|+++. ++++||+||.+++.++|+.|.+ . |+++|++|+++++|+++++++++||+
T Consensus 10 ~tl~~~l~~~a~~~----~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~-~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 82 (546)
T PRK08314 10 TSLFHNLEVSARRY----PDKTAIVFY--GRAISYRELLEEAERLAGYLQQ-ECGVRKGDRVLLYMQNSPQFVIAYYAIL 82 (546)
T ss_pred CCHHHHHHHHHHHc----CCCcceeec--CceecHHHHHHHHHHHHHHHHH-hhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 78999999999999 999999987 7899999999999999999998 7 99999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCe-EEEecCC----------------------
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSP---------------------- 169 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~---------------------- 169 (549)
++|++++|++|..+.+++.++++.+++++++++......+... ... .+.....
T Consensus 83 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (546)
T PRK08314 83 RANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQ 162 (546)
T ss_pred HcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccc
Confidence 9999999999999999999999999999999998776654421 111 1111100
Q ss_pred --------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEec
Q 008895 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (549)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (549)
.+.+...... ........++++++++|||||||.||+|.++|++++.++....... .....|++++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~ 238 (546)
T PRK08314 163 ALAPGGVVAWKEALAAGL---APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-NSTPESVVLAVL 238 (546)
T ss_pred cccccccccHHHHhcccC---CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCceEEEEc
Confidence 0111111000 1112234568999999999999999999999999998888766665 467889999999
Q ss_pred ChhhHHHH-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCC
Q 008895 242 PYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (549)
Q Consensus 242 pl~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~ 320 (549)
|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..++.........++++|.+++||++++
T Consensus 239 p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 239 PLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred CchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 99999998 56778999999999999899999999999999999999999999988766555566889999999999999
Q ss_pred HHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcc
Q 008895 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (549)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 400 (549)
+++.+++.+.+ +.++++.||+||++....... ......+++|.|+++++++|+|+++++.++.|+.|||+|+|++++
T Consensus 319 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~--~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 395 (546)
T PRK08314 319 EAVAERLKELT-GLDYVEGYGLTETMAQTHSNP--PDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVF 395 (546)
T ss_pred HHHHHHHHHHc-CCcEEecccccccccceecCC--CcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchh
Confidence 99999999998 789999999999987655422 222345789999999999999988899999999999999999999
Q ss_pred cccCCCccccccccCC---CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCC
Q 008895 401 KGYVGEPEVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDE 477 (549)
Q Consensus 401 ~gy~~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~ 477 (549)
.||+++++.+...|.. ++||+|||+|+++++|.+++.||+||+++++|++|+|.+||++|.++|+|.+++|++.++.
T Consensus 396 ~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~ 475 (546)
T PRK08314 396 KGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPDP 475 (546)
T ss_pred ccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCCc
Confidence 9999999988877642 3599999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEEeCCCC--CCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 478 EAGQMPMAFVVRQPHS--SLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 478 ~~~~~~~~~v~~~~~~--~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
..++.++++++..+.. ..+.+++.++++++|+++++|..++++++||+|.+||++|++|++......
T Consensus 476 ~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~~~ 544 (546)
T PRK08314 476 RRGETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKARA 544 (546)
T ss_pred ccCceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHhhhc
Confidence 8889999999987653 345689999999999999999999999999999999999999998776554
No 23
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-70 Score=591.70 Aligned_cols=481 Identities=21% Similarity=0.293 Sum_probs=405.6
Q ss_pred CCHHHHHhhcccC--CCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHH
Q 008895 38 ISAVDYVSSLRAT--LPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (549)
Q Consensus 38 ~~~~~~~~~~~~~--~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~ 115 (549)
.|+.+++..++.+ + |+++|+++. ..+||+||+++++++|++|.+ .|+++|++|+++++|+++++++++||
T Consensus 4 ~~~~~~~~~~a~~~~~----pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~ 75 (705)
T PRK06060 4 GNLAGLLAEQASEAGW----YDRPAFYAA---DVVTHGQIHDGAARLGEVLRN-RGLSSGDRVLLCLPDSPDLVQLLLAC 75 (705)
T ss_pred cCHHHHHHHHHhhccC----CCceEEEec---CceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 3788888888775 5 999999864 479999999999999999999 89999999999999999999999999
Q ss_pred HHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEE
Q 008895 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVA 195 (549)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 195 (549)
+++|++++|++|.++.+++.+++++++++++|++......+.... .+ . ....................+++.+
T Consensus 76 ~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~--~---~~~~~~~~~~~~~~~~~~~~~~~~a 148 (705)
T PRK06060 76 LARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSR--VA--E---AAELMSEAARVAPGGYEPMGGDALA 148 (705)
T ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccc--cc--h---hhhhhhhccccCCCCCCCCCCCCeE
Confidence 999999999999999999999999999999999876555443211 11 0 1111110000001111223567899
Q ss_pred EEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEec-CcCHHHH
Q 008895 196 AIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMM 273 (549)
Q Consensus 196 ~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~ 273 (549)
+++|||||||.||+|.++|+++.+++.............++++...|++|.+++ ..++.++..|+++++.+ .+++..+
T Consensus 149 ~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~ 228 (705)
T PRK06060 149 YATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAA 228 (705)
T ss_pred EEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHH
Confidence 999999999999999999999988776543322145678899999999998887 56678899999998876 4788889
Q ss_pred HHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceeccc
Q 008895 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (549)
Q Consensus 274 ~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 353 (549)
...+.++++|+++++|+++..+++... ...++++|.+++|||++++++.+++.+.+++.++++.||+||++.......
T Consensus 229 ~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 306 (705)
T PRK06060 229 AILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNR 306 (705)
T ss_pred HHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEecc
Confidence 999999999999999999999887543 235789999999999999999999999998889999999999986554322
Q ss_pred CcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCe
Q 008895 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGF 433 (549)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 433 (549)
......+++|+|+++++++|+| +++++++.|+.|||+|+|++++.||+++++.+. ..++||+|||+|+++++|+
T Consensus 307 --~~~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~ 380 (705)
T PRK06060 307 --VDEWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGW 380 (705)
T ss_pred --CCCCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCce
Confidence 1223457899999999999999 568899999999999999999999999988653 3579999999999999999
Q ss_pred EEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcCCC
Q 008895 434 LFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNE---AEIMEFVARQVSP 510 (549)
Q Consensus 434 ~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~l~~~l~~ 510 (549)
+++.||+||+||++|++|+|.+||++|.+++.|.+++|++.++...++.+++|++.......+. ++++++++++|+.
T Consensus 381 l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~ 460 (705)
T PRK06060 381 VTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSA 460 (705)
T ss_pred EEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999998878889999998765543333 5788999999999
Q ss_pred CCcccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 511 YKKIRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 511 ~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
|++|..|+++++||+|++||++|++|++++.
T Consensus 461 ~~~P~~i~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 461 FKVPHRFAVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred CcCCcEEEEeecCCCCcchhhHHHHHHhhcc
Confidence 9999999999999999999999999998764
No 24
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6e-70 Score=584.97 Aligned_cols=492 Identities=22% Similarity=0.253 Sum_probs=398.0
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEE---CC--C--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALIN---SV--T--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~---~~--~--~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~ 109 (549)
..++.+++...++++ |+++|+.. .. . .+.+||+||.++++++|++|++ +|+++||+|+|+++|+++++
T Consensus 43 ~~tl~~~l~~~a~~~----p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~ 117 (651)
T PLN02736 43 IGTLHDNFVYAVETF----RDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-HGIPKGACVGLYFINRPEWL 117 (651)
T ss_pred CCCHHHHHHHHHHhC----CCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHH
Confidence 368999999999999 99999842 11 1 1469999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCe-EEEecCC--------------
Q 008895 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP-------------- 169 (549)
Q Consensus 110 v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~-------------- 169 (549)
++++||+++|++++|+++.++.+++.+++++++++++|++.+....+... ..+ ++.++..
T Consensus 118 ~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 197 (651)
T PLN02736 118 IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVE 197 (651)
T ss_pred HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcE
Confidence 99999999999999999999999999999999999999987765544321 112 2222211
Q ss_pred --chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHH
Q 008895 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (549)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 247 (549)
.++++....... ........++++++|+|||||||.||||++||+++++++......+ ...++|++++.+|++|.+
T Consensus 198 ~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~-~~~~~d~~l~~lPl~h~~ 275 (651)
T PLN02736 198 IVTYSKLLAQGRSS-PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLST-KFYPSDVHISYLPLAHIY 275 (651)
T ss_pred EEEHHHHHHhcccC-CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhcc-CCCCCCEEEEeCCHHHHH
Confidence 122222111100 1112234678999999999999999999999999998888777666 467789999999999999
Q ss_pred HHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC---------------------------
Q 008895 248 GLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--------------------------- 300 (549)
Q Consensus 248 g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--------------------------- 300 (549)
++...+.++..|+++++... ++..+++.|+++++|+++++|.++..+.+...
T Consensus 276 ~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (651)
T PLN02736 276 ERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALEN 354 (651)
T ss_pred HHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHc
Confidence 99888889999999888764 78899999999999999999999887754310
Q ss_pred --CCC------------CCC-CCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccc
Q 008895 301 --TDG------------YDL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTG 365 (549)
Q Consensus 301 --~~~------------~~l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G 365 (549)
... ..+ +++|.+++||+++++++.+++.+.+ ++.+++.||+||++..+.... ......+++|
T Consensus 355 ~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~--~~~~~~~~vG 431 (651)
T PLN02736 355 GKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGMD--EGDNLSGHVG 431 (651)
T ss_pred CCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheeccC--CCCCCCCccC
Confidence 000 001 4899999999999999999999888 688999999999987655432 2234568999
Q ss_pred cccCCcEEEEEcCCCCC---cCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCC
Q 008895 366 RLSAGLEAKIVDPETGD---SLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKD 442 (549)
Q Consensus 366 ~~~~~~~~~i~d~~~~~---~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d 442 (549)
+|+||++++|+|.+++. ...++..|||+|+||+++.|||++++.+...|..+|||+|||+|++|+||++++.||+||
T Consensus 432 ~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd 511 (651)
T PLN02736 432 SPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKN 511 (651)
T ss_pred CccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechh
Confidence 99999999999844332 223345799999999999999999999999998899999999999999999999999999
Q ss_pred eeee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC--------CCCHHHHHHHHH--------
Q 008895 443 LIKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS--------SLNEAEIMEFVA-------- 505 (549)
Q Consensus 443 ~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~--------~~~~~~i~~~l~-------- 505 (549)
+||+ +|++|+|.+||++|.+||.|.+|+|++. ..++.++++|++++.. ..+..++.++++
T Consensus 512 ~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 588 (651)
T PLN02736 512 IFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAV 588 (651)
T ss_pred heEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHH
Confidence 9998 7999999999999999999999999973 3467899999986421 122122222221
Q ss_pred ----------hcCCCCCcccEEEEeCccC------CCCCCcccHHHHHcccCc
Q 008895 506 ----------RQVSPYKKIRRVAFINAIP------KSAAGKILRMELRKVAVP 542 (549)
Q Consensus 506 ----------~~l~~~~~p~~i~~v~~lP------~t~~GKv~r~~l~~~~~~ 542 (549)
.+|+.|++|+.|+++++.| +|++||++|+++++.|.+
T Consensus 589 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~ 641 (651)
T PLN02736 589 LADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAK 641 (651)
T ss_pred HHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHH
Confidence 2699999999999998886 699999999999998753
No 25
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-69 Score=564.11 Aligned_cols=484 Identities=21% Similarity=0.331 Sum_probs=417.6
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
+++.+.|.+.++++ |+++|+++. +.++||.||.++++++|++|.+ .| .+|++|+|+++|+.++++++|||++
T Consensus 1 ~~~~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~~-~~~~~v~i~~~~~~~~~~~~la~~~ 72 (487)
T PRK07638 1 MGITKEYKKHASLQ----PNKIAIKEN--DRVLTYKDWFESVCKVANWLNE-KE-SKNKTIAILLENRIEFLQLFAGAAM 72 (487)
T ss_pred CChHHHHHHHHHhC----CCCeEEecC--CcEeeHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 46788899999999 999999987 7899999999999999999998 77 4899999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (549)
+|++++|+++.++.+++.++++.+++++++++......+......++.++ .+........ . .........++++++
T Consensus 73 ~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~~~~a~i 148 (487)
T PRK07638 73 AGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEID--EWKRMIEKYL-P-TYAPIENVQNAPFYM 148 (487)
T ss_pred cCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEeh--hhhhhhhhcc-c-cccccccCCCCcEEE
Confidence 99999999999999999999999999999999866554443333333332 2222221111 0 111112234668999
Q ss_pred EccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHH
Q 008895 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (549)
Q Consensus 198 ~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l 277 (549)
+|||||||.||+|+++|+++..++......+ ...++|+++...|++|..++...+.++..|+++++.+.+++..+++.+
T Consensus 149 ~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~i 227 (487)
T PRK07638 149 GFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-HMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDKL 227 (487)
T ss_pred EeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHHH
Confidence 9999999999999999999988887766655 467889999999999988888888899999999999889999999999
Q ss_pred HHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCC
Q 008895 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (549)
Q Consensus 278 ~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~ 357 (549)
+++++|+++++|+++..+.+... ...+.+.++++|++++.++.+++.+.+++..+++.||+||++.++.... ...
T Consensus 228 ~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~~~ 302 (487)
T PRK07638 228 ETENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVD-EES 302 (487)
T ss_pred HHcCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecc-ccc
Confidence 99999999999999999987632 2346667889999999999999999998999999999999987665533 223
Q ss_pred CCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEE
Q 008895 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIV 437 (549)
Q Consensus 358 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~ 437 (549)
....+++|+|++++.++|+| +++.+++.|+.|||+|+|+.++.||+++++.+...+ .+|||+|||+|++|++|++++.
T Consensus 303 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~ 380 (487)
T PRK07638 303 ERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIV 380 (487)
T ss_pred CCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEE
Confidence 34567899999999999999 678999999999999999999999999998776654 6899999999999999999999
Q ss_pred cccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEE
Q 008895 438 DRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRV 517 (549)
Q Consensus 438 GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i 517 (549)
||++|+||++|.+|+|.+||++|.++|+|.+++|++.+++..++.++++++. ..+.++++++++++++.+++|..+
T Consensus 381 GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~----~~~~~~l~~~~~~~l~~~~~p~~i 456 (487)
T PRK07638 381 GREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG----SATKQQLKSFCLQRLSSFKIPKEW 456 (487)
T ss_pred ecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEEC----CCCHHHHHHHHHHHhhcccCCcEE
Confidence 9999999999999999999999999999999999999988788888888863 357889999999999999999999
Q ss_pred EEeCccCCCCCCcccHHHHHcccCcCCC
Q 008895 518 AFINAIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 518 ~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
+++++||+|++||++|++|++++.+...
T Consensus 457 ~~v~~iP~t~~GKv~r~~L~~~~~~~~~ 484 (487)
T PRK07638 457 HFVDEIPYTNSGKIARMEAKSWIENQEK 484 (487)
T ss_pred EEecccCCCCcccccHHHHHHHHhcccc
Confidence 9999999999999999999999877653
No 26
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-69 Score=578.96 Aligned_cols=500 Identities=23% Similarity=0.325 Sum_probs=407.6
Q ss_pred CCCHH-HHHhhcccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHH
Q 008895 37 PISAV-DYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (549)
Q Consensus 37 ~~~~~-~~~~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~ 111 (549)
.+|+. +.+.++++.+ |+++|++.. ...+++||+||.++++++|++|++ .|+++||+|+++++|+++++++
T Consensus 51 ~~n~~~~~l~~~~~~~----p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~ 125 (629)
T PRK10524 51 RTNLCHNAVDRHLAKR----PEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-LGVQRGDRVLIYMPMIAEAAFA 125 (629)
T ss_pred EeeHHHHHHHHhhccC----CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHH
Confidence 36664 4555666677 999999863 124689999999999999999998 8999999999999999999999
Q ss_pred HHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH---------HHHh----c---CCCeEEEecCC------
Q 008895 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKLA----K---LKHRTILIDSP------ 169 (549)
Q Consensus 112 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~---~~~~~~~~~~~------ 169 (549)
++||+++|++++|++|.++.+++.+++++++++++|+++... +.+. . ....++.++..
T Consensus 126 ~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 205 (629)
T PRK10524 126 MLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMAR 205 (629)
T ss_pred HHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCc
Confidence 999999999999999999999999999999999999976421 1111 1 11234433321
Q ss_pred ------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecCh
Q 008895 170 ------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (549)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl 243 (549)
.+.++..... ..........++++++++|||||||.||+|+++|.+++..............+++++++.+|+
T Consensus 206 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 284 (629)
T PRK10524 206 VAGRDVDYATLRAQHL-GARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDI 284 (629)
T ss_pred ccCCcccHHHHHhcCC-CCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCC
Confidence 1111111100 001111224568899999999999999999999998865554433333356778999999999
Q ss_pred hhHHHH-HHHHHHhhhccEEEEec----CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEec
Q 008895 244 FHIYGL-FFCFRAAALMETAVVMQ----RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGA 316 (549)
Q Consensus 244 ~~~~g~-~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~G 316 (549)
.|..+. +.++.++..|+++++.. ..++..+++.|+++++|+++++|++++.+.+.... ...+++++|.+++||
T Consensus 285 ~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G 364 (629)
T PRK10524 285 GWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAG 364 (629)
T ss_pred CeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeC
Confidence 998876 56788899999998875 35789999999999999999999999988775432 344678999999999
Q ss_pred CCCCHHHHHHHHHhCCCCcEEcccCccccccceecccC--cCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEE
Q 008895 317 APLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG--PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSI 394 (549)
Q Consensus 317 e~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v 394 (549)
+++++++.+++.+.+ ++.+++.||+||++..+..... .......+++|.|++|++++|+|++++++++.|+.|||++
T Consensus 365 e~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i 443 (629)
T PRK10524 365 EPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVI 443 (629)
T ss_pred CCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEE
Confidence 999999999999988 7889999999999843332211 1123346789999999999999965899999999999999
Q ss_pred ecC---CcccccCCCccccccccC---CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcce
Q 008895 395 RGP---TIMKGYVGEPEVTSATLL---PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVAD 468 (549)
Q Consensus 395 ~g~---~~~~gy~~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~ 468 (549)
+|| +.+.||+++++.+...+. .++||+|||+|++|++|++++.||.||+||++|++|+|.+||++|.+||+|.+
T Consensus 444 ~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e 523 (629)
T PRK10524 444 EGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAE 523 (629)
T ss_pred cCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcce
Confidence 998 578899999877655432 46899999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCceeEEEEEeCCCCCCC--------HHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 469 AAVIPYPDEEAGQMPMAFVVRQPHSSLN--------EAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 469 ~~vv~~~~~~~~~~~~~~v~~~~~~~~~--------~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
++|++.++...++.+++|+++++....+ .++|+++++++|+.++.|..|+++++||+|++||++|+.|++++
T Consensus 524 ~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~ 603 (629)
T PRK10524 524 VAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIA 603 (629)
T ss_pred EEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHH
Confidence 9999999988889999999987653321 46899999999999999999999999999999999999999987
Q ss_pred CcC
Q 008895 541 VPS 543 (549)
Q Consensus 541 ~~~ 543 (549)
...
T Consensus 604 ~~~ 606 (629)
T PRK10524 604 EGR 606 (629)
T ss_pred cCC
Confidence 654
No 27
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-69 Score=562.36 Aligned_cols=491 Identities=27% Similarity=0.410 Sum_probs=424.6
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
+|+.+.+...++++ |+++|+++. ++.+||.||.+++.++|.+|.+ .|+.+|++|+++++|+.+++++++||++
T Consensus 2 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~ 74 (497)
T PRK06145 2 FNLSASIAFHARRT----PDRAALVYR--DQEISYAEFHQRILQAAGMLHA-RGIGQGDVVALLMKNSAAFLELAFAASY 74 (497)
T ss_pred ccHHHHHHHHHHHC----CCceEEEEC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 57889999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCc---hhhhhcccCCCccccccccCCCCE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPE---FDSMTMSWNSKHELDRAKVCQSDV 194 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 194 (549)
+|++++|+++.++.+.+.++++.+++++++++.+........ ...+.++... +..+... . ..........++++
T Consensus 75 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 151 (497)
T PRK06145 75 LGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALE-TPKIVIDAAAQADSRRLAQG-G-LEIPPQAAVAPTDL 151 (497)
T ss_pred cCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcc-cceEEecCcccchhHHHhcc-C-CCCCCCCCCCccce
Confidence 999999999999999999999999999999987765443211 1222232211 1111100 0 00111123466889
Q ss_pred EEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEecCcCHHHH
Q 008895 195 AAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMM 273 (549)
Q Consensus 195 a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~ 273 (549)
++++|||||||.||+|+++|+++..........+ +...+++++..+|++|.+++ ...+.++..|+++++.+.+++..+
T Consensus 152 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 230 (497)
T PRK06145 152 VRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-GLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAV 230 (497)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHH
Confidence 9999999999999999999999987665554444 46788899999999999888 445778889999999888999999
Q ss_pred HHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceeccc
Q 008895 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (549)
Q Consensus 274 ~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 353 (549)
++.++++++|++.++|+++..++.........++++|.+++||++++.++++.+.+.+++..+++.||+||++.......
T Consensus 231 ~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~ 310 (497)
T PRK06145 231 LAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLME 310 (497)
T ss_pred HHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceecc
Confidence 99999999999999999999999877655566789999999999999999999999998899999999999987655433
Q ss_pred CcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCe
Q 008895 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGF 433 (549)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 433 (549)
........+++|.|+++++++++| +++..++.|+.|||+++|++++.||+++++.+...| .++||+|||+|+++++|+
T Consensus 311 ~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~ 388 (497)
T PRK06145 311 AGREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGF 388 (497)
T ss_pred CccccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCc
Confidence 222333557899999999999999 567889999999999999999999999999998888 489999999999999999
Q ss_pred EEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCc
Q 008895 434 LFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKK 513 (549)
Q Consensus 434 ~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~ 513 (549)
++++||+||+||++|.+++|.+||++|.++|+|.+++|++.++...++.+++++++.+....+.+++.++++++|+++++
T Consensus 389 l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~ 468 (497)
T PRK06145 389 LYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQRLASFKV 468 (497)
T ss_pred EEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHHhhhcCCC
Confidence 99999999999999999999999999999999999999999988888899999998776667889999999999999999
Q ss_pred ccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 514 IRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 514 p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
|..++++++||+|++||++|++|++++.
T Consensus 469 p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 469 PRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred CCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 9999999999999999999999998764
No 28
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.4e-69 Score=570.04 Aligned_cols=493 Identities=26% Similarity=0.395 Sum_probs=415.4
Q ss_pred CCHHH-HHhhccc-CCCCCCCCCcEEEECC--CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHH
Q 008895 38 ISAVD-YVSSLRA-TLPWRDDDTVALINSV--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (549)
Q Consensus 38 ~~~~~-~~~~~~~-~~~~~~p~~~a~~~~~--~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~l 113 (549)
+|+.. .+.++++ .+ |+++|+++.. ..+++||+||.++++++|.+|.+ .|+++||+|+++++|++++++++|
T Consensus 42 ~~~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~l 116 (570)
T PRK04319 42 VNIAYEAIDRHADGGR----KDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-LGVEKGDRVFIFMPRIPELYFALL 116 (570)
T ss_pred eeHHHHHHHHhhccCC----CCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHH
Confidence 56664 5555555 45 8999998642 24689999999999999999998 999999999999999999999999
Q ss_pred HHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhc--C-CC-eEEEecCC--------chhhhhcccCCC
Q 008895 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK--L-KH-RTILIDSP--------EFDSMTMSWNSK 181 (549)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~-~~-~~~~~~~~--------~~~~~~~~~~~~ 181 (549)
||+++|++++|+++.++.+++.++++.+++++++++......... . .. .++.++.. .+.+.......
T Consensus 117 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 195 (570)
T PRK04319 117 GALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASD- 195 (570)
T ss_pred HHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCC-
Confidence 999999999999999999999999999999999998776543321 1 11 23333221 22222211110
Q ss_pred ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhcc
Q 008895 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALME 260 (549)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~ 260 (549)
........++++++++|||||||.||+|.++|++++.+.......+ ...+++++++..|++|.+|. ..++.++..|+
T Consensus 196 -~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~ 273 (570)
T PRK04319 196 -EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-DLHEDDVYWCTADPGWVTGTSYGIFAPWLNGA 273 (570)
T ss_pred -cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-CCCCCceEEecCChHHhhCchHHHHHHHhcCc
Confidence 1112234567899999999999999999999999988877666655 46778999999999998887 66788999999
Q ss_pred EEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC--CCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEE
Q 008895 261 TAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLV 337 (549)
Q Consensus 261 ~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~ 337 (549)
++++.. .+++..+++.|+++++|+++++|+++..+.+... ....+++++|.+++||+++++++.+++++.+ +..++
T Consensus 274 ~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~ 352 (570)
T PRK04319 274 TNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPIH 352 (570)
T ss_pred eEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCeE
Confidence 988875 5899999999999999999999999999987643 2344678999999999999999999999988 78899
Q ss_pred cccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEec--CCcccccCCCccccccccC
Q 008895 338 QAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG--PTIMKGYVGEPEVTSATLL 415 (549)
Q Consensus 338 ~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~~ 415 (549)
+.||+||++..+.... .......+++|+|+++++++|+| +++.+++.|+.|||+++| +.++.||+++++.+...|.
T Consensus 353 ~~YG~tE~~~~~~~~~-~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~ 430 (570)
T PRK04319 353 DNWWMTETGGIMIANY-PAMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFA 430 (570)
T ss_pred eceeecccCCEEEecC-CCCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhc
Confidence 9999999987654422 22234567899999999999999 667788999999999997 8999999999999988885
Q ss_pred CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCC
Q 008895 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSL 495 (549)
Q Consensus 416 ~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 495 (549)
+|||+|||+|+++++|++++.||++|+|+.+|++|+|.+||++|.++|.|.+++|++.++...++.++++++..++...
T Consensus 431 -~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~ 509 (570)
T PRK04319 431 -GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEP 509 (570)
T ss_pred -CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999998889999999998765443
Q ss_pred CH---HHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 496 NE---AEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 496 ~~---~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+. ++|.++++++|+.|++|+.|+++++||+|++||++|++|++++.+
T Consensus 510 ~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~ 559 (570)
T PRK04319 510 SEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELG 559 (570)
T ss_pred CHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhC
Confidence 32 689999999999999999999999999999999999999998643
No 29
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2.8e-68 Score=561.06 Aligned_cols=490 Identities=27% Similarity=0.384 Sum_probs=423.4
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+++.+.++.+ |+++|+++. ++.+||.||.+++.++|..|.+ .|+++|++|+++++|++++++++|||++
T Consensus 21 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~-~gi~~g~~V~v~~~n~~~~~~~~lA~~~ 93 (542)
T PRK06155 21 RTLPAMLARQAERY----PDRPLLVFG--GTRWTYAEAARAAAAAAHALAA-AGVKRGDRVALMCGNRIEFLDVFLGCAW 93 (542)
T ss_pred cCHHHHHHHHHHHC----CCCeEEEeC--CccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 78999999999999 999999987 7899999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCC------CeEEEecCCc-------hhhhhcccCCCccc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK------HRTILIDSPE-------FDSMTMSWNSKHEL 184 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------~~~~~~~~~~-------~~~~~~~~~~~~~~ 184 (549)
+|++++|+++.++.+++.++++++++++++++.+....+.... ...+.++... +........ ....
T Consensus 94 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 172 (542)
T PRK06155 94 LGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPL-DAPA 172 (542)
T ss_pred hCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhccc-CCCC
Confidence 9999999999999999999999999999999987766554321 1233333211 000000000 0011
Q ss_pred cccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEE
Q 008895 185 DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVV 264 (549)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~ 264 (549)
......++++++++|||||||.||+|.++|+++..........+ ...+.+++++.+|++|.+++...+.++..|+++++
T Consensus 173 ~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~ 251 (542)
T PRK06155 173 PAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-EIGADDVLYTTLPLFHTNALNAFFQALLAGATYVL 251 (542)
T ss_pred CCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-CCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEe
Confidence 11234568899999999999999999999999987776655555 46788999999999999999878999999999999
Q ss_pred ecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccc
Q 008895 265 MQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTE 344 (549)
Q Consensus 265 ~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE 344 (549)
...+++..+++.|+++++|+++++|+++..+.+.........+++|.++.|| +++.+.+.+.+.+ ++.+++.||+||
T Consensus 252 ~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE 328 (542)
T PRK06155 252 EPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTE 328 (542)
T ss_pred eCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccc
Confidence 9889999999999999999999999999999887766666678898877655 5789999999988 789999999999
Q ss_pred cccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecC---CcccccCCCccccccccCCCCeee
Q 008895 345 STAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP---TIMKGYVGEPEVTSATLLPDGWMR 421 (549)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---~~~~gy~~~~~~~~~~~~~~~~~~ 421 (549)
++..+.... .....+++|.+.+++.++|+| +++++++.|+.|||+++|+ +++.||+++++.+...| .++||+
T Consensus 329 ~~~~~~~~~---~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~~~ 403 (542)
T PRK06155 329 TNFVIAVTH---GSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNLWFH 403 (542)
T ss_pred cCccccCCC---CCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCCcEe
Confidence 987655421 233567899999999999999 5689999999999999998 69999999999888877 589999
Q ss_pred cCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHH
Q 008895 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIM 501 (549)
Q Consensus 422 TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~ 501 (549)
|||+|+++++|++++.||.+|+++++|.+|+|.+||++|.++|+|.+++|+++++...++.+.++++...+...+..+++
T Consensus 404 TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~ 483 (542)
T PRK06155 404 TGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPVALV 483 (542)
T ss_pred ccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988778888888888777777889999
Q ss_pred HHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 502 EFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 502 ~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
++++++|+.+++|..|+++++||+|++||++|++|++++.+..
T Consensus 484 ~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~ 526 (542)
T PRK06155 484 RHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGVTAD 526 (542)
T ss_pred HHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhccCCc
Confidence 9999999999999999999999999999999999999876543
No 30
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-68 Score=569.03 Aligned_cols=496 Identities=30% Similarity=0.494 Sum_probs=423.9
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.+.+.++++ |+++|+.+. ++.+||.||.++++++|+.|.+ +|+++||+|+++++|+++++++++||++
T Consensus 32 ~~l~~~~~~~~~~~----p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~~~ 104 (573)
T PRK05605 32 TTLVDLYDNAVARF----GDRPALDFF--GATTTYAELGKQVRRAAAGLRA-LGVRPGDRVAIVLPNCPQHIVAFYAVLR 104 (573)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68999999999999 999999986 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCe-EEEecC------------------------
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDS------------------------ 168 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~------------------------ 168 (549)
+|++++|++|.++.+++.+++.+++++++|+++.....+.+. ... ++.++.
T Consensus 105 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
T PRK05605 105 LGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARA 184 (573)
T ss_pred cCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccc
Confidence 999999999999999999999999999999987755443221 111 111110
Q ss_pred ---------CchhhhhcccCCC--ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCC-CCCCcE
Q 008895 169 ---------PEFDSMTMSWNSK--HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAV 236 (549)
Q Consensus 169 ---------~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~ 236 (549)
..|.++....... .........++++++++|||||||.||+|.++|+++..+.......+.. ...+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~ 264 (573)
T PRK05605 185 ALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPER 264 (573)
T ss_pred ccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcE
Confidence 0111111110000 0011122456889999999999999999999999998877654443321 234689
Q ss_pred EEEecChhhHHHH-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEe
Q 008895 237 MLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACG 315 (549)
Q Consensus 237 ~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~ 315 (549)
+++.+|++|.+|+ ...+.++..|+++++.+.+++..+++.|+++++|++.++|+++..+++........++++|.+++|
T Consensus 265 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~g 344 (573)
T PRK05605 265 VLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSG 344 (573)
T ss_pred EEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEEC
Confidence 9999999999988 456677889999999888899999999999999999999999999998776667778999999999
Q ss_pred cCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCC-CCcCCCCCcceEEE
Q 008895 316 AAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPET-GDSLPPGKEGELSI 394 (549)
Q Consensus 316 Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~Gel~v 394 (549)
|+++++++.+.+.+.+ +..+++.||+||++.++..... ......+++|.|++++.++|+|+++ +.+++.|+.|||++
T Consensus 345 g~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v 422 (573)
T PRK05605 345 AMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPM-SDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLV 422 (573)
T ss_pred CCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCc-ccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEE
Confidence 9999999999999887 7889999999999876654322 2223457899999999999999776 68899999999999
Q ss_pred ecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEee
Q 008895 395 RGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPY 474 (549)
Q Consensus 395 ~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~ 474 (549)
+|+.++.||+++++.+...|. +|||+|||+|+++++|++++.||+||+++.+|++|+|.+||++|..++.|.+++|++.
T Consensus 423 ~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~~ 501 (573)
T PRK05605 423 RGPQVFKGYWNRPEETAKSFL-DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVGL 501 (573)
T ss_pred ecCchhhhhcCChhHhhhccc-CCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEee
Confidence 999999999999999988884 6799999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 475 PDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 475 ~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
++...++.+++++++.++...+.+++.++++++|+.+++|..++++++||+|.+||++|++|++++.+.
T Consensus 502 ~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 570 (573)
T PRK05605 502 PREDGSEEVVAAVVLEPGAALDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREELLEK 570 (573)
T ss_pred ecccCCeEEEEEEEECCCCCCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHHHHH
Confidence 888888899999998877667889999999999999999999999999999999999999999988543
No 31
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-69 Score=579.61 Aligned_cols=494 Identities=24% Similarity=0.343 Sum_probs=404.1
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~ 109 (549)
..|+.+.+.+.++++ |+++|+++.. ..+.+||+||.++++++|++|++ . +++||+|+++++|+++++
T Consensus 20 ~~~l~~~l~~~a~~~----~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~-~~~gd~V~i~~~n~~e~~ 93 (631)
T PRK07769 20 NTNLVRHVERWAKVR----GDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ-V-TKPGDRVAILAPQNLDYL 93 (631)
T ss_pred cCCHHHHHHHHHHhC----CCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEEcCCChHHH
Confidence 368999999999988 9999998631 12589999999999999999998 5 899999999999999999
Q ss_pred HHHHHHHHcCCeEccC-CCCCC--HHHHHHHHhhcCCeEEEEcCccHHHHhcC----C----CeEEEecCCchhhhhccc
Q 008895 110 ILYFSLLSLGVIISPA-NPVNT--ESEISRQIQLSNPVIAFATSSVVHKLAKL----K----HRTILIDSPEFDSMTMSW 178 (549)
Q Consensus 110 v~~la~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~ 178 (549)
+++|||+++|++++|+ ++..+ .+++.+++++++++++|+++...+.+.+. . ..++.++.. .+. .
T Consensus 94 ~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~ 168 (631)
T PRK07769 94 IAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAV--PDE---V 168 (631)
T ss_pred HHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcccc--ccc---c
Confidence 9999999999999999 55554 68899999999999999988765543221 1 122222210 000 0
Q ss_pred CCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhh
Q 008895 179 NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAAL 258 (549)
Q Consensus 179 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~ 258 (549)
. . ........++++++++|||||||.||+|+++|+++.+........+ ....+++++..+|++|.+|+...+.+++.
T Consensus 169 ~-~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~ 245 (631)
T PRK07769 169 G-A-TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-EGQEGDRGVSWLPFFHDMGLITVLLPALL 245 (631)
T ss_pred c-c-ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-CCCCcceEEEeCCCcCchhhHHHHHHHhh
Confidence 0 0 1111234568999999999999999999999999988877666555 45678899999999999999777778888
Q ss_pred ccEEEEecC--c--CHHHHHHHHHHhce---eeeeecHHHHHHHHhC---CC--CCCCCCCCceEEEEecCCCCHHHHHH
Q 008895 259 METAVVMQR--F--DLKMMLKAVEEFRV---THAAVTPPIVVAMSKG---GS--TDGYDLSSLETVACGAAPLGKDTIMA 326 (549)
Q Consensus 259 g~~~~~~~~--~--~~~~~~~~l~~~~~---t~l~~~P~~l~~l~~~---~~--~~~~~l~~lr~v~~~Ge~l~~~~~~~ 326 (549)
|+++++..+ + ++..+++.+.++++ +++..+|+++..++.. .. ....+++++|.+++||+++++++.++
T Consensus 246 G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~ 325 (631)
T PRK07769 246 GHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRK 325 (631)
T ss_pred CCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHH
Confidence 999888753 3 88999999999886 7889999987766543 11 11346889999999999999999999
Q ss_pred HHHhCC-----CCcEEcccCccccccceecccCcCC-------------------------CCCCCccccccCCcEEEEE
Q 008895 327 FASKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-------------------------CRRWGSTGRLSAGLEAKIV 376 (549)
Q Consensus 327 ~~~~~~-----~~~l~~~yG~tE~~~~~~~~~~~~~-------------------------~~~~~~~G~~~~~~~~~i~ 376 (549)
|.+.|+ ...+++.||+||++..+........ .....++|+|.++.+++|+
T Consensus 326 ~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~iv 405 (631)
T PRK07769 326 FNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIV 405 (631)
T ss_pred HHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEE
Confidence 999873 2458999999998765554221110 0112478999999999999
Q ss_pred cCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC-----------------CCeeecCceEEEecCCeEEEEcc
Q 008895 377 DPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-----------------DGWMRTGDLCYIDEDGFLFIVDR 439 (549)
Q Consensus 377 d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-----------------~~~~~TGD~~~~~~~g~~~~~GR 439 (549)
|++++++++.|+.|||+|+|++++.|||++++.+.+.|.. +|||+|||+|+++ +|+++++||
T Consensus 406 d~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR 484 (631)
T PRK07769 406 DPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGR 484 (631)
T ss_pred cCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcc
Confidence 9888999999999999999999999999999999888742 4899999999995 999999999
Q ss_pred cCCeeeeCcEeeChHHHHHHHHc-CCCcce--EEEEeecC-------------------CCCCceeEEEEEeCCCC-CCC
Q 008895 440 LKDLIKYKGYQVAPAELEHLLLS-HREVAD--AAVIPYPD-------------------EEAGQMPMAFVVRQPHS-SLN 496 (549)
Q Consensus 440 ~~d~i~~~G~~v~~~~IE~~l~~-~~~v~~--~~vv~~~~-------------------~~~~~~~~~~v~~~~~~-~~~ 496 (549)
+||+||++|++|+|.|||++|.+ ||.|.+ ++|+++++ +..++.++++|++.++. ..+
T Consensus 485 ~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~~~ 564 (631)
T PRK07769 485 VKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHKLD 564 (631)
T ss_pred cccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCcccccc
Confidence 99999999999999999999986 899998 89999888 45778899999987653 567
Q ss_pred HHHHHHHHHhcCCC-CC-cccEEEEeC--ccCCCCCCcccHHHHHcccCcCCC
Q 008895 497 EAEIMEFVARQVSP-YK-KIRRVAFIN--AIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 497 ~~~i~~~l~~~l~~-~~-~p~~i~~v~--~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
.++|.++++++|.. ++ .|+.+.+++ +||+|++|||+|++|++++.++.+
T Consensus 565 ~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~~ 617 (631)
T PRK07769 565 PQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGSL 617 (631)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCCC
Confidence 89999999999995 56 488888886 799999999999999999987765
No 32
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-68 Score=562.90 Aligned_cols=491 Identities=30% Similarity=0.471 Sum_probs=428.1
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|...+..+ |+++|+.+. ++++||+||++++.++|+.|.+ .|+++|++|+++++|+++++++++||++
T Consensus 5 ~~i~~~l~~~~~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~g~~V~l~~~~~~~~~~~~la~~~ 77 (513)
T PRK07656 5 MTLPELLARAARRF----GDKEAYVFG--DQRLTYAELNARVRRAAAALAA-LGIGKGDRVAIWAPNSPHWVIAALGALK 77 (513)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEeC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 68999999999999 999999997 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCe-EEEecC----------CchhhhhcccCCC
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDS----------PEFDSMTMSWNSK 181 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~----------~~~~~~~~~~~~~ 181 (549)
+|++++|+++..+.+.+..++++++++++++++......... ... .+.... ..|.++......
T Consensus 78 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (513)
T PRK07656 78 AGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDP- 156 (513)
T ss_pred cCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCC-
Confidence 999999999999999999999999999999988765543321 111 222221 122333222111
Q ss_pred ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhcc
Q 008895 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALME 260 (549)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~ 260 (549)
........++++++++|||||||.||+|.++|.++..........+ ...+.+++++.+|++|.+++ ..++.++..|+
T Consensus 157 -~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (513)
T PRK07656 157 -AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGA 234 (513)
T ss_pred -CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-CCCCCCeEEEccchHHHHHHHHHHHHHHHcCc
Confidence 1122235678899999999999999999999999988887766666 46788999999999999998 45788899999
Q ss_pred EEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEccc
Q 008895 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (549)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~y 340 (549)
++++...+++..+++.|+++++|+++++|+++..+++........++++|.+++||+++++++.+.+.+.++...+++.|
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~Y 314 (513)
T PRK07656 235 TILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGY 314 (513)
T ss_pred eEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEE
Confidence 99998888999999999999999999999999999998776666789999999999999999999999999433899999
Q ss_pred CccccccceecccCcCC-CCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCe
Q 008895 341 GLTESTAGVFRTVGPDE-CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGW 419 (549)
Q Consensus 341 G~tE~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 419 (549)
|+||+|+++..+..... ....+++|.|+++++++|+| +++++++.|+.|||+++|+.++.||++++..+...+..++|
T Consensus 315 G~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 393 (513)
T PRK07656 315 GLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGW 393 (513)
T ss_pred ccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCc
Confidence 99999877665432221 12257899999999999999 66899999999999999999999999999988888866899
Q ss_pred eecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHH
Q 008895 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAE 499 (549)
Q Consensus 420 ~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~ 499 (549)
|+|||+|+++++|.+++.||.+|+++++|.++++.+||++|.++++|.+++|++.++...++.++++++.++....+.++
T Consensus 394 ~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~ 473 (513)
T PRK07656 394 LHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTEEE 473 (513)
T ss_pred eeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888999999987666678899
Q ss_pred HHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcc
Q 008895 500 IMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 539 (549)
Q Consensus 500 i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~ 539 (549)
+.++++++|+++++|..++++++||+|++||++|++|+++
T Consensus 474 l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~~ 513 (513)
T PRK07656 474 LIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALREK 513 (513)
T ss_pred HHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhcC
Confidence 9999999999999999999999999999999999999864
No 33
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-68 Score=575.59 Aligned_cols=497 Identities=20% Similarity=0.214 Sum_probs=403.5
Q ss_pred CCCCHHHHHhhcccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHH
Q 008895 36 APISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (549)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~ 112 (549)
..+|+.+.+.++ .+ |+++|++.... .+++||+||.++++++|+.|++ .|+++||+|+++++|++++++++
T Consensus 84 ~~~n~~~~~~~~--~~----~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~v~~~ 156 (655)
T PRK03584 84 ARLNYAENLLRH--RR----DDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-LGVGPGDRVAAYLPNIPETVVAM 156 (655)
T ss_pred CEeeHHHHhhcc--CC----CCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHH
Confidence 347888877764 45 89999986421 2689999999999999999998 89999999999999999999999
Q ss_pred HHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH---------HHH----hcCC--CeEEEecC---------
Q 008895 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AKLK--HRTILIDS--------- 168 (549)
Q Consensus 113 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~----~~~~--~~~~~~~~--------- 168 (549)
|||+++|++++|++|.++.+++.+++++++++++|+++... ..+ .... ..++.++.
T Consensus 157 lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 236 (655)
T PRK03584 157 LATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAA 236 (655)
T ss_pred HHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccc
Confidence 99999999999999999999999999999999999986532 111 1111 12333321
Q ss_pred ----CchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHH-HHHhhccCCCCCCCcEEEEecCh
Q 008895 169 ----PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA-VASSFASSPKRVSPAVMLFTMPY 243 (549)
Q Consensus 169 ----~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~~pl 243 (549)
..|.++..... ...........+++++|+|||||||.||||+++|++++.+ .......+ ...++|++++..++
T Consensus 237 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~ 314 (655)
T PRK03584 237 LPGALLWEDFLAPAE-AAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-DLGPGDRFFWYTTC 314 (655)
T ss_pred cCCcccHHHHhhccc-cCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-CCCCCCEEEEcCCc
Confidence 11223222111 1011123345689999999999999999999999987644 33333334 46778999998888
Q ss_pred hhHHHHHHHHHHhhhccEEEEecC----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC--CCCCCCCCceEEEEecC
Q 008895 244 FHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAA 317 (549)
Q Consensus 244 ~~~~g~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~~Ge 317 (549)
.|..+ ...+.++..|+++++.+. +++..+++.++++++|++.++|+++..+.+... ....++++||.+++||+
T Consensus 315 ~~~~~-~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge 393 (655)
T PRK03584 315 GWMMW-NWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGS 393 (655)
T ss_pred hHHhH-HHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecC
Confidence 88754 345688999999998752 588999999999999999999999998876432 23356889999999999
Q ss_pred CCCHHHHHHHHHhC-CCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEec
Q 008895 318 PLGKDTIMAFASKF-PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG 396 (549)
Q Consensus 318 ~l~~~~~~~~~~~~-~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g 396 (549)
++++++.+++.+.+ +++.+.+.||+||++...... ........+++|.|.+|++++|+| ++++++ .|+.|||+|+|
T Consensus 394 ~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~-~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~g 470 (655)
T PRK03584 394 PLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGG-NPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCTK 470 (655)
T ss_pred CCCHHHHHHHHHHhCCCceEEeccChHhhhcccccC-CCCCCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEcc
Confidence 99999999999988 468899999999986543321 122234568899999999999999 667777 79999999999
Q ss_pred C--CcccccCCCccccc--cccC--CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEE
Q 008895 397 P--TIMKGYVGEPEVTS--ATLL--PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAA 470 (549)
Q Consensus 397 ~--~~~~gy~~~~~~~~--~~~~--~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~ 470 (549)
+ +++.||+++++.++ ..+. .+|||+|||+|++|+||++++.||+||+||++|++|+|.|||++|.+||+|.+|+
T Consensus 471 p~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~ 550 (655)
T PRK03584 471 PFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSL 550 (655)
T ss_pred CCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEE
Confidence 6 78999999987543 1111 1578999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCC
Q 008895 471 VIPYPDEEAGQMPMAFVVRQPHSSLNE---AEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 471 vv~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
|++.+++..++.+++||+++++...+. ++|.++++++|+++++|..|+++++||+|++|||+|+.||+++.....
T Consensus 551 vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~ 628 (655)
T PRK03584 551 VIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPV 628 (655)
T ss_pred EEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCC
Confidence 999999888899999999887654443 689999999999999999999999999999999999999999876554
No 34
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.9e-69 Score=571.34 Aligned_cols=491 Identities=22% Similarity=0.328 Sum_probs=399.7
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCC--------ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTG--------LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~--------~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~ 109 (549)
+|+.+.+.+.++++ |+++|+++...+ +++||+||.++++++|++|.+ .|+++||+|+++++|+.+++
T Consensus 6 ~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-~g~~~gd~V~~~~~n~~~~~ 80 (552)
T PRK09274 6 ANIARHLPRAAQER----PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-AGIGRGMRAVLMVTPSLEFF 80 (552)
T ss_pred hhHHHHHHHHHHhC----CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCcHHHH
Confidence 78999999999988 999999875221 289999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC--ccHHHHhcC---CC-eEEEecC------Cchhhhhcc
Q 008895 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS--SVVHKLAKL---KH-RTILIDS------PEFDSMTMS 177 (549)
Q Consensus 110 v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~--~~~~~~~~~---~~-~~~~~~~------~~~~~~~~~ 177 (549)
++++||+++|++++|++|.++.+++.+++++++++++|+++ .....+... .. ..+.++. ..+.++...
T Consensus 81 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 160 (552)
T PRK09274 81 ALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRD 160 (552)
T ss_pred HHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhccc
Confidence 99999999999999999999999999999999999999875 222222111 01 1222221 122222211
Q ss_pred cCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhh
Q 008895 178 WNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAA 257 (549)
Q Consensus 178 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~ 257 (549)
.... ........++++++++|||||||.||+|.++|+++...+......+ ...+.++.+..+|++|.+++ .
T Consensus 161 ~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~pl~~~~~~-------~ 231 (552)
T PRK09274 161 GAAA-PFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-GIEPGEIDLPTFPLFALFGP-------A 231 (552)
T ss_pred Cccc-cCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-CCCCCceeeeccCHHHhhhh-------h
Confidence 1100 1112234568899999999999999999999999998887766665 46778899999999876543 3
Q ss_pred hccEEEEec-------CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHh
Q 008895 258 LMETAVVMQ-------RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASK 330 (549)
Q Consensus 258 ~g~~~~~~~-------~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~ 330 (549)
.|.++++.. .+++..+++.|+++++|+++++|+++..|++.......+++++|.+++||+++++++.+++.+.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~ 311 (552)
T PRK09274 232 LGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAM 311 (552)
T ss_pred hCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHH
Confidence 466666643 3678999999999999999999999999988766556678999999999999999999999999
Q ss_pred CC-CCcEEcccCccccccceecccCc------C--CCCCCCccccccCCcEEEEEcCC--------CCCcCCCCCcceEE
Q 008895 331 FP-KVVLVQAYGLTESTAGVFRTVGP------D--ECRRWGSTGRLSAGLEAKIVDPE--------TGDSLPPGKEGELS 393 (549)
Q Consensus 331 ~~-~~~l~~~yG~tE~~~~~~~~~~~------~--~~~~~~~~G~~~~~~~~~i~d~~--------~~~~~~~g~~Gel~ 393 (549)
++ ++++++.||+||++.++...... . ......++|+|+++++++|+|++ ++++++.|+.|||+
T Consensus 312 ~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~ 391 (552)
T PRK09274 312 LPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIV 391 (552)
T ss_pred cCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEE
Confidence 96 47999999999998765432211 0 11122378999999999999853 46789999999999
Q ss_pred EecCCcccccCCCccccccccC--CCC--eeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceE
Q 008895 394 IRGPTIMKGYVGEPEVTSATLL--PDG--WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADA 469 (549)
Q Consensus 394 v~g~~~~~gy~~~~~~~~~~~~--~~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~ 469 (549)
|+|++++.||+++++.+...|. .+| ||+|||+|++|++|++++.||.||+||++|++|+|.+||++|.+||+|.+|
T Consensus 392 v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~ 471 (552)
T PRK09274 392 VAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRS 471 (552)
T ss_pred EecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCccccee
Confidence 9999999999999998887663 356 999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCC---CCcccEEEEeCccCCC--CCCcccHHHHHcccCcC
Q 008895 470 AVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSP---YKKIRRVAFINAIPKS--AAGKILRMELRKVAVPS 543 (549)
Q Consensus 470 ~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~---~~~p~~i~~v~~lP~t--~~GKv~r~~l~~~~~~~ 543 (549)
+|+++++. .++.++++|+..++...+.+++.+.+++.+.. ++.|..++++++||+| ++|||+|++|++++.++
T Consensus 472 ~v~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 472 ALVGVGVP-GAQRPVLCVELEPGVACSKSALYQELRALAAAHPHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAKQ 549 (552)
T ss_pred EEEEeCCC-CCceEEEEEEccCccccchHHHhhhhHHHHHhcCCCcceeEEeccCCCCccccccccccHHHHHHHHHHh
Confidence 99999875 45678889888776555666677766665554 4567789999999999 79999999999987653
No 35
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-68 Score=562.24 Aligned_cols=498 Identities=27% Similarity=0.427 Sum_probs=428.7
Q ss_pred CCCCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHH
Q 008895 34 EDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (549)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~l 113 (549)
....+|+.+.+...+..+ |+++|+.+. ++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++
T Consensus 13 ~~~~~n~~~~~~~~a~~~----~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~~ 85 (542)
T PRK07786 13 LARRQNWVNQLARHALMQ----PDAPALRFL--GNTTTWRELDDRVAALAGALSR-RGVGFGDRVLILMLNRTEFVESVL 85 (542)
T ss_pred cccccCHHHHHHHHHHHC----CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHH
Confidence 345689999999999999 999999987 7899999999999999999998 899999999999999999999999
Q ss_pred HHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCe-EEEecC------CchhhhhcccCCC
Q 008895 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDS------PEFDSMTMSWNSK 181 (549)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~------~~~~~~~~~~~~~ 181 (549)
||+++|++++|+++..+.+++..+++.+++++++++......+... ... ++.++. ..+.++......
T Consensus 86 a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 164 (542)
T PRK07786 86 AANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGP- 164 (542)
T ss_pred HHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCC-
Confidence 9999999999999999999999999999999999998766544321 111 222221 123333221111
Q ss_pred ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccE
Q 008895 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMET 261 (549)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~ 261 (549)
.........+++++++|||||||.||+|.++|+++...+......+.....++++++.+|++|.+|+...+.++..|++
T Consensus 165 -~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~ 243 (542)
T PRK07786 165 -AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAP 243 (542)
T ss_pred -CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCE
Confidence 1112234457899999999999999999999999998887766666333567899999999999999888899999999
Q ss_pred EEEec--CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 262 AVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 262 ~~~~~--~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
+++.+ .+++..+++.++++++|.++++|+++..++......... .++|.+++||+++++++++.+.+.+++..+++.
T Consensus 244 ~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~ 322 (542)
T PRK07786 244 TVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAA 322 (542)
T ss_pred EEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEee
Confidence 98864 578999999999999999999999999998876543333 479999999999999999999999989999999
Q ss_pred cCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCe
Q 008895 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGW 419 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 419 (549)
||+||++.+.............+++|+|++++.++|+| ++++.++.|+.|||+++|+.++.||+++++.+...| .++|
T Consensus 323 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~ 400 (542)
T PRK07786 323 FGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF-AGGW 400 (542)
T ss_pred ecccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh-hCCc
Confidence 99999987765543333334567899999999999999 678899999999999999999999999999998888 5899
Q ss_pred eecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC-CCCHH
Q 008895 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS-SLNEA 498 (549)
Q Consensus 420 ~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~-~~~~~ 498 (549)
|+|||+++++++|.+++.||.+|+|+++|.+|++.+||++|.++|.|.+++|++.++...++.++++++..... ....+
T Consensus 401 ~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 480 (542)
T PRK07786 401 FHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAALTLE 480 (542)
T ss_pred ccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999998877788888888876543 35678
Q ss_pred HHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 499 EIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 499 ~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
++.++++++++++++|..++++++||+|++||++|++|++++.+.
T Consensus 481 ~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 525 (542)
T PRK07786 481 DLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGAC 525 (542)
T ss_pred HHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999998654
No 36
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-68 Score=564.48 Aligned_cols=495 Identities=24% Similarity=0.368 Sum_probs=412.0
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
-++.+.+.+.++++ |+++|+++....+.+||.||.++++++|++|.+ .|+++||+|+++++|+.++++++|||++
T Consensus 16 ~~l~~~l~~~a~~~----p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~ 90 (534)
T PRK05852 16 PRIADLVEVAATRL----PEAPALVVTADRIAISYRDLARLVDDLAGQLTR-SGLLPGDRVALRMGSNAEFVVALLAASR 90 (534)
T ss_pred ccHHHHHHHHHHhC----CCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 47999999999999 999999876445689999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC--C-C-eEEEecCCc------hhhhhcc-cCCCccccc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL--K-H-RTILIDSPE------FDSMTMS-WNSKHELDR 186 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~-~-~~~~~~~~~------~~~~~~~-~~~~~~~~~ 186 (549)
+|++++|++|.++.+.+.++++.++++++|++.......... . . ..+.+.... +...... .........
T Consensus 91 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (534)
T PRK05852 91 ADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPTPATST 170 (534)
T ss_pred cCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccCCCccccc
Confidence 999999999999999999999999999999876533221110 0 0 011111100 0000000 000000011
Q ss_pred cccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEe
Q 008895 187 AKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVM 265 (549)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~ 265 (549)
.....++.++++|||||||.||+|.++|+++..++......+ ....+|++++.+|++|.+++ ..++.++..|+++++.
T Consensus 171 ~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 249 (534)
T PRK05852 171 PEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLP 249 (534)
T ss_pred cCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeC
Confidence 112246789999999999999999999999998888777666 46788999999999999998 4567778888887775
Q ss_pred c--CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCC--CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccC
Q 008895 266 Q--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--GYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (549)
Q Consensus 266 ~--~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~--~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG 341 (549)
. .+++..+++.|+++++|+++++|+++..+.+..... ...++++|.++++|+++++++++.+.+.+ +..+++.||
T Consensus 250 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG 328 (534)
T PRK05852 250 ARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFG 328 (534)
T ss_pred CCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccC
Confidence 4 478899999999999999999999999998765432 33578999999999999999999999998 788999999
Q ss_pred ccccccceecccCc------CCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccC
Q 008895 342 LTESTAGVFRTVGP------DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLL 415 (549)
Q Consensus 342 ~tE~~~~~~~~~~~------~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~ 415 (549)
+||++..+...... ......+..|. .+|++++++| ++++++++|+.|||+|+|+.++.||+++++.+...|
T Consensus 329 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~- 405 (534)
T PRK05852 329 MTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF- 405 (534)
T ss_pred ccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCcccchhhh-
Confidence 99998765532211 01112233444 6999999999 567899999999999999999999999999998888
Q ss_pred CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCC
Q 008895 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSL 495 (549)
Q Consensus 416 ~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 495 (549)
.+|||+|||+|++|++|++++.||++|+++.+|.+|+|.+||++|.++|+|.+++|++.++...++.++++++..+....
T Consensus 406 ~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~ 485 (534)
T PRK05852 406 TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPP 485 (534)
T ss_pred cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999988888999999998766667
Q ss_pred CHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 496 NEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 496 ~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+.+++.++++++|+.+++|..|+++++||+|++||++|++|++++.+
T Consensus 486 ~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 486 TAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred CHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 88999999999999999999999999999999999999999998864
No 37
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-68 Score=557.87 Aligned_cols=481 Identities=29% Similarity=0.436 Sum_probs=418.5
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
+++++.|.+++.++ |+++|+.+. ++.+||.||.++++++|++|.+ .|+.+|++|+++++|+.++++++|||++
T Consensus 2 ~~~~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~ 74 (483)
T PRK03640 2 ETMPNWLKQRAFLT----PDRTAIEFE--EKKVTFMELHEAVVSVAGKLAA-LGVKKGDRVALLMKNGMEMILVIHALQQ 74 (483)
T ss_pred CcHHHHHHHHHHhC----CCceEEEeC--CeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (549)
+|++++|+++..+.+++..++++++++++++++.......... . ..+.++....... ........+++++++
T Consensus 75 ~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~-~------~~~~~~~~~~~~~-~~~~~~~~~~~~a~i 146 (483)
T PRK03640 75 LGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI-S------VKFAELMNGPKEE-AEIQEEFDLDEVATI 146 (483)
T ss_pred CCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc-c------ccHHHHhhccccc-CCCCCCCCCCCeEEE
Confidence 9999999999999999999999999999999876655433211 0 0133322221111 111223456889999
Q ss_pred EccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHH
Q 008895 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (549)
Q Consensus 198 ~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l 277 (549)
+|||||||.||+|.++|.++...+......+ +....++++..+|++|.+++...+.++..|+++++.+.+++..+++.+
T Consensus 147 ~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 225 (483)
T PRK03640 147 MYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-GLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKLL 225 (483)
T ss_pred EeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-CCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHH
Confidence 9999999999999999999988776666655 567889999999999999998788999999999999989999999999
Q ss_pred HHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCC
Q 008895 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (549)
Q Consensus 278 ~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~ 357 (549)
+++++|++.++|+++..+++..... ....++|.+++||+++++++.+.+++. ++++++.||+||++..++.......
T Consensus 226 ~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~ 302 (483)
T PRK03640 226 QTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDA 302 (483)
T ss_pred HHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccc
Confidence 9999999999999999998765432 334789999999999999999998875 7899999999998765444333333
Q ss_pred CCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEE
Q 008895 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIV 437 (549)
Q Consensus 358 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~ 437 (549)
....+++|+|++++++++.++ +++++.|+.|||+|+|++++.||+++++.+...| .++||+|||+++++++|++++.
T Consensus 303 ~~~~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~ 379 (483)
T PRK03640 303 LTKLGSAGKPLFPCELKIEKD--GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVL 379 (483)
T ss_pred cccCCCcccccCCcEEEEecC--CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEe
Confidence 445689999999999999984 3789999999999999999999999999988887 5899999999999999999999
Q ss_pred cccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEE
Q 008895 438 DRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRV 517 (549)
Q Consensus 438 GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i 517 (549)
||++|++|.+|.+|++.+||+++.++++|.++++++.+++..++.++++++.. ...+.+++.++++++|+.+++|..|
T Consensus 380 GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~l~~~~~p~~i 457 (483)
T PRK03640 380 DRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKS--GEVTEEELRHFCEEKLAKYKVPKRF 457 (483)
T ss_pred ecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeC--CCCCHHHHHHHHHHhccCCCCCcEE
Confidence 99999999999999999999999999999999999998877778888888754 3567899999999999999999999
Q ss_pred EEeCccCCCCCCcccHHHHHcccCc
Q 008895 518 AFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 518 ~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+++++||+|++||++|++|++++.+
T Consensus 458 ~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 458 YFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EEeCCCCCCCccceeHHHHHHHHhh
Confidence 9999999999999999999998763
No 38
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-69 Score=565.72 Aligned_cols=498 Identities=23% Similarity=0.308 Sum_probs=403.0
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.+.+.++++ |+++|+++...+..+||+||.++++++|+.|.+ .|+++|++|+++++|++++++++|||++
T Consensus 14 ~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~e~~~~~lA~~~ 88 (540)
T PRK05857 14 STVLDRVFEQARQQ----PEAIALRRCDGTSALRYRELVAEVGGLAADLRA-QSVSRGSRVLVISDNGPETYLSVLACAK 88 (540)
T ss_pred cchHHHHHHHHhhC----CCcEEEeecCCCceeeHHHHHHHHHHHHHHHHH-hCcCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 58999999999999 999999865335689999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCeEEEecCCchhhhhc-ccCCCccccccccCC
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRTILIDSPEFDSMTM-SWNSKHELDRAKVCQ 191 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 191 (549)
+|++++|+++.++.+++.++++.++++++|+++........+ ....+.++......... ..............+
T Consensus 89 ~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (540)
T PRK05857 89 LGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAASLAGNADQGS 168 (540)
T ss_pred cCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccccccccccCCCC
Confidence 999999999999999999999999999999987653222111 11233332211100000 000000011223456
Q ss_pred CCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhc---cCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCc
Q 008895 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA---SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRF 268 (549)
Q Consensus 192 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~ 268 (549)
+++++++|||||||.||+|.++|+++.++...... .......+++.+..+|++|.++++..+.++..|+++++ ...
T Consensus 169 ~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~-~~~ 247 (540)
T PRK05857 169 EDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVT-GGE 247 (540)
T ss_pred CCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHhhcceeEEe-cCC
Confidence 88999999999999999999999999876543221 11134456889999999999999888889999998765 456
Q ss_pred CHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccc
Q 008895 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (549)
Q Consensus 269 ~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~ 348 (549)
++..+++.|+++++|+++++|+++..+++........++++|.+++||++++....+ +.+.+ ++++.+.||+||++..
T Consensus 248 ~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~~ 325 (540)
T PRK05857 248 NTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGCT 325 (540)
T ss_pred ChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCce
Confidence 889999999999999999999999999887765666789999999999999988775 44555 7899999999999865
Q ss_pred eecccCcCC---CCCCCccccccCCcEEEEEcCCCCCcC-----CCCCcceEEEecCCcccccCCCccccccccCCCCee
Q 008895 349 VFRTVGPDE---CRRWGSTGRLSAGLEAKIVDPETGDSL-----PPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (549)
Q Consensus 349 ~~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~~~-----~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~ 420 (549)
......... ..+.+++|+|++|++++|+|++...++ +.|+.|||+|+|++++.||+++++.+.+.| .+|||
T Consensus 326 ~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~ 404 (540)
T PRK05857 326 ALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWV 404 (540)
T ss_pred eeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCce
Confidence 443222111 224578999999999999995544333 457899999999999999999999998888 48999
Q ss_pred ecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCC-CHHH
Q 008895 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSL-NEAE 499 (549)
Q Consensus 421 ~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~-~~~~ 499 (549)
+|||+|++|++|++++.||.||+||.+|++|+|.+||++|..||+|.+++|++.++...++.++++++..+.... ..++
T Consensus 405 ~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~ 484 (540)
T PRK05857 405 NTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARA 484 (540)
T ss_pred eccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHH
Confidence 999999999999999999999999999999999999999999999999999999987777888888876543221 1233
Q ss_pred ----HHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 500 ----IMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 500 ----i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
+.++++++++++++|..++++++||+|++||++|++|++.+...+
T Consensus 485 l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~~ 533 (540)
T PRK05857 485 LKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATADK 533 (540)
T ss_pred HHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhcc
Confidence 444556779999999999999999999999999999999886543
No 39
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=2.6e-68 Score=572.96 Aligned_cols=505 Identities=19% Similarity=0.262 Sum_probs=402.0
Q ss_pred CCCCHHHHHhhc-ccCCCCCCCCCcEEEECCCC------ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChH
Q 008895 36 APISAVDYVSSL-RATLPWRDDDTVALINSVTG------LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (549)
Q Consensus 36 ~~~~~~~~~~~~-~~~~~~~~p~~~a~~~~~~~------~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~ 108 (549)
..+|+.+.+.++ ++++ |+++|++....+ +++||+||.++++++|+.|++ +|+++||+|+++++|++++
T Consensus 172 ~~ln~~~~~l~~~~~~~----pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrVai~~pn~~e~ 246 (728)
T PLN03052 172 AVLNVAECCLTPKPSKT----DDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-LGFEKGDAIAIDMPMNVHA 246 (728)
T ss_pred CEeEHHHHHHHHHhccC----CCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHH
Confidence 347777755544 3556 999999875322 489999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHH---------HHhc-CCCeEEEec-----------
Q 008895 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH---------KLAK-LKHRTILID----------- 167 (549)
Q Consensus 109 ~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~-~~~~~~~~~----------- 167 (549)
++++|||+++|++++|++|.++.+++.+++++++++++|+++.... .+.. ....++++.
T Consensus 247 via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~ 326 (728)
T PLN03052 247 VIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLR 326 (728)
T ss_pred HHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccc
Confidence 9999999999999999999999999999999999999999875321 1111 111122221
Q ss_pred --CCchhhhhcccCC---CccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecC
Q 008895 168 --SPEFDSMTMSWNS---KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP 242 (549)
Q Consensus 168 --~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~p 242 (549)
...|.++...... ..........++++++|+|||||||.||||+++|.+++.........+ ...++|+++..+|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-~l~~~d~~~~~~~ 405 (728)
T PLN03052 327 EGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-DIRKGDIVCWPTN 405 (728)
T ss_pred cCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-CCCCCcEEEECCC
Confidence 1123333221110 000111122458899999999999999999999999877665554444 4677899999999
Q ss_pred hhhHHHHHHHHHHhhhccEEEEecC-cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCH
Q 008895 243 YFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (549)
Q Consensus 243 l~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~ 321 (549)
+.|+++.+.++.++..|+++++.+. .+...+++.++++++|++.++|+++..|.+.......++++||.++++||++++
T Consensus 406 l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~ 485 (728)
T PLN03052 406 LGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSV 485 (728)
T ss_pred cHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCH
Confidence 9999998878899999999999864 456789999999999999999999999987654456678999999999999999
Q ss_pred HHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCC--cceEEEecCC-
Q 008895 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK--EGELSIRGPT- 398 (549)
Q Consensus 322 ~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~g~~- 398 (549)
+...++.+.++...+.+.||+||++....... .......+++|.|.+|++++|+| +++++++.|+ .|||+++++.
T Consensus 486 ~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~-~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~ 563 (728)
T PLN03052 486 DDYLWLMSRAGYKPIIEYCGGTELGGGFVTGS-LLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMF 563 (728)
T ss_pred HHHHHHHHhcCCCCeEeeccChhhCcccccCC-CCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCC
Confidence 99988888775467899999999976543321 12233467899999999999999 7789999885 5999998653
Q ss_pred -cccccCCCccccccccC------CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHH-cCCCcceEE
Q 008895 399 -IMKGYVGEPEVTSATLL------PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLL-SHREVADAA 470 (549)
Q Consensus 399 -~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~-~~~~v~~~~ 470 (549)
...+|+++. .....|. ...||+|||++++|++|+++++||+||+||++|++|++.|||++|. .||+|.+++
T Consensus 564 ~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaa 642 (728)
T PLN03052 564 GASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETA 642 (728)
T ss_pred CCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEE
Confidence 335666653 2222232 1238999999999999999999999999999999999999999995 799999999
Q ss_pred EEeecCCCCC-ceeEEEEEeC--CCCCCCHHHHHH----HHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 471 VIPYPDEEAG-QMPMAFVVRQ--PHSSLNEAEIME----FVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 471 vv~~~~~~~~-~~~~~~v~~~--~~~~~~~~~i~~----~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
|++++++..+ +.+++||+++ ++...+.++|++ +++++|++++.|+.|+++++||+|++|||+|+.|++++.+.
T Consensus 643 Vvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~~ 722 (728)
T PLN03052 643 AIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQE 722 (728)
T ss_pred EEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHhh
Confidence 9999987665 8899999987 454456556555 46678899999999999999999999999999999999877
Q ss_pred CCCcCC
Q 008895 544 GSSCRL 549 (549)
Q Consensus 544 ~~~~~~ 549 (549)
...++|
T Consensus 723 ~~~~~~ 728 (728)
T PLN03052 723 LSRSKL 728 (728)
T ss_pred hhccCC
Confidence 655543
No 40
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.4e-69 Score=577.41 Aligned_cols=492 Identities=22% Similarity=0.273 Sum_probs=389.0
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEEC-----CCC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINS-----VTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~-----~~~--~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v 110 (549)
.|+.+++.+.++++ |+++|+... ..+ ..+||+||.++++++|++|++ +|+++||+|+|+++|++++++
T Consensus 45 ~t~~~~l~~~a~~~----pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~n~~e~~~ 119 (666)
T PLN02614 45 DSCWDVFRMSVEKY----PNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-VGVKDEAKCGIYGANSPEWII 119 (666)
T ss_pred CcHHHHHHHHHHhC----CCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 48999999999999 999999731 112 358999999999999999998 999999999999999999999
Q ss_pred HHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC------CC-eEEEecCC--------------
Q 008895 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KH-RTILIDSP-------------- 169 (549)
Q Consensus 111 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~-~~~~~~~~-------------- 169 (549)
++|||+++|+++||+++.++.+++.+++++++++++|++.+....+... .. .++.++..
T Consensus 120 ~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~ 199 (666)
T PLN02614 120 SMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLV 199 (666)
T ss_pred HHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcE
Confidence 9999999999999999999999999999999999999987655444211 01 23333321
Q ss_pred --chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC----CCCCCCcEEEEecCh
Q 008895 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS----PKRVSPAVMLFTMPY 243 (549)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----~~~~~~~~~~~~~pl 243 (549)
.++++....... ........++++++|+|||||||.||||++||+++++.+......+ .....+|++++.+|+
T Consensus 200 ~~~~~~~~~~~~~~-~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 278 (666)
T PLN02614 200 IYAWDEFLKLGEGK-QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPL 278 (666)
T ss_pred EEEHHHHHhhcccC-CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccH
Confidence 122222111100 1111234578999999999999999999999999998776544432 135678999999999
Q ss_pred hhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC----------------------
Q 008895 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST---------------------- 301 (549)
Q Consensus 244 ~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~---------------------- 301 (549)
+|.+++...+.++..|+++++.+ +++..+++.|++++||+++++|+++..+......
T Consensus 279 ~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 357 (666)
T PLN02614 279 AHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFG 357 (666)
T ss_pred HHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999865666778899988764 5899999999999999999999999877642100
Q ss_pred ---------CCC-------------CC-CCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCC
Q 008895 302 ---------DGY-------------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (549)
Q Consensus 302 ---------~~~-------------~l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~ 358 (549)
... .+ +++|.+++||+++++.+ .++.+.++++.+++.||+||++...+.... ...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~-~~~ 435 (666)
T PLN02614 358 NMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLP-DEL 435 (666)
T ss_pred HHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeecc-ccC
Confidence 000 01 58999999999999875 566676766899999999999765443221 222
Q ss_pred CCCCccccccCCcEEEEEcC-C-CCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEE
Q 008895 359 RRWGSTGRLSAGLEAKIVDP-E-TGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFI 436 (549)
Q Consensus 359 ~~~~~~G~~~~~~~~~i~d~-~-~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~ 436 (549)
...+++|+|+||++++|+|+ + .+.+++.|+.|||+|+||+++.|||++|+.|.+.| .+|||+|||+|++|+||++++
T Consensus 436 ~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~i 514 (666)
T PLN02614 436 DMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWLHTGDVGEWQPNGSMKI 514 (666)
T ss_pred CcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCcccceEEEEcCCCCEEE
Confidence 34689999999999999983 3 24688999999999999999999999999999998 589999999999999999999
Q ss_pred EcccCCeeee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC----------CCC---------
Q 008895 437 VDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS----------SLN--------- 496 (549)
Q Consensus 437 ~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~----------~~~--------- 496 (549)
+||+||+||+ +|++|+|.+||++|.+||.|.+++|++.+. ...++++|++.... ..+
T Consensus 515 ~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~---~~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (666)
T PLN02614 515 IDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSF---ESFLVAIANPNQQILERWAAENGVSGDYNALCQNEK 591 (666)
T ss_pred EEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCC---cceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHH
Confidence 9999999997 799999999999999999999999998653 23688888865320 001
Q ss_pred -HHHHHHHH-----HhcCCCCCcccEEEEeC-cc-----CCCCCCcccHHHHHcccCc
Q 008895 497 -EAEIMEFV-----ARQVSPYKKIRRVAFIN-AI-----PKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 497 -~~~i~~~l-----~~~l~~~~~p~~i~~v~-~l-----P~t~~GKv~r~~l~~~~~~ 542 (549)
.+.+.+.+ +++|+.+.+++.|.++. ++ .+|+++|++|+.+.+.|.+
T Consensus 592 ~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~ 649 (666)
T PLN02614 592 AKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQS 649 (666)
T ss_pred HHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHH
Confidence 12233333 35699999999888874 44 3799999999999887743
No 41
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=4e-68 Score=563.93 Aligned_cols=499 Identities=30% Similarity=0.448 Sum_probs=427.1
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|.+.++++ |+++|+++...++++||.||.++++++|+.|.+ .|+++|++|+++++|++++++++|||++
T Consensus 16 ~~l~~~l~~~~~~~----~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~ 90 (559)
T PRK08315 16 QTIGQLLDRTAARY----PDREALVYRDQGLRWTYREFNEEVDALAKGLLA-LGIEKGDRVGIWAPNVPEWVLTQFATAK 90 (559)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 68999999999999 999999886557899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHH-----HHh----cC---------------CCeEEEecC-----
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-----KLA----KL---------------KHRTILIDS----- 168 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~----~~---------------~~~~~~~~~----- 168 (549)
+|++++|++|..+.+++..+++.+++++++++..... .+. +. ...++.++.
T Consensus 91 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (559)
T PRK08315 91 IGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPG 170 (559)
T ss_pred hCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCcc
Confidence 9999999999999999999999999999999865321 111 00 001222221
Q ss_pred -CchhhhhcccCC----CccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecCh
Q 008895 169 -PEFDSMTMSWNS----KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (549)
Q Consensus 169 -~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl 243 (549)
..+.++...... ..........++++++++|||||||.||+|.++|+++..+.......+ ....+++++..+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~ 249 (559)
T PRK08315 171 MLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM-KLTEEDRLCIPVPL 249 (559)
T ss_pred cccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc-CCCCCceEEEecCc
Confidence 123332211100 001112234567899999999999999999999999988887766666 56788999999999
Q ss_pred hhHHHH-HHHHHHhhhccEEEE-ecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCH
Q 008895 244 FHIYGL-FFCFRAAALMETAVV-MQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (549)
Q Consensus 244 ~~~~g~-~~~~~~l~~g~~~~~-~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~ 321 (549)
+|.+++ ..++.++..|+++++ ...+++..+++.++++++|+++++|+++..++.........++++|.+++||++++.
T Consensus 250 ~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~ 329 (559)
T PRK08315 250 YHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPI 329 (559)
T ss_pred HHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCH
Confidence 999988 557788889999884 446899999999999999999999999988887766556678999999999999999
Q ss_pred HHHHHHHHhCCCCcEEcccCccccccceecccCcC-CCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcc
Q 008895 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPD-ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (549)
Q Consensus 322 ~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 400 (549)
++.+.+.+.++...+++.||+||++.+++...... ......++|+|++++.++|+|+++++.++.|+.|||+|+|+.++
T Consensus 330 ~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~ 409 (559)
T PRK08315 330 EVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVM 409 (559)
T ss_pred HHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhh
Confidence 99999999996667999999999987665433222 22346789999999999999987799999999999999999999
Q ss_pred cccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCC
Q 008895 401 KGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAG 480 (549)
Q Consensus 401 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~ 480 (549)
.||+++++.+...|..++||+|||+|+++++|.+++.||.+|+++++|++|++.+||++|.++++|.+++|++.++...+
T Consensus 410 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~ 489 (559)
T PRK08315 410 KGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYG 489 (559)
T ss_pred hhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCC
Confidence 99999999998888778999999999999999999999999999999999999999999999999999999999988778
Q ss_pred ceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 481 QMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 481 ~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+.++++|+...+...+.+++.++++++++.|++|..++++++||+|++||++|++|++++..
T Consensus 490 ~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~ 551 (559)
T PRK08315 490 EEVCAWIILRPGATLTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREMMIE 551 (559)
T ss_pred eEEEEEEEeCCCCCCCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHHHHh
Confidence 88899998877666788999999999999999999999999999999999999999998654
No 42
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=5.2e-68 Score=568.64 Aligned_cols=494 Identities=19% Similarity=0.210 Sum_probs=395.3
Q ss_pred CCCCHHHHHhhcccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHH
Q 008895 36 APISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (549)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~ 112 (549)
..+|+.+.+.++ . ++++|++.... .+++||+||.++++++|+.|++ +|+++||+|+++++|++++++++
T Consensus 85 ~~~n~~~~~~~~---~----~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~~n~~e~~~~~ 156 (652)
T TIGR01217 85 ARLNYAENLLRA---A----GTEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-LGVRPGDRVSGYLPNIPQAVVAM 156 (652)
T ss_pred CeeeHHHHHhcc---C----CCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHH
Confidence 347888877763 4 56788765321 2589999999999999999998 89999999999999999999999
Q ss_pred HHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH---------HHHh----cCC--CeEEEecC---------
Q 008895 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKLA----KLK--HRTILIDS--------- 168 (549)
Q Consensus 113 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~~~--~~~~~~~~--------- 168 (549)
|||+++|++++|+++.++.+++.+++++++++++|+++... ..+. ... ..++.++.
T Consensus 157 lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 236 (652)
T TIGR01217 157 LATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAP 236 (652)
T ss_pred HHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccc
Confidence 99999999999999999999999999999999999976531 2111 111 12333221
Q ss_pred -----CchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHH-HHhhccCCCCCCCcEEEEecC
Q 008895 169 -----PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV-ASSFASSPKRVSPAVMLFTMP 242 (549)
Q Consensus 169 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~-~~~~~~~~~~~~~~~~~~~~p 242 (549)
..++++..... ...........+++++|+|||||||.||||+++|.+++... ......+ ...++|++++.+|
T Consensus 237 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~~~ 314 (652)
T TIGR01217 237 KIDGALDLEDFTAAAQ-AAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-DLGPGDRLFYYTT 314 (652)
T ss_pred cccCcccHHHHHhccc-CCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-CCCCCcEEEEeCC
Confidence 11233222110 00111223456889999999999999999999999875433 3333333 4677899999999
Q ss_pred hhhHHHHHHHHHHhhhccEEEEecC----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC--CCCCCCCCceEEEEec
Q 008895 243 YFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGA 316 (549)
Q Consensus 243 l~~~~g~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~~G 316 (549)
+.|+.+ ..++.++..|+++++.+. .++..++++++++++|++..+|.++..+..... ....++++||.+++||
T Consensus 315 ~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gG 393 (652)
T TIGR01217 315 TGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTG 393 (652)
T ss_pred cchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeec
Confidence 998754 335578999999999752 378899999999999999888887777665321 2345689999999999
Q ss_pred CCCCHHHHHHHHHhCC-CCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEe
Q 008895 317 APLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIR 395 (549)
Q Consensus 317 e~l~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 395 (549)
+++++++.+++.+.++ +..+.+.||+||++...... ........+++|.|.+|++++|+| ++++++ .|+.|||+++
T Consensus 394 e~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~-~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v~ 470 (652)
T TIGR01217 394 SPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGA-NPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVCT 470 (652)
T ss_pred CCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCC-CCCCCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEEe
Confidence 9999999999999883 35677899999975433221 122233457889999999999999 567777 5999999999
Q ss_pred cC--CcccccCCCccccc--cc-cC-CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceE
Q 008895 396 GP--TIMKGYVGEPEVTS--AT-LL-PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADA 469 (549)
Q Consensus 396 g~--~~~~gy~~~~~~~~--~~-~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~ 469 (549)
|+ +++.|||++++.+. .. |. .+|||+|||+|++|+||++++.||+||+||.+|++|+|.|||++|.+||+|.++
T Consensus 471 gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~ea 550 (652)
T TIGR01217 471 NPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRES 550 (652)
T ss_pred cCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceE
Confidence 96 68999999998654 12 21 268899999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 470 AVIPYPDEEAGQMPMAFVVRQPHSSLNE---AEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 470 ~vv~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
+|++++++..++.+++||+++++...+. ++|+++++++|++++.|+.|+++++||+|++|||+|+.||+++...
T Consensus 551 avvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~ 627 (652)
T TIGR01217 551 LCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGT 627 (652)
T ss_pred EEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCC
Confidence 9999999888999999999987655444 5899999999999999999999999999999999999999997544
No 43
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-67 Score=553.49 Aligned_cols=488 Identities=25% Similarity=0.339 Sum_probs=414.5
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.+.+.+. ++++|++.. ++.+||.||.++++++|++|++..|++++++|+++++|+++++++++||++
T Consensus 5 ~~~~~~l~~~a~------~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~ 76 (529)
T PRK07867 5 PTVAELLLPLAE------DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAAL 76 (529)
T ss_pred ccHHHHHHHhcc------cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 578888887763 678899887 789999999999999999999833899999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC--CCeEEEecCCchhhhhcccCCCccccccccCCCCEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL--KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVA 195 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 195 (549)
+|++++|+++..+.+++..++++++++++++++.....+... ...++.++...+.+........ ........+++++
T Consensus 77 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~ 155 (529)
T PRK07867 77 SGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDSPAWADELAAHRDA-EPPFRVADPDDLF 155 (529)
T ss_pred cCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEeccccHHHHhcccCCC-CCCcccCCccceE
Confidence 999999999999999999999999999999998877655543 2334444443444433221111 1112234678899
Q ss_pred EEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHH-HHHHHhhhccEEEEecCcCHHHHH
Q 008895 196 AIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAALMETAVVMQRFDLKMML 274 (549)
Q Consensus 196 ~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l~~g~~~~~~~~~~~~~~~ 274 (549)
+++|||||||.||+|+++|+++..+.......+ +....|+++..+|++|.+++. ..+.++..|+++++.+.+++..++
T Consensus 156 ~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 234 (529)
T PRK07867 156 MLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-GLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFL 234 (529)
T ss_pred EEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-CCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHH
Confidence 999999999999999999999988887776666 467789999999999999884 455678899999888888999999
Q ss_pred HHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccC
Q 008895 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (549)
Q Consensus 275 ~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~ 354 (549)
+.++++++|++.++|+.+..++..........+++|. ++||+.+++.. .++.+.+ ++++++.||+||++..+....
T Consensus 235 ~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~~- 310 (529)
T PRK07867 235 PDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRTP- 310 (529)
T ss_pred HHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccCC-
Confidence 9999999999999999999888765433333467774 56888887764 6777777 789999999999986544321
Q ss_pred cCCCCCCCccccccCCcEEEEEcCCCCCcCCCCC------------cceEEE-ecCCcccccCCCccccccccCCCCeee
Q 008895 355 PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK------------EGELSI-RGPTIMKGYVGEPEVTSATLLPDGWMR 421 (549)
Q Consensus 355 ~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~------------~Gel~v-~g~~~~~gy~~~~~~~~~~~~~~~~~~ 421 (549)
....+++|.|+++ ++++|++++.+++.|+ .|||++ +|++++.||+++++.+...| .+|||+
T Consensus 311 ---~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~ 384 (529)
T PRK07867 311 ---DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYW 384 (529)
T ss_pred ---CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEe
Confidence 1244688999999 7788877888898888 899999 99999999999999988877 589999
Q ss_pred cCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHH
Q 008895 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIM 501 (549)
Q Consensus 422 TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~ 501 (549)
|||+|+++++|++++.||.||+++++|++|+|.+||++|.++|+|.+++|++.+++..++.++++++..++...+.+++.
T Consensus 385 TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~~~~l~ 464 (529)
T PRK07867 385 SGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFDPDAFA 464 (529)
T ss_pred eccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998889999999998877778899999
Q ss_pred HHHHhc--CCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCC
Q 008895 502 EFVARQ--VSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 502 ~~l~~~--l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
++++++ |+++++|..|+++++||+|++||++|++|++++.....
T Consensus 465 ~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~~~ 510 (529)
T PRK07867 465 EFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDCAD 510 (529)
T ss_pred HHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCCCC
Confidence 999875 99999999999999999999999999999999977654
No 44
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6e-68 Score=558.47 Aligned_cols=498 Identities=28% Similarity=0.435 Sum_probs=421.8
Q ss_pred CCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHH
Q 008895 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (549)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~ 115 (549)
.++|+.+++...++++ |+++|+++. ++++||.||.++++++|+.|++ .|+++|++|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~ 77 (528)
T PRK07470 5 RVMNLAHFLRQAARRF----PDRIALVWG--DRSWTWREIDARVDALAAALAA-RGVRKGDRILVHSRNCNQMFESMFAA 77 (528)
T ss_pred cCCCHHHHHHHHHHHC----CCceEEEEC--CccccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4589999999999999 999999987 7899999999999999999998 89999999999999999999999999
Q ss_pred HHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC------CCeEEEecC----CchhhhhcccCCCcccc
Q 008895 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHRTILIDS----PEFDSMTMSWNSKHELD 185 (549)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~~~~~~~----~~~~~~~~~~~~~~~~~ 185 (549)
+++|++++|+++..+.+++.++++.++++.++++....+..... ....+.++. ..+.++....... ...
T Consensus 78 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 156 (528)
T PRK07470 78 FRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHLGA-RVA 156 (528)
T ss_pred HhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCCCC-CCC
Confidence 99999999999999999999999999999999998765443321 112333322 1233332221111 111
Q ss_pred ccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC-CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEE
Q 008895 186 RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVV 264 (549)
Q Consensus 186 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~ 264 (549)
.....++++++++|||||||.||+|.++|+++...+....... ......++++..+|++|.+++...+ .+..|++.++
T Consensus 157 ~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~~ 235 (528)
T PRK07470 157 NAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVARGAATVL 235 (528)
T ss_pred cccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHhcCceEEE
Confidence 2234568899999999999999999999999976554332222 2346778999999999999886544 5667777766
Q ss_pred ec--CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCc
Q 008895 265 MQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (549)
Q Consensus 265 ~~--~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~ 342 (549)
.. .+++..+++.|+++++|++.++|+++..+.+........++++|.+++||+++++...+++.+.+ +..+++.||+
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~ 314 (528)
T PRK07470 236 LPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGL 314 (528)
T ss_pred ecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCC
Confidence 54 47899999999999999999999999999887766666789999999999999999999999888 6789999999
Q ss_pred cccccceecccCc------CCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC
Q 008895 343 TESTAGVFRTVGP------DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP 416 (549)
Q Consensus 343 tE~~~~~~~~~~~------~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~ 416 (549)
||++..+...... ......+++|.|++++.++++| +++++++.|+.|||+++|+.++.||+++++.+...| .
T Consensus 315 TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~-~ 392 (528)
T PRK07470 315 GEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF-R 392 (528)
T ss_pred cccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-c
Confidence 9988765432110 0122447889999999999999 678899999999999999999999999999988877 5
Q ss_pred CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCC
Q 008895 417 DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLN 496 (549)
Q Consensus 417 ~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~ 496 (549)
++||+|||+|+++++|++++.||.||++|++|++|+|.+||++|.+++.|.+++|++.++...++.++++++..+....+
T Consensus 393 ~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (528)
T PRK07470 393 DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPVD 472 (528)
T ss_pred CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999887788888898887665678
Q ss_pred HHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCC
Q 008895 497 EAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 497 ~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
.++++++++++|+++++|..++++++||+|++||++|+.|++++++.++
T Consensus 473 ~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 521 (528)
T PRK07470 473 EAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERGL 521 (528)
T ss_pred HHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhccc
Confidence 8999999999999999999999999999999999999999999887765
No 45
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.3e-68 Score=562.04 Aligned_cols=499 Identities=28% Similarity=0.416 Sum_probs=424.2
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|.+.++++ |+++|++....++.+||.||.++++++|++|.+ .|+++|++|+++++|++++++++|||++
T Consensus 18 ~~l~~~l~~~~~~~----p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~~a~~~ 92 (558)
T PRK12583 18 QTIGDAFDATVARF----PDREALVVRHQALRYTWRQLADAVDRLARGLLA-LGVQPGDRVGIWAPNCAEWLLTQFATAR 92 (558)
T ss_pred CcHHHHHHHHHHHC----CCCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 68999999999999 999999886557899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH-----HHHh----cC--------------CC-eEEEecCC----
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLA----KL--------------KH-RTILIDSP---- 169 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~----~~--------------~~-~~~~~~~~---- 169 (549)
+|++++++++.++.+++.+++++++++++|+++... ..+. .. .. ..+..+..
T Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
T PRK12583 93 IGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPG 172 (558)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCcc
Confidence 999999999999999999999999999999976432 1111 00 00 11111110
Q ss_pred --chhhhhcccCCC----ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecCh
Q 008895 170 --EFDSMTMSWNSK----HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (549)
Q Consensus 170 --~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl 243 (549)
.|++........ .........+++.++++|||||||.||+|.++|+++.++.......+ +...++++++.+|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~ 251 (558)
T PRK12583 173 FLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL-GLTEHDRLCVPVPL 251 (558)
T ss_pred ccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh-CCCCCCeEEEecCc
Confidence 122211110000 00011223567899999999999999999999999988887766665 46778999999999
Q ss_pred hhHHHH-HHHHHHhhhccEEEEe-cCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCH
Q 008895 244 FHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (549)
Q Consensus 244 ~~~~g~-~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~ 321 (549)
+|.+|+ ...+.++..|+++++. ..+++..+++.+.++++|+++++|+++..++........+++++|.+++||+++++
T Consensus 252 ~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~ 331 (558)
T PRK12583 252 YHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPI 331 (558)
T ss_pred hhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCH
Confidence 999998 5567778888888864 35789999999999999999999999988887765556678999999999999999
Q ss_pred HHHHHHHHhCCCCcEEcccCccccccceecccCc-CCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcc
Q 008895 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP-DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (549)
Q Consensus 322 ~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 400 (549)
++.+++.+.+++..+.+.||+||++.++...... ......+++|.|.+++.++|+|++ +.+++.|+.|||+|+|+.++
T Consensus 332 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~ 410 (558)
T PRK12583 332 EVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSVM 410 (558)
T ss_pred HHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCccc
Confidence 9999999999777899999999999876653221 122345789999999999999966 89999999999999999999
Q ss_pred cccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCC
Q 008895 401 KGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAG 480 (549)
Q Consensus 401 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~ 480 (549)
.||+++++.+...|..++||+|||+|+++++|++++.||++|+++++|.+|+|.+||++|..+++|.+++|++.++...+
T Consensus 411 ~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~ 490 (558)
T PRK12583 411 KGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYG 490 (558)
T ss_pred hhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCC
Confidence 99999999988888778999999999999999999999999999999999999999999999999999999999988778
Q ss_pred ceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 481 QMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 481 ~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
+.++++++..+....+.++++++++++|+.+++|..++++++||+|++||++|++|++++.+.
T Consensus 491 ~~~~~~v~~~~~~~~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~~~ 553 (558)
T PRK12583 491 EEIVAWVRLHPGHAASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISIEE 553 (558)
T ss_pred cEEEEEEEECCCCCCCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHHhh
Confidence 899999998776667789999999999999999999999999999999999999999987654
No 46
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=9.6e-68 Score=554.22 Aligned_cols=490 Identities=28% Similarity=0.417 Sum_probs=424.5
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
-++.+.+.+++ .+ |+++|+.+. .++.+||.||.++++++|++|++ .|+++||+|+++++|+.+++++++||++
T Consensus 3 ~~l~~~~~~~~-~~----~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~v~i~~~~~~e~~v~~la~~~ 75 (504)
T PRK07514 3 NNLFDALRAAF-AD----RDAPFIETP-DGLRYTYGDLDAASARLANLLVA-LGVKPGDRVAVQVEKSPEALALYLATLR 75 (504)
T ss_pred ccHHHHHHHHh-hC----CCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 47899999999 88 999999874 36899999999999999999999 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCe-EEEecCCc---hhhhhcccCCCcccccccc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSPE---FDSMTMSWNSKHELDRAKV 189 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 189 (549)
+|++++|+++..+.+++..+++.+++++++++......+... +.. ++.++... +.+...... . .......
T Consensus 76 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 153 (504)
T PRK07514 76 AGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAP-D-DFETVPR 153 (504)
T ss_pred cCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcC-c-ccCcccC
Confidence 999999999999999999999999999999998766554322 222 33333211 111111100 0 1112234
Q ss_pred CCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEecCc
Q 008895 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRF 268 (549)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~ 268 (549)
.++++++++|||||||.||+|.++|+++..........+ ...+++++++.+|++|..++ ...+.++..|+++++.+..
T Consensus 154 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 232 (504)
T PRK07514 154 GADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-RFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKF 232 (504)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCC
Confidence 578899999999999999999999999998877666555 46778899999999999998 4567889999999998888
Q ss_pred CHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccc
Q 008895 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (549)
Q Consensus 269 ~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~ 348 (549)
++..+++.+ .++|+++++|+++..++.........++++|.+++||+++++++.+.+.+.+ +.++++.||+||++..
T Consensus 233 ~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 309 (504)
T PRK07514 233 DPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMN 309 (504)
T ss_pred CHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeeccccccccc
Confidence 999999999 4799999999999999887665666688999999999999999999999988 6789999999999865
Q ss_pred eecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEE
Q 008895 349 VFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYI 428 (549)
Q Consensus 349 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~ 428 (549)
.... .......+++|.|+++++++|+|++++++++.|+.|||+|+|+.++.||+++++.+.+.|..++||+|||++++
T Consensus 310 ~~~~--~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~ 387 (504)
T PRK07514 310 TSNP--YDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKI 387 (504)
T ss_pred ccCC--ccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEE
Confidence 4432 12223457899999999999999899999999999999999999999999999999999988999999999999
Q ss_pred ecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcC
Q 008895 429 DEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQV 508 (549)
Q Consensus 429 ~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l 508 (549)
+++|.+++.||+||++|.+|++|+|.+||+++.++++|.+++|++.++...++.++++++..+....+.+++.++++++|
T Consensus 388 ~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 467 (504)
T PRK07514 388 DERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALKGRL 467 (504)
T ss_pred cCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999998877788899999988777778899999999999
Q ss_pred CCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 509 SPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 509 ~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+++++|..+++++++|+|++||++|++|++++.+
T Consensus 468 ~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~ 501 (504)
T PRK07514 468 ARFKQPKRVFFVDELPRNTMGKVQKNLLREQYAD 501 (504)
T ss_pred ccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHh
Confidence 9999999999999999999999999999988653
No 47
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.3e-67 Score=555.21 Aligned_cols=487 Identities=28% Similarity=0.401 Sum_probs=416.6
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
..++.+.+.+.++++ |+++|+++. ++++||.||.++++++|..|.+ .|+++|++|+++++|+.+++++++||+
T Consensus 22 ~~~l~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~~ 94 (527)
T TIGR02275 22 DKPLTDILRDQAARY----PDAIAIICG--NRQWSYRELDQRADNLAAGLTK-LGIGQGDTAVVQLPNIAEFYIVFFALL 94 (527)
T ss_pred CCcHHHHHHHHHHHC----CCceEEEeC--CceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 358999999999988 999999987 7899999999999999999998 899999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH--------HHHhc-C-CCeEEEecC-C----chhhhhcccCCC
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV--------HKLAK-L-KHRTILIDS-P----EFDSMTMSWNSK 181 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--------~~~~~-~-~~~~~~~~~-~----~~~~~~~~~~~~ 181 (549)
++|++++++++..+.+++.++++.+++++++++.... ..+.. . ....+.+.. . .......... .
T Consensus 95 ~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 173 (527)
T TIGR02275 95 KLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLESPA-E 173 (527)
T ss_pred HcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhCcC-c
Confidence 9999999999999999999999999999999986531 11111 1 112222211 1 1111111110 0
Q ss_pred ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHH--HHHHHhhhc
Q 008895 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF--FCFRAAALM 259 (549)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~--~~~~~l~~g 259 (549)
........++++++++|||||||.||+|.++|.++..++......+ ....+++++..+|++|.+++. ..+.++..|
T Consensus 174 -~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G 251 (527)
T TIGR02275 174 -PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-WLTQQTRYLCALPAAHNYPLSSPGALGVFYAG 251 (527)
T ss_pred -cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCCEEEECCChHhhhhhhHHHHHHHHhcC
Confidence 1112234678999999999999999999999999998887766655 467789999999999999884 477889999
Q ss_pred cEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
+++++.+.+++..+++.++++++|+++++|+++..+++........++++|.+++||+++++++.+++.+.+ ++++++.
T Consensus 252 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~ 330 (527)
T TIGR02275 252 GCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQV 330 (527)
T ss_pred CeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEee
Confidence 999998888999999999999999999999999999887766666788999999999999999999999988 7899999
Q ss_pred cCccccccceecccCcCCCCCCCcccccc-CCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 008895 340 YGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~ 418 (549)
||+||++..... .........+++|+|+ ++..++++| +++++++.|+.|||+++|+.++.||+++++.+...|..+|
T Consensus 331 YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg 408 (527)
T TIGR02275 331 FGMAEGLVNYTR-LDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEG 408 (527)
T ss_pred eccCccCccccC-CCCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCC
Confidence 999996543322 1112223446889999 588999999 6788999999999999999999999999999999998899
Q ss_pred eeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHH
Q 008895 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEA 498 (549)
Q Consensus 419 ~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~ 498 (549)
||+|||+|+++++|++++.||.+|+|+.+|++|+|.+||++|.++|+|.+++|++.++...++.++++++..+. ..+.+
T Consensus 409 ~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~-~~~~~ 487 (527)
T TIGR02275 409 FYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDP-ALKAA 487 (527)
T ss_pred CEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCC-CCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998888899999988754 46789
Q ss_pred HHHHHHHhc-CCCCCcccEEEEeCccCCCCCCcccHHHHH
Q 008895 499 EIMEFVARQ-VSPYKKIRRVAFINAIPKSAAGKILRMELR 537 (549)
Q Consensus 499 ~i~~~l~~~-l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~ 537 (549)
+|+++++++ ++++++|..++++++||+|++||++|++|+
T Consensus 488 ~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 488 QLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred HHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 999999985 999999999999999999999999999875
No 48
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=6.8e-68 Score=561.81 Aligned_cols=493 Identities=27% Similarity=0.419 Sum_probs=402.2
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
+.++.+++...++++ |+++|++.. +.++||+||.++++++|++|.+ +|+++||+|+|+++|++++++++|||+
T Consensus 13 ~~~~~~~l~~~~~~~----p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~-~Gl~~gd~Vai~~~n~~e~~~~~la~~ 85 (579)
T PLN03102 13 PLTPITFLKRASECY----PNRTSIIYG--KTRFTWPQTYDRCCRLAASLIS-LNITKNDVVSVLAPNTPAMYEMHFAVP 85 (579)
T ss_pred cccHHHHHHHHHHhC----CCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 368889999889888 999999987 7899999999999999999999 899999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----------CCeEEEecCC-----------chhhh
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----------KHRTILIDSP-----------EFDSM 174 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----------~~~~~~~~~~-----------~~~~~ 174 (549)
++|++++|++|.++.+++.++++.++++++|++++..+.+.+. ..+++.++.. .+.++
T Consensus 86 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (579)
T PLN03102 86 MAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECL 165 (579)
T ss_pred hcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHH
Confidence 9999999999999999999999999999999988765544321 2234444321 11222
Q ss_pred hcccCCCccc---cccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHH
Q 008895 175 TMSWNSKHEL---DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF 251 (549)
Q Consensus 175 ~~~~~~~~~~---~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~ 251 (549)
.......... ......++++++++|||||||.||+|+++|+++........... .....++++..+|++|.+++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~ 244 (579)
T PLN03102 166 IQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW-EMGTCPVYLWTLPMFHCNGWTF 244 (579)
T ss_pred HhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-CCCCCCeEEecCChhhhcchhH
Confidence 1111100000 01123467899999999999999999999999755443333222 2455678899999999999877
Q ss_pred HHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhC
Q 008895 252 CFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKF 331 (549)
Q Consensus 252 ~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~ 331 (549)
.+.++..|++++....+++..+++.|+++++|+++++|+++..|.+.........++++.+++||+++++.+.+++.+ +
T Consensus 245 ~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~ 323 (579)
T PLN03102 245 TWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L 323 (579)
T ss_pred HHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c
Confidence 778888999999988888999999999999999999999999998865433334567888999999999999999876 4
Q ss_pred CCCcEEcccCccccccceecccCcCC------------CCCCCccccccCCcEEEEEcCCCCCcCCC--CCcceEEEecC
Q 008895 332 PKVVLVQAYGLTESTAGVFRTVGPDE------------CRRWGSTGRLSAGLEAKIVDPETGDSLPP--GKEGELSIRGP 397 (549)
Q Consensus 332 ~~~~l~~~yG~tE~~~~~~~~~~~~~------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v~g~ 397 (549)
++.+++.||+||++..++....... ....+..+.+++ .+.+++.+.+++++. ++.|||+|+|+
T Consensus 324 -g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~ 400 (579)
T PLN03102 324 -GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGS 400 (579)
T ss_pred -CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECc
Confidence 7899999999999865433211100 011223333333 455666566777764 36799999999
Q ss_pred CcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCC
Q 008895 398 TIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDE 477 (549)
Q Consensus 398 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~ 477 (549)
+++.||+++++.+...| .+|||+|||+|++|++|++++.||.+|+|+.+|++|+|.+||++|.+||.|.+++|++++++
T Consensus 401 ~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~ 479 (579)
T PLN03102 401 SIMKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHP 479 (579)
T ss_pred chhhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCc
Confidence 99999999999998888 58999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceeEEEEEeCCCCCC----------CHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 478 EAGQMPMAFVVRQPHSSL----------NEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 478 ~~~~~~~~~v~~~~~~~~----------~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
..++.++++|++.++... ..++++++++++|+.|++|..++++++||+|++||++|++|++++.+
T Consensus 480 ~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 480 TWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred cccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 888999999998755432 35789999999999999999999999999999999999999998743
No 49
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-68 Score=557.14 Aligned_cols=493 Identities=27% Similarity=0.416 Sum_probs=430.2
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+++...++++ |+++|+.+. ++.+||.||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 11 ~~l~~~l~~~a~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gi~~~~~V~l~~~~~~~~~~~~~a~~~ 83 (523)
T PRK08316 11 QTIGDILRRSARRY----PDKTALVFG--DRSWTYAELDAAVNRVAAALLD-LGLKKGDRVAALGHNSDAYALLWLACAR 83 (523)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 57999999999999 999999987 7899999999999999999999 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCeEEEec-----------CCchhhhhcccCCCc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILID-----------SPEFDSMTMSWNSKH 182 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~-----------~~~~~~~~~~~~~~~ 182 (549)
+|++++|+++..+.+++.++++.+++++++++......+.+. ....+... ...+.........
T Consensus 84 ~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 161 (523)
T PRK08316 84 AGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAGSV-- 161 (523)
T ss_pred cCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcCCC--
Confidence 999999999999999999999999999999998776655421 11111100 0112222111110
Q ss_pred cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHH-HHHHHhhhccE
Q 008895 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAALMET 261 (549)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l~~g~~ 261 (549)
.........+++++++|||||||.||+|.++|.++..........+ ...++++++..+|++|.+++. .++.++..|++
T Consensus 162 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~ 240 (523)
T PRK08316 162 AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-DMSADDIPLHALPLYHCAQLDVFLGPYLYVGAT 240 (523)
T ss_pred ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCCceEEEccCCchhhhHHHHHHHHHhcCce
Confidence 1122345668899999999999999999999999998877766666 467889999999999999884 45567889999
Q ss_pred EEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccC
Q 008895 262 AVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (549)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG 341 (549)
+++.+..++..+++.++++++|+++++|+++..+++........++++|.+++||++++.++.+.+++.+++..+++.||
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG 320 (523)
T PRK08316 241 NVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYG 320 (523)
T ss_pred EEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeec
Confidence 99998889999999999999999999999999999877666667899999999999999999999999998899999999
Q ss_pred ccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeee
Q 008895 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMR 421 (549)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~ 421 (549)
+||++.++............+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++.+...| .++||+
T Consensus 321 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~ 398 (523)
T PRK08316 321 QTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFH 398 (523)
T ss_pred ccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh-hCCCee
Confidence 999988766543333334567899999999999999 668999999999999999999999999999888887 589999
Q ss_pred cCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHH
Q 008895 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIM 501 (549)
Q Consensus 422 TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~ 501 (549)
|||+|+++++|.+++.||.||+++++|++|+|.+||+.|.++++|.+++|++.+++..++.++++++..+....+.+++.
T Consensus 399 TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 478 (523)
T PRK08316 399 SGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDELI 478 (523)
T ss_pred ccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888899999998876667788999
Q ss_pred HHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 502 EFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 502 ~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
++++++|+.+++|..+++++++|+|++||++|++|++++.+
T Consensus 479 ~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~ 519 (523)
T PRK08316 479 AHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAG 519 (523)
T ss_pred HHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHh
Confidence 99999999999999999999999999999999999999864
No 50
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.3e-67 Score=554.84 Aligned_cols=491 Identities=27% Similarity=0.409 Sum_probs=416.4
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~l 113 (549)
.++.+.+...++.+ |+++|++.. ..+..+||.||+++++++|.+|++ .|+++|++|+++++|+.+++++++
T Consensus 22 ~~~~~~~~~~~~~~----p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~l 96 (538)
T TIGR03208 22 RTINDHFDAAVANC----PDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-LGVGRGDVVSFQLPNRWEFTALYL 96 (538)
T ss_pred CcHHHHHHHHHHHC----CCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHH
Confidence 58999999999999 999998752 124689999999999999999998 899999999999999999999999
Q ss_pred HHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH-----HHH---hc-C-C-CeEEEecCC---chhhhhcccC
Q 008895 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKL---AK-L-K-HRTILIDSP---EFDSMTMSWN 179 (549)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~---~~-~-~-~~~~~~~~~---~~~~~~~~~~ 179 (549)
||+++|++++|++|.++.+++.++++.++++++++++... ... .. . . ..++..+.. .++.......
T Consensus 97 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (538)
T TIGR03208 97 ACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRVLMTPE 176 (538)
T ss_pred HHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHHHhhccc
Confidence 9999999999999999999999999999999999987542 111 11 1 1 123333321 2332221110
Q ss_pred --CCcc----ccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHH
Q 008895 180 --SKHE----LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFC 252 (549)
Q Consensus 180 --~~~~----~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~ 252 (549)
.... .......+++.++++|||||||.||+|+++|+++...+......+ ....++++++.+|++|.+++ ...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~ 255 (538)
T TIGR03208 177 RDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL-ELGGGDVILMASPMAHQTGFMYGL 255 (538)
T ss_pred cccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc-CCCCCCeEEEeCCchhHHHHHHHH
Confidence 0000 011234668999999999999999999999999998887776666 46778999999999999887 567
Q ss_pred HHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCC
Q 008895 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (549)
Q Consensus 253 ~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~ 332 (549)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..++.........++++|.+++||+++++++.+++.+.+
T Consensus 256 ~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~- 334 (538)
T TIGR03208 256 MMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL- 334 (538)
T ss_pred HHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-
Confidence 8889999999988888999999999999999999999999988876544455688999999999999999999999988
Q ss_pred CCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCcccccc
Q 008895 333 KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSA 412 (549)
Q Consensus 333 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~ 412 (549)
++.+++.||+||++.+..............++|+|+++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+.
T Consensus 335 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~- 412 (538)
T TIGR03208 335 GALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNS- 412 (538)
T ss_pred CCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCccccc-
Confidence 789999999999987665433222222245789999999999999 668889999999999999999999999988765
Q ss_pred ccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCC
Q 008895 413 TLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPH 492 (549)
Q Consensus 413 ~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~ 492 (549)
+..+|||+|||+|+++++|.+++.||.+|+++.+|++|+|.+||++|.++|+|.+++|++.++...++.+++++++...
T Consensus 413 -~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~ 491 (538)
T TIGR03208 413 -TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPG 491 (538)
T ss_pred -ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCC
Confidence 3468999999999999999999999999999999999999999999999999999999999988888999999998876
Q ss_pred CCCCHHHHHHHHHh-cCCCCCcccEEEEeCccCCCCCCcccHHHHHc
Q 008895 493 SSLNEAEIMEFVAR-QVSPYKKIRRVAFINAIPKSAAGKILRMELRK 538 (549)
Q Consensus 493 ~~~~~~~i~~~l~~-~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~ 538 (549)
...+.+++.+++++ +++.+++|..++++++||+|++||++|++|++
T Consensus 492 ~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~~ 538 (538)
T TIGR03208 492 CTLDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLRE 538 (538)
T ss_pred CCCCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhcC
Confidence 66788899999985 79999999999999999999999999999874
No 51
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-67 Score=550.01 Aligned_cols=474 Identities=26% Similarity=0.427 Sum_probs=403.2
Q ss_pred CCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHH
Q 008895 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (549)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~ 135 (549)
|+++|+.+...+..+||.||.++++++|++|.+ .|+++|++|+++++|++++++++|||+++|++++|+++..+.+.+.
T Consensus 9 p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~ 87 (488)
T PRK09088 9 PQRLAAVDLALGRRWTYAELDALVGRLAAVLRR-RGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRLSASELD 87 (488)
T ss_pred CCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccCCHHHHH
Confidence 999999874447899999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHH
Q 008895 136 RQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHR 215 (549)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~ 215 (549)
+++++++++++|+++...... ...+ .++++................++++++++|||||||.||+|.++|+
T Consensus 88 ~~~~~~~~~~ii~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~ 158 (488)
T PRK09088 88 ALLQDAEPRLLLGDDAVAAGR----TDVE-----DLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSER 158 (488)
T ss_pred HHHHhCCCCEEEEcchhhccc----cccc-----chhhhhhhccccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehH
Confidence 999999999999987543211 1111 1111111100000111122345789999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHH-HHHHHhhhccEEEEecCcCHHHHHHHHHH--hceeeeeecHHHH
Q 008895 216 NLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAALMETAVVMQRFDLKMMLKAVEE--FRVTHAAVTPPIV 292 (549)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l~~g~~~~~~~~~~~~~~~~~l~~--~~~t~l~~~P~~l 292 (549)
++........... ....++++++.+|++|.+++. .+..++..|+++++.+.+++..++..+.+ +++|+++.+|.++
T Consensus 159 ~l~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~ 237 (488)
T PRK09088 159 NLQQTAHNFGVLG-RVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMA 237 (488)
T ss_pred HHHHHHHHHHHhh-CCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHH
Confidence 9987776655544 357789999999999999984 46677888999988888889999988864 7899999999999
Q ss_pred HHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccC-cCCCCCCCccccccCCc
Q 008895 293 VAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG-PDECRRWGSTGRLSAGL 371 (549)
Q Consensus 293 ~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~-~~~~~~~~~~G~~~~~~ 371 (549)
..+.+........++++|.+++||++++.+..+.+.+. ++.+++.||+||++.+...... .......+++|.|.+++
T Consensus 238 ~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 315 (488)
T PRK09088 238 QAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTV 315 (488)
T ss_pred HHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCccccCCCCc
Confidence 99887655445567899999999999999988888765 7899999999999875432211 11123557899999999
Q ss_pred EEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEee
Q 008895 372 EAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQV 451 (549)
Q Consensus 372 ~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 451 (549)
+++|+| +++.+++.|+.|||+|+|++++.||+++++.+...+..+|||+|||+|+++++|.+++.||.+|+|+.+|++|
T Consensus 316 ~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i 394 (488)
T PRK09088 316 QTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENV 394 (488)
T ss_pred EEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEE
Confidence 999999 6788999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcc
Q 008895 452 APAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKI 531 (549)
Q Consensus 452 ~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv 531 (549)
+|.+||++|.++|.|.+++|++.++...++..+++++..++...+.+++.++++++++++++|..|.++++||+|++||+
T Consensus 395 ~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi 474 (488)
T PRK09088 395 YPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKL 474 (488)
T ss_pred CHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCce
Confidence 99999999999999999999999887777888899988766666789999999999999999999999999999999999
Q ss_pred cHHHHHcccCcC
Q 008895 532 LRMELRKVAVPS 543 (549)
Q Consensus 532 ~r~~l~~~~~~~ 543 (549)
+|++|++++.+.
T Consensus 475 ~r~~l~~~~~~~ 486 (488)
T PRK09088 475 QKARLRDALAAG 486 (488)
T ss_pred eHHHHHHHHHhc
Confidence 999999998765
No 52
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-67 Score=553.91 Aligned_cols=494 Identities=34% Similarity=0.520 Sum_probs=433.7
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
+.++.+.|...++.+ |+++|+.+. ++.+||.||+++++++|+.|.+ .|+++|++|+++++|+.+++++++||+
T Consensus 5 ~~~l~~~l~~~~~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~g~~~~~~V~l~~~~~~~~~~~~la~~ 77 (521)
T PRK06187 5 PLTIGRILRHGARKH----PDKEAVYFD--GRRTTYAELDERVNRLANALRA-LGVKKGDRVAVFDWNSHEYLEAYFAVP 77 (521)
T ss_pred cCCHHHHHHHHHHHC----CCceEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 379999999999999 999999988 6789999999999999999998 899999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----C-C-eEEEecCC----------chhhhhcccCC
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----K-H-RTILIDSP----------EFDSMTMSWNS 180 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~-~-~~~~~~~~----------~~~~~~~~~~~ 180 (549)
++|++++|+++..+.+++..+++.+++++++++......+... . . .++.++.. .+.++......
T Consensus 78 ~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 78 KIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASD 157 (521)
T ss_pred HcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCc
Confidence 9999999999999999999999999999999998876655432 1 1 23333221 22333222111
Q ss_pred CccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhcc
Q 008895 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALME 260 (549)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~ 260 (549)
........+++.++++|||||||.||+|.++|+++..........+ +..+++++++.+|++|.+++...+.++..|+
T Consensus 158 --~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (521)
T PRK06187 158 --TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-KLSRDDVYLVIVPMFHVHAWGLPYLALMAGA 234 (521)
T ss_pred --cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-CCCCCCEEEEeCCchHHhhHHHHHHHHHhCC
Confidence 1112234567899999999999999999999999998887766655 5788899999999999999977777999999
Q ss_pred EEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEccc
Q 008895 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (549)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~y 340 (549)
++++.+.+++..+++.++++++|.++++|+++..+.+........++++|.+++||+++++++++.+.+.+ ++++++.|
T Consensus 235 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 313 (521)
T PRK06187 235 KQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGY 313 (521)
T ss_pred EEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchheee
Confidence 99999888999999999999999999999999999988876667789999999999999999999999998 89999999
Q ss_pred CccccccceecccCcCC----CCCCCccccccCCcEEEEEcCCCCCcCCC--CCcceEEEecCCcccccCCCcccccccc
Q 008895 341 GLTESTAGVFRTVGPDE----CRRWGSTGRLSAGLEAKIVDPETGDSLPP--GKEGELSIRGPTIMKGYVGEPEVTSATL 414 (549)
Q Consensus 341 G~tE~~~~~~~~~~~~~----~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 414 (549)
|+||+|.++........ ....+++|.|++++.++|+| +++.+++. |+.|||+++|+.++.||+++++.+...|
T Consensus 314 G~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~ 392 (521)
T PRK06187 314 GMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI 392 (521)
T ss_pred ccCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh
Confidence 99999876655332222 12567899999999999999 55778888 9999999999999999999999888877
Q ss_pred CCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCC
Q 008895 415 LPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSS 494 (549)
Q Consensus 415 ~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~ 494 (549)
.++||+|||+++++++|.+++.||.+|++|++|.++++.+||++|.++++|.+++|++.++...++.++++++.+++..
T Consensus 393 -~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 471 (521)
T PRK06187 393 -DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGAT 471 (521)
T ss_pred -hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCC
Confidence 4779999999999999999999999999999999999999999999999999999999988777889999999887777
Q ss_pred CCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 495 LNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 495 ~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
.+.++++++++++++++++|..++++++||+|++||++|+.|++++.++
T Consensus 472 ~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 472 LDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred CCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 7889999999999999999999999999999999999999999999876
No 53
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-67 Score=552.59 Aligned_cols=486 Identities=22% Similarity=0.273 Sum_probs=405.3
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCC-CCCCEEEEEcCCCChHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~-~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
-++.+.+.+++ . |+++|+++. +..+||.||.++++++|..|.+ .|+ ++|++|+++++|+++++++++||+
T Consensus 3 ~~~~~~l~~~~--~----p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~-~g~~~~~~~V~i~~~n~~~~v~~~lA~~ 73 (540)
T PRK13388 3 DTIAQLLRDRA--G----DDTIAVRYG--DRTWTWREVLAEAAARAAALIA-LADPDRPLHVGVLLGNTPEMLFWLAAAA 73 (540)
T ss_pred hhHHHHHHhhc--c----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCcHHHHHHHHHH
Confidence 36778887654 5 899999987 7899999999999999999998 899 799999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC---CCeEEEecCCchhhhhcccCCCccccccccCCCC
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSD 193 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (549)
++|++++|++|.++.+++..++++++++++|++++....+.+. ....+.++...+.++...... ........+++
T Consensus 74 ~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 151 (540)
T PRK13388 74 LGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAAAGA--LTPHREVDAMD 151 (540)
T ss_pred hCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhccccC--cCCCCCCCCCC
Confidence 9999999999999999999999999999999998776655443 234444444444433321111 11112346789
Q ss_pred EEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHH-HHHHhhhccEEEEecCcCHHH
Q 008895 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF-CFRAAALMETAVVMQRFDLKM 272 (549)
Q Consensus 194 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~l~~g~~~~~~~~~~~~~ 272 (549)
+++++|||||||.||+|.++|.++..........+ ....+|+++..+|++|.+++.. .+.++..|+++++.+.+++..
T Consensus 152 ~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~ 230 (540)
T PRK13388 152 PFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-GLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASG 230 (540)
T ss_pred eEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-CCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHH
Confidence 99999999999999999999999988777666666 4678899999999999988854 445788999998888889999
Q ss_pred HHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecc
Q 008895 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (549)
Q Consensus 273 ~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~ 352 (549)
+++.++++++|++..+|..+..++...........+++. . .|++++++....+.+.+ +.++++.||+||++.++...
T Consensus 231 ~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~-~-~G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~ 307 (540)
T PRK13388 231 FLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRV-A-FGNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVRE 307 (540)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEE-E-ECCCCCHHHHHHHHHHh-CCceecccccccccceeecC
Confidence 999999999999999999999888765432222345663 3 36677888889999888 78999999999998766532
Q ss_pred cCcCCCCCCCccccccCCcEEE-----------EEcCCCCCcC-CCCCcceEEEe-cCCcccccCCCccccccccCCCCe
Q 008895 353 VGPDECRRWGSTGRLSAGLEAK-----------IVDPETGDSL-PPGKEGELSIR-GPTIMKGYVGEPEVTSATLLPDGW 419 (549)
Q Consensus 353 ~~~~~~~~~~~~G~~~~~~~~~-----------i~d~~~~~~~-~~g~~Gel~v~-g~~~~~gy~~~~~~~~~~~~~~~~ 419 (549)
. ....+++|+|++|+++. ++| ++++.+ +++..|||+++ |++++.||+++++.+.+.| .+||
T Consensus 308 ~----~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~ 381 (540)
T PRK13388 308 P----GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGM 381 (540)
T ss_pred C----CCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCc
Confidence 1 23457899999997653 333 334444 34678999998 9999999999999998888 5799
Q ss_pred eecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHH
Q 008895 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAE 499 (549)
Q Consensus 420 ~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~ 499 (549)
|+|||+|+++++|++++.||++|+||++|++|+|.+||++|.++|+|.+|+|++.++...++.+++++++.++...+.++
T Consensus 382 ~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~ 461 (540)
T PRK13388 382 YWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFDPDA 461 (540)
T ss_pred eeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888888888887776778889
Q ss_pred HHHHHHhc--CCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 500 IMEFVARQ--VSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 500 i~~~l~~~--l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
+.++++.+ |+++++|..++++++||+|++||++|++|+++..+..
T Consensus 462 l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~~ 508 (540)
T PRK13388 462 FAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWATG 508 (540)
T ss_pred HHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCCC
Confidence 99999864 9999999999999999999999999999999886553
No 54
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.6e-68 Score=658.86 Aligned_cols=487 Identities=21% Similarity=0.303 Sum_probs=427.7
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.++|..+++++ |+++|++++ ++++||+||+++++++|+.|.+ .|+++|++|+++++|++++++++|||++
T Consensus 3095 ~~~~~l~~~~a~~~----p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~vv~~lavl~ 3167 (3956)
T PRK12467 3095 RLVHQLIEAQVART----PEAPALVFG--DQQLSYAELNRRANRLAHRLIA-IGVGPDVLVGVAVERSVEMIVALLAVLK 3167 (3956)
T ss_pred ccHHHHHHHHHHhC----CCcceEeeC--CcccCHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999998 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-CCeEEEecCCchhhhhcccCCCccccccccCCCCEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (549)
+|++++|++|.++.+++.+++++++++++|++......+... ....+.++...... . ..........++++++
T Consensus 3168 aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~a~ 3241 (3956)
T PRK12467 3168 AGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDLNG-----Y-SENNPSTRVMGENLAY 3241 (3956)
T ss_pred hCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhhcc-----c-CCCCCcccCCCCceEE
Confidence 999999999999999999999999999999998776554322 22333333221110 0 1111223456789999
Q ss_pred EEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC--cCHHHHH
Q 008895 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FDLKMML 274 (549)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~ 274 (549)
++|||||||.||||+++|+++.+.+......+ ...++++++..+|++|..+.+.++.++..|+++++.+. +++..++
T Consensus 3242 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~ 3320 (3956)
T PRK12467 3242 VIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-ELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELW 3320 (3956)
T ss_pred EEEccCCCCCcceeeehhHHHHHHHHHHHHhc-CCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHH
Confidence 99999999999999999999999998877777 57789999999999999999999999999999998875 7899999
Q ss_pred HHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccC
Q 008895 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (549)
Q Consensus 275 ~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~ 354 (549)
+.|.++++|++.++|+++..+++... ...++++|.+++|||++++++.++|.+.++++.+++.||+||++..++....
T Consensus 3321 ~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 3398 (3956)
T PRK12467 3321 QAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKC 3398 (3956)
T ss_pred HHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEec
Confidence 99999999999999999999987542 3457889999999999999999999999888999999999999877654322
Q ss_pred cCC---CCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCC-------eeecCc
Q 008895 355 PDE---CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG-------WMRTGD 424 (549)
Q Consensus 355 ~~~---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~-------~~~TGD 424 (549)
... .....++|+|++|++++|+| +.+++++.|+.|||+|+|+++++||+++|+.|.++|..++ ||+|||
T Consensus 3399 ~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGD 3477 (3956)
T PRK12467 3399 GGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGD 3477 (3956)
T ss_pred ccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccch
Confidence 111 12336899999999999999 7789999999999999999999999999999999997654 599999
Q ss_pred eEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHH
Q 008895 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFV 504 (549)
Q Consensus 425 ~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l 504 (549)
+|++++||+++++||+|++||++|++|+|.|||++|.++|+|.+++|++..+ ..++.+++|++.........+++++++
T Consensus 3478 l~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~-~~~~~lva~v~~~~~~~~~~~~l~~~l 3556 (3956)
T PRK12467 3478 LARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARDG-AGGKQLVAYVVPADPQGDWRETLRDHL 3556 (3956)
T ss_pred hheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEecC-CCCcEEEEEEeCCCCCcccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998754 457789999998765556789999999
Q ss_pred HhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 505 ARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 505 ~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+++|+.|++|..|+++++||+|++|||||++|++....
T Consensus 3557 ~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3557 AASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred hccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCcc
Confidence 99999999999999999999999999999999987655
No 55
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=7.1e-68 Score=567.80 Aligned_cols=491 Identities=22% Similarity=0.294 Sum_probs=389.3
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEE-----CCCC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALIN-----SVTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~-----~~~~--~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v 110 (549)
.|+.++|.+.++++ |+++|+.. ...+ +.+||+||.++++++|++|.+ +|+++||+|+|+++|++++++
T Consensus 43 ~t~~~~l~~~~~~~----p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~~ 117 (660)
T PLN02861 43 DSPWQFFSDAVKKY----PNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-RGVNPGDRCGIYGSNCPEWII 117 (660)
T ss_pred CCHHHHHHHHHHhC----CCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 58999999999999 99999863 1112 479999999999999999998 999999999999999999999
Q ss_pred HHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC------CCe-EEEecCC--------------
Q 008895 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHR-TILIDSP-------------- 169 (549)
Q Consensus 111 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~~~~~~~-------------- 169 (549)
++|||+++|++++|+++.++.+++.+++++++++++|++......+... ..+ ++.++..
T Consensus 118 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 197 (660)
T PLN02861 118 AMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVS 197 (660)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcE
Confidence 9999999999999999999999999999999999999987655443221 122 3333321
Q ss_pred --chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCC----CCCCCcEEEEecCh
Q 008895 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP----KRVSPAVMLFTMPY 243 (549)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~----~~~~~~~~~~~~pl 243 (549)
.+.++...... ........++++++|+|||||||.||||++||+++++........+. ....+|++++.+|+
T Consensus 198 ~~~~~~~~~~~~~--~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 275 (660)
T PLN02861 198 CFSWEEFSLMGSL--DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPL 275 (660)
T ss_pred EEEHHHHHHhCcc--cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcH
Confidence 12222211110 11112345789999999999999999999999999988766544331 13578999999999
Q ss_pred hhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCC------------------------
Q 008895 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG------------------------ 299 (549)
Q Consensus 244 ~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~------------------------ 299 (549)
+|.+++...+.++..|+++++. .+++..+++.|++++||+++++|.++..+.+..
T Consensus 276 ~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 354 (660)
T PLN02861 276 AHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLG 354 (660)
T ss_pred HHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999986666788999998877 468899999999999999999999998876410
Q ss_pred -------------CCCCC-------CC-CCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCC
Q 008895 300 -------------STDGY-------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (549)
Q Consensus 300 -------------~~~~~-------~l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~ 358 (549)
..... .+ .++|.+++||+++++++.+ |.+.++...+++.||+||+++.++..... ..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~ 432 (660)
T PLN02861 355 NLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIAN-VF 432 (660)
T ss_pred HHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecccc-cC
Confidence 00000 01 4789999999999999754 66666455799999999998765543221 22
Q ss_pred CCCCccccccCCcEEEEEcC-CCC-CcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEE
Q 008895 359 RRWGSTGRLSAGLEAKIVDP-ETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFI 436 (549)
Q Consensus 359 ~~~~~~G~~~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~ 436 (549)
...+++|+|+++++++|+|. +.+ ..++.+..|||+|+|++++.|||++|+.|.+.| .+|||+|||+|++|+||++++
T Consensus 433 ~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~i 511 (660)
T PLN02861 433 SMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFHTGDIGEWQPNGAMKI 511 (660)
T ss_pred CCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCcccCceEEECCCCcEEE
Confidence 34689999999999999983 333 344566789999999999999999999999999 589999999999999999999
Q ss_pred EcccCCeeee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCC--------C--CCCH--------
Q 008895 437 VDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPH--------S--SLNE-------- 497 (549)
Q Consensus 437 ~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~--------~--~~~~-------- 497 (549)
.||+||+||+ +|++|+|.+||++|.+||.|.+++|++.+ .++.++++|++... . ..+.
T Consensus 512 ~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~ 588 (660)
T PLN02861 512 IDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLK 588 (660)
T ss_pred EeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHH
Confidence 9999999997 79999999999999999999999999875 24678999987532 0 0111
Q ss_pred --HHHHHHHHh-----cCCCCCcccEEEEe-Ccc-----CCCCCCcccHHHHHcccCc
Q 008895 498 --AEIMEFVAR-----QVSPYKKIRRVAFI-NAI-----PKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 498 --~~i~~~l~~-----~l~~~~~p~~i~~v-~~l-----P~t~~GKv~r~~l~~~~~~ 542 (549)
..+.+.+++ .+..+.+++.+.+. +++ .+|+++|+.|+.+.+.|.+
T Consensus 589 ~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02861 589 ARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKD 646 (660)
T ss_pred HHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHH
Confidence 224444443 48899999988885 467 8999999999999988754
No 56
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=5.7e-67 Score=550.02 Aligned_cols=485 Identities=26% Similarity=0.376 Sum_probs=418.1
Q ss_pred HHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcC
Q 008895 40 AVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLG 119 (549)
Q Consensus 40 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G 119 (549)
+.+.+...++++ |+++|+.+. ++.+||+||.+++.++|++|++ .|+.+|++|+++++|+.++++++|||+++|
T Consensus 2 ~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 2 LHHLLEDAAARL----PDATALVHH--DRTLTYAALSERVLALASGLRG-LGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred HHHHHHHHHHHC----CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 677888888888 999999987 7899999999999999999998 899999999999999999999999999999
Q ss_pred CeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----C-CeEEEecCC-----------chhhhhcccCCCc
Q 008895 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----K-HRTILIDSP-----------EFDSMTMSWNSKH 182 (549)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~-~~~~~~~~~-----------~~~~~~~~~~~~~ 182 (549)
++++|+++..+.+++..+++.+++++++++......+... . ...+.++.. .|+.+.....
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 151 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGD--- 151 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhcccc---
Confidence 9999999999999999999999999999987765543321 1 123333321 2222221111
Q ss_pred cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEE
Q 008895 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETA 262 (549)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~ 262 (549)
.........++.++++|||||||.||+|.++|+++..+.......+ ....++++++.+|++|.+++...+.++..|+++
T Consensus 152 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~ 230 (515)
T TIGR03098 152 ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATV 230 (515)
T ss_pred ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-CCCcccEEEEECchhhHhHHHHHHHHHHcCCEE
Confidence 1111223457899999999999999999999999998887766665 467789999999999999998889999999999
Q ss_pred EEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCc
Q 008895 263 VVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (549)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~ 342 (549)
++.+.+++..+++.++++++|++.++|+++..+.+... ....++++|.+++||+++++++.+.+++.+++..+++.||+
T Consensus 231 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~ 309 (515)
T TIGR03098 231 VLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGL 309 (515)
T ss_pred EEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeecc
Confidence 99988999999999999999999999999999886532 22457899999999999999999999999988899999999
Q ss_pred cccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC------
Q 008895 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------ 416 (549)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~------ 416 (549)
||++...... ........+++|+|++++.++|+| ++++.++.|+.|||+++|+.++.||+++++.+...|.+
T Consensus 310 tE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~ 387 (515)
T TIGR03098 310 TEAFRSTYLP-PEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPG 387 (515)
T ss_pred ccccceEecc-cccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccc
Confidence 9987654332 222234567999999999999999 67889999999999999999999999999887766543
Q ss_pred -----CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCC
Q 008895 417 -----DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQP 491 (549)
Q Consensus 417 -----~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~ 491 (549)
++||+|||+|+++++|++++.||.+|+|+++|.+|+|.+||++|.++|.|.+++|++.+++..++.++++++...
T Consensus 388 ~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~ 467 (515)
T TIGR03098 388 ELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPG 467 (515)
T ss_pred cccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCC
Confidence 248999999999999999999999999999999999999999999999999999999999888899999988766
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHc
Q 008895 492 HSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRK 538 (549)
Q Consensus 492 ~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~ 538 (549)
....+.+++.++++++|+++++|..++++++||+|++||++|++|++
T Consensus 468 ~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 468 GEELDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred CCCCCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 66678899999999999999999999999999999999999999975
No 57
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.6e-67 Score=553.90 Aligned_cols=494 Identities=28% Similarity=0.460 Sum_probs=419.3
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+++.++++++ |+++|+++. +++++||+||+++++++|++|++ .|+++||+|+++++|+++++++++||++
T Consensus 23 ~~l~~~~~~~~~~~----pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~-~G~~~gd~V~i~~~n~~~~~~~~lA~~~ 96 (547)
T PRK06087 23 ASLADYWQQTARAM----PDKIAVVDN-HGASYTYSALDHAASRLANWLLA-KGIEPGDRVAFQLPGWCEFTIIYLACLK 96 (547)
T ss_pred CCHHHHHHHHHHHC----CCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57999999999999 999999875 35799999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc-----HHHHh----cC-CC-eEEEecCC-------chhhhhcccC
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKLA----KL-KH-RTILIDSP-------EFDSMTMSWN 179 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~~-~~-~~~~~~~~-------~~~~~~~~~~ 179 (549)
+|++++|++|..+.+++..+++.+++++++++... .+.+. .. .. .++.++.. .+.++.....
T Consensus 97 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (547)
T PRK06087 97 VGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYE 176 (547)
T ss_pred cCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCC
Confidence 99999999999999999999999999999997532 11111 11 11 23333221 1112111111
Q ss_pred CCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhh
Q 008895 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (549)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~ 258 (549)
. .........+++++++|||||||.||+|.++|.++........... ...++++++..+|++|.+|+ ...+.++..
T Consensus 177 ~--~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 253 (547)
T PRK06087 177 P--LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-NLTWQDVFMMPAPLGHATGFLHGVTAPFLI 253 (547)
T ss_pred c--ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeEEEecchHHHHHHHHHHHHHHhc
Confidence 0 0111234568899999999999999999999999988777665555 46788999999999999988 556788889
Q ss_pred ccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEc
Q 008895 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (549)
Q Consensus 259 g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~ 338 (549)
|+++++.+.+++..+++.|+++++++++.+|+.+..++.........++++|.+++||+++++++.+.+.+. ++++++
T Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~ 331 (547)
T PRK06087 254 GARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLS 331 (547)
T ss_pred CCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE
Confidence 999999999999999999999999999998888877777665555678899999999999999999988775 889999
Q ss_pred ccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 008895 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (549)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~ 418 (549)
.||+||++.+.+...........+++|+|++++.++++| +++.+++.|+.|||+++|+.++.||+++++.+...+..++
T Consensus 332 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g 410 (547)
T PRK06087 332 VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEG 410 (547)
T ss_pred EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCCC
Confidence 999999987765432222222346789999999999999 7788999999999999999999999999999988887889
Q ss_pred eeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCC-CCCCCH
Q 008895 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQP-HSSLNE 497 (549)
Q Consensus 419 ~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~-~~~~~~ 497 (549)
||+|||+++++++|++++.||.+|+|+.+|++|+|.+||++|..+|+|.+++|++.+++..++.++++++..+ ....+.
T Consensus 411 ~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~ 490 (547)
T PRK06087 411 WYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLTL 490 (547)
T ss_pred CcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999998888899999998765 345677
Q ss_pred HHHHHHHH-hcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 498 AEIMEFVA-RQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 498 ~~i~~~l~-~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
+++.+++. +.++++++|..|.++++||+|.+||++|++|++++.+.
T Consensus 491 ~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~ 537 (547)
T PRK06087 491 EEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRR 537 (547)
T ss_pred HHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHH
Confidence 88999885 57999999999999999999999999999999888654
No 58
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-67 Score=561.64 Aligned_cols=512 Identities=19% Similarity=0.215 Sum_probs=402.0
Q ss_pred CCceeccCCCCCCCCCCCCCCCHHHHHhhcccCCCCCCCCCcEEEECCCC---ceecHHHHHHHHHHHHHHhHHh--cCC
Q 008895 18 ATKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTG---LRVSFSEFTRRTNSLASYLQNV--TRL 92 (549)
Q Consensus 18 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~---~~~Ty~el~~~a~~~A~~L~~~--~g~ 92 (549)
...+|+........+. ...-++.++|.+.++++ |+++|+++...+ +.+||+||.++++++|++|.+. +|+
T Consensus 42 ~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~----p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv 116 (746)
T PTZ00342 42 ESSVYCMKDHKKKSSL-YVYKHIMKLLLEKYKLN----NNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGI 116 (746)
T ss_pred CCCceecCchhhcccc-cccchHHHHHHHHHhhc----CCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3457766665444332 22469999999999999 999999864223 6899999999999999999972 499
Q ss_pred CCC-----------CEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC--
Q 008895 93 SKN-----------DTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-- 159 (549)
Q Consensus 93 ~~g-----------~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-- 159 (549)
++| |+|+|+++|+++|+++++||+++|++.||+++.++.+++.++|+++++++++++.+..+.+.+.
T Consensus 117 ~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~ 196 (746)
T PTZ00342 117 PEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN 196 (746)
T ss_pred CcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc
Confidence 999 9999999999999999999999999999999999999999999999999999987766655421
Q ss_pred ---CC-eEEEecCCchh--------------------------------------------------------hhhcccC
Q 008895 160 ---KH-RTILIDSPEFD--------------------------------------------------------SMTMSWN 179 (549)
Q Consensus 160 ---~~-~~~~~~~~~~~--------------------------------------------------------~~~~~~~ 179 (549)
.. .++.++..... ++.....
T Consensus 197 ~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 276 (746)
T PTZ00342 197 ELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAK 276 (746)
T ss_pred cCCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhh
Confidence 11 24444321100 0000000
Q ss_pred ---------------CCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCC-CCCCCcEEEEecCh
Q 008895 180 ---------------SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-KRVSPAVMLFTMPY 243 (549)
Q Consensus 180 ---------------~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~pl 243 (549)
...........++++++|+|||||||.||||++||+++++.+........ .....++.++.+|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL 356 (746)
T PTZ00342 277 KLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPI 356 (746)
T ss_pred cCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcH
Confidence 00000112346789999999999999999999999999988766543221 12345899999999
Q ss_pred hhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhC--------CCCCC------------
Q 008895 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKG--------GSTDG------------ 303 (549)
Q Consensus 244 ~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~--------~~~~~------------ 303 (549)
+|++++...+.++..|+++++... ++..+++.|.+++||+++++|.++..+.+. .....
T Consensus 357 ~Hi~~~~~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 435 (746)
T PTZ00342 357 SHIYERVIAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKS 435 (746)
T ss_pred HHHHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999999777888999999988765 889999999999999999999999888652 10000
Q ss_pred ----------------------CCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCC
Q 008895 304 ----------------------YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRW 361 (549)
Q Consensus 304 ----------------------~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~ 361 (549)
.-.+++|.+++||+++++++.++|+..+ ++.+.+.||+||+++.++... ......
T Consensus 436 ~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~--~~~~~~ 512 (746)
T PTZ00342 436 NNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQH--ADDNNT 512 (746)
T ss_pred hhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeecc--CCCCCc
Confidence 0026899999999999999999999988 789999999999977655432 223466
Q ss_pred Ccccccc-CCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEccc
Q 008895 362 GSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRL 440 (549)
Q Consensus 362 ~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~ 440 (549)
+++|+|+ |+++++|+|.++......+..|||+++||+++.|||++|+.|.+.|+.+|||+|||+|++|++|+++++||+
T Consensus 513 gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~ 592 (746)
T PTZ00342 513 ESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRS 592 (746)
T ss_pred ccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccC
Confidence 8999998 999999998655444455567999999999999999999999999988999999999999999999999999
Q ss_pred CCeeee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCC--------------CCC---CH-----
Q 008895 441 KDLIKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPH--------------SSL---NE----- 497 (549)
Q Consensus 441 ~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~--------------~~~---~~----- 497 (549)
||+||+ +|++|+|.+||++|.+||.|.+|+|++.. ....++|+|++... ... +.
T Consensus 593 kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~---~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~ 669 (746)
T PTZ00342 593 KGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDD---SMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLT 669 (746)
T ss_pred CCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccC---CccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhh
Confidence 999997 79999999999999999999999999753 23467888886531 000 10
Q ss_pred ------HH----HHHHH-----HhcCCCCCcccEEEEeC-cc----CCCCCCcccHHHHHcccC
Q 008895 498 ------AE----IMEFV-----ARQVSPYKKIRRVAFIN-AI----PKSAAGKILRMELRKVAV 541 (549)
Q Consensus 498 ------~~----i~~~l-----~~~l~~~~~p~~i~~v~-~l----P~t~~GKv~r~~l~~~~~ 541 (549)
.+ +.+.+ +..|..+.+++.|.++. ++ -+||+.|+.|+.+.+.|.
T Consensus 670 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~ 733 (746)
T PTZ00342 670 DETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYA 733 (746)
T ss_pred hhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHH
Confidence 11 12222 22599999999888873 33 279999999999998765
No 59
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-66 Score=551.85 Aligned_cols=492 Identities=31% Similarity=0.481 Sum_probs=409.1
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|.+.++++ |+++|+++. ++++||.||.++++++|++|.+..|+++||+|+++++|++++++++|||++
T Consensus 24 ~~~~~~l~~~~~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~ 97 (562)
T PRK12492 24 KSVVEVFERSCKKF----ADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALR 97 (562)
T ss_pred CcHHHHHHHHHHhC----CCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 58999999999888 999999876 789999999999999999999734999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCe-EEEec-------------------------
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILID------------------------- 167 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~------------------------- 167 (549)
+|++++|+++..+.+++.+++++++++++++++...+..... ... .+...
T Consensus 98 ~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (562)
T PRK12492 98 AGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVP 177 (562)
T ss_pred cCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhccccccccccccc
Confidence 999999999999999999999999999999976543332211 000 00000
Q ss_pred ------CCchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCC--------CC-
Q 008895 168 ------SPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK--------RV- 232 (549)
Q Consensus 168 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--------~~- 232 (549)
...|+......... .........+++++++|||||||.||+|+++|+++..+.......+.. ..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (562)
T PRK12492 178 AYHLPQAVPFKQALRQGRGL-SLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKE 256 (562)
T ss_pred ccCCcccccHHHHHhccCCC-CCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccC
Confidence 00011111100000 011123456789999999999999999999999997766554332210 11
Q ss_pred CCcEEEEecChhhHHHH-HHHHHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCce
Q 008895 233 SPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLE 310 (549)
Q Consensus 233 ~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr 310 (549)
..++++..+|++|.+++ ...+..+..|...+... ++++..+++.++++++|+++++|+++..++........+++++|
T Consensus 257 ~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr 336 (562)
T PRK12492 257 GQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALK 336 (562)
T ss_pred CCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccccccccee
Confidence 23577889999999998 44556667777766654 56889999999999999999999999999887665556788999
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcc
Q 008895 311 TVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEG 390 (549)
Q Consensus 311 ~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~G 390 (549)
.+++||+++++++.+++.+.+ ++++++.||+||++.++..... ......+++|+|++++.++|+| +++.+++.|+.|
T Consensus 337 ~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~G 413 (562)
T PRK12492 337 LTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPY-GELARLGTVGIPVPGTALKVID-DDGNELPLGERG 413 (562)
T ss_pred EEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCC-cccccCCccceecCCCEEEEEC-CCCCCCCCCCce
Confidence 999999999999999999987 7899999999999876654322 2223457899999999999999 578899999999
Q ss_pred eEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEE
Q 008895 391 ELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAA 470 (549)
Q Consensus 391 el~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~ 470 (549)
||+|+|+.++.||+++++.+...|..++||+|||+|+++++|.+++.||.||+++++|++|+|.+||++|.++|.|.+++
T Consensus 414 el~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~ 493 (562)
T PRK12492 414 ELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCA 493 (562)
T ss_pred EEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEE
Confidence 99999999999999999999988877899999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 471 VIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 471 vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
|++.++...++.++++++..+. ..+.+++.++++++|+.+++|..+.++++||+|++||++|++|++++
T Consensus 494 v~~~~~~~~~~~~~~~v~~~~~-~~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~~ 562 (562)
T PRK12492 494 AIGVPDERSGEAVKLFVVARDP-GLSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELRDIA 562 (562)
T ss_pred EEeccCCCCCceEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHHhhC
Confidence 9999888778888888886543 35778999999999999999999999999999999999999999864
No 60
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-66 Score=551.04 Aligned_cols=508 Identities=26% Similarity=0.424 Sum_probs=419.2
Q ss_pred ceeccCCCC-CCCC-CCCCCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCE
Q 008895 20 KTFHSLRPP-IDLP-PEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDT 97 (549)
Q Consensus 20 ~~~~~~~~~-~~~p-~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~ 97 (549)
++|...+++ .+.. ....+.++.+.|...++++ |+++|+++. +..+||.||.++++++|.+|.+ .|+++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~a~~~----p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~-~gi~~gd~ 75 (557)
T PRK07059 3 KIWLKSYPPGVPAEIDASQYPSLADLLEESFRQY----ADRPAFICM--GKAITYGELDELSRALAAWLQS-RGLAKGAR 75 (557)
T ss_pred CCccccCCCCCCCccCCCCCCCHHHHHHHHHHHc----CCCceEEEc--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCE
Confidence 456666555 2211 1123358999999999999 999999987 7899999999999999999999 89999999
Q ss_pred EEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCe-EEEecC----
Q 008895 98 AFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDS---- 168 (549)
Q Consensus 98 V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~---- 168 (549)
|+++++|++++++++|||+++|++++|++|..+.+++.++++.++++++++++.....+... ... ++....
T Consensus 76 V~i~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (557)
T PRK07059 76 VAIMMPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLL 155 (557)
T ss_pred EEEECCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccc
Confidence 99999999999999999999999999999999999999999999999999988765544321 111 111100
Q ss_pred --------------------------CchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHH
Q 008895 169 --------------------------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVA 222 (549)
Q Consensus 169 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~ 222 (549)
..+.+...... ..........++++++++|||||||.||+|+++|.+++.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~ 234 (557)
T PRK07059 156 GFKGHIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGA-RQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVL 234 (557)
T ss_pred cccccccccccccccccccccCCCCcccHHHHhhccC-CCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHH
Confidence 00111111100 001112334678999999999999999999999999987654
Q ss_pred HhhccCC------CCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHH
Q 008895 223 SSFASSP------KRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (549)
Q Consensus 223 ~~~~~~~------~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~ 294 (549)
....... .......+++.+|++|.+++ ...+.++..|++.++.+ ..++..+++.++++++|++.++|.++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ 314 (557)
T PRK07059 235 QMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNA 314 (557)
T ss_pred HHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHH
Confidence 3322210 01123567788999999887 45567777787766665 4688999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEE
Q 008895 295 MSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAK 374 (549)
Q Consensus 295 l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 374 (549)
+..........++++|.++.||+++++.+.++|.+.+ ++++++.||+||++.++...... .....+++|.|+++++++
T Consensus 315 l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~ 392 (557)
T PRK07059 315 LLNNPDFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVS 392 (557)
T ss_pred HHcCcCcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCC-CCCcCCcccCccCCcEEE
Confidence 9887665556688999999999999999999999988 78999999999998876553322 223457899999999999
Q ss_pred EEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChH
Q 008895 375 IVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPA 454 (549)
Q Consensus 375 i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~ 454 (549)
|+| +++++++.|+.|||+++|+.++.||+++++.+...|..+|||+|||+|+++++|.+++.||++|+++++|++|+|.
T Consensus 393 i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~ 471 (557)
T PRK07059 393 IRD-DDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPN 471 (557)
T ss_pred EEC-CCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHH
Confidence 999 6789999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHH
Q 008895 455 ELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRM 534 (549)
Q Consensus 455 ~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~ 534 (549)
+||++|.++++|.+++|++.++...++.++++++..+ ...+.++++++++++|+.+++|..+.+++++|+|++||++|+
T Consensus 472 ~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~-~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~ 550 (557)
T PRK07059 472 EIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKD-PALTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRR 550 (557)
T ss_pred HHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCC-CCCCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHH
Confidence 9999999999999999999988888888999888654 346778999999999999999999999999999999999999
Q ss_pred HHHcc
Q 008895 535 ELRKV 539 (549)
Q Consensus 535 ~l~~~ 539 (549)
.|+++
T Consensus 551 ~L~~~ 555 (557)
T PRK07059 551 ELRDG 555 (557)
T ss_pred HHHhh
Confidence 99875
No 61
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.9e-67 Score=562.43 Aligned_cols=493 Identities=23% Similarity=0.344 Sum_probs=396.1
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v 110 (549)
.|+.+++.++++++ |+++|+++.. ..+.+||+||.++++++|++|.+ . +++||+|+++++|++++++
T Consensus 34 ~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~V~l~~~n~~e~~~ 107 (612)
T PRK12476 34 TTLISLIERNIANV----GDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ-V-AGPGDRVAILAPQGIDYVA 107 (612)
T ss_pred CcHHHHHHHHHHhC----CCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEECCCChhHHH
Confidence 78999999988888 9999998631 12489999999999999999998 5 8999999999999999999
Q ss_pred HHHHHHHcCCeEccC-CCCCC--HHHHHHHHhhcCCeEEEEcCccHHHHhc----CC----CeEEEecCCchhhhhcccC
Q 008895 111 LYFSLLSLGVIISPA-NPVNT--ESEISRQIQLSNPVIAFATSSVVHKLAK----LK----HRTILIDSPEFDSMTMSWN 179 (549)
Q Consensus 111 ~~la~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~ 179 (549)
++|||+++|++++|+ ++.++ .+++.+++++++++++|+++.....+.. .. ..++.++.. . ....
T Consensus 108 ~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~~~ 182 (612)
T PRK12476 108 GFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAI--P---DSAG 182 (612)
T ss_pred HHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccc--c---cccc
Confidence 999999999999999 57766 7899999999999999998876554321 11 123333211 0 0000
Q ss_pred CCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhc
Q 008895 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALM 259 (549)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g 259 (549)
. ........++++++++|||||||.||||.++|+++.++.......+....++++.++.+|++|.+|+...+.++..|
T Consensus 183 -~-~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~g 260 (612)
T PRK12476 183 -E-SFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYG 260 (612)
T ss_pred -c-cccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHHHHHhcC
Confidence 0 11112245689999999999999999999999999877665544442246778999999999999996666665666
Q ss_pred cEEEEecC--c--CHHHHHHHHH--HhceeeeeecHHHHHHHHhCCC----CCCCCCCCceEEEEecCCCCHHHHHHHHH
Q 008895 260 ETAVVMQR--F--DLKMMLKAVE--EFRVTHAAVTPPIVVAMSKGGS----TDGYDLSSLETVACGAAPLGKDTIMAFAS 329 (549)
Q Consensus 260 ~~~~~~~~--~--~~~~~~~~l~--~~~~t~l~~~P~~l~~l~~~~~----~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~ 329 (549)
+..++..+ + ++..+++.+. +++++.++.+|+++..++.... ....+++++| +++||+++++++.+++.+
T Consensus 261 g~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~ 339 (612)
T PRK12476 261 GHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNK 339 (612)
T ss_pred CeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHHH
Confidence 66666543 3 8899999995 4899999999998887766421 1244678999 999999999999999999
Q ss_pred hCC-----CCcEEcccCccccccceecccCcC-------------------------CCCCCCccccccCCcEEEEEcCC
Q 008895 330 KFP-----KVVLVQAYGLTESTAGVFRTVGPD-------------------------ECRRWGSTGRLSAGLEAKIVDPE 379 (549)
Q Consensus 330 ~~~-----~~~l~~~yG~tE~~~~~~~~~~~~-------------------------~~~~~~~~G~~~~~~~~~i~d~~ 379 (549)
.|+ ...+++.||+||++..+....... .....+++|+|+++++++|+|++
T Consensus 340 ~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~ 419 (612)
T PRK12476 340 AFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPD 419 (612)
T ss_pred HHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCC
Confidence 872 245899999999876544321110 00122578999999999999966
Q ss_pred CCCcCCCCCcceEEEecCCcccccCCCccccccccCC------------------CCeeecCceEEEecCCeEEEEcccC
Q 008895 380 TGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------------------DGWMRTGDLCYIDEDGFLFIVDRLK 441 (549)
Q Consensus 380 ~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~------------------~~~~~TGD~~~~~~~g~~~~~GR~~ 441 (549)
++++++.|+.|||+++|++++.||+++++.|...|.. ++||+|||+|++ .+|++++.||+|
T Consensus 420 ~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~ 498 (612)
T PRK12476 420 TGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-LDGELYITGRIA 498 (612)
T ss_pred CCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee-ECCEEEEEeccC
Confidence 6999999999999999999999999999999888741 359999999998 499999999999
Q ss_pred CeeeeCcEeeChHHHHHHHHc-CCCcce--EEEEeecCCCCCceeEEEEEeCCCC-CCCHHHHHHHHHhcCC-CCCc-cc
Q 008895 442 DLIKYKGYQVAPAELEHLLLS-HREVAD--AAVIPYPDEEAGQMPMAFVVRQPHS-SLNEAEIMEFVARQVS-PYKK-IR 515 (549)
Q Consensus 442 d~i~~~G~~v~~~~IE~~l~~-~~~v~~--~~vv~~~~~~~~~~~~~~v~~~~~~-~~~~~~i~~~l~~~l~-~~~~-p~ 515 (549)
|+||++|++|+|.+||++|.+ ||.|.+ +++++++++. ++.++++++..++. ..+.++|.+++++++. .+++ |.
T Consensus 499 d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~ 577 (612)
T PRK12476 499 DLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRADPAPAIDAIRAAVSRRHGLAVA 577 (612)
T ss_pred cEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccccHHHHHHHHHHHHHHhhCCcce
Confidence 999999999999999999985 899999 6777777766 78889999887654 3577889999999887 4777 57
Q ss_pred EEEEeC--ccCCCCCCcccHHHHHcccCcCCCC
Q 008895 516 RVAFIN--AIPKSAAGKILRMELRKVAVPSGSS 546 (549)
Q Consensus 516 ~i~~v~--~lP~t~~GKv~r~~l~~~~~~~~~~ 546 (549)
.+.+++ +||+|++|||+|++|++++.+++++
T Consensus 578 ~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 610 (612)
T PRK12476 578 DVRLVPAGAIPRTTSGKLARRACRAQYLDGRLG 610 (612)
T ss_pred EEEEECCCCcCcCCchHHHHHHHHHHHHcCCCC
Confidence 888886 6999999999999999999988765
No 62
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.8e-67 Score=549.09 Aligned_cols=497 Identities=27% Similarity=0.409 Sum_probs=426.6
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.|+.+++.+.++++ |+++|+++. ++.+||.||.++++++|..|.+ .|+++|++|+++++|+++++++++||++
T Consensus 12 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~~~~V~i~~~~~~~~~~~~la~~~ 84 (524)
T PRK06188 12 ATYGHLLVSALKRY----PDRPALVLG--DTRLTYGQLADRISRYIQAFEA-LGLGTGDAVALLSLNRPEVLMAIGAAQL 84 (524)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEEC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 69999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCc-cHHHHhc----C-C-CeEEEecCC-chhhhhcccCC-Cccccccc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSS-VVHKLAK----L-K-HRTILIDSP-EFDSMTMSWNS-KHELDRAK 188 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~----~-~-~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~ 188 (549)
+|++++|++|..+.+.+..+++.++++.+++++. ....... . . ...+.+... ...++...... ........
T Consensus 85 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (524)
T PRK06188 85 AGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAKFGPAPLVAA 164 (524)
T ss_pred hCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhccCccccccc
Confidence 9999999999999999999999999999999876 3332221 1 1 112222211 11111111100 00111122
Q ss_pred cCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCc
Q 008895 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRF 268 (549)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~ 268 (549)
..++++++++|||||||.||+|.++|.++..........+ ....++++++.+|++|.+++. .+.++..|+++++.+.+
T Consensus 165 ~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~~~ 242 (524)
T PRK06188 165 ALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-EWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVLAKF 242 (524)
T ss_pred CCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEcCCC
Confidence 3456699999999999999999999999998888777666 467889999999999988874 56778899999999999
Q ss_pred CHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccc
Q 008895 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (549)
Q Consensus 269 ~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~ 348 (549)
++..+++.++++++|+++++|+++..+++........++++|.+++||++++++..+.+.+.+ +..+++.||+||++..
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 321 (524)
T PRK06188 243 DPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMV 321 (524)
T ss_pred CHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCc
Confidence 999999999999999999999999999988776666789999999999999999999998888 6779999999999765
Q ss_pred eecccCcC----CCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCc
Q 008895 349 VFRTVGPD----ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGD 424 (549)
Q Consensus 349 ~~~~~~~~----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD 424 (549)
+....... .....+++|+|++++.++|+| +++++++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD 399 (524)
T PRK06188 322 ITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGD 399 (524)
T ss_pred eeecCchhccccccccCCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceeecc
Confidence 55432211 123456899999999999999 558899999999999999999999999999988887 589999999
Q ss_pred eEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHH
Q 008895 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFV 504 (549)
Q Consensus 425 ~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l 504 (549)
+|+++++|.+++.||.+++++++|++|+|.+||++|.++++|.+++|++.++...++.+++++++.+....+.+++.+++
T Consensus 400 l~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 479 (524)
T PRK06188 400 VAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQAHV 479 (524)
T ss_pred eEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887778899999998876667789999999
Q ss_pred HhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCCC
Q 008895 505 ARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGSS 546 (549)
Q Consensus 505 ~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 546 (549)
+++++.+++|..|+++++||+|++||++|++|++++.++.+.
T Consensus 480 ~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~~~~ 521 (524)
T PRK06188 480 KERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEGRGR 521 (524)
T ss_pred HHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999777653
No 63
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-66 Score=551.41 Aligned_cols=497 Identities=32% Similarity=0.500 Sum_probs=419.1
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+++...++++ |+++|+++. ++.+||.||.+++.++|++|.+ .|+++||+|+++++|+.++++++|||++
T Consensus 24 ~~~~~~~~~~a~~~----p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 96 (563)
T PRK06710 24 QPLHKYVEQMASRY----PEKKALHFL--GKDITFSVFHDKVKRFANYLQK-LGVEKGDRVAIMLPNCPQAVIGYYGTLL 96 (563)
T ss_pred ccHHHHHHHHHHHC----CCceEEEec--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 47899999999989 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCeEEEec-CCc----------------------
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILID-SPE---------------------- 170 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~-~~~---------------------- 170 (549)
+|++++|++|.++.+++.++++.++++++++++......... ....+.+. ...
T Consensus 97 ~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (563)
T PRK06710 97 AGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVV 176 (563)
T ss_pred cCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccc
Confidence 999999999999999999999999999999987654433211 01111110 000
Q ss_pred ----------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC-CCCCCCcEEEE
Q 008895 171 ----------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-PKRVSPAVMLF 239 (549)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~ 239 (549)
+....... ...........++.++++|||||||.||+|.++|+++..+........ .....++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 177 KVSESETIHLWNSVEKEV--NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred cccccchhhhhhhhhhcc--ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 00000000 000001112346899999999999999999999999976544333322 22344568899
Q ss_pred ecChhhHHHH-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCC
Q 008895 240 TMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAP 318 (549)
Q Consensus 240 ~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~ 318 (549)
.+|++|.+++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..++.........++++|.+++||++
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~ 334 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAP 334 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCc
Confidence 9999999988 445578889999999888899999999999999999999999999988665555567899999999999
Q ss_pred CCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCC
Q 008895 319 LGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPT 398 (549)
Q Consensus 319 l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~ 398 (549)
+++++.+++.+.+ +..+++.||+||++.++..... ......+++|++.+++.++++|++++.+++.|+.|||+++|+.
T Consensus 335 ~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~ 412 (563)
T PRK06710 335 LPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFL-WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQ 412 (563)
T ss_pred CCHHHHHHHHHhh-CCCEecccccccCccccccCcc-cccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCc
Confidence 9999999999988 7889999999999876543221 1223456899999999999999888999999999999999999
Q ss_pred cccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCC
Q 008895 399 IMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEE 478 (549)
Q Consensus 399 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~ 478 (549)
++.||+++++.+...| .+|||+|||+++++++|.+++.||.||+|+++|.+|+|.+||++|.++|.|.+++|++.++..
T Consensus 413 ~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~ 491 (563)
T PRK06710 413 IMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPY 491 (563)
T ss_pred cchhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCC
Confidence 9999999999988777 589999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCCC
Q 008895 479 AGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGSS 546 (549)
Q Consensus 479 ~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 546 (549)
.++.++++++..++...+.+++.++++++++.+++|..+.++++||+|++||++|++|++++..++.+
T Consensus 492 ~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 559 (563)
T PRK06710 492 RGETVKAFVVLKEGTECSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKNED 559 (563)
T ss_pred cCceeEEEEEECCCCCCCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcCcc
Confidence 88899999998877667889999999999999999999999999999999999999999999877653
No 64
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=2.7e-67 Score=608.43 Aligned_cols=485 Identities=19% Similarity=0.268 Sum_probs=416.8
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|.++++++ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++++.+++++++||++
T Consensus 458 ~~l~~~~~~~~~~~----p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~g~~V~l~~~~~~~~i~~~la~~~ 530 (1296)
T PRK10252 458 TTLSALVAQQAAKT----PDAPALADA--RYQFSYREMREQVVALANLLRE-RGVKPGDSVAVALPRSVFLTLALHAIVE 530 (1296)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 68999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCC-CeEEEecCCchhhhhcccCCCccccccccCCCCEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-HRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (549)
+|++++|++|+++.+++.++++.++++++|++......+.... ......+ ....... ........++++++
T Consensus 531 ~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~a~ 602 (1296)
T PRK10252 531 AGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYN-----APLAPQG---AAPLQLSQPHHTAY 602 (1296)
T ss_pred hCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeecc-----ccccccc---CCCCCCCCCCCeEE
Confidence 9999999999999999999999999999999987665554321 1111111 1000000 11112235789999
Q ss_pred EEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEec---CcCHHHH
Q 008895 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (549)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~---~~~~~~~ 273 (549)
++|||||||.||||+++|+++.+.+.+....+ ...+.++++..+|++|..+++.++.++..|+++++.+ ..++..+
T Consensus 603 i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~ 681 (1296)
T PRK10252 603 IIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-PLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAM 681 (1296)
T ss_pred EEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHH
Confidence 99999999999999999999999988877777 4678899999999999999988999999999999976 3688999
Q ss_pred HHHHHHhceeeeeecHHHHHHHHhCCCCCC--CCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceec
Q 008895 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDG--YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFR 351 (549)
Q Consensus 274 ~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~--~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~ 351 (549)
++.|+++++|++.++|+++..+++...... ..++++|.+++|||++++++.+.|.+.+ ++++++.||+||++..+..
T Consensus 682 ~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~ 760 (1296)
T PRK10252 682 QQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSW 760 (1296)
T ss_pred HHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeee
Confidence 999999999999999999998887643322 3468999999999999999999999887 7899999999999876654
Q ss_pred ccCcCC-----CCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCC------Cee
Q 008895 352 TVGPDE-----CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD------GWM 420 (549)
Q Consensus 352 ~~~~~~-----~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~------~~~ 420 (549)
...... .....++|+|++++.++|+| +.+++++.|+.|||+|+|++++.||+++++.|...|..+ +||
T Consensus 761 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y 839 (1296)
T PRK10252 761 YPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMY 839 (1296)
T ss_pred eecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEE
Confidence 322211 22346799999999999999 789999999999999999999999999999999988654 399
Q ss_pred ecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeec----C--CCCCceeEEEEEeCCCCC
Q 008895 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYP----D--EEAGQMPMAFVVRQPHSS 494 (549)
Q Consensus 421 ~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~----~--~~~~~~~~~~v~~~~~~~ 494 (549)
+|||+|+++++|.++++||+|++||++|++|++.|||++|.++|+|.+++|+... + ......++++++...+..
T Consensus 840 ~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~ 919 (1296)
T PRK10252 840 RTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLP 919 (1296)
T ss_pred ecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCC
Confidence 9999999999999999999999999999999999999999999999999877552 1 112247899999876656
Q ss_pred CCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 495 LNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 495 ~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
.+.++++++++++|+.|++|..++.+++||+|++|||||++|++..
T Consensus 920 ~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~~ 965 (1296)
T PRK10252 920 LDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLPE 965 (1296)
T ss_pred CCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCCc
Confidence 6789999999999999999999999999999999999999998754
No 65
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=9.7e-68 Score=555.10 Aligned_cols=484 Identities=20% Similarity=0.285 Sum_probs=382.8
Q ss_pred HHHHHhhcccCCCCCCCCCcEEEECCCC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 40 AVDYVSSLRATLPWRDDDTVALINSVTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 40 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
+.+.+.+.++++ |+++|+++...+ +++||+||.++++++|++|.+ . ++|++|+++++|++++++++|||++
T Consensus 4 ~~~~l~~~~~~~----~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-~--~~g~~V~l~~~~~~e~~~~~la~~~ 76 (525)
T PRK05851 4 LAAALSDAMTAS----GRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-R--DRPGAVGLVGEPTVELVAAIQGAWL 76 (525)
T ss_pred HHHHHHHHhcCC----CCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-c--CCCCeEEEEcCCCHHHHHHHHHHHH
Confidence 778888999999 999999987322 789999999999999999998 5 8999999999999999999999999
Q ss_pred cCCeEccCCC-------CCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccC
Q 008895 118 LGVIISPANP-------VNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVC 190 (549)
Q Consensus 118 ~G~~~v~l~~-------~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (549)
+|+++++++. ....+++.+++++++++++|++......+...... +.+. .+........ ........
T Consensus 77 ~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~---~~~~~~~~ 150 (525)
T PRK05851 77 AGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-VTVH--DLATAAHTNR---SASLTPPD 150 (525)
T ss_pred cCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-cccc--cccccccccc---cccCCCCC
Confidence 9998654321 12234566778999999999987765544322111 1111 1111000000 00111245
Q ss_pred CCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCC-CCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC--
Q 008895 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV-SPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-- 267 (549)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~-- 267 (549)
++++++++|||||||.||+|+++|+++.+.+......+ ... .+|+++..+|++|.+++...+.++..|+++++.+.
T Consensus 151 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~ 229 (525)
T PRK05851 151 SGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-GLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTA 229 (525)
T ss_pred CCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHH
Confidence 68999999999999999999999999998888776666 345 78999999999999999888899999999998763
Q ss_pred c--CHHHHHHHHHHhceeeeeecHHHHHHHHhCCC-CCCCCCCCceEEEEecCCCCHHHHHHHHHh---C--CCCcEEcc
Q 008895 268 F--DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS-TDGYDLSSLETVACGAAPLGKDTIMAFASK---F--PKVVLVQA 339 (549)
Q Consensus 268 ~--~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~-~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~---~--~~~~l~~~ 339 (549)
+ ++..+++.+.++++|++..+|.++..+.+... .....++++|.+++||+++++++.++|.+. + +...+++.
T Consensus 230 ~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~ 309 (525)
T PRK05851 230 FSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPS 309 (525)
T ss_pred HHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccc
Confidence 3 57889999999999987555544444433221 234457899999999999999999998875 2 22458999
Q ss_pred cCccccccceecccCcC-------------CCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCC
Q 008895 340 YGLTESTAGVFRTVGPD-------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGE 406 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~-------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~ 406 (549)
||+||++..+....... .....+++|+|++|++++|+|++.+.+++.|+.|||+|+|++++.||+++
T Consensus 310 YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~ 389 (525)
T PRK05851 310 YGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQ 389 (525)
T ss_pred cchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccC
Confidence 99999976554321110 01234679999999999999966666789999999999999999999998
Q ss_pred ccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEE
Q 008895 407 PEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAF 486 (549)
Q Consensus 407 ~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~ 486 (549)
++.+ .++||+|||+|+++ +|.++++||+||+||++|++|+|.+||++|.+||+|.+++|++++++..++.+.++
T Consensus 390 ~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~ 463 (525)
T PRK05851 390 APID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLV 463 (525)
T ss_pred CccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEE
Confidence 8643 47899999999996 89999999999999999999999999999999999999999999988777777777
Q ss_pred EEeCCCCCCCHHHHHHHHHhcCCCC--CcccEEEEeC--ccCCCCCCcccHHHHHcccCcCC
Q 008895 487 VVRQPHSSLNEAEIMEFVARQVSPY--KKIRRVAFIN--AIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 487 v~~~~~~~~~~~~i~~~l~~~l~~~--~~p~~i~~v~--~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
++... ...+.+++.++++++|+.+ +.|+.+++++ +||+|++|||+|++|+++++++.
T Consensus 464 v~~~~-~~~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~~~~ 524 (525)
T PRK05851 464 IAAEF-RGPDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLEAAD 524 (525)
T ss_pred EEEEe-cCcchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHHHHHHHHhcC
Confidence 66442 2235567777777777776 8999999998 89999999999999999987754
No 66
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.7e-66 Score=546.16 Aligned_cols=489 Identities=27% Similarity=0.402 Sum_probs=413.7
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECC---CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSV---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~---~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la 114 (549)
.++.+++.+.++++ |+++|++... ..+.+||.||.++++++|+.|.+ .|+++||+|+++++|+.+++++++|
T Consensus 7 ~~l~~~~~~~a~~~----p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-~g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 7 QHLRQMWDDLADVY----GHKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-LGIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred ccHHHHHHHHHHHC----CCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 58999999999999 9999998642 13689999999999999999998 9999999999999999999999999
Q ss_pred HHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC------CC-eEEEecC--------CchhhhhcccC
Q 008895 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KH-RTILIDS--------PEFDSMTMSWN 179 (549)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~-~~~~~~~--------~~~~~~~~~~~ 179 (549)
|+++|+++++++|..+.+++.++++++++++++++.+....+.+. .. .++..+. ..+.+......
T Consensus 82 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (517)
T PRK08008 82 LAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQP 161 (517)
T ss_pred HHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCC
Confidence 999999999999999999999999999999999998765544321 11 1222221 11222211111
Q ss_pred CCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhh
Q 008895 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (549)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~ 258 (549)
.. ........++++++++|||||||.||+|.++|.++........... ....++++++.+|++|..+. ..++.++..
T Consensus 162 ~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 239 (517)
T PRK08008 162 AT-LCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-ALRDDDVYLTVMPAFHIDCQCTAAMAAFSA 239 (517)
T ss_pred cc-ccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-CCCCCCeEEEecCcHHHHHHHHHHHHHHhc
Confidence 00 1111233568899999999999999999999999986543322222 35678899999999998766 567788889
Q ss_pred ccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEc
Q 008895 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (549)
Q Consensus 259 g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~ 338 (549)
|+++++.+.+++..+++.++++++|++.++|++++.++............++.++++ .+++++....+.+.+ ++++++
T Consensus 240 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 317 (517)
T PRK08008 240 GATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERF-GVRLLT 317 (517)
T ss_pred CcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHHh-CCeEEe
Confidence 999999998999999999999999999999999999887654444445678887775 478999999999988 789999
Q ss_pred ccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEec---CCcccccCCCccccccccC
Q 008895 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG---PTIMKGYVGEPEVTSATLL 415 (549)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g---~~~~~gy~~~~~~~~~~~~ 415 (549)
.||+||++..+.... .......+++|.|+++++++|+| +++++++.|+.|||+++| ++++.||+++++.+.+.|.
T Consensus 318 ~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~ 395 (517)
T PRK08008 318 SYGMTETIVGIIGDR-PGDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLE 395 (517)
T ss_pred eccccccccccccCC-ccccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhccc
Confidence 999999986555432 22334567899999999999999 678999999999999998 6899999999999999998
Q ss_pred CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCC
Q 008895 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSL 495 (549)
Q Consensus 416 ~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 495 (549)
.+|||+|||+|+++++|.+++.||.+|+||.+|++|+|.+||++|.+++.|.+++|++.++...++.+.+++++.++...
T Consensus 396 ~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~~ 475 (517)
T PRK08008 396 ADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETL 475 (517)
T ss_pred CCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999988888899999999887777
Q ss_pred CHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHH
Q 008895 496 NEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELR 537 (549)
Q Consensus 496 ~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~ 537 (549)
+.++++++++++++++++|..++++++||+|++||++|+.|+
T Consensus 476 ~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 476 SEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 889999999999999999999999999999999999999875
No 67
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.1e-67 Score=611.18 Aligned_cols=494 Identities=17% Similarity=0.227 Sum_probs=408.6
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEEC-------CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINS-------VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~-------~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v 110 (549)
.++.++|.++++++ |+++|+++. ..++++||+||.++++++|++|++ .|+++|++|+++++|++++++
T Consensus 236 ~~l~~~~~~~a~~~----pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~~~~~i~ 310 (1389)
T TIGR03443 236 GAIHDIFADNAEKH----PDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK-TGIKRGDVVMIYAYRGVDLVV 310 (1389)
T ss_pred CcHHHHHHHHHHhC----CCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEecCCHHHHH
Confidence 47999999999999 999999852 125789999999999999999998 899999999999999999999
Q ss_pred HHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc---HHHHhc-----C----CCeEEEecCC-ch------
Q 008895 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---VHKLAK-----L----KHRTILIDSP-EF------ 171 (549)
Q Consensus 111 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---~~~~~~-----~----~~~~~~~~~~-~~------ 171 (549)
++|||+++|++++|++|.++.+++.++++.+++++++++... ...+.. . ....+.+... ..
T Consensus 311 ~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1389)
T TIGR03443 311 AVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLE 390 (1389)
T ss_pred HHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccccccc
Confidence 999999999999999999999999999999999999987542 111110 0 0111111110 00
Q ss_pred ---hhhhcccCC-CccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHH
Q 008895 172 ---DSMTMSWNS-KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (549)
Q Consensus 172 ---~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 247 (549)
.+....... ..........++++++++|||||||.||||+++|+++.+.+.+....+ ...++++++..+|++|..
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~d~ 469 (1389)
T TIGR03443 391 GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-GLSENDKFTMLSGIAHDP 469 (1389)
T ss_pred cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEecCceecc
Confidence 000000000 000111124578899999999999999999999999999888777666 467789999999999998
Q ss_pred HHHHHHHHhhhccEEEEecC---cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHH
Q 008895 248 GLFFCFRAAALMETAVVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTI 324 (549)
Q Consensus 248 g~~~~~~~l~~g~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~ 324 (549)
++..++.++..|+++++.+. .++..+++.|+++++|+++++|+++..+.... ...++++|.+++|||++++...
T Consensus 470 ~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~ 546 (1389)
T TIGR03443 470 IQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDC 546 (1389)
T ss_pred hHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHH
Confidence 88889999999999998764 36789999999999999999999999887543 2347899999999999999999
Q ss_pred HHHHHhCCCCcEEcccCccccccceecccCcCC---------CCCCCccccccCCcEEEEEcCCC-CCcCCCCCcceEEE
Q 008895 325 MAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGLEAKIVDPET-GDSLPPGKEGELSI 394 (549)
Q Consensus 325 ~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~Gel~v 394 (549)
+++.+.++++++++.||+||++..+........ .....++|+|+++++++|+|+++ +++++.|+.|||+|
T Consensus 547 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i 626 (1389)
T TIGR03443 547 LRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYV 626 (1389)
T ss_pred HHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEe
Confidence 999998888999999999999876554321111 11235789999999999999543 57899999999999
Q ss_pred ecCCcccccCCCccccccccCC----------------------------CCeeecCceEEEecCCeEEEEcccCCeeee
Q 008895 395 RGPTIMKGYVGEPEVTSATLLP----------------------------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKY 446 (549)
Q Consensus 395 ~g~~~~~gy~~~~~~~~~~~~~----------------------------~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~ 446 (549)
+|++++.||+++|+.|.++|.. ++||+|||+|++++||.+++.||+||+||+
T Consensus 627 ~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki 706 (1389)
T TIGR03443 627 RAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI 706 (1389)
T ss_pred cccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe
Confidence 9999999999999999988742 579999999999999999999999999999
Q ss_pred CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC-C-------------------------CCHHHH
Q 008895 447 KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS-S-------------------------LNEAEI 500 (549)
Q Consensus 447 ~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~-~-------------------------~~~~~i 500 (549)
+|++|+|.|||.+|.+||.|.+++|++.++...++.+++|+++.... . ...+++
T Consensus 707 ~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 786 (1389)
T TIGR03443 707 RGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDI 786 (1389)
T ss_pred CcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHHH
Confidence 99999999999999999999999999988877788999999876221 1 014689
Q ss_pred HHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 501 MEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 501 ~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
+++++++|+.|++|..++++++||+|++|||||++|++.+
T Consensus 787 ~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~~ 826 (1389)
T TIGR03443 787 REYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFPD 826 (1389)
T ss_pred HHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCCc
Confidence 9999999999999999999999999999999999997543
No 68
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.4e-67 Score=568.52 Aligned_cols=487 Identities=20% Similarity=0.295 Sum_probs=398.6
Q ss_pred CCHHHHHhhcccCCCCCCCC-CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDD-TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~-~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
.|+.+.|.+.++++ |+ ++|+.+. ..+++||+||.++++++|++|.+ . +++||+|+++++|++++++++|||+
T Consensus 204 ~t~~~~l~~~~~~~----p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~Val~~~n~~e~~~~~lA~~ 276 (718)
T PRK08043 204 ETLYEALLSAQYRY----GAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEK-Y-SVEGERIGLMLPNATISAAVIFGAS 276 (718)
T ss_pred CCHHHHHHHHHHHh----CCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHH-h-cCCCceEEEEcCCcHHHHHHHHHHH
Confidence 68899999999999 87 5777653 24789999999999999999998 5 5999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHh--cC-----CCeEEEecCC----chhhh-h-cccCCCcc
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLA--KL-----KHRTILIDSP----EFDSM-T-MSWNSKHE 183 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~--~~-----~~~~~~~~~~----~~~~~-~-~~~~~~~~ 183 (549)
++|++++|+++.++.+++.++++++++++++++.+..+... .. ....+.++.. .+... . ........
T Consensus 277 ~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (718)
T PRK08043 277 LRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADKLWIFAHLLMPR 356 (718)
T ss_pred HcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999876544211 00 1122222211 00000 0 00000000
Q ss_pred ccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEE
Q 008895 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (549)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~ 262 (549)
.......++++++++|||||||.||+|+++|+++.+........+ ....+|++++.+|++|.+++ ..++.++..|+++
T Consensus 357 ~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~v 435 (718)
T PRK08043 357 LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-DFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEV 435 (718)
T ss_pred cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-CCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEE
Confidence 011234568999999999999999999999999998887766555 56788999999999999998 5577889999999
Q ss_pred EEecC-cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccC
Q 008895 263 VVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (549)
Q Consensus 263 ~~~~~-~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG 341 (549)
++.+. ++...+++.+.++++|+++++|+++..+.+.. ...+++++|.+++||+++++++.+.+++.+ ++.+++.||
T Consensus 436 v~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG 512 (718)
T PRK08043 436 FLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYG 512 (718)
T ss_pred EEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccC
Confidence 98764 57788899999999999999999988876642 234578999999999999999999999988 789999999
Q ss_pred ccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCC--Cccc-------ccc
Q 008895 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVG--EPEV-------TSA 412 (549)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~--~~~~-------~~~ 412 (549)
+||++....... ......+++|+|+||++++++|++ + .++.|||+++|++++.||++ +++. +..
T Consensus 513 ~TE~~~~~~~~~--~~~~~~~svG~p~pg~~~~i~d~~-~----~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~ 585 (718)
T PRK08043 513 VTECAPVVSINV--PMAAKPGTVGRILPGMDARLLSVP-G----IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENAR 585 (718)
T ss_pred cccccceEEecC--CcccCCCCCCCcCCCCeeEEecCC-C----CCCceEEEEecCCccccccCCCCccccccccccccc
Confidence 999987665432 222356899999999999999843 2 24569999999999999998 3442 222
Q ss_pred ccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCC
Q 008895 413 TLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPH 492 (549)
Q Consensus 413 ~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~ 492 (549)
.+..+|||+|||+|++|+||++++.||+||+||++|++|+|.+||+++.+++.+.+++|++.++...++.+++++. +
T Consensus 586 ~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~---~ 662 (718)
T PRK08043 586 GEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTT---D 662 (718)
T ss_pred ccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEc---C
Confidence 2335799999999999999999999999999999999999999999999999888999999888888888887764 2
Q ss_pred CCCCHHHHHHHHHhc-CCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCC
Q 008895 493 SSLNEAEIMEFVARQ-VSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 493 ~~~~~~~i~~~l~~~-l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
...+.+++.++++++ |+.|++|..++++++||+|++|||+|++|++++.+.++
T Consensus 663 ~~~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 716 (718)
T PRK08043 663 SELTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDEPEQ 716 (718)
T ss_pred cccCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhcccc
Confidence 346788999999987 99999999999999999999999999999999877654
No 69
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-66 Score=552.33 Aligned_cols=500 Identities=23% Similarity=0.329 Sum_probs=415.3
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECC-CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSV-TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~-~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
.|+.+++...+..+ |++.|+++.. .++.+||.||.+++.++|++|.+..|+++||+|+++++|+.+++++++||+
T Consensus 10 ~~~~~~l~~~a~~~----~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~ 85 (576)
T PRK05620 10 LSLTRILEYGSTVH----GDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVA 85 (576)
T ss_pred CcHHHHHHHHHHhC----CCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 79999999999989 9999987642 247999999999999999999854699999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCe-EEEecCC----------------chhhh
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP----------------EFDSM 174 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~----------------~~~~~ 174 (549)
++|++++|++|..+.+++.++++.++++++|++....+.+.+. ... ++.++.. .|.++
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (576)
T PRK05620 86 CMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEAL 165 (576)
T ss_pred hcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHH
Confidence 9999999999999999999999999999999998766654321 111 2233211 12222
Q ss_pred hcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHh--hccCCCCCCCcEEEEecChhhHHHHHHH
Q 008895 175 TMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS--FASSPKRVSPAVMLFTMPYFHIYGLFFC 252 (549)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~--~~~~~~~~~~~~~~~~~pl~~~~g~~~~ 252 (549)
..... . ........++++++++|||||||.||+|.++|+++....... ...+ .....+++++.+|++|.+++...
T Consensus 166 ~~~~~-~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~~ 242 (576)
T PRK05620 166 LDGRS-T-VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSL-AVTHGESFLCCVPIYHVLSWGVP 242 (576)
T ss_pred hhcCC-C-cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhc-CCCCCCeEEEeCChHHhhhhHHH
Confidence 22111 0 111223456889999999999999999999999986554332 1223 45678999999999999999888
Q ss_pred HHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhC
Q 008895 253 FRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKF 331 (549)
Q Consensus 253 ~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~ 331 (549)
+.++..|+++++.. .+++..+++.|+++++|.++++|+++..++...........++|.+++||+++++++.+++.+.+
T Consensus 243 ~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~ 322 (576)
T PRK05620 243 LAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY 322 (576)
T ss_pred HHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh
Confidence 88999999988875 57899999999999999999999999888765433333456899999999999999999999988
Q ss_pred CCCcEEcccCccccccceecccCcCC------CCCCCccccccCCcEEEEEcCCCCCcCC--CCCcceEEEecCCccccc
Q 008895 332 PKVVLVQAYGLTESTAGVFRTVGPDE------CRRWGSTGRLSAGLEAKIVDPETGDSLP--PGKEGELSIRGPTIMKGY 403 (549)
Q Consensus 332 ~~~~l~~~yG~tE~~~~~~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~~~~~--~g~~Gel~v~g~~~~~gy 403 (549)
++++++.||+||++..+........ .....+.|++.++++++++|+ +..++ ++..|||+++|+.++.||
T Consensus 323 -~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~--g~~~~~~~~~~Gel~v~g~~~~~gY 399 (576)
T PRK05620 323 -GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND--GQVMESTDRNEGEIQVRGNWVTASY 399 (576)
T ss_pred -CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC--CccccCCCCCceEEEEEcCcccccc
Confidence 7899999999999876544321110 012247899999999999984 55553 568899999999999999
Q ss_pred CCCcccc----------------ccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcc
Q 008895 404 VGEPEVT----------------SATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVA 467 (549)
Q Consensus 404 ~~~~~~~----------------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~ 467 (549)
+++++.+ ...+..+|||+|||+++++++|.+++.||.+|+++.+|.+|++.+||++|.+||.|.
T Consensus 400 ~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~ 479 (576)
T PRK05620 400 YHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEVV 479 (576)
T ss_pred cCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCce
Confidence 9999877 233446789999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCCCceeEEEEEeCCCCC---CCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 468 DAAVIPYPDEEAGQMPMAFVVRQPHSS---LNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 468 ~~~vv~~~~~~~~~~~~~~v~~~~~~~---~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
+++|++.++...++.++++++..++.. ...++++++++++|+++++|+.|+++++||+|++||++|++|++++.++.
T Consensus 480 ~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~~~ 559 (576)
T PRK05620 480 ECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHLADGD 559 (576)
T ss_pred EEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHHHHHhcCC
Confidence 999999999888889999988776543 35689999999999999999999999999999999999999999999888
Q ss_pred CCc
Q 008895 545 SSC 547 (549)
Q Consensus 545 ~~~ 547 (549)
++|
T Consensus 560 ~~~ 562 (576)
T PRK05620 560 FEI 562 (576)
T ss_pred ccE
Confidence 765
No 70
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-66 Score=548.21 Aligned_cols=496 Identities=28% Similarity=0.431 Sum_probs=416.9
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.+...++.+ |+++|+.+. ++.+||.||.+++.++|++|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 33 ~~l~~~l~~~a~~~----p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 105 (567)
T PRK06178 33 RPLTEYLRAWARER----PQRPAIIFY--GHVITYAELDELSDRFAALLRQ-RGVGAGDRVAVFLPNCPQFHIVFFGILK 105 (567)
T ss_pred ccHHHHHHHHHHHC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCcHHHHHHHHHHH
Confidence 68999999999988 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC----CCeEEE-ecCCc----------------------
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTIL-IDSPE---------------------- 170 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~-~~~~~---------------------- 170 (549)
+|++++|++|..+.+++.++++.++++++++++...+.+.+. ....+. ....+
T Consensus 106 ~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (567)
T PRK06178 106 LGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAA 185 (567)
T ss_pred hCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccccccccccccccc
Confidence 999999999999999999999999999999998876655432 111111 11000
Q ss_pred -hhhhhcccCC-CccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHH
Q 008895 171 -FDSMTMSWNS-KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYG 248 (549)
Q Consensus 171 -~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g 248 (549)
+.++...... ..........++++++++|||||||.||+|.++|.++..+............+.++++..+|++|.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g 265 (567)
T PRK06178 186 GAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAG 265 (567)
T ss_pred ccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHH
Confidence 0000000000 00111223456899999999999999999999999998776554443334677889999999999999
Q ss_pred H-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEe--cCCCCHHHHH
Q 008895 249 L-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACG--AAPLGKDTIM 325 (549)
Q Consensus 249 ~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~--Ge~l~~~~~~ 325 (549)
+ ..++.++..|+++++.+.+++..+++.++++++|.++++|..+..+..........+++++.+..+ |+++++++.+
T Consensus 266 ~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 345 (567)
T PRK06178 266 ENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQ 345 (567)
T ss_pred HHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHH
Confidence 8 567788999999999998999999999999999999999999998887665555567788886544 5999999999
Q ss_pred HHHHhCCCCcEEcccCccccccceecccCcC-C----CCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcc
Q 008895 326 AFASKFPKVVLVQAYGLTESTAGVFRTVGPD-E----CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (549)
Q Consensus 326 ~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~-~----~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 400 (549)
.+++.++...+.+.||+||++..+....... . ....+++|+|++|++++++|++++++++.|+.|||+|+|++++
T Consensus 346 ~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~ 425 (567)
T PRK06178 346 RWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLL 425 (567)
T ss_pred HHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCccc
Confidence 9999985444445799999876544321111 0 1234678999999999999988899999999999999999999
Q ss_pred cccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCC
Q 008895 401 KGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAG 480 (549)
Q Consensus 401 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~ 480 (549)
.||+++++.+...| .+|||+|||+|+++++|++++.||++|+|+++|.+|+|.+||+++.++++|.++++++.++...+
T Consensus 426 ~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g 504 (567)
T PRK06178 426 KGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKG 504 (567)
T ss_pred ccccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccC
Confidence 99999999888777 57899999999999999999999999999999999999999999999999999999999887778
Q ss_pred ceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 481 QMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 481 ~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+.+++++++.+....+.+++.++++++++.+++|. +.+++++|+|++||++|++|++++++
T Consensus 505 ~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 505 QVPVAFVQLKPGADLTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEE 565 (567)
T ss_pred cceEEEEEeCCCCcCCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHh
Confidence 89999999877666788999999999999999997 88899999999999999999998865
No 71
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-66 Score=544.74 Aligned_cols=478 Identities=24% Similarity=0.333 Sum_probs=406.6
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
+.|+.+.+...++++ |+++|+++. ++.+||.||.++++++|++|++ .|+++|++|+++++|++++++++|||+
T Consensus 34 ~~~~~~~~~~~a~~~----p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~ 106 (516)
T PRK13383 34 GTNPYTLLAVTAARW----PGRTAIIDD--DGALSYRELQRATESLARRLTR-DGVAPGRAVGVMCRNGRGFVTAVFAVG 106 (516)
T ss_pred CCcHHHHHHHHHHHC----CCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 479999999999999 999999986 6799999999999999999998 899999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEE
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (549)
++|++++|+++.++.+++.++++.++++++++++...+.+.......+.++..... . ... . ......++.++
T Consensus 107 ~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~--~~p~~~~~~~~ 178 (516)
T PRK13383 107 LLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPATAG-A-EES----G--GRPAVAAPGRI 178 (516)
T ss_pred HhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccchhh-h-hcC----C--CCCCCCCCCcE
Confidence 99999999999999999999999999999999988777665443333333321110 0 000 0 01112355678
Q ss_pred EEccCCCCCccchhhhcHHHHHHH--HHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHH
Q 008895 197 IMYSSGTTGRVKGVMLTHRNLTAA--VASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMML 274 (549)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~--~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~ 274 (549)
++|||||||.||+|.++|...... .......+ ....+++++..+|++|.+|+...+.++..|++++....+++..++
T Consensus 179 il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~ 257 (516)
T PRK13383 179 VLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-RLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAAL 257 (516)
T ss_pred EEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-ccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHH
Confidence 999999999999999999743211 11122222 456788999999999999998788889999999988889999999
Q ss_pred HHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecc
Q 008895 275 KAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (549)
Q Consensus 275 ~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~ 352 (549)
+.++++++|.++++|+++..+...... ....++++|.+++||++++++++++|.+.+ +..+++.||+||++..+...
T Consensus 258 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~ 336 (516)
T PRK13383 258 AQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALAT 336 (516)
T ss_pred HHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceecc
Confidence 999999999999999999999875432 223578999999999999999999999999 67899999999998665443
Q ss_pred cCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCC
Q 008895 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (549)
Q Consensus 353 ~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g 432 (549)
. .......+++|.|+++++++|+| +++++++.|+.|||+++|+.++.||++.+.. .+ .+|||+|||+|++|++|
T Consensus 337 ~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~---~~-~~g~~~TGDl~~~d~~G 410 (516)
T PRK13383 337 P-ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGK---AV-VDGMTSTGDMGYLDNAG 410 (516)
T ss_pred c-cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchh---he-ecCceecceeEEEcCCc
Confidence 2 12233457899999999999999 6688999999999999999999999987542 22 47999999999999999
Q ss_pred eEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Q 008895 433 FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYK 512 (549)
Q Consensus 433 ~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~ 512 (549)
++++.||.+|++|++|++|+|.+||.+|.++|.|.+++++++++...++.+.++|+..+....+.+++++++++++++++
T Consensus 411 ~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~ 490 (516)
T PRK13383 411 RLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKDRVSRFE 490 (516)
T ss_pred cEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999999999999999998888899999999887666778899999999999999
Q ss_pred cccEEEEeCccCCCCCCcccHHHHH
Q 008895 513 KIRRVAFINAIPKSAAGKILRMELR 537 (549)
Q Consensus 513 ~p~~i~~v~~lP~t~~GKv~r~~l~ 537 (549)
+|..++++++||+|++||++|++|+
T Consensus 491 ~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 491 QPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred CCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 9999999999999999999999985
No 72
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=4.1e-66 Score=541.62 Aligned_cols=487 Identities=21% Similarity=0.302 Sum_probs=410.8
Q ss_pred CHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHc
Q 008895 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (549)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~ 118 (549)
++.+.+...+..+ |+++|+.+. ++.+||.||.+++.++|+.|.+ .|+++|++|+++++|+.++++++|||+++
T Consensus 1 ~~~~~l~~~a~~~----p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 73 (502)
T TIGR01734 1 KLIEAIQAFAETY----PQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQK-RILPKKSPIIVYGHMEPHMLVAFLGSIKS 73 (502)
T ss_pred CHHHHHHHHHHHC----CCceEEEcC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCeEEEEeCCCHHHHHHHHHHHHh
Confidence 4678888888888 999999877 7899999999999999999998 89999999999999999999999999999
Q ss_pred CCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEEE
Q 008895 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIM 198 (549)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 198 (549)
|++++|+++.++.+.+.++++..+++.++++.......... ..+.++. ......... . ........+++.++++
T Consensus 74 G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~-~-~~~~~~~~~~~~~~il 147 (502)
T TIGR01734 74 GHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVGT--QIITLSA--LEQAETSGG-P-VSFDHAVKGDDNYYII 147 (502)
T ss_pred CCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccCC--ceEEchH--hhhhhhhcC-C-ccccccCCCCCeEEEE
Confidence 99999999999999999999999999999987654433221 2222221 111111110 0 1111224568899999
Q ss_pred ccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC---cCHHHHHH
Q 008895 199 YSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMMLK 275 (549)
Q Consensus 199 ~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~---~~~~~~~~ 275 (549)
|||||||.||+|.++|+++..........+ ....+++++..+|++|..++...+.++..|+++++.+. .++..+++
T Consensus 148 ~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~ 226 (502)
T TIGR01734 148 YTSGSTGNPKGVQISHDNLVSFTNWMLADF-PLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFE 226 (502)
T ss_pred ECCCCCCCCCEEEEecHHHHHHHHHHHHhC-CCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHH
Confidence 999999999999999999998887766666 46778899999999999999888999999999998764 57899999
Q ss_pred HHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCc
Q 008895 276 AVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP 355 (549)
Q Consensus 276 ~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~ 355 (549)
.+.+++++.+.++|+++..++.........+++++.++++|+++++++.+++.+.++++.+++.||+||++.........
T Consensus 227 ~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 306 (502)
T TIGR01734 227 ELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKIT 306 (502)
T ss_pred HHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEcc
Confidence 99999999999999999877765544555688999999999999999999999999899999999999987544332111
Q ss_pred C---CCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccC---CCCeeecCceEEEe
Q 008895 356 D---ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLL---PDGWMRTGDLCYID 429 (549)
Q Consensus 356 ~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~---~~~~~~TGD~~~~~ 429 (549)
. ......++|.+.++++++|+| +++++++.|+.|||+|+|+.++.||+++++.+...|. ..+||+|||+|+++
T Consensus 307 ~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~ 385 (502)
T TIGR01734 307 QEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTIT 385 (502)
T ss_pred ccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEE
Confidence 1 112335799999999999999 5688999999999999999999999999998887663 23599999999998
Q ss_pred cCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeec-CCCCCceeEEEEEeCCCCCCC----HHHHHHHH
Q 008895 430 EDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYP-DEEAGQMPMAFVVRQPHSSLN----EAEIMEFV 504 (549)
Q Consensus 430 ~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~-~~~~~~~~~~~v~~~~~~~~~----~~~i~~~l 504 (549)
++ ++++.||.+|+|+++|++|+|.+||+++.++|.|.++++++.. +....+.++++++.......+ ..++++.+
T Consensus 386 ~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~ 464 (502)
T TIGR01734 386 DG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKEL 464 (502)
T ss_pred CC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHH
Confidence 76 9999999999999999999999999999999999999999976 444567888998876543322 26789999
Q ss_pred HhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 505 ARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 505 ~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
+++|+++++|+.++++++||+|++||++|++|++++.
T Consensus 465 ~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 465 KKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred hhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 9999999999999999999999999999999999864
No 73
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=7.9e-66 Score=542.33 Aligned_cols=491 Identities=25% Similarity=0.372 Sum_probs=415.6
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
..++.+.+.+.++ |+++|+++. ++.+||.||.++++++|+.|.+ .|+++|++|+++++|+++++++++||+
T Consensus 24 ~~~~~~~~~~~a~------p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~v~~~n~~~~~~~~la~~ 94 (536)
T PRK10946 24 DLPLTDILTRHAA------SDAIAVICG--ERQFSYRELNQASDNLACSLRR-QGIKPGDTALVQLGNVAEFYITFFALL 94 (536)
T ss_pred CccHHHHHHHhhC------CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCChHHHHHHHHHHH
Confidence 3688999977775 789999987 7899999999999999999999 899999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc--------HHHHhcC--CCeEEEecCC----chhhhhcccCCCc
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--------VHKLAKL--KHRTILIDSP----EFDSMTMSWNSKH 182 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~ 182 (549)
++|+++++..+.....++..+++..++++++++... ...+... ....+.+... .+.........
T Consensus 95 ~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 172 (536)
T PRK10946 95 KLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDAINHPAE-- 172 (536)
T ss_pred HcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHHhhCccc--
Confidence 999988877777778889999999999999998642 1222211 1222222211 22222222111
Q ss_pred cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHH--HHHHHhhhcc
Q 008895 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF--FCFRAAALME 260 (549)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~--~~~~~l~~g~ 260 (549)
........+++.++++|||||||.||+|.++|+++...+......+ ....++++++.+|++|.+++. ..+.++..|+
T Consensus 173 ~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~ 251 (536)
T PRK10946 173 DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-GFTPQTRYLCALPAAHNYPMSSPGALGVFLAGG 251 (536)
T ss_pred ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCCCCceEEEecCccccccchhhhHHHHhhcCc
Confidence 1112234568899999999999999999999999999888776666 467789999999999988873 4678899999
Q ss_pred EEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCC--CCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEc
Q 008895 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG--STDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (549)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~--~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~ 338 (549)
++++...+++..+++.++++++|++.++|+++..+++.. ......++++|.+++||+++++++.+++.+.+ ++++++
T Consensus 252 ~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~ 330 (536)
T PRK10946 252 TVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQ 330 (536)
T ss_pred EEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEE
Confidence 999988889999999999999999999999999988763 22334578999999999999999999999988 789999
Q ss_pred ccCccccccceecccCcCCCCCCCcccccc-CCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCC
Q 008895 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD 417 (549)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~ 417 (549)
.||+||++..... .........+++|+|+ +++.++|+| +++++++.|+.|||+++|+.++.||+++++.+...|..+
T Consensus 331 ~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d 408 (536)
T PRK10946 331 VFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDAN 408 (536)
T ss_pred eecccccceeeec-CCCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhcccC
Confidence 9999996543322 1222223457899998 899999999 678999999999999999999999999999999999889
Q ss_pred CeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCH
Q 008895 418 GWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNE 497 (549)
Q Consensus 418 ~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~ 497 (549)
+||+|||+|++|++|++++.||.+|+++++|++|+|.+||++|.++|+|.+++|++.++...++.++++++.++. .+.
T Consensus 409 ~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~--~~~ 486 (536)
T PRK10946 409 GFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP--LKA 486 (536)
T ss_pred CceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC--CCH
Confidence 999999999999999999999999999999999999999999999999999999999998888889999987654 678
Q ss_pred HHHHHHHHhc-CCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 498 AEIMEFVARQ-VSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 498 ~~i~~~l~~~-l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
+++.+++++. +++|++|..+.+++++|+|++||++|++|++++.+..
T Consensus 487 ~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 487 VQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred HHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 8999999885 9999999999999999999999999999999876543
No 74
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-66 Score=546.07 Aligned_cols=496 Identities=23% Similarity=0.348 Sum_probs=412.0
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECC--CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSV--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~--~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~ 115 (549)
.++.+++.+.++.+ |+++++.+.. ..+.+||.||.++++++|++|.+ .|+++||+|+++++|+++++++++||
T Consensus 10 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~~d~v~i~~~~~~~~~~~~la~ 84 (539)
T PRK07008 10 LLISSLIAHAARHA----GDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAA-LGVEPGDRVGTLAWNGYRHLEAYYGV 84 (539)
T ss_pred CCHHHHHHHHHhhC----CCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 57889999989888 8888887532 23689999999999999999999 89999999999999999999999999
Q ss_pred HHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCe-EEEecC-----------Cchhhhhccc
Q 008895 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDS-----------PEFDSMTMSW 178 (549)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~-----------~~~~~~~~~~ 178 (549)
+++|++++|++|..+.+++..+++.+++++++++....+.+.+. ... ++.+.. ..++++....
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (539)
T PRK07008 85 SGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQ 164 (539)
T ss_pred HhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhccc
Confidence 99999999999999999999999999999999998765543321 111 111111 1122221111
Q ss_pred CCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHH--hhccCCCCCCCcEEEEecChhhHHHHHHHHHHh
Q 008895 179 NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS--SFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAA 256 (549)
Q Consensus 179 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~--~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l 256 (549)
.. ........+++.++++|||||||.||+|+++|++++.+... ....+ ....+++++..+|++|.+++...+.++
T Consensus 165 ~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~~~~~~~~~l 241 (539)
T PRK07008 165 DG--DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-GLSARDAVLPVVPMFHVNAWGLPYSAP 241 (539)
T ss_pred CC--CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-CCCCCceEEecCchHHhhhHHHHHHHH
Confidence 10 11122345678999999999999999999999998754322 22233 456789999999999988887677888
Q ss_pred hhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCc
Q 008895 257 ALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVV 335 (549)
Q Consensus 257 ~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~ 335 (549)
..|+++++.. .+++..+++.++++++|++.++|+++..+++........++++|.++++|+++++++++++.+.+ ++.
T Consensus 242 ~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~ 320 (539)
T PRK07008 242 LTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVE 320 (539)
T ss_pred hcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCc
Confidence 8999998864 57899999999999999999999999999987766666789999999999999999999999988 789
Q ss_pred EEcccCccccccceecccCcC---------CCCCCCccccccCCcEEEEEcCCCCCcCCCC--CcceEEEecCCcccccC
Q 008895 336 LVQAYGLTESTAGVFRTVGPD---------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPG--KEGELSIRGPTIMKGYV 404 (549)
Q Consensus 336 l~~~yG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~gy~ 404 (549)
+++.||+||++..+....... ......++|+|+|++.++|+| ++++.++.+ +.|||+++|+.++.||+
T Consensus 321 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~ 399 (539)
T PRK07008 321 VIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYF 399 (539)
T ss_pred eecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhc
Confidence 999999999986544321100 011235789999999999999 567777653 57999999999999999
Q ss_pred CCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeE
Q 008895 405 GEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPM 484 (549)
Q Consensus 405 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~ 484 (549)
++++ ..+ .+|||+|||+|+++++|++++.||++|+++.+|++|+|.+||++|.++|.|.++++++.++...++.++
T Consensus 400 ~~~~---~~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~ 475 (539)
T PRK07008 400 RGDA---SPL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPL 475 (539)
T ss_pred CChh---hhh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceE
Confidence 9873 234 378999999999999999999999999999999999999999999999999999999999887788899
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCCCc
Q 008895 485 AFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGSSC 547 (549)
Q Consensus 485 ~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~ 547 (549)
++|+..++...+.+++++++++++++|+.|+.|+++++||+|++||++|++|++++.+-.++.
T Consensus 476 ~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~~~ 538 (539)
T PRK07008 476 LVVVKRPGAEVTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVLPT 538 (539)
T ss_pred EEEEeCCCCccCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhcccC
Confidence 998887666678899999999999999999999999999999999999999999988766653
No 75
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-66 Score=652.05 Aligned_cols=485 Identities=22% Similarity=0.292 Sum_probs=424.8
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.++|.++++++ |+++|++++ ++++||+||.++++++|+.|++ .|+++|++|+++++|+.++++++|||++
T Consensus 511 ~~~~~~~~~~a~~~----p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~-~gv~~g~~V~l~~~~s~~~i~~~la~~~ 583 (5163)
T PRK12316 511 RGVHRLFEEQVERT----PEAPALAFG--EETLDYAELNRRANRLAHALIE-RGVGPDVLVGVAMERSIEMVVALLAILK 583 (5163)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 58999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-CCeEEEecCCchhhhhcccCCCccccccccCCCCEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (549)
+|++++|++|.++.+++.+++++++++++|++......+... ...++.++... ....... .........++++++
T Consensus 584 aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~a~ 659 (5163)
T PRK12316 584 AGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRPA--AWLEGYS--EENPGTELNPENLAY 659 (5163)
T ss_pred cCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCcc--hhhccCC--CCCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998765544322 23344443221 1111111 011222356789999
Q ss_pred EEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEec---CcCHHHH
Q 008895 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (549)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~---~~~~~~~ 273 (549)
++|||||||.||||+++|+++.+.+.+....+ +...+++++..+|++|..+++.++.++..|+++++.+ .+++..+
T Consensus 660 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~ 738 (5163)
T PRK12316 660 VIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-GLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKL 738 (5163)
T ss_pred EEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-CCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHH
Confidence 99999999999999999999999998887777 4678899999999999999999999999999999985 3789999
Q ss_pred HHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceeccc
Q 008895 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (549)
Q Consensus 274 ~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 353 (549)
++.+.++++|++.++|+++..|++... ...++++|.+++|||++++++.+.+.+.++++++++.||+||++..+....
T Consensus 739 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 816 (5163)
T PRK12316 739 VELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWT 816 (5163)
T ss_pred HHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEe
Confidence 999999999999999999999987543 235789999999999999999999998888899999999999986554433
Q ss_pred CcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC------CCeeecCceEE
Q 008895 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------DGWMRTGDLCY 427 (549)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~------~~~~~TGD~~~ 427 (549)
.........++|+|++|++++|+| +++++++.|+.|||+|+|++++.||+++|+.|.+.|.. ++||+|||+|+
T Consensus 817 ~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~ 895 (5163)
T PRK12316 817 CVEEGGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLAR 895 (5163)
T ss_pred cccccCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEE
Confidence 222333456899999999999999 66899999999999999999999999999999988854 35999999999
Q ss_pred EecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhc
Q 008895 428 IDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQ 507 (549)
Q Consensus 428 ~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~ 507 (549)
+++||.++++||+||+||++|++|+|.|||++|.+||+|.+|+|++.+ ++.++++|+..++.....++++++++++
T Consensus 896 ~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~~~~~~~l~~~l~~~ 971 (5163)
T PRK12316 896 YRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESEGGDWREALKAHLAAS 971 (5163)
T ss_pred ECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCCCCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999875 6789999998776667789999999999
Q ss_pred CCCCCcccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 508 VSPYKKIRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 508 l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
|+.|++|+.|+++++||+|++|||||++|++...
T Consensus 972 Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 972 LPEYMVPAQWLALERLPLTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred CCCccCCCeEEEHhhCCCCCCCChhHHhhcCccc
Confidence 9999999999999999999999999999987654
No 76
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=9.2e-67 Score=652.87 Aligned_cols=488 Identities=20% Similarity=0.294 Sum_probs=423.7
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|.++++++ |+++|++++ ++++||+||+++++++|++|++ .|+++|++|++++++++++++++|||++
T Consensus 2003 ~~~~~~~~~~a~~~----p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~~~~~lAil~ 2075 (5163)
T PRK12316 2003 PGVHQRIAEQAARA----PEAIAVVFG--DQHLSYAELDSRANRLAHRLRA-RGVGPEVRVAIAAERSFELVVALLAVLK 2075 (5163)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999987 7899999999999999999999 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-CCeEEEecCCchhhhhcccCCCccccccccCCCCEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (549)
+|++++|++|.++.+++.+++++++++++++++.....+... ....+.++.. ...... . . ........++++++
T Consensus 2076 aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~-~-~~~~~~~~~~~~a~ 2150 (5163)
T PRK12316 2076 AGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRD--AEWADY-P-D-TAPAVQLAGENLAY 2150 (5163)
T ss_pred hceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccch--hhhhcc-C-c-cCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998766544321 2222322221 111110 0 0 11123357889999
Q ss_pred EEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC--cCHHHHH
Q 008895 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FDLKMML 274 (549)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~ 274 (549)
++|||||||.||||+++|+++.+.+......+ ...++++++...|++|..+++.++.++..|+++++.+. +++..++
T Consensus 2151 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~ 2229 (5163)
T PRK12316 2151 VIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-ELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLY 2229 (5163)
T ss_pred EEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-CCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHH
Confidence 99999999999999999999999998877777 47788999999999999888999999999999977653 6889999
Q ss_pred HHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccC
Q 008895 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (549)
Q Consensus 275 ~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~ 354 (549)
+.|+++++|+++++|+++..+........ ..+++|.+++|||++++++.++|.+.+++..+++.||+||++..++....
T Consensus 2230 ~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 2308 (5163)
T PRK12316 2230 DEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKC 2308 (5163)
T ss_pred HHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeec
Confidence 99999999999999999999987543322 24589999999999999999999998888999999999999876654322
Q ss_pred cCCC---CCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC-------CCeeecCc
Q 008895 355 PDEC---RRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTGD 424 (549)
Q Consensus 355 ~~~~---~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-------~~~~~TGD 424 (549)
.... ....++|+|++|++++|+| +++++++.|..|||+|+|+++++||+++|+.|.+.|.. ++||+|||
T Consensus 2309 ~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGD 2387 (5163)
T PRK12316 2309 RPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGD 2387 (5163)
T ss_pred ccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEeccc
Confidence 2111 1225799999999999999 67899999999999999999999999999999999854 35999999
Q ss_pred eEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHH
Q 008895 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFV 504 (549)
Q Consensus 425 ~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l 504 (549)
+|++++||.++++||+||+||++|++|+|.|||++|.++|+|.+++|++.++. .++.+++||+..+....+.+++++++
T Consensus 2388 l~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~~~l~~~l 2466 (5163)
T PRK12316 2388 LARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGKQLVAYVVPDDAAEDLLAELRAWL 2466 (5163)
T ss_pred EEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC-CCeEEEEEEEecCCCccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998765 67899999998877677889999999
Q ss_pred HhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 505 ARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 505 ~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
+++|+.|++|..++++++||+|++|||||++|++...
T Consensus 2467 ~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 2503 (5163)
T PRK12316 2467 AARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPDV 2503 (5163)
T ss_pred HhhCchhcCcceEeeecccCCCCCCccCHhhcCCCcc
Confidence 9999999999999999999999999999999988653
No 77
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.1e-66 Score=543.79 Aligned_cols=493 Identities=24% Similarity=0.326 Sum_probs=413.5
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.++|...++++ |+++|+++. ++++||.||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 10 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~-~g~~~g~~V~i~~~n~~~~~~~~la~~~ 82 (540)
T PRK06164 10 DTLASLLDAHARAR----PDAVALIDE--DRPLSRAELRALVDRLAAWLAA-QGVRRGDRVAVWLPNCIEWVVLFLACAR 82 (540)
T ss_pred CCHHHHHHHHHHhC----CCCeEEecC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 68999999999999 999999976 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH-----HHHhcC------CC-eEEEecCCc--hh--------hhh
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAKL------KH-RTILIDSPE--FD--------SMT 175 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~------~~-~~~~~~~~~--~~--------~~~ 175 (549)
+|++++|+++..+.+++.++++.+++++++++.+.. +.+... .. .++.++... .. ...
T Consensus 83 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (540)
T PRK06164 83 LGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLF 162 (540)
T ss_pred hCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCcccccccc
Confidence 999999999999999999999999999999987642 111111 11 122222100 00 000
Q ss_pred cccCCCccc--cccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHH
Q 008895 176 MSWNSKHEL--DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCF 253 (549)
Q Consensus 176 ~~~~~~~~~--~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~ 253 (549)
......... ......++++++++|||||||.||+|.++|+++..........+ ....++++++.+|++|.+|+...+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~ 241 (540)
T PRK06164 163 ALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-GYDPGAVLLAALPFCGVFGFSTLL 241 (540)
T ss_pred cccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCCCCCEEEEcCCchhHHHHHHHH
Confidence 000000000 01123457899999999999999999999999998887776666 466889999999999999998889
Q ss_pred HHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEec-CCCCHHHHHHHHHhCC
Q 008895 254 RAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA-APLGKDTIMAFASKFP 332 (549)
Q Consensus 254 ~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~G-e~l~~~~~~~~~~~~~ 332 (549)
.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+.. .....+++++.+.++| .+...++.+++.+.
T Consensus 242 ~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-- 318 (540)
T PRK06164 242 GALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR-- 318 (540)
T ss_pred HHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--
Confidence 9999999999998899999999999999999999999999998862 2345678899887766 55556677776665
Q ss_pred CCcEEcccCccccccceecccCcC-CCCCCCcccccc-CCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCcccc
Q 008895 333 KVVLVQAYGLTESTAGVFRTVGPD-ECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVT 410 (549)
Q Consensus 333 ~~~l~~~yG~tE~~~~~~~~~~~~-~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~ 410 (549)
++.+++.||+||++.+........ ......+.|.++ +++.++|+|++++++++.|+.|||+|+|++++.||+++++.+
T Consensus 319 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t 398 (540)
T PRK06164 319 GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDAT 398 (540)
T ss_pred CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhh
Confidence 788999999999987655432211 122234567775 899999999889999999999999999999999999999999
Q ss_pred ccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeC
Q 008895 411 SATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQ 490 (549)
Q Consensus 411 ~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~ 490 (549)
...|..++||+|||+|+++++|.+++.||.+|++|++|++|+|.+||++|.++++|.+++|++.+. ..++.++++++..
T Consensus 399 ~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~-~~~~~~~~~vv~~ 477 (540)
T PRK06164 399 ARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR-DGKTVPVAFVIPT 477 (540)
T ss_pred hhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-CCceeEEEEEEeC
Confidence 999988999999999999999999999999999999999999999999999999999999999884 3457889999987
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCC---cccHHHHHcccCc
Q 008895 491 PHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAG---KILRMELRKVAVP 542 (549)
Q Consensus 491 ~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~G---Kv~r~~l~~~~~~ 542 (549)
++...+.+++.++++++|+++++|..|++++++|+|++| |++|++|++++.+
T Consensus 478 ~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~ 532 (540)
T PRK06164 478 DGASPDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQA 532 (540)
T ss_pred CCCCCCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHH
Confidence 766678899999999999999999999999999999999 9999999998654
No 78
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-66 Score=549.44 Aligned_cols=492 Identities=21% Similarity=0.272 Sum_probs=400.5
Q ss_pred CCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHH
Q 008895 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (549)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~ 115 (549)
.+.++.+.|...++++ |+++|+++. ++.+||+||.++++++|.+|.+ .|+++|++|+++++|+.+++++++||
T Consensus 35 ~~~tl~~~l~~~a~~~----p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~V~i~~~n~~~~v~~~lA~ 107 (600)
T PRK08279 35 SKRSLGDVFEEAAARH----PDRPALLFE--DQSISYAELNARANRYAHWAAA-RGVGKGDVVALLMENRPEYLAAWLGL 107 (600)
T ss_pred CcccHHHHHHHHHHhC----CCCcEEEeC--CCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 3479999999999999 999999987 7899999999999999999999 89999999999999999999999999
Q ss_pred HHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCeEEEecC-------CchhhhhcccCCCc-
Q 008895 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRTILIDS-------PEFDSMTMSWNSKH- 182 (549)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~~~~-------~~~~~~~~~~~~~~- 182 (549)
+++|++++|+++..+.+++.++++.++++++|++.+....+... ....+.+.. ..+.++........
T Consensus 108 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (600)
T PRK08279 108 AKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPT 187 (600)
T ss_pred HhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCc
Confidence 99999999999999999999999999999999998766654422 111122211 11222221111000
Q ss_pred --cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHH-HHHHhhhc
Q 008895 183 --ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF-CFRAAALM 259 (549)
Q Consensus 183 --~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~l~~g 259 (549)
.........+++++++|||||||.||+|.++|+++.+++......+ ...+.++++..+|++|.+++.. .+.++..|
T Consensus 188 ~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 266 (600)
T PRK08279 188 TNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-RLTPDDVLYCCLPLYHNTGGTVAWSSVLAAG 266 (600)
T ss_pred cCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-CCCCCcEEEEecCchhhhhHHHHHHHHHhcC
Confidence 1111234568899999999999999999999999999888777665 5778899999999999999854 45667788
Q ss_pred cEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
+++++.+.+++..+++.+.++++|++.++|+++..++...........++|. ++|++++++++++|.+.++...+++.
T Consensus 267 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~--~~g~~l~~~~~~~~~~~~~~~~l~~~ 344 (600)
T PRK08279 267 ATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRL--MIGNGLRPDIWDEFQQRFGIPRILEF 344 (600)
T ss_pred cEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeE--EecCCCCHHHHHHHHHHhCcceeeee
Confidence 8888888899999999999999999999999999988765444444566665 45888999999999999966679999
Q ss_pred cCccccccceecccCcCCCCCCCccccccC----CcEEEEEcCCC----------CCcCCCCCcceEE--EecCCccccc
Q 008895 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSA----GLEAKIVDPET----------GDSLPPGKEGELS--IRGPTIMKGY 403 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~----~~~~~i~d~~~----------~~~~~~g~~Gel~--v~g~~~~~gy 403 (549)
||+||++...... ....+++|.+.+ +..+...+.+. ...++.|+.|||+ ++|+.++.||
T Consensus 345 YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY 419 (600)
T PRK08279 345 YAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY 419 (600)
T ss_pred ecccccceeeccc-----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc
Confidence 9999987543321 123456776655 33332222111 1357889999998 7799999999
Q ss_pred CCCccccccccC------CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCC
Q 008895 404 VGEPEVTSATLL------PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDE 477 (549)
Q Consensus 404 ~~~~~~~~~~~~------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~ 477 (549)
++++.+...|. .++||+|||+|+++++|.+++.||.||+||++|++|+|.+||++|.++|+|.+|+|+++++.
T Consensus 420 -~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~ 498 (600)
T PRK08279 420 -TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVEVP 498 (600)
T ss_pred -CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEeecC
Confidence 88887776653 25799999999999999999999999999999999999999999999999999999998765
Q ss_pred CC-CceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 478 EA-GQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 478 ~~-~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
.. +...+++++..++...+.++++++++++|++|++|..|+++++||+|++||++|++|++++...
T Consensus 499 ~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 499 GTDGRAGMAAIVLADGAEFDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred CCCCccceeEEEecCCccCCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 43 4445566665555566889999999999999999999999999999999999999999988766
No 79
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.8e-65 Score=543.38 Aligned_cols=492 Identities=27% Similarity=0.430 Sum_probs=410.1
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|...++++ |+++|+++. ++++||.||.++++++|+.|+...|+++|++|+++++|+.++++++|||++
T Consensus 25 ~~~~~~l~~~~~~~----~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 98 (560)
T PRK08751 25 RTVAEVFATSVAKF----ADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLR 98 (560)
T ss_pred CcHHHHHHHHHHhC----CCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 58999999999999 999999987 789999999999999999997338999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhc----CCCe-EEEecCC-----------------------
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHR-TILIDSP----------------------- 169 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~-~~~~~~~----------------------- 169 (549)
+|++++|++|.++.+++.++++.++++++++++.....+.. .... ++..+..
T Consensus 99 ~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (560)
T PRK08751 99 AGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVP 178 (560)
T ss_pred hCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998876554432 1111 1111100
Q ss_pred --------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCC---CCC-CCcEE
Q 008895 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP---KRV-SPAVM 237 (549)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---~~~-~~~~~ 237 (549)
.+.+...... ..........+++.++++|||||||.||+|.++|.++..........+. ... ..+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (560)
T PRK08751 179 EYRINGAIRFREALALGR-KHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVV 257 (560)
T ss_pred ccCCCccccHHHHHhccC-CCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceE
Confidence 0011100000 0001112235678999999999999999999999999887765444331 122 24577
Q ss_pred EEecChhhHHHHH-HHHHHhhhccEEEEe-cCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEe
Q 008895 238 LFTMPYFHIYGLF-FCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACG 315 (549)
Q Consensus 238 ~~~~pl~~~~g~~-~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~ 315 (549)
+..+|++|.+++. ..+.++..|++.++. ..+++..+++.+.++++|++..+|.++..+.+.......+++++|.+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~g 337 (560)
T PRK08751 258 ITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGG 337 (560)
T ss_pred EEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeC
Confidence 8889999999883 345566666665554 45789999999999999999999999999988765555678899999999
Q ss_pred cCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEe
Q 008895 316 AAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIR 395 (549)
Q Consensus 316 Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 395 (549)
|+++++.+.+.|++.+ ++.+++.||+||++..+..... ......+++|.|++++.++++| ++++.++.|+.|||+|+
T Consensus 338 G~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~ 414 (560)
T PRK08751 338 GMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPL-TLKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCIK 414 (560)
T ss_pred CCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccc-cccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEe
Confidence 9999999999999988 7889999999999876654322 2223457899999999999999 67899999999999999
Q ss_pred cCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeec
Q 008895 396 GPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYP 475 (549)
Q Consensus 396 g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~ 475 (549)
|+.++.||+++++.+...|..+|||+|||+|+++++|++++.||.+|+++++|.+|+|.+||++|..+++|.+++|++++
T Consensus 415 ~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~ 494 (560)
T PRK08751 415 GPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLEVAAVGVP 494 (560)
T ss_pred cCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCeeeeEEEecC
Confidence 99999999999999988887789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 476 DEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 476 ~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
+...++.++++++.. ....+.++++++++++++.+++|..++++++||+|++||++|++|++..
T Consensus 495 ~~~~ge~~~~~v~~~-~~~~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~~ 558 (560)
T PRK08751 495 DEKSGEIVKVVIVKK-DPALTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDAA 558 (560)
T ss_pred CCCCCceEEEEEEcC-CCCCCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHhh
Confidence 887788888777754 3456788999999999999999999999999999999999999999874
No 80
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-65 Score=540.85 Aligned_cols=498 Identities=23% Similarity=0.360 Sum_probs=413.1
Q ss_pred CCCCHHHHHhhcccCCCCCCCCCcEEEEC--CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHH
Q 008895 36 APISAVDYVSSLRATLPWRDDDTVALINS--VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (549)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~--~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~l 113 (549)
.++++.+++...++++ |++++++.. ...+++||.||.++++++|++|++ .|+++||+|+++++|+.+++++++
T Consensus 8 ~~~~~~~~~~~~a~~~----~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~v~i~~~~~~~~~~~~l 82 (542)
T PRK06018 8 WPLLCHRIIDHAARIH----GNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDR-DGIKLGDRVATIAWNTWRHLEAWY 82 (542)
T ss_pred CCCCHHHHHHHHHHhC----CCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHH
Confidence 3489999999999999 999999853 223789999999999999999999 899999999999999999999999
Q ss_pred HHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CC-eEEEecCC------------chhhhh
Q 008895 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSP------------EFDSMT 175 (549)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~------------~~~~~~ 175 (549)
||+++|++++|++|..+.+++..+++.+++++++++......+.+. .. ..+.+... .+.++.
T Consensus 83 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (542)
T PRK06018 83 GIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWI 162 (542)
T ss_pred HHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHh
Confidence 9999999999999999999999999999999999998766554321 11 12222111 122221
Q ss_pred cccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHH-HHHHH-hhccCCCCCCCcEEEEecChhhHHHHHHHH
Q 008895 176 MSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLT-AAVAS-SFASSPKRVSPAVMLFTMPYFHIYGLFFCF 253 (549)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~-~~~~~-~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~ 253 (549)
..... ........++++++++|||||||.||+|.++|++.+ ..... ....+ ....+++++..+|++|.+++...+
T Consensus 163 ~~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~h~~~~~~~~ 239 (542)
T PRK06018 163 AEADG--DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-GTSAADTMLPVVPLFHANSWGIAF 239 (542)
T ss_pred ccCCc--ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-CCCCCCEEEEecCHHHHhhhHHHH
Confidence 11110 111123455779999999999999999999999743 22222 22233 467788999999999999887667
Q ss_pred HHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCC
Q 008895 254 RAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (549)
Q Consensus 254 ~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~ 332 (549)
.++..|+++++.. .+++..+++.++++++|+++++|+++..+.+.......+++++|.++++|++++++++++|++ +
T Consensus 240 ~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~- 317 (542)
T PRK06018 240 SAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M- 317 (542)
T ss_pred hhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-
Confidence 7888999988764 578899999999999999999999999998877655667889999999999999999999999 6
Q ss_pred CCcEEcccCccccccceecccCcCC---------CCCCCccccccCCcEEEEEcCCCCCcCCCC--CcceEEEecCCccc
Q 008895 333 KVVLVQAYGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGLEAKIVDPETGDSLPPG--KEGELSIRGPTIMK 401 (549)
Q Consensus 333 ~~~l~~~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~ 401 (549)
++.+++.||+||++.++........ .....+.|+|.++++++|+| ++++.++.+ ..|||+++|+.++.
T Consensus 318 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~ 396 (542)
T PRK06018 318 GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAA 396 (542)
T ss_pred CCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcch
Confidence 8899999999999876554321110 01135789999999999999 567777653 67999999999999
Q ss_pred ccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCc
Q 008895 402 GYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQ 481 (549)
Q Consensus 402 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~ 481 (549)
||++. +...+..++||+|||+++++++|++++.||.+|+++.+|.+|++.+||.++.++|+|.+|+|++.++...++
T Consensus 397 gy~~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~ 473 (542)
T PRK06018 397 AYYRV---DGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDE 473 (542)
T ss_pred hhhcC---cccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCc
Confidence 99984 233455689999999999999999999999999999999999999999999999999999999999888788
Q ss_pred eeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCCCc
Q 008895 482 MPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGSSC 547 (549)
Q Consensus 482 ~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~ 547 (549)
.+.++++..++...+.+++.++++++++.+++|..+.++++||+|++||++|++|++++.+-.++.
T Consensus 474 ~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~~~~~ 539 (542)
T PRK06018 474 RPLLIVQLKPGETATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDYKLPT 539 (542)
T ss_pred eeEEEEEeCCCCCCCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhccCCCC
Confidence 999999988777778899999999999999999999999999999999999999999998765543
No 81
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-66 Score=642.67 Aligned_cols=489 Identities=21% Similarity=0.309 Sum_probs=421.3
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.++|.++++++ |+++|++++ ++.+||+||.++++++|++|.+ .|+++|++|++++++++++++++|||++
T Consensus 1574 ~~~~~~~~~~a~~~----p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~~~~V~l~~~~s~~~vv~~lavlk 1646 (3956)
T PRK12467 1574 RLVHQLIEDQAAAT----PEAVALVFG--EQELTYGELNRRANRLAHRLIA-LGVGPEVLVGIAVERSLEMVVGLLAILK 1646 (3956)
T ss_pred ccHHHHHHHHHHhC----CCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEccCCHHHHHHHHHhhc
Confidence 57999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-CCeEEEecCCchhhhhcccCCCccccccccCCCCEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (549)
+|++++|++|.++.+++.+++++++++++|++......+... ....+.++... ....... . ........++++++
T Consensus 1647 aG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~-~~~~~~~~~~~~ay 1722 (3956)
T PRK12467 1647 AGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQED--DWLEGYS-D-SNPAVNLAPQNLAY 1722 (3956)
T ss_pred cCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEecccc--chhccCC-C-CCCCCCCCCcCcEE
Confidence 999999999999999999999999999999988765554322 22344443221 1111111 0 11222346789999
Q ss_pred EEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC---cCHHHH
Q 008895 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMM 273 (549)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~---~~~~~~ 273 (549)
++|||||||.||||+++|+++.+.+......+ .....++++...|+.|..+++.++.++..|+++++.++ .++..+
T Consensus 1723 iiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l 1801 (3956)
T PRK12467 1723 VIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-QLSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQL 1801 (3956)
T ss_pred EEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-CCCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHH
Confidence 99999999999999999999999888877766 46788999999999999999889999999999999763 578999
Q ss_pred HHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceeccc
Q 008895 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (549)
Q Consensus 274 ~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 353 (549)
++.|+++++|+++++|+++..|..... ....++++|.+++|||++++++.+.|.+.+++..++|.||+||++..+....
T Consensus 1802 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~ 1880 (3956)
T PRK12467 1802 IQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWT 1880 (3956)
T ss_pred HHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEe
Confidence 999999999999999999999987422 2345789999999999999999999999988888999999999987665432
Q ss_pred Cc---CCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC-------CCeeecC
Q 008895 354 GP---DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTG 423 (549)
Q Consensus 354 ~~---~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-------~~~~~TG 423 (549)
.. .......++|+|++|++++|+| +.+++++.|..|||+|+|+++++||+++|+.|.++|.. ++||+||
T Consensus 1881 ~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTG 1959 (3956)
T PRK12467 1881 CRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTG 1959 (3956)
T ss_pred ccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceecc
Confidence 21 1122346899999999999999 78899999999999999999999999999999998853 3599999
Q ss_pred ceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCC--------
Q 008895 424 DLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSL-------- 495 (549)
Q Consensus 424 D~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~-------- 495 (549)
|+|++++||.++++||+||+||++|++|+|.|||++|.++|+|.+++|++.+ ...++.++++++.......
T Consensus 1960 Dl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~~~-~~~~~~lva~vv~~~~~~~~~~~~~~~ 2038 (3956)
T PRK12467 1960 DLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVVIAQD-GANGKQLVAYVVPTDPGLVDDDEAQVA 2038 (3956)
T ss_pred ceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEEEEec-CCCCcEEEEEEEecCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999986 4456789999987654321
Q ss_pred CHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 496 NEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 496 ~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
..++++++++++|+.|++|..++++++||+|++|||||++|++...
T Consensus 2039 ~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~GKidr~~L~~~~~ 2084 (3956)
T PRK12467 2039 LRAILKNHLKASLPEYMVPAHLVFLARMPLTPNGKLDRKALPAPDA 2084 (3956)
T ss_pred cHHHHHHHHHhhCchhhCchhhhhhhcCCCCCCCCcchhhCCCCcc
Confidence 3468999999999999999999999999999999999999987654
No 82
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-66 Score=540.67 Aligned_cols=476 Identities=28% Similarity=0.395 Sum_probs=390.4
Q ss_pred hcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccC
Q 008895 46 SLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA 125 (549)
Q Consensus 46 ~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l 125 (549)
.+++++ |+++|+++..+++++||+||.++++++|+.|.+ +|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 5 ~~a~~~----p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~-~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 5 THAQIA----PDRPAVIVAETGEQVSYRQLDDDSAALARVLYD-AGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhhhC----CCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 345566 999999875457899999999999999999998 899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCC--e-EEEecCC-----chhhhhcccCCCccccccccCCCCEEEE
Q 008895 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKH--R-TILIDSP-----EFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (549)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~--~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (549)
++.++.+++.+++..++++++++++........... . .+.+... .+++..... . .......+.+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~a~i 153 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGFGSFEAALAGA----G--PRLTEQPCGAVM 153 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCcccccccHHHHhccc----C--CCCCCCcccEEE
Confidence 999999999999999999999998755433221111 1 1111110 111111100 0 001122356999
Q ss_pred EccCCCCCccchhhh--cHHHHHHHHH---H-hhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHH
Q 008895 198 MYSSGTTGRVKGVML--THRNLTAAVA---S-SFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLK 271 (549)
Q Consensus 198 ~~TSGtTG~pK~v~~--t~~~l~~~~~---~-~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~ 271 (549)
+|||||||.||+|.+ +|.++..... . ....+ .....++++..+|++|.+++......+..|+++++.+.+++.
T Consensus 154 ~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (501)
T PRK13390 154 LYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-DISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQ 232 (501)
T ss_pred EeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-CCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcCCcCHH
Confidence 999999999999995 4555443211 1 11122 356788999999999999885555567789999988888999
Q ss_pred HHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccce
Q 008895 272 MMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGV 349 (549)
Q Consensus 272 ~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~ 349 (549)
.+++.|+++++|+++++|+++..+++.... ....++++|.+++||+++++++.+.+.+.+ +..+++.||+||++.++
T Consensus 233 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 311 (501)
T PRK13390 233 ATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMT 311 (501)
T ss_pred HHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceE
Confidence 999999999999999999999988865432 334578999999999999999999999988 67899999999998754
Q ss_pred ecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC--CCeeecCceEE
Q 008895 350 FRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP--DGWMRTGDLCY 427 (549)
Q Consensus 350 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~~~ 427 (549)
.... .......+++|+|+++ .++|+| +++++++.|+.|||+|+|++++.||+++++.+...+.+ ++|++|||+|+
T Consensus 312 ~~~~-~~~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~ 388 (501)
T PRK13390 312 FIDS-PDWLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGS 388 (501)
T ss_pred Eecc-hhhccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEE
Confidence 4322 1122345789999999 799999 77899999999999999999999999999998887753 57999999999
Q ss_pred EecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCC---HHHHHHHH
Q 008895 428 IDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLN---EAEIMEFV 504 (549)
Q Consensus 428 ~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~---~~~i~~~l 504 (549)
+|++|++++.||.||++|.+|++|+|.+||++|.++|+|.+++|+++++...++.+++++++.++...+ .+++.+++
T Consensus 389 ~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~ 468 (501)
T PRK13390 389 VDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYT 468 (501)
T ss_pred ECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988889999998876543322 46899999
Q ss_pred HhcCCCCCcccEEEEeCccCCCCCCcccHHHHH
Q 008895 505 ARQVSPYKKIRRVAFINAIPKSAAGKILRMELR 537 (549)
Q Consensus 505 ~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~ 537 (549)
+++|+.+++|..++++++||+|++||++|++|+
T Consensus 469 ~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 469 RSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred HHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 999999999999999999999999999999985
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=8.8e-66 Score=590.19 Aligned_cols=492 Identities=25% Similarity=0.339 Sum_probs=417.9
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.+.+.++++ |+++|+++. .++++||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||++
T Consensus 615 ~~l~~~~~~~a~~~----p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~--~~~~g~~V~i~~~n~~~~~~~~la~~~ 687 (1146)
T PRK08633 615 PPLAEAWIDTAKRN----WSRLAVADS-TGGELSYGKALTGALALARLLKR--ELKDEENVGILLPPSVAGALANLALLL 687 (1146)
T ss_pred CCHHHHHHHHHHhc----CCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH--hCCCCCeEEEECCCchHHHHHHHHHHH
Confidence 57888998888888 999999874 35799999999999999999987 479999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC--------CCeEEEecCC--------chhhhhcccCCC
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL--------KHRTILIDSP--------EFDSMTMSWNSK 181 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--------~~~~~~~~~~--------~~~~~~~~~~~~ 181 (549)
+|++++|++|..+.+++.+++++++++++++++...+.+.+. ...++..+.. .+..........
T Consensus 688 ~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (1146)
T PRK08633 688 AGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLP 767 (1146)
T ss_pred cCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCC
Confidence 999999999999999999999999999999998776665421 1123322211 011110000000
Q ss_pred c----cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHH-HHHHHh
Q 008895 182 H----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF-FCFRAA 256 (549)
Q Consensus 182 ~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l 256 (549)
. ........++++++++|||||||.||+|.++|+++..+.......+ ...++|++++.+|++|.+|+. ..+.++
T Consensus 768 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l 846 (1146)
T PRK08633 768 ARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-NLRNDDVILSSLPFFHSFGLTVTLWLPL 846 (1146)
T ss_pred HHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-CCCCCCEEEEcCcHHHHHhHHHHHHHHH
Confidence 0 0001234678999999999999999999999999998887776666 467789999999999999984 477889
Q ss_pred hhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCc
Q 008895 257 ALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVV 335 (549)
Q Consensus 257 ~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~ 335 (549)
..|++++..+ .+++..+++.++++++|++.++|++++.+.+.......+++++|.+++||+++++++.+++++.+ +++
T Consensus 847 ~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~ 925 (1146)
T PRK08633 847 LEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIR 925 (1146)
T ss_pred HCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCC
Confidence 9999988866 47899999999999999999999999999887665666789999999999999999999999998 789
Q ss_pred EEcccCccccccceecccCcC--------CCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCc
Q 008895 336 LVQAYGLTESTAGVFRTVGPD--------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEP 407 (549)
Q Consensus 336 l~~~yG~tE~~~~~~~~~~~~--------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~ 407 (549)
+++.||+||++.++....... .....+++|+|+||++++|+|++++++++.|+.|||+++|+.++.||++++
T Consensus 926 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~ 1005 (1146)
T PRK08633 926 ILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGDP 1005 (1146)
T ss_pred eecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCCc
Confidence 999999999987665432211 112457899999999999999889999999999999999999999999999
Q ss_pred cccccccCC---CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCC--CcceEEEEeecCCCCCce
Q 008895 408 EVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHR--EVADAAVIPYPDEEAGQM 482 (549)
Q Consensus 408 ~~~~~~~~~---~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~--~v~~~~vv~~~~~~~~~~ 482 (549)
+.+.+.+.+ ++||+|||+|++|+||++++.||.||++|++|++|+|.|||++|.+|| .+.+++|++++++..++.
T Consensus 1006 ~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~ 1085 (1146)
T PRK08633 1006 EKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEK 1085 (1146)
T ss_pred cchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcE
Confidence 998887743 289999999999999999999999999999999999999999999998 567899999999888899
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHh-cCCCCCcccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 483 PMAFVVRQPHSSLNEAEIMEFVAR-QVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 483 ~~~~v~~~~~~~~~~~~i~~~l~~-~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
++++++.. ..+.+++++++++ +++++++|..+++++++|+|++||+||++|++++.
T Consensus 1086 ~~~~v~~~---~~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~ 1142 (1146)
T PRK08633 1086 LVVLHTCG---AEDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELAL 1142 (1146)
T ss_pred EEEEEecC---ccCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHH
Confidence 99988752 3567889998875 69999999999999999999999999999998754
No 84
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-65 Score=529.43 Aligned_cols=453 Identities=29% Similarity=0.420 Sum_probs=389.4
Q ss_pred CCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHH
Q 008895 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (549)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~ 135 (549)
++++|++++ ++++||.||.++++++|..|+. +|+|+++++|++++++++|||+++|++++|+++..+.+++.
T Consensus 14 ~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~------~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 85 (471)
T PRK07787 14 DIADAVRIG--GRVLSRSDLAGAATAVAERVAG------ARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERR 85 (471)
T ss_pred CCceEEEeC--CcEEEHHHHHHHHHHHHHHhcc------CCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHH
Confidence 889999987 8899999999999999999873 68999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHH
Q 008895 136 RQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHR 215 (549)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~ 215 (549)
++++++++++++++..... . ......+.... ... . ......+++.++++|||||||.||+|.++|+
T Consensus 86 ~~l~~~~~~~il~~~~~~~--~--~~~~~~~~~~~-----~~~----~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~ 151 (471)
T PRK07787 86 HILADSGAQAWLGPAPDDP--A--GLPHVPVRLHA-----RSW----H-RYPEPDPDAPALIVYTSGTTGPPKGVVLSRR 151 (471)
T ss_pred HHHHhcCCCEEEecCCccc--c--cccceeeeccc-----ccc----c-cCCCCCCCceEEEEECCCCCCCCCEEEEeHH
Confidence 9999999999999764210 0 11111111000 000 0 0112356889999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHH
Q 008895 216 NLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (549)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~ 294 (549)
++..++......+ ....+++++..+|++|.+|+ ..++.++..|++++....+++..+++.++ +++|+++++|+++..
T Consensus 152 ~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~ 229 (471)
T PRK07787 152 AIAADLDALAEAW-QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSR 229 (471)
T ss_pred HHHHHHHHHHHhc-CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHH
Confidence 9998887766666 46778899999999999988 55788999999999988889999999999 999999999999999
Q ss_pred HHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEE
Q 008895 295 MSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAK 374 (549)
Q Consensus 295 l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 374 (549)
+++.... ...++++|.+++||+++++++.+++.+.+ +..+++.||+||++...... .......+++|+|++++.++
T Consensus 230 l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~~~~~~~~~vG~~~~g~~~~ 305 (471)
T PRK07787 230 IAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTR--ADGERRPGWVGLPLAGVETR 305 (471)
T ss_pred HHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecC--CCCcccCCcccccCCCcEEE
Confidence 8875432 34578999999999999999999999988 78899999999998654432 22233457899999999999
Q ss_pred EEcCCCCCcCC-CC-CcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEccc-CCeeeeCcEee
Q 008895 375 IVDPETGDSLP-PG-KEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRL-KDLIKYKGYQV 451 (549)
Q Consensus 375 i~d~~~~~~~~-~g-~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~-~d~i~~~G~~v 451 (549)
|+|+ ++.+++ .+ ..|||+++|++++.||+++++.+...|..++||+|||+|+++++|.+++.||+ |++++.+|++|
T Consensus 306 i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v 384 (471)
T PRK07787 306 LVDE-DGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRI 384 (471)
T ss_pred EECC-CCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEE
Confidence 9994 467776 34 37999999999999999999999999988999999999999999999999996 88999999999
Q ss_pred ChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcc
Q 008895 452 APAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKI 531 (549)
Q Consensus 452 ~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv 531 (549)
+|.+||++|.+++.|.+++|++.++...++.++++++.. ...+.+++.++++++|+++++|..++++++||+|++||+
T Consensus 385 ~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~--~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi 462 (471)
T PRK07787 385 GAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGA--DDVAADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKV 462 (471)
T ss_pred CHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeC--CCCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccc
Confidence 999999999999999999999999888888999999873 346788999999999999999999999999999999999
Q ss_pred cHHHHHcc
Q 008895 532 LRMELRKV 539 (549)
Q Consensus 532 ~r~~l~~~ 539 (549)
+|++|+++
T Consensus 463 ~r~~L~~~ 470 (471)
T PRK07787 463 LKKQLLSE 470 (471)
T ss_pred cHHHhccC
Confidence 99999875
No 85
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.6e-64 Score=529.93 Aligned_cols=489 Identities=23% Similarity=0.337 Sum_probs=413.2
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
+|+.+.|.+.+..+ |+++|+.+. +.++||.||.++++++|..|.+ .|+.+|++|+++++|+.++++++|||++
T Consensus 2 ~~~~~~l~~~a~~~----p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~-~g~~~~~~v~~~~~~~~~~~~~~~a~~~ 74 (503)
T PRK04813 2 MDIIETIEEFAQTQ----PDFPAYDYL--GEKLTYGQLKEDSDALAAFIDS-LKLPDKSPIIVFGHMSPEMLATFLGAVK 74 (503)
T ss_pred chHHHHHHHHHHhC----CCceEEEeC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 57889999999888 999999987 7899999999999999999999 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (549)
+|++++|+++..+.+.+..+++..++++++++..... .......+..+ .+.+..... ..........+++.+++
T Consensus 75 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~i 148 (503)
T PRK04813 75 AGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPL--EILGIPVITLD--ELKDIFATG--NPYDFDHAVKGDDNYYI 148 (503)
T ss_pred cCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccc--cccCCcEEehH--Hhhhhhhcc--ccccccccCCCCCcEEE
Confidence 9999999999999999999999999999999876521 11112222211 111111100 00111223456889999
Q ss_pred EccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC---cCHHHHH
Q 008895 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMML 274 (549)
Q Consensus 198 ~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~---~~~~~~~ 274 (549)
+|||||||.||+|.++|+++..........+ .....++++...|++|..++...+.++..|++++..+. .++..++
T Consensus 149 ~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~ 227 (503)
T PRK04813 149 IFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-ALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLF 227 (503)
T ss_pred EECCCCCCCCcEEEeehHHHHHHHHHHHHHc-CCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHH
Confidence 9999999999999999999998887766666 46778899999999999988888899999999988764 5789999
Q ss_pred HHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccC
Q 008895 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (549)
Q Consensus 275 ~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~ 354 (549)
+.+.+++++++..+|+++..+..........++++|.++++|+++++.+.+++.+.++++.+++.||+||++........
T Consensus 228 ~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 307 (503)
T PRK04813 228 ETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEI 307 (503)
T ss_pred HHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEe
Confidence 99999999999999999988766544445568899999999999999999999999988999999999999765443221
Q ss_pred cC---CCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC-C--CeeecCceEEE
Q 008895 355 PD---ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-D--GWMRTGDLCYI 428 (549)
Q Consensus 355 ~~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-~--~~~~TGD~~~~ 428 (549)
.. ......++|.+.++++++|+| +++.+++.|+.|||+|+|+.++.||+++++.+...|.. + +||+|||+|++
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~ 386 (503)
T PRK04813 308 TDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL 386 (503)
T ss_pred cccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe
Confidence 11 123445799999999999999 77899999999999999999999999999988887643 3 49999999999
Q ss_pred ecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCC----CHHHHHHHH
Q 008895 429 DEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSL----NEAEIMEFV 504 (549)
Q Consensus 429 ~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~----~~~~i~~~l 504 (549)
++|++++.||.+|+++.+|++|++.+||+++..+|+|.+++|++.++...++.+++++++.++... -..++.+++
T Consensus 387 -~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~ 465 (503)
T PRK04813 387 -EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKEL 465 (503)
T ss_pred -eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999998777677888999887654211 124689999
Q ss_pred HhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 505 ARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 505 ~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+++++++++|..++++++||+|++||++|++|++++.+
T Consensus 466 ~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 503 (503)
T PRK04813 466 KERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVNK 503 (503)
T ss_pred HhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhcC
Confidence 99999999999999999999999999999999998753
No 86
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.3e-65 Score=548.05 Aligned_cols=488 Identities=20% Similarity=0.258 Sum_probs=389.0
Q ss_pred CCCCHHHHHhhcccCCCCCCCCCcEEEECC---CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHH
Q 008895 36 APISAVDYVSSLRATLPWRDDDTVALINSV---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (549)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~---~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~ 112 (549)
.+.++.+.|.+.++++ |+++|+++.. ..+++||+||.++++++|++|.+ .|+++||+|+++++|++++++++
T Consensus 37 ~~~~l~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~Gv~~gd~Vai~~~n~~e~~~~~ 111 (614)
T PRK08180 37 YPRRLTDRLVHWAQEA----PDRVFLAERGADGGWRRLTYAEALERVRAIAQALLD-RGLSAERPLMILSGNSIEHALLA 111 (614)
T ss_pred cCccHHHHHHHHHHHC----CCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHH
Confidence 3479999999999999 9999998641 12689999999999999999998 89999999999999999999999
Q ss_pred HHHHHcCCeEccCCCCCC-----HHHHHHHHhhcCCeEEEEcCcc--HHHHhc---CCCeEEEecC-------Cchhhhh
Q 008895 113 FSLLSLGVIISPANPVNT-----ESEISRQIQLSNPVIAFATSSV--VHKLAK---LKHRTILIDS-------PEFDSMT 175 (549)
Q Consensus 113 la~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~--~~~~~~---~~~~~~~~~~-------~~~~~~~ 175 (549)
|||+++|++++|++|.++ .+++.+++++++++++|+++.. ...+.. .....+..+. ..+.++.
T Consensus 112 lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 191 (614)
T PRK08180 112 LAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALL 191 (614)
T ss_pred HHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHh
Confidence 999999999999999988 7999999999999999998642 222221 1223333321 1233332
Q ss_pred cccCCCc-cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCC-CCCcEEEEecChhhHHHH-HHH
Q 008895 176 MSWNSKH-ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKR-VSPAVMLFTMPYFHIYGL-FFC 252 (549)
Q Consensus 176 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~~~~~~~~~pl~~~~g~-~~~ 252 (549)
....... ........++++++|+|||||||.||+|++||+++.++.......+... ...+++++.+|++|.+|+ ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~ 271 (614)
T PRK08180 192 ATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNL 271 (614)
T ss_pred ccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHH
Confidence 2111000 0111234578999999999999999999999999998887765555321 256899999999999987 566
Q ss_pred HHHhhhccEEEEecC-cC---HHHHHHHHHHhceeeeeecHHHHHHHHhCCCC----CCCCCCCceEEEEecCCCCHHHH
Q 008895 253 FRAAALMETAVVMQR-FD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST----DGYDLSSLETVACGAAPLGKDTI 324 (549)
Q Consensus 253 ~~~l~~g~~~~~~~~-~~---~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~----~~~~l~~lr~v~~~Ge~l~~~~~ 324 (549)
+.++..|+++++.+. ++ ...+++.++++++|+++++|.++..|++.... ....++++|.+++||+++++++.
T Consensus 272 ~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~ 351 (614)
T PRK08180 272 GIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVW 351 (614)
T ss_pred HHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHH
Confidence 788999999988652 33 35778889999999999999999888764321 22347899999999999999999
Q ss_pred HHHHHh----CC-CCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCc
Q 008895 325 MAFASK----FP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTI 399 (549)
Q Consensus 325 ~~~~~~----~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~ 399 (549)
+++.+. ++ ++.+++.||+||++.++..... .....+++|+|++|++++++|+ +..|||+|+|+++
T Consensus 352 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~--~~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v 421 (614)
T PRK08180 352 DRLDRVAEATCGERIRMMTGLGMTETAPSATFTTG--PLSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNV 421 (614)
T ss_pred HHHHHHHHhhcCCCceeeeeecccccCCceEeccc--ccCCCCcccCccCCcEEEEecC--------CCCcEEEEecCcc
Confidence 999875 32 3789999999999876654322 2345689999999999999883 3469999999999
Q ss_pred ccccCCCccccccccCCCCeeecCceEEE----ecCCeEEEEcccCCeeee-CcEeeC--hHHHHHHHHcCCCcceEEEE
Q 008895 400 MKGYVGEPEVTSATLLPDGWMRTGDLCYI----DEDGFLFIVDRLKDLIKY-KGYQVA--PAELEHLLLSHREVADAAVI 472 (549)
Q Consensus 400 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~----~~~g~~~~~GR~~d~i~~-~G~~v~--~~~IE~~l~~~~~v~~~~vv 472 (549)
+.||+++|+.+...|..+|||+|||+|++ |++|++++.||++|++++ +|++|+ +.|+|.++.+||.|.+++|+
T Consensus 422 ~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~ 501 (614)
T PRK08180 422 TPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVIT 501 (614)
T ss_pred chhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEE
Confidence 99999999999999978999999999999 468999999999999986 798776 77888999999999999999
Q ss_pred eecCCCCCceeEEEEEeCCCC---------------CCCHHHHHHHHHhcCCCCC--------cccEEEEeCccCCCC--
Q 008895 473 PYPDEEAGQMPMAFVVRQPHS---------------SLNEAEIMEFVARQVSPYK--------KIRRVAFINAIPKSA-- 527 (549)
Q Consensus 473 ~~~~~~~~~~~~~~v~~~~~~---------------~~~~~~i~~~l~~~l~~~~--------~p~~i~~v~~lP~t~-- 527 (549)
+.+++ .+.++|++.++. ..+.+++++++++.|..++ +|+.+++++++|+|+
T Consensus 502 g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~g 577 (614)
T PRK08180 502 GHDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAG 577 (614)
T ss_pred cCCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccC
Confidence 88764 567888876431 1244678888888777666 899999999999865
Q ss_pred ----CCcccHHHHHcccCc
Q 008895 528 ----AGKILRMELRKVAVP 542 (549)
Q Consensus 528 ----~GKv~r~~l~~~~~~ 542 (549)
+||+.|+++.+.|++
T Consensus 578 k~t~~~~~~R~~~~~~y~~ 596 (614)
T PRK08180 578 EITDKGYINQRAVLARRAA 596 (614)
T ss_pred ccCccccccHHHHHHHhHH
Confidence 558888888877643
No 87
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.2e-64 Score=536.63 Aligned_cols=497 Identities=25% Similarity=0.386 Sum_probs=400.8
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
+|....+...+..+ |+++|+.+. +.++||.||.++++++|..|.+ .|+++||+|+++++|+.+++++++||++
T Consensus 20 ~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~-~g~~~gd~V~i~~~n~~~~~~~~la~~~ 92 (567)
T PLN02479 20 LTPLWFLERAAVVH----PTRKSVVHG--SVRYTWAQTYQRCRRLASALAK-RSIGPGSTVAVIAPNIPAMYEAHFGVPM 92 (567)
T ss_pred cCHHHHHHHHHhhC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHh
Confidence 67888888888888 999999987 6799999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhc------------CCC-eEEEecCC---------------
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------------LKH-RTILIDSP--------------- 169 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~------------~~~-~~~~~~~~--------------- 169 (549)
+|++++|+++..+.+++.++++.++++++++++...+...+ ... .++.+...
T Consensus 93 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
T PLN02479 93 AGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGA 172 (567)
T ss_pred CCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCc
Confidence 99999999999999999999999999999998876543221 011 12222211
Q ss_pred -chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHH
Q 008895 170 -EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYG 248 (549)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g 248 (549)
.+.++....... .........++.++++|||||||.||+|.++|+++..........+ ....+++++..+|++|.++
T Consensus 173 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~~ 250 (567)
T PLN02479 173 IEYEKFLETGDPE-FAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-GMNEGAVYLWTLPMFHCNG 250 (567)
T ss_pred ccHHHHHhccccc-cccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-CCCCCCEEEEecchhhhhh
Confidence 122221111100 0001112234677899999999999999999999876655444444 4567889999999999999
Q ss_pred HHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCC-CCCCCceEEEEecCCCCHHHHHHH
Q 008895 249 LFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG-YDLSSLETVACGAAPLGKDTIMAF 327 (549)
Q Consensus 249 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~-~~l~~lr~v~~~Ge~l~~~~~~~~ 327 (549)
+...+.....++..+....+++..+++.++++++|+++++|+++..+.+...... ..+++++.++++|+++++.+.+++
T Consensus 251 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~ 330 (567)
T PLN02479 251 WCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAM 330 (567)
T ss_pred HHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHH
Confidence 8555444334444555567899999999999999999999999999887643322 257889999999999999999999
Q ss_pred HHhCCCCcEEcccCccccccceecccCcC---------CCCCCCccccccCCcE-EEEEcCCCCCcCCCC--CcceEEEe
Q 008895 328 ASKFPKVVLVQAYGLTESTAGVFRTVGPD---------ECRRWGSTGRLSAGLE-AKIVDPETGDSLPPG--KEGELSIR 395 (549)
Q Consensus 328 ~~~~~~~~l~~~yG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~~-~~i~d~~~~~~~~~g--~~Gel~v~ 395 (549)
.+. +.++++.||+||++..+....... ......+.|.+.++.. ++|+|++++.+++.+ +.|||+++
T Consensus 331 ~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~ 408 (567)
T PLN02479 331 SEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMR 408 (567)
T ss_pred Hhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEe
Confidence 875 789999999999865433221100 0011235677888876 889987778888754 67999999
Q ss_pred cCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeec
Q 008895 396 GPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYP 475 (549)
Q Consensus 396 g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~ 475 (549)
|++++.|||++++.+...| .+|||+|||+|+++++|++++.||.+|+|+.+|++|+|.+||.+|.++|.|.+++|++.+
T Consensus 409 g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~ 487 (567)
T PLN02479 409 GNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARP 487 (567)
T ss_pred ccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEecc
Confidence 9999999999999999988 589999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCceeEEEEEeCCCCC-----CCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCCCc
Q 008895 476 DEEAGQMPMAFVVRQPHSS-----LNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGSSC 547 (549)
Q Consensus 476 ~~~~~~~~~~~v~~~~~~~-----~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~ 547 (549)
+...++.+++++++..... ...++|.++++++|+.++.|+.+.+ ++||+|++||++|+.|++.+.+.+.++
T Consensus 488 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~~~~~ 563 (567)
T PLN02479 488 DERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEMGPVK 563 (567)
T ss_pred chhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhhCCcc
Confidence 8777889999998775432 2357899999999999999998776 789999999999999999887766544
No 88
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=4.1e-64 Score=530.45 Aligned_cols=487 Identities=29% Similarity=0.450 Sum_probs=405.9
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|.+.++.+ |+++|+.+. ++.+||.||.++++++|++|.+ .|+.+|++|+++++|+.+++++++||++
T Consensus 21 ~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~ 93 (541)
T TIGR03205 21 GTLPDLLSKAAADY----GPRPALEFR--DRPITYTELEAMAETAAAALLR-AGYGKDASVALYLGNTPDHPINFFGALK 93 (541)
T ss_pred CCHHHHHHHHHHHc----CCCceEEEC--CcEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 58999999999999 999999886 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc--HHHHhc-----CCCeEEEecCCc-------------------h
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--VHKLAK-----LKHRTILIDSPE-------------------F 171 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~-----~~~~~~~~~~~~-------------------~ 171 (549)
+|++++|++|..+.+++.++++.++++.+++++.. .....+ .....+.++... +
T Consensus 94 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (541)
T TIGR03205 94 AGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTY 173 (541)
T ss_pred cCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccH
Confidence 99999999999999999999999999999998632 111111 011122222111 1
Q ss_pred hhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCC-----CCCCCcEEEEecChhhH
Q 008895 172 DSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-----KRVSPAVMLFTMPYFHI 246 (549)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~pl~~~ 246 (549)
.++.... ..........+++.++++|||||||.||+|.++|+++....... ..+. .....+++++..|++|.
T Consensus 174 ~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~ 250 (541)
T TIGR03205 174 ADFVKGA--AAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHI 250 (541)
T ss_pred HHHHhcC--CCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHH
Confidence 1111100 00111123456889999999999999999999999987655422 1110 12234688999999999
Q ss_pred HHH-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHH
Q 008895 247 YGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIM 325 (549)
Q Consensus 247 ~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~ 325 (549)
+++ ..++.++..|++++....+++..+++.|.++++|++.++|+++..+++........++++|.+++||+++++++.+
T Consensus 251 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~ 330 (541)
T TIGR03205 251 YALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVAN 330 (541)
T ss_pred HHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHH
Confidence 888 4567788899998888888999999999999999999999999998876544445678999999999999999999
Q ss_pred HHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEc-CCCCCcCCCCCcceEEEecCCcccccC
Q 008895 326 AFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVD-PETGDSLPPGKEGELSIRGPTIMKGYV 404 (549)
Q Consensus 326 ~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~g~~Gel~v~g~~~~~gy~ 404 (549)
++.+.+ +..+++.||+||++..+..... ......+++|.|++++.++|++ .+++++++.|+.|||+++|++++.||+
T Consensus 331 ~~~~~~-~~~~~~~YG~TE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~ 408 (541)
T TIGR03205 331 FFERKT-GLKLKSGWGMTETCSPGTGHPP-EGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYW 408 (541)
T ss_pred HHHHHh-CCCeecccccccCCcccccCCC-CCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCcccccc
Confidence 998887 7899999999999876654322 1223457899999999988864 366788999999999999999999999
Q ss_pred CCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeE
Q 008895 405 GEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPM 484 (549)
Q Consensus 405 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~ 484 (549)
++++.+.+.| .++||+|||+++++++|++++.||.||++|++|++|+|.+||+++.++++|.+++|++++++..++.++
T Consensus 409 ~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 487 (541)
T TIGR03205 409 NRPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAK 487 (541)
T ss_pred CChhhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEE
Confidence 9999988887 478999999999999999999999999999999999999999999999999999999999887788899
Q ss_pred EEEEeCCCC-CCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHH
Q 008895 485 AFVVRQPHS-SLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELR 537 (549)
Q Consensus 485 ~~v~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~ 537 (549)
++++++++. ..+.+++.++++++|+++++|..|+++++||+|++||++|++|+
T Consensus 488 ~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 488 AFVKLRPGAKPFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred EEEEECCCCCcCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 999887654 35788999999999999999999999999999999999999875
No 89
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=3.1e-65 Score=549.60 Aligned_cols=493 Identities=24% Similarity=0.281 Sum_probs=385.5
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEEC----------CCC-----------ceecHHHHHHHHHHHHHHhHHhcCCCCCC
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINS----------VTG-----------LRVSFSEFTRRTNSLASYLQNVTRLSKND 96 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~a~~~A~~L~~~~g~~~g~ 96 (549)
.|+.++|.+.++++ |+++|+..- .++ ..+||+||.++++++|++|.+ +|+++||
T Consensus 58 ~t~~~l~~~~~~~~----pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-lG~~~gd 132 (696)
T PLN02387 58 TTLAALFEQSCKKY----SDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA-LGHNKEE 132 (696)
T ss_pred CCHHHHHHHHHHHC----CCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCC
Confidence 58999999999999 999999320 112 238999999999999999998 8999999
Q ss_pred EEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CC-eEEEecCCc
Q 008895 97 TAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSPE 170 (549)
Q Consensus 97 ~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~~ 170 (549)
+|+|+++|+++|++++|||+++|++++|+++.++.+++.++|++++++++|++.+....+... .. .++.++...
T Consensus 133 ~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~ 212 (696)
T PLN02387 133 RVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEG 212 (696)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999998766554432 11 244444211
Q ss_pred -----------------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCC
Q 008895 171 -----------------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVS 233 (549)
Q Consensus 171 -----------------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 233 (549)
+.++....... ........++++++|+|||||||.||||++||+++++.+...........+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~ 291 (696)
T PLN02387 213 VDSDSSLSGSSNWTVSSFSEVEKLGKEN-PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGK 291 (696)
T ss_pred chhhhhhhccCCcEEEEHHHHHHhhccC-CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCC
Confidence 12211111100 111223467899999999999999999999999999888776555434678
Q ss_pred CcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcC--------HHHHHHHHHHhceeeeeecHHHHHHHHhCCCCC---
Q 008895 234 PAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFD--------LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--- 302 (549)
Q Consensus 234 ~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~--------~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~--- 302 (549)
+|++++.+|++|.+++...+.++..|+++....+.. ...++..+++++||+++++|.++..+.+.....
T Consensus 292 ~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~ 371 (696)
T PLN02387 292 NDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDA 371 (696)
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhc
Confidence 899999999999999976666677777766543211 134567899999999999999998876431100
Q ss_pred ----------------------------CC---------------CC-CCceEEEEecCCCCHHHHHHHHHhCCCCcEEc
Q 008895 303 ----------------------------GY---------------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (549)
Q Consensus 303 ----------------------------~~---------------~l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~ 338 (549)
.. .+ +++|.+++||+++++++.+.+...+ ++.+++
T Consensus 372 ~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~ 450 (696)
T PLN02387 372 KGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQ 450 (696)
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeE
Confidence 00 01 5899999999999999988888777 789999
Q ss_pred ccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCC-CcC--CCCCcceEEEecCCcccccCCCccccccccC
Q 008895 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETG-DSL--PPGKEGELSIRGPTIMKGYVGEPEVTSATLL 415 (549)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~-~~~--~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~ 415 (549)
.||+||++..++.... .....+++|+|+|+++++|+|.+++ ... .++..|||+|+||+++.|||++|+.|.+.|.
T Consensus 451 ~YG~TEt~~~~~~~~~--~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~ 528 (696)
T PLN02387 451 GYGLTETCAGATFSEW--DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYK 528 (696)
T ss_pred eechhhcccceeecCc--ccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhc
Confidence 9999999876654322 2335689999999999999994433 322 2345799999999999999999999999884
Q ss_pred --CCC--eeecCceEEEecCCeEEEEcccCCeeee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeC
Q 008895 416 --PDG--WMRTGDLCYIDEDGFLFIVDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQ 490 (549)
Q Consensus 416 --~~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~ 490 (549)
.+| ||+|||+|++|+||+++++||+||+||+ +|++|+|.+||++|.+||.|.+++|++.+. ...++++|++.
T Consensus 529 ~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~~a~vv~~ 605 (696)
T PLN02387 529 VDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPF---HSYCVALVVPS 605 (696)
T ss_pred cccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCC---cceEEEEEEeC
Confidence 345 9999999999999999999999999998 699999999999999999999999997653 34678888875
Q ss_pred CCC--------C---CC----------HHHHHHHH-----HhcCCCCCcccEEEEeCccC------CCCCCcccHHHHHc
Q 008895 491 PHS--------S---LN----------EAEIMEFV-----ARQVSPYKKIRRVAFINAIP------KSAAGKILRMELRK 538 (549)
Q Consensus 491 ~~~--------~---~~----------~~~i~~~l-----~~~l~~~~~p~~i~~v~~lP------~t~~GKv~r~~l~~ 538 (549)
... . .+ .+++.+.+ +.+|..+++|+.|.++.+-. +|++.|+.|+.+++
T Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~R~~i~~ 685 (696)
T PLN02387 606 QQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKREQIRK 685 (696)
T ss_pred HHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhhhHHHHH
Confidence 321 0 01 12233333 33699999999998886533 58888999999999
Q ss_pred ccCc
Q 008895 539 VAVP 542 (549)
Q Consensus 539 ~~~~ 542 (549)
.|.+
T Consensus 686 ~y~~ 689 (696)
T PLN02387 686 KFKD 689 (696)
T ss_pred HHHH
Confidence 8754
No 90
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=6.3e-65 Score=632.45 Aligned_cols=485 Identities=22% Similarity=0.336 Sum_probs=422.5
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.++|.++++++ |+++|+++. ++++||+||.++++++|++|++ .|+++|++|+++++++.++++++||+++
T Consensus 1131 ~~l~~~~~~~a~~~----p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~s~~~iv~~lailk 1203 (4334)
T PRK05691 1131 AWLPELLNEQARQT----PERIALVWD--GGSLDYAELHAQANRLAHYLRD-KGVGPDVCVAIAAERSPQLLVGLLAILK 1203 (4334)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEEC--CceEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 57999999999999 999999987 7899999999999999999999 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-CCeEEEecCCchhhhhcccCCCccccccccCCCCEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (549)
+|++++|++|.++.+++.+++++++++++|++......+... ....+.++....... . . ........++++++
T Consensus 1204 aG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-~~~~~~~~~~~~a~ 1277 (4334)
T PRK05691 1204 AGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALDSLHLDSW----P-S-QAPGLHLHGDNLAY 1277 (4334)
T ss_pred hCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeecccccccc----C-C-CCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998766554432 122232222111110 0 0 11112345789999
Q ss_pred EEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEec---CcCHHHH
Q 008895 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (549)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~---~~~~~~~ 273 (549)
++|||||||.||||.++|+++.+.+.+....+ ...++++++...|+.|..+++.++.++..|+++++.+ ..++..+
T Consensus 1278 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l 1356 (4334)
T PRK05691 1278 VIYTSGSTGQPKGVGNTHAALAERLQWMQATY-ALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRI 1356 (4334)
T ss_pred EEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-CCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHH
Confidence 99999999999999999999999888777766 5778899999999999999999999999999999975 3688999
Q ss_pred HHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceeccc
Q 008895 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (549)
Q Consensus 274 ~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 353 (549)
++.++++++|+++++|+++..+..... ...++++|.+++|||++++++.++|.+.++++.+++.||+||++..+....
T Consensus 1357 ~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 1434 (4334)
T PRK05691 1357 AELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQ 1434 (4334)
T ss_pred HHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeee
Confidence 999999999999999999999986542 235789999999999999999999999998899999999999987665432
Q ss_pred CcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC-------CCeeecCceE
Q 008895 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTGDLC 426 (549)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-------~~~~~TGD~~ 426 (549)
.........++|+|++++.++|+| +.+++++.|..|||+|+|+++++||+++|+.|.+.|.. .+||+|||+|
T Consensus 1435 ~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~ 1513 (4334)
T PRK05691 1435 CQAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRA 1513 (4334)
T ss_pred cccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceE
Confidence 222233456899999999999999 67899999999999999999999999999999998854 2499999999
Q ss_pred EEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHh
Q 008895 427 YIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVAR 506 (549)
Q Consensus 427 ~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~ 506 (549)
++++||.++++||+|++||++|++|+|.|||++|.++|+|.+++|++..+. .++.++++++.......+.+++++++++
T Consensus 1514 ~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~-~~~~lva~~~~~~~~~~~~~~l~~~l~~ 1592 (4334)
T PRK05691 1514 RWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVREGA-AGAQLVGYYTGEAGQEAEAERLKAALAA 1592 (4334)
T ss_pred EECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEeeCC-CCCEEEEEEEeCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999976554 4578899998876666778899999999
Q ss_pred cCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 507 QVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 507 ~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
+|+.|++|..++++++||+|++|||||++|++..
T Consensus 1593 ~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~~ 1626 (4334)
T PRK05691 1593 ELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEPV 1626 (4334)
T ss_pred hCccccCCcEEEEccccCCCCCCCcChhhcCccc
Confidence 9999999999999999999999999999998754
No 91
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=6.2e-65 Score=521.61 Aligned_cols=429 Identities=20% Similarity=0.256 Sum_probs=360.4
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCC-CCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~-~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (549)
.-+.|+||.++++++|++|++ .|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~-~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~ 96 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQ-LATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQI 96 (452)
T ss_pred eecChHHHHHHHHHHHHHHHH-hcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEE
Confidence 457899999999999999999 887 579999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhc
Q 008895 147 FATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA 226 (549)
Q Consensus 147 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~ 226 (549)
+++....... .. . .. .......+++.++++|||||||.||+|+++|+++.++......
T Consensus 97 i~~~~~~~~~---------~~-----~----~~----~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~ 154 (452)
T PRK07445 97 WGLDQLKLSH---------PP-----P----LP----SQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQR 154 (452)
T ss_pred EecCcccccc---------CC-----C----CC----ccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHH
Confidence 9876542210 00 0 00 0011235678999999999999999999999999887776665
Q ss_pred cCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCC
Q 008895 227 SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDL 306 (549)
Q Consensus 227 ~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l 306 (549)
.+ ...+ ++.++.+|++|.+|+...+.++..|+++++.+............++++++++++|+++..+++.. ...+
T Consensus 155 ~~-~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l 229 (452)
T PRK07445 155 YF-QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWL 229 (452)
T ss_pred Hh-cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhh
Confidence 55 2333 45788999999999988889999999998876422222234445788999999999999988632 2347
Q ss_pred CCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCC
Q 008895 307 SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPP 386 (549)
Q Consensus 307 ~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~ 386 (549)
+++|.+++||+++++++.+++.+. ++.+++.||+||++..++...........+++|+|+|+++++|+ .
T Consensus 230 ~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---------~ 298 (452)
T PRK07445 230 AQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---------A 298 (452)
T ss_pred hcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---------C
Confidence 899999999999999999988763 78999999999997654432221112245689999999999997 4
Q ss_pred CCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCc
Q 008895 387 GKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREV 466 (549)
Q Consensus 387 g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v 466 (549)
|+.|||+|+|+.++.||++++. ..++||+|||+|++|+||++++.||.||+||.+|++|+|.+||++|.+||+|
T Consensus 299 g~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V 372 (452)
T PRK07445 299 NQTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLV 372 (452)
T ss_pred CCcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCc
Confidence 5689999999999999998542 2478999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 467 ADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 467 ~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
.+|+|++.+++..++.++++++..+. ..+.++++++++++|+.|++|+.++++++||+|++||++|++|++++.+
T Consensus 373 ~~a~V~g~~~~~~g~~~~a~vv~~~~-~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 447 (452)
T PRK07445 373 QDVCVLGLPDPHWGEVVTAIYVPKDP-SISLEELKTAIKDQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQ 447 (452)
T ss_pred ceEEEEeccCcCCCcEEEEEEEeCCC-CCCHHHHHHHHHHhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHH
Confidence 99999999998888999999988654 4578899999999999999999999999999999999999999998754
No 92
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3.3e-65 Score=634.94 Aligned_cols=484 Identities=20% Similarity=0.270 Sum_probs=416.0
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.+++++|.++++++ |+++|++++ +..+||+||.++++++|++|.+ .|+++|++|+|++++++++++++||+++
T Consensus 3720 ~~~~~~~~~~~~~~----p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~-~gv~~~~~V~v~~~~s~~~~v~~lavlk 3792 (4334)
T PRK05691 3720 QSYVRLFEAQVAAH----PQRIAASCL--DQQWSYAELNRAANRLGHALRA-AGVGVDQPVALLAERGLDLLGMIVGSFK 3792 (4334)
T ss_pred cCHHHHHHHHHHhC----CCceEEEcC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999998 7899999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-------CCe-EEEecCCchhhhhcccCCCcccccccc
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KHR-TILIDSPEFDSMTMSWNSKHELDRAKV 189 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (549)
+|++++|+||.++.+++.+++++++++++|++.......... ... ++..+. ...... .........
T Consensus 3793 aG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~ 3866 (4334)
T PRK05691 3793 AGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE-----VQAGEV-ASHNPGIYS 3866 (4334)
T ss_pred hCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc-----cccccc-cccCCCCCC
Confidence 999999999999999999999999999999998754432211 111 111111 100000 001122235
Q ss_pred CCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC--
Q 008895 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-- 267 (549)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~-- 267 (549)
.+++.||++|||||||.||||+++|+++.+.+......+ ...+.++++...++.+..+++..+.++..|+++++.+.
T Consensus 3867 ~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~ 3945 (4334)
T PRK05691 3867 GPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-ALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAI 3945 (4334)
T ss_pred CCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-CCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccc
Confidence 678999999999999999999999999999998877777 57889999999999999999999999999999998764
Q ss_pred -cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccc
Q 008895 268 -FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTEST 346 (549)
Q Consensus 268 -~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~ 346 (549)
.++..+++.++++++|++.++|+++..++... ...+++||.+++|||++++++.+.|.+.++++++++.||+||++
T Consensus 3946 ~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t 4022 (4334)
T PRK05691 3946 AHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECS 4022 (4334)
T ss_pred cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccce
Confidence 57899999999999999999999999887543 23478999999999999999999999998899999999999998
Q ss_pred cceecccCcCCC--CCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC-------C
Q 008895 347 AGVFRTVGPDEC--RRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------D 417 (549)
Q Consensus 347 ~~~~~~~~~~~~--~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-------~ 417 (549)
..+......... ....++|+|++|++++|+| +.++++|.|..|||+|+|+.+++||+++|+.|.++|.+ +
T Consensus 4023 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~ 4101 (4334)
T PRK05691 4023 DDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGE 4101 (4334)
T ss_pred eEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCc
Confidence 876543322211 2234799999999999999 78999999999999999999999999999999999864 3
Q ss_pred CeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCC--
Q 008895 418 GWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSL-- 495 (549)
Q Consensus 418 ~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~-- 495 (549)
+||+|||+|++++||.++++||+|++||++|++|++.|||++|.++|+|.+++|+... ...++.+++|++.......
T Consensus 4102 ~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~-~~~~~~l~a~~~~~~~~~~~~ 4180 (4334)
T PRK05691 4102 RLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQE-GVNGKHLVGYLVPHQTVLAQG 4180 (4334)
T ss_pred eeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEec-CCCCcEEEEEEeCCcccccch
Confidence 6999999999999999999999999999999999999999999999999999887654 3456788999987654322
Q ss_pred -CHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 496 -NEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 496 -~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
..++++++|+++||.||+|..++.+++||+|++|||||++|++..
T Consensus 4181 ~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~~ 4226 (4334)
T PRK05691 4181 ALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPALD 4226 (4334)
T ss_pred HHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCCc
Confidence 246799999999999999999999999999999999999998864
No 93
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.2e-63 Score=523.25 Aligned_cols=478 Identities=23% Similarity=0.360 Sum_probs=403.8
Q ss_pred ccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCC
Q 008895 48 RATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 48 ~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~ 127 (549)
++.+ |+++|+++. +..+||.||.++++++|++|.+ .|+++|++|+++++|+.+++++++||+++|++++|+++
T Consensus 15 ~~~~----p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~~ 87 (508)
T TIGR02262 15 VEGR----GGKTAFIDD--ISSLSYGELEAQVRRLGAALRR-LGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALNT 87 (508)
T ss_pred hccc----CCceEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeeccC
Confidence 4567 999999987 7899999999999999999998 89999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CC-eEEEecC-----CchhhhhcccCCCccccccccCCCCEEE
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDS-----PEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (549)
.++.+++.++++.+++++++++......+... .. ..+..+. ..+.+....... ........++++++
T Consensus 88 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~ 165 (508)
T TIGR02262 88 LLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATESE--QFKPAATQADDPAF 165 (508)
T ss_pred CCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCCC--ccCCCCCCCCCcEE
Confidence 99999999999999999999998766544321 11 1222221 112222211110 11122345688999
Q ss_pred EEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEec-CcCHHHHH
Q 008895 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMML 274 (549)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~ 274 (549)
++|||||||.||+|.++|+++................+++++..+|++|.+++ ..++.++..|++.++.+ .+++..++
T Consensus 166 i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 245 (508)
T TIGR02262 166 WLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVF 245 (508)
T ss_pred EEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHH
Confidence 99999999999999999999988776532222256788999999999999888 45667788899888865 36899999
Q ss_pred HHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccC
Q 008895 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (549)
Q Consensus 275 ~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~ 354 (549)
+.|+++++|+++++|+++..++...........++|.+++||+++++++.+.|.+.+ ++++++.||+||++..+....
T Consensus 246 ~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~- 323 (508)
T TIGR02262 246 DRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIFLSNL- 323 (508)
T ss_pred HHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCceeecCC-
Confidence 999999999999999999888766543344567899999999999999999999998 789999999999987655422
Q ss_pred cCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeE
Q 008895 355 PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFL 434 (549)
Q Consensus 355 ~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~ 434 (549)
......+++|.|++++.++++| +++.+++.|+.|||+++|++++.||+++++.+...| .++||+|||+++++++|.+
T Consensus 324 -~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~ 400 (508)
T TIGR02262 324 -PGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDKYVRNDDGSY 400 (508)
T ss_pred -ccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccceEEEcCCccE
Confidence 1223457899999999999999 889999999999999999999999999999988877 5799999999999999999
Q ss_pred EEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCC---CCHHHHHHHHHhcCCCC
Q 008895 435 FIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSS---LNEAEIMEFVARQVSPY 511 (549)
Q Consensus 435 ~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~---~~~~~i~~~l~~~l~~~ 511 (549)
++.||.+|+++++|.+|++.+||++|.++++|.++++++.++....+.+.++++..+... ...+++.++++++|+++
T Consensus 401 ~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~ 480 (508)
T TIGR02262 401 TYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDRLAPY 480 (508)
T ss_pred EEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHhcccC
Confidence 999999999999999999999999999999999999999887777788889988765432 34688999999999999
Q ss_pred CcccEEEEeCccCCCCCCcccHHHHHcc
Q 008895 512 KKIRRVAFINAIPKSAAGKILRMELRKV 539 (549)
Q Consensus 512 ~~p~~i~~v~~lP~t~~GKv~r~~l~~~ 539 (549)
+.|..++++++||+|++||++|++|++|
T Consensus 481 ~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 481 KYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred CCCceEEEecCCCCCCCCcEehhhccCC
Confidence 9999999999999999999999999875
No 94
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-63 Score=527.04 Aligned_cols=494 Identities=31% Similarity=0.489 Sum_probs=411.3
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|...++++ |+++|+++. ++.+||.||.++++++|.+|.++.|+++|++|+++++|+.++++++|||++
T Consensus 23 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 96 (560)
T PRK08974 23 QSLVDMFEQAVARY----ADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILR 96 (560)
T ss_pred ccHHHHHHHHHHhC----CCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 47999999999988 999999987 789999999999999999998437999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhc----CCCeEEEecC--Cc---------------------
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHRTILIDS--PE--------------------- 170 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~~~~~~--~~--------------------- 170 (549)
+|++++|++|..+.+.+.++++.++++.+++++...+.+.+ .....+.... ..
T Consensus 97 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (560)
T PRK08974 97 AGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVP 176 (560)
T ss_pred cCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccc
Confidence 99999999999999999999999999999998765443322 1111111100 00
Q ss_pred ---------hhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCC--CCCCCcEEEE
Q 008895 171 ---------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLF 239 (549)
Q Consensus 171 ---------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~ 239 (549)
+.+...... ..........++++++++|||||||.||+|.++|.++..++......+. .....+.++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08974 177 KYHLPDAISFRSALHKGR-RMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVT 255 (560)
T ss_pred cccCCCcccHHHHhhccC-CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEE
Confidence 000000000 0001112245688999999999999999999999999877654433321 1344567888
Q ss_pred ecChhhHHHH-HHHHHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecC
Q 008895 240 TMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAA 317 (549)
Q Consensus 240 ~~pl~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge 317 (549)
.+|++|.+++ ...+.++..|++.++.. ..++..+++.+.++++|+++++|+++..+..........++++|.+++||+
T Consensus 256 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 335 (560)
T PRK08974 256 ALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGM 335 (560)
T ss_pred eCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCc
Confidence 9999999887 44566777888766653 567899999999999999999999999998876555566789999999999
Q ss_pred CCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecC
Q 008895 318 PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP 397 (549)
Q Consensus 318 ~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~ 397 (549)
++++.+.++|++.+ ++.+++.||+||++.++..+... .....+++|.|++++.++|+| +++..++.|+.|||+++|+
T Consensus 336 ~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~ 412 (560)
T PRK08974 336 AVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYD-LDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGP 412 (560)
T ss_pred cCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCC-CcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecC
Confidence 99999999999987 78999999999998776654322 223457899999999999999 5688999999999999999
Q ss_pred CcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCC
Q 008895 398 TIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDE 477 (549)
Q Consensus 398 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~ 477 (549)
.++.||+++++.+...| .+|||+|||+++++++|.+++.||.+|+++++|.+|+|.+||++|.++|+|.+++|++.++.
T Consensus 413 ~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~ 491 (560)
T PRK08974 413 QVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPSE 491 (560)
T ss_pred CcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeecC
Confidence 99999999999988877 68999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 478 EAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 478 ~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
..++.++++++..+ ...+.+++++++.++|+.++.|..+.++++||+|++||++|++|++...++
T Consensus 492 ~~g~~~~~~v~~~~-~~~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 556 (560)
T PRK08974 492 VSGEAVKIFVVKKD-PSLTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAK 556 (560)
T ss_pred CcceEEEEEEECCC-CCCCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhh
Confidence 88888888877554 345678999999999999999999999999999999999999999987654
No 95
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-63 Score=525.18 Aligned_cols=491 Identities=25% Similarity=0.328 Sum_probs=405.8
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
+|+.+++.+.++++ |+++|+.+. ++.+||.||.++++++|+.|.+ .|+++|++|+++++|++++++++|||++
T Consensus 3 ~~l~~~~~~~a~~~----p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~-~g~~~~~~v~v~~~n~~~~~~~~~a~~~ 75 (533)
T PRK07798 3 WNIADLFEAVADAV----PDRVALVCG--DRRLTYAELEERANRLAHYLIA-QGLGPGDHVGIYARNRIEYVEAMLGAFK 75 (533)
T ss_pred ccHHHHHHHHHHhC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 68999999999999 999999997 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CC-eEEEecCC----------chhhhhcccCCC
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSP----------EFDSMTMSWNSK 181 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~----------~~~~~~~~~~~~ 181 (549)
+|++++|+++.++.+++.++++++++++++++......+.+. .. .++.++.. .+.+.......
T Consensus 76 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (533)
T PRK07798 76 ARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSP- 154 (533)
T ss_pred cCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCC-
Confidence 999999999999999999999999999999998765554432 11 23333321 22222221111
Q ss_pred ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC--------------CCCCCCcEEEEecChhhHH
Q 008895 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--------------PKRVSPAVMLFTMPYFHIY 247 (549)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--------------~~~~~~~~~~~~~pl~~~~ 247 (549)
..... ....+.++++|||||||.||+|+++|+++..........+ .....+++++..+|++|.+
T Consensus 155 -~~~~~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 232 (533)
T PRK07798 155 -ERDFG-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGA 232 (533)
T ss_pred -cCCCC-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhh
Confidence 11111 1223457899999999999999999999876554322211 0014568899999999999
Q ss_pred HHHHHHHHhhhccEEEEec--CcCHHHHHHHHHHhceeeeeecHHHHH-HHHhCCC-CCCCCCCCceEEEEecCCCCHHH
Q 008895 248 GLFFCFRAAALMETAVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVV-AMSKGGS-TDGYDLSSLETVACGAAPLGKDT 323 (549)
Q Consensus 248 g~~~~~~~l~~g~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~P~~l~-~l~~~~~-~~~~~l~~lr~v~~~Ge~l~~~~ 323 (549)
+++..+.++..|+++++.+ .+++..+++.++++++|.++++|..+. .+..... .....++++|.+++||+++++++
T Consensus 233 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~ 312 (533)
T PRK07798 233 GQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSV 312 (533)
T ss_pred hHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHH
Confidence 9998999999999999998 789999999999999999999987553 3333322 33456789999999999999999
Q ss_pred HHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCc--ceEEEecCCccc
Q 008895 324 IMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKE--GELSIRGPTIMK 401 (549)
Q Consensus 324 ~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~ 401 (549)
.+++.+.+++..+++.||+||++.+...... ......+. +.+.++..++|+| +++++++.|+. |+++ +++.++.
T Consensus 313 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~g~-~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~~~~ 388 (533)
T PRK07798 313 KEALLELLPNVVLTDSIGSSETGFGGSGTVA-KGAVHTGG-PRFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGHIPL 388 (533)
T ss_pred HHHHHHHcCCCeEEeeecccccccccccCCC-CCCccCCC-CccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecCccc
Confidence 9999999988899999999999765543211 11111111 3778999999999 56778888887 6665 5567999
Q ss_pred ccCCCccccccccCC---CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCC
Q 008895 402 GYVGEPEVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEE 478 (549)
Q Consensus 402 gy~~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~ 478 (549)
||+++++.+...|.. ++||+|||++++|++|++++.||.||+++.+|++|++.+||++|.++|.|.+++|++.++..
T Consensus 389 gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~ 468 (533)
T PRK07798 389 GYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDER 468 (533)
T ss_pred cccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCcc
Confidence 999999988887753 35999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 479 AGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 479 ~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
.++.+.+++++.++...+.++++++++++|+.+++|..++++++||+|++||++|+.|++++.+
T Consensus 469 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 469 WGQEVVAVVQLREGARPDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred cCceEEEEEEECCCCCCCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhcc
Confidence 7888999998887666788999999999999999999999999999999999999999999865
No 96
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-63 Score=554.39 Aligned_cols=485 Identities=17% Similarity=0.183 Sum_probs=387.1
Q ss_pred CCCCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHH
Q 008895 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (549)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la 114 (549)
+..+++.++|.++++++ |+++|+++. ++++||+||.++++++|+.|++ .|+++||+|+|+++|++++++++||
T Consensus 444 ~~~~sl~~ll~~~a~~~----pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~-~Gv~~Gd~VaI~~~n~~e~v~a~lA 516 (994)
T PRK07868 444 HTRISLGRIIAEQARDA----PKGEFLLFD--GRVHTYEAVNRRINNVVRGLIA-VGVRQGDRVGVLMETRPSALVAIAA 516 (994)
T ss_pred CCCccHHHHHHHHHHHC----CCCeEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34589999999999999 999999987 7899999999999999999998 8999999999999999999999999
Q ss_pred HHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCc--------hhhhhccc---CCCcc
Q 008895 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPE--------FDSMTMSW---NSKHE 183 (549)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~ 183 (549)
|+++|++++|++|. .++.++++.++++++|++....+.+......++.++... ........ .....
T Consensus 517 ~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (994)
T PRK07868 517 LSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVE 593 (994)
T ss_pred HHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccccCCcchhhhhhhhcCccccc
Confidence 99999999999985 578999999999999999877766554444455443210 00000000 00000
Q ss_pred cc----ccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHH-HHhhh
Q 008895 184 LD----RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCF-RAAAL 258 (549)
Q Consensus 184 ~~----~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~-~~l~~ 258 (549)
.. .....++++++|+|| ||||.||++.++|.+...........+ ....+|++++.+|++|.+++...+ .++..
T Consensus 594 ~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~g 671 (994)
T PRK07868 594 LPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-ALDRRDTVYCLTPLHHESGLLVSLGGAVVG 671 (994)
T ss_pred CCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-CCCCCCeEEEecChHHHhHHHHHHHHHhcc
Confidence 00 011235789999998 577777777778776654443333333 467789999999999999996554 44555
Q ss_pred ccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEc
Q 008895 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (549)
Q Consensus 259 g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~ 338 (549)
|+++++.+.++++.+++.|+++++|+++++|+++..+++.......+++++|.++ |+.+++++.+++.+.++++.+++
T Consensus 672 G~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~ 749 (994)
T PRK07868 672 GSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVE 749 (994)
T ss_pred ceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheee
Confidence 5556666678999999999999999999999999999886544445677899766 44599999999999997789999
Q ss_pred ccCccccccceecccCcCCCCCCCccccccCCc-EEEEE--cC--------CCC--CcCCCCCcceEEEecCCcccccCC
Q 008895 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGL-EAKIV--DP--------ETG--DSLPPGKEGELSIRGPTIMKGYVG 405 (549)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~--d~--------~~~--~~~~~g~~Gel~v~g~~~~~gy~~ 405 (549)
.||+||++...... .....+++|+|++|+ +++|. |+ +++ +.++.|+.|||+++++.. ++
T Consensus 750 ~YG~TE~~~~~~~~----~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~~ 821 (994)
T PRK07868 750 FFATTDGQAVLANV----SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----ID 821 (994)
T ss_pred eeeccccccccccc----CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC----CC
Confidence 99999987543321 123567999999997 66653 21 344 567889999999999853 33
Q ss_pred Ccccc--ccccC-CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCce
Q 008895 406 EPEVT--SATLL-PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQM 482 (549)
Q Consensus 406 ~~~~~--~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~ 482 (549)
|+.+ ...|. .+|||+|||+|++|+||+++++||+||+||++|.+|+|.|||++|.+||+|.+|+|++++++. ++.
T Consensus 822 -p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~ 899 (994)
T PRK07868 822 -PTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQL 899 (994)
T ss_pred -hhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-Cce
Confidence 3322 22242 379999999999999999999999999999999999999999999999999999999998865 578
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCC
Q 008895 483 PMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSG 544 (549)
Q Consensus 483 ~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~ 544 (549)
++++|+++++...+.++|++++++ ++.|++|+.|+++++||+|++||++|++|++..+...
T Consensus 900 ~~a~Vv~~~~~~~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~lp~p 960 (994)
T PRK07868 900 AVAAVTLRPGAAITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGIPKP 960 (994)
T ss_pred EEEEEEeCCCCcCCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCCCCC
Confidence 899999887777888999999986 9999999999999999999999999999998877643
No 97
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-64 Score=545.16 Aligned_cols=490 Identities=22% Similarity=0.262 Sum_probs=380.1
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECC-------------------------CCceecHHHHHHHHHHHHHHhHHhcCC
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------------------------TGLRVSFSEFTRRTNSLASYLQNVTRL 92 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~a~~~A~~L~~~~g~ 92 (549)
.|+.+.|.++++++ |+++|+.... ..+.+||+||.++++++|++|.+ +|+
T Consensus 69 ~t~~~~~~~~~~~~----p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~-~Gv 143 (700)
T PTZ00216 69 PNFLQRLERICKER----GDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE-LGL 143 (700)
T ss_pred CCHHHHHHHHHHhC----CCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH-hCC
Confidence 58999999999999 9999997621 24789999999999999999998 999
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhc------C-CCeEEE
Q 008895 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------L-KHRTIL 165 (549)
Q Consensus 93 ~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~------~-~~~~~~ 165 (549)
++||+|+|+++|+++++++++||+++|++++|+++.++.+++.++++++++++++++......+.. . ...++.
T Consensus 144 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~ 223 (700)
T PTZ00216 144 TKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIY 223 (700)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEE
Confidence 999999999999999999999999999999999999999999999999999999998765544321 1 123444
Q ss_pred ecCC------------chhhhhccc--CCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC---
Q 008895 166 IDSP------------EFDSMTMSW--NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--- 228 (549)
Q Consensus 166 ~~~~------------~~~~~~~~~--~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--- 228 (549)
++.. .|.++.... ............++++++++|||||||.||||+++|+++++.+......+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~ 303 (700)
T PTZ00216 224 LDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDL 303 (700)
T ss_pred ECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccc
Confidence 4321 123322211 00001112234678999999999999999999999999998877655433
Q ss_pred -CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHH-------HHHHhceeeeeecHHHHHHHHhCCC
Q 008895 229 -PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLK-------AVEEFRVTHAAVTPPIVVAMSKGGS 300 (549)
Q Consensus 229 -~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~-------~l~~~~~t~l~~~P~~l~~l~~~~~ 300 (549)
....+++++++.+|++|.+++......+..|+.+.+. ++..+.+ .+++++||++.++|.++..+.+...
T Consensus 304 ~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~ 380 (700)
T PTZ00216 304 IGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVE 380 (700)
T ss_pred cCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHH
Confidence 1235688999999999999886555667778776653 3455544 6889999999999999887754210
Q ss_pred C-------------------------CCCC---------------C-CCceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 301 T-------------------------DGYD---------------L-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 301 ~-------------------------~~~~---------------l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
. .+.. + +++|.+++||+++++++.++++..+ + .+++.
T Consensus 381 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~ 458 (700)
T PTZ00216 381 AKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQG 458 (700)
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhc
Confidence 0 0000 1 5799999999999999998888776 5 89999
Q ss_pred cCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCC-CcCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 008895 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~-~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~ 418 (549)
||+||++..+.... ......+++|+|++|++++|+|+++. ...+++..|||+|+|++++.|||++|+.|.+.|..+|
T Consensus 459 YG~TEt~~~~~~~~--~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dG 536 (700)
T PTZ00216 459 WGLTETVCCGGIQR--TGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDG 536 (700)
T ss_pred cCcccccccccccC--CCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccC
Confidence 99999976654422 22345689999999999999995432 2345567899999999999999999999999998899
Q ss_pred eeecCceEEEecCCeEEEEcccCCeee-eCcEeeChHHHHHHHHcCCCcceE--EEEeecCCCCCceeEEEEEeCCCC--
Q 008895 419 WMRTGDLCYIDEDGFLFIVDRLKDLIK-YKGYQVAPAELEHLLLSHREVADA--AVIPYPDEEAGQMPMAFVVRQPHS-- 493 (549)
Q Consensus 419 ~~~TGD~~~~~~~g~~~~~GR~~d~i~-~~G~~v~~~~IE~~l~~~~~v~~~--~vv~~~~~~~~~~~~~~v~~~~~~-- 493 (549)
||+|||+|++|+||+++++||+||+|| .+|++|+|.+||++|.++|.|.++ +|++.++ ...++++|++....
T Consensus 537 w~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~---~~~l~a~vv~~~~~~~ 613 (700)
T PTZ00216 537 WFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA---RSYICALVLTDEAKAM 613 (700)
T ss_pred CeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC---CceEEEEEecCHHHHH
Confidence 999999999999999999999999999 699999999999999999999973 4443322 35778888864210
Q ss_pred ------C--CC------H----HHHHHHH-----HhcCCCCCcccEEEEeC------ccCCCCCCcccHHHHHcccCc
Q 008895 494 ------S--LN------E----AEIMEFV-----ARQVSPYKKIRRVAFIN------AIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 494 ------~--~~------~----~~i~~~l-----~~~l~~~~~p~~i~~v~------~lP~t~~GKv~r~~l~~~~~~ 542 (549)
. .+ . +.+.+.+ +..+..+.+++.|.++. .=-+|+++|++|+++++.|.+
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~ 691 (700)
T PTZ00216 614 AFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERYAD 691 (700)
T ss_pred HHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccchHHHHHHHHH
Confidence 0 01 0 1222322 23688899999888873 234699999999999988753
No 98
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.5e-63 Score=522.79 Aligned_cols=491 Identities=26% Similarity=0.390 Sum_probs=401.6
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
++..+.|.+.++.+ |+++|+... +..+||.||.++++++|.+|.+ .|+++||+|+++++|++++++++|||++
T Consensus 18 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~~~ 90 (545)
T PRK08162 18 LTPLSFLERAAEVY----PDRPAVIHG--DRRRTWAETYARCRRLASALAR-RGIGRGDTVAVLLPNIPAMVEAHFGVPM 90 (545)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 68889999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhc----CC-CeEEEecC--C-----------chhhhhcccC
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LK-HRTILIDS--P-----------EFDSMTMSWN 179 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~-~~~~~~~~--~-----------~~~~~~~~~~ 179 (549)
+|++++|+++..+.+++..+++.++++.++++......+.+ .. ...+.++. . .+..+.....
T Consensus 91 ~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (545)
T PRK08162 91 AGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGD 170 (545)
T ss_pred hCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCC
Confidence 99999999999999999999999999999999877655432 11 11222221 1 1222211110
Q ss_pred CCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhc
Q 008895 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALM 259 (549)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g 259 (549)
.. ..........+.++++|||||||.||+|+++|+++..+........ ....++++++.+|++|.+++...+.....+
T Consensus 171 ~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~ 248 (545)
T PRK08162 171 PD-FAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-GMPKHPVYLWTLPMFHCNGWCFPWTVAARA 248 (545)
T ss_pred cc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeeEeccCcHhhhhHHHHHHHHHHc
Confidence 00 0011112345789999999999999999999998866655444444 356778999999999999985555555567
Q ss_pred cEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
+..+....+++..+++.|+++++|++.++|+++..|++........+.+.+.++++|+++++++.+.+.+. ++.+++.
T Consensus 249 g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 326 (545)
T PRK08162 249 GTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHV 326 (545)
T ss_pred cEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeec
Confidence 77777777899999999999999999999999999988654433445667778899999999999998875 7899999
Q ss_pred cCccccccceecccCcCC---------CCCCCccccccC-CcEEEEEcCCCCCcCCC-C-CcceEEEecCCcccccCCCc
Q 008895 340 YGLTESTAGVFRTVGPDE---------CRRWGSTGRLSA-GLEAKIVDPETGDSLPP-G-KEGELSIRGPTIMKGYVGEP 407 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~-~~~~~i~d~~~~~~~~~-g-~~Gel~v~g~~~~~gy~~~~ 407 (549)
||+||++..+..+..... ....++.|.+.+ +..++|+|++++.+++. | +.|||+|+|+.++.||++++
T Consensus 327 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~ 406 (545)
T PRK08162 327 YGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNP 406 (545)
T ss_pred ccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCCh
Confidence 999998654443221110 011234566654 34578889778888876 3 46999999999999999999
Q ss_pred cccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEE
Q 008895 408 EVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFV 487 (549)
Q Consensus 408 ~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v 487 (549)
+.+...| .+|||+|||+|++|++|++++.||.+|++|++|++|+|.+||+.|.++|+|.+++|++.++...++.+++++
T Consensus 407 ~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v 485 (545)
T PRK08162 407 KATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFV 485 (545)
T ss_pred hhhHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEE
Confidence 9998888 579999999999999999999999999999999999999999999999999999999998877788999999
Q ss_pred EeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccC
Q 008895 488 VRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 488 ~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~ 541 (549)
++.++...+.++++++++++|+++++|..+++ ++||+|++||++|+.|++++.
T Consensus 486 ~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~ 538 (545)
T PRK08162 486 ELKDGASATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAK 538 (545)
T ss_pred EeCCCCCCCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHh
Confidence 98876667889999999999999999998875 689999999999999998754
No 99
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-63 Score=533.81 Aligned_cols=511 Identities=22% Similarity=0.255 Sum_probs=390.7
Q ss_pred CceeccCCCCCCCCCC-CCCCCHHHHHhhcccCCCCCCCCCcEEEEC-----CCC--ceecHHHHHHHHHHHHHHhHHhc
Q 008895 19 TKTFHSLRPPIDLPPE-DAPISAVDYVSSLRATLPWRDDDTVALINS-----VTG--LRVSFSEFTRRTNSLASYLQNVT 90 (549)
Q Consensus 19 ~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~-----~~~--~~~Ty~el~~~a~~~A~~L~~~~ 90 (549)
..+|++...+-.++.. ..-.|+.++|.+.++++ |+++|+... ..+ ..+||+||.++++++|++|.+ .
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~----p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~ 96 (660)
T PLN02430 22 GPVYRNLLSKKGFPPIDSDITTAWDIFSKSVEKY----PDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-S 96 (660)
T ss_pred CCccccccccccccCCCCCCCCHHHHHHHHHHhC----CCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-c
Confidence 4556654432222111 12258999999999999 999998632 111 347999999999999999999 8
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHH-HHhc----C-CCe-E
Q 008895 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-KLAK----L-KHR-T 163 (549)
Q Consensus 91 g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~----~-~~~-~ 163 (549)
|+++||+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++..... .+.. . ... +
T Consensus 97 Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~i 176 (660)
T PLN02430 97 GAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAI 176 (660)
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEE
Confidence 9999999999999999999999999999999999999999999999999999999999875332 2211 0 122 3
Q ss_pred EEecCC----------------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhcc
Q 008895 164 ILIDSP----------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS 227 (549)
Q Consensus 164 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 227 (549)
+.++.. .++++....... ........++++++++|||||||.||||++||+++.+.+......
T Consensus 177 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~ 255 (660)
T PLN02430 177 VSFTSVTEEESDKASQIGVKTYSWIDFLHMGKEN-PSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLF 255 (660)
T ss_pred EEECCCChHHhhhhhcCCcEEEEHHHHHHhhccC-CCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhh
Confidence 333321 122222111100 111122357899999999999999999999999998877654322
Q ss_pred ---C-CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC---
Q 008895 228 ---S-PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--- 300 (549)
Q Consensus 228 ---~-~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--- 300 (549)
+ ......|++++.+|++|.++....+.++..|+++.+... ++..+++.|.+.+||++.++|.++..+.+...
T Consensus 256 ~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~ 334 (660)
T PLN02430 256 MEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKAL 334 (660)
T ss_pred ccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHH
Confidence 1 135678999999999999998666677888998877653 77899999999999999999999887754210
Q ss_pred ----------------------------CCCCC-------------C-CCceEEEEecCCCCHHHHHHHHHhCCCCcEEc
Q 008895 301 ----------------------------TDGYD-------------L-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (549)
Q Consensus 301 ----------------------------~~~~~-------------l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~ 338 (549)
..... + +++|.+++||+++++++.+.++ .++++.+++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~ 413 (660)
T PLN02430 335 QELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQ 413 (660)
T ss_pred hccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeee
Confidence 00000 1 5899999999999999876555 444578999
Q ss_pred ccCccccccceecccCcCCCCCCCccccccCCcEEEEEc-CCCC-CcCCCCCcceEEEecCCcccccCCCccccccccCC
Q 008895 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVD-PETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP 416 (549)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~ 416 (549)
.||+||+++.++.... ......+++|.|.+++++++.| ++.+ .+++.+..|||+|+|++++.||+++|+.|...| .
T Consensus 414 ~YG~TE~~~~~~~~~~-~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~ 491 (660)
T PLN02430 414 GYGLTETLGPTTLGFP-DEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-K 491 (660)
T ss_pred ecchhhhhhceEeecc-ccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-h
Confidence 9999999876654322 2223468999999999999987 3333 456666789999999999999999999999988 6
Q ss_pred CCeeecCceEEEecCCeEEEEcccCCeeee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC--
Q 008895 417 DGWMRTGDLCYIDEDGFLFIVDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS-- 493 (549)
Q Consensus 417 ~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~-- 493 (549)
+|||+|||+|++|++|++++.||+||+||. +|++|+|.+||++|.++|.|.+++|++.. .++.++++|++.+..
T Consensus 492 dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~ 568 (660)
T PLN02430 492 DGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTN 568 (660)
T ss_pred ccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHH
Confidence 899999999999999999999999999997 79999999999999999999999999732 356889999875421
Q ss_pred --------CCC----------HHHHHHHH-----HhcCCCCCcccEEEEeC-cc-----CCCCCCcccHHHHHcccCc
Q 008895 494 --------SLN----------EAEIMEFV-----ARQVSPYKKIRRVAFIN-AI-----PKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 494 --------~~~----------~~~i~~~l-----~~~l~~~~~p~~i~~v~-~l-----P~t~~GKv~r~~l~~~~~~ 542 (549)
..+ .+.+.+.+ +++|+.+.+++.|.+.+ .+ .+|+++|++|+.+.+.|.+
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02430 569 KWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQV 646 (660)
T ss_pred HHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHH
Confidence 001 11222222 23599999999888874 33 4899999999999887743
No 100
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-63 Score=518.62 Aligned_cols=482 Identities=27% Similarity=0.359 Sum_probs=399.6
Q ss_pred hcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccC
Q 008895 46 SLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA 125 (549)
Q Consensus 46 ~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l 125 (549)
..++++ |+++|+++...++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++||+++|++++++
T Consensus 5 ~~a~~~----p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~-~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 5 IHAQTT----PDKPAVIMASTGEVVTYRELDERSNRLAHLFRS-LGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hhHhhC----CCceEEEecCCCCEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 445666 999999875557899999999999999999998 899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CC-eEEEecCC----c---hhhhhcccCCCccccccccCCC
Q 008895 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSP----E---FDSMTMSWNSKHELDRAKVCQS 192 (549)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~ 192 (549)
++.++.+.+.++++.++++.++++.......... .. ..+.++.. . +.+.... .+........
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 154 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG-----LPATPIADES 154 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcC-----CCCCCCCCcc
Confidence 9999999999999999999999998765543211 11 12222211 0 1111110 0011112334
Q ss_pred CEEEEEccCCCCCccchhhh--cHHHHHHHH---HHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC
Q 008895 193 DVAAIMYSSGTTGRVKGVML--THRNLTAAV---ASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (549)
Q Consensus 193 ~~a~i~~TSGtTG~pK~v~~--t~~~l~~~~---~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~ 267 (549)
+.++++|||||||.||+|.+ +|.++.... ......+ ....+++++..+|++|.+++...+.++..|+++++.+.
T Consensus 155 ~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~~ 233 (511)
T PRK13391 155 LGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-GFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVMEH 233 (511)
T ss_pred cccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-CCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECCC
Confidence 57899999999999999995 465543222 2222223 35678899999999999998777889999999999988
Q ss_pred cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCcccc
Q 008895 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (549)
Q Consensus 268 ~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~ 345 (549)
+++..+++.++++++|++.++|+++..+.+.... ...+++++|.+++||+++++++.+.+++.+ +..+++.||+||+
T Consensus 234 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~ 312 (511)
T PRK13391 234 FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEG 312 (511)
T ss_pred CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccc
Confidence 9999999999999999999999999888765432 233578999999999999999999999988 6789999999999
Q ss_pred ccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCC-CeeecCc
Q 008895 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD-GWMRTGD 424 (549)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~-~~~~TGD 424 (549)
+.+.... ........+++|.|+++ .++++| +++++++.|+.|||+++|+ ++.||+++++.+...+..+ +||+|||
T Consensus 313 ~~~~~~~-~~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD 388 (511)
T PRK13391 313 LGFTACD-SEEWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGD 388 (511)
T ss_pred cceEEec-CccccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCC
Confidence 8765432 22222345789999999 689999 6788999999999999999 8889999999988887665 9999999
Q ss_pred eEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCC---CCHHHHH
Q 008895 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSS---LNEAEIM 501 (549)
Q Consensus 425 ~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~---~~~~~i~ 501 (549)
+|+++++|.+++.||.+|++|++|++|++.+||++|.+||.|.+++|++.++...++.++++++..+... ...+++.
T Consensus 389 ~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 468 (511)
T PRK13391 389 IGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELI 468 (511)
T ss_pred EEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999998888888999988765432 2347899
Q ss_pred HHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 502 EFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 502 ~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
++++++|+.++.|..|.+++++|+|++||++|+.|++.+...
T Consensus 469 ~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~~ 510 (511)
T PRK13391 469 AFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWGN 510 (511)
T ss_pred HHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhcc
Confidence 999999999999999999999999999999999999988764
No 101
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-63 Score=519.36 Aligned_cols=469 Identities=30% Similarity=0.421 Sum_probs=396.0
Q ss_pred CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 008895 66 TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (549)
Q Consensus 66 ~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (549)
.++.+||.||.++++++|++|.+ .|+++|++|+++++|+.+++++++||+++|++++|+++.++.+++.++++..++++
T Consensus 8 ~~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 8 SGEVVTYGELEARSNRLAHGLRA-LGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred CCcEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 38999999999999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCccHHHHhcC------CCeEEEecCC------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhc
Q 008895 146 AFATSSVVHKLAKL------KHRTILIDSP------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLT 213 (549)
Q Consensus 146 ii~~~~~~~~~~~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t 213 (549)
++++......+... ....+.+... .+++..... ........++.++++|||||||.||+|.++
T Consensus 87 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~ 161 (502)
T PRK08276 87 LIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQ-----PDTPIADETAGADMLYSSGTTGRPKGIKRP 161 (502)
T ss_pred EEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcC-----CCCCCCCCCcceEEEECCCCCCCCceEEEc
Confidence 99988766554321 2222222211 122221111 111123446789999999999999999988
Q ss_pred HHHHHHHH------HHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeee
Q 008895 214 HRNLTAAV------ASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAV 287 (549)
Q Consensus 214 ~~~l~~~~------~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 287 (549)
|.++.... ....... ....++++++.+|++|.+++...+.++..|+++++.+.+++..+++.++++++|++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 240 (502)
T PRK08276 162 LPGLDPDEAPGMMLALLGFGM-YGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQL 240 (502)
T ss_pred cCCcchhhhhHHhhhhhhhcc-cCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEe
Confidence 77654322 1111122 1246788999999999999877778999999999988899999999999999999999
Q ss_pred cHHHHHHHHhCCCC--CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccc
Q 008895 288 TPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTG 365 (549)
Q Consensus 288 ~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G 365 (549)
+|+++..+++.... ...+++++|.+++||++++.++++++.+.+ +..+++.||+||++.+++... .......+++|
T Consensus 241 ~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~-~~~~~~~~~~G 318 (502)
T PRK08276 241 VPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS-EDWLAHPGSVG 318 (502)
T ss_pred hHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC-ccccccCCCcc
Confidence 99999999876532 334578999999999999999999999988 678999999999988665432 22234557899
Q ss_pred cccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeee
Q 008895 366 RLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIK 445 (549)
Q Consensus 366 ~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~ 445 (549)
.|+ +..++++| +++.+++.|+.|||+++|+.++.||+++++.+...+.+++||+|||+|+++++|.+++.||.||++|
T Consensus 319 ~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~ 396 (502)
T PRK08276 319 KAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMII 396 (502)
T ss_pred eec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEE
Confidence 999 88999999 6688999999999999999999999999999999988779999999999999999999999999999
Q ss_pred eCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCcccEEEEeCc
Q 008895 446 YKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNE---AEIMEFVARQVSPYKKIRRVAFINA 522 (549)
Q Consensus 446 ~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~l~~~l~~~~~p~~i~~v~~ 522 (549)
.+|.+|++.+||.+|.++|+|.+++|++..+...++.++++++.+++...+. +++.+.++++|+.++.|..++++++
T Consensus 397 ~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~ 476 (502)
T PRK08276 397 SGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGRLAHYKCPRSIDFEDE 476 (502)
T ss_pred eCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhhccCCCCCcEEEEecC
Confidence 9999999999999999999999999999999888899999999876544333 4899999999999999999999999
Q ss_pred cCCCCCCcccHHHHHcccCcCCC
Q 008895 523 IPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 523 lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
||+|++||++|++|++.+.++..
T Consensus 477 lP~t~~GKi~r~~L~~~~~~~~~ 499 (502)
T PRK08276 477 LPRTPTGKLYKRRLRDRYWEGRQ 499 (502)
T ss_pred CCCCcccchhHHHHHHHHHhhhh
Confidence 99999999999999999877654
No 102
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-62 Score=516.39 Aligned_cols=474 Identities=28% Similarity=0.399 Sum_probs=397.2
Q ss_pred cEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHH
Q 008895 59 VALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQI 138 (549)
Q Consensus 59 ~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l 138 (549)
.|+++. ++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++||+++|+++++++|.++.+++.+++
T Consensus 3 ~~~~~~--~~~~Ty~el~~~~~~la~~l~~-~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 79 (509)
T PRK12406 3 ATIISG--DRRRSFDELAQRAARAAGGLAA-LGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYIL 79 (509)
T ss_pred eEEEEC--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHH
Confidence 356665 7899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hhcCCeEEEEcCccHHHHhcC---CCeEEEecCC---------------------chhhhhcccCCCccccccccCCCCE
Q 008895 139 QLSNPVIAFATSSVVHKLAKL---KHRTILIDSP---------------------EFDSMTMSWNSKHELDRAKVCQSDV 194 (549)
Q Consensus 139 ~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (549)
+.+++++++++......+.+. ....+..+.. .+++.... .........+++
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 154 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQ-----QEPYDGPPVPQP 154 (509)
T ss_pred hccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcc-----cCccCCCCCCCc
Confidence 999999999988766544321 1122211111 01111000 001122346789
Q ss_pred EEEEccCCCCCccchhhhcHHHH---HHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHH
Q 008895 195 AAIMYSSGTTGRVKGVMLTHRNL---TAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLK 271 (549)
Q Consensus 195 a~i~~TSGtTG~pK~v~~t~~~l---~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~ 271 (549)
++++|||||||.||+|.++|... ..........+ +...+++++..+|++|..+....+.++..|+++++.+.+++.
T Consensus 155 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (509)
T PRK12406 155 QSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIY-GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPE 233 (509)
T ss_pred eEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhc-CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHH
Confidence 99999999999999999866543 33333333333 457788999999999988876667778889999988888999
Q ss_pred HHHHHHHHhceeeeeecHHHHHHHHhCCC--CCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccce
Q 008895 272 MMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGV 349 (549)
Q Consensus 272 ~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~ 349 (549)
.+++.++++++|.++++|+++..+++... ....+++++|.+++||+++++++++++.+.+ ++.+++.||+||++.++
T Consensus 234 ~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 312 (509)
T PRK12406 234 ELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVT 312 (509)
T ss_pred HHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceE
Confidence 99999999999999999999999887543 2334578999999999999999999999988 68899999999999866
Q ss_pred ecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCccc-ccCCCccccccccCCCCeeecCceEEE
Q 008895 350 FRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMK-GYVGEPEVTSATLLPDGWMRTGDLCYI 428 (549)
Q Consensus 350 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~-gy~~~~~~~~~~~~~~~~~~TGD~~~~ 428 (549)
+... .......+++|.|++++.++++| +++++++.|+.|||+++|++++. ||+++++.+...+ .++||+|||+|++
T Consensus 313 ~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~ 389 (509)
T PRK12406 313 FATS-EDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDVGYL 389 (509)
T ss_pred ecCc-ccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccEEEE
Confidence 5432 22223457899999999999999 66889999999999999998875 9999988877655 6899999999999
Q ss_pred ecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcC
Q 008895 429 DEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQV 508 (549)
Q Consensus 429 ~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l 508 (549)
+++|.+++.||.||++|++|.+|++.+||++|.++++|.++++++.++...++.++++++..+....+.+++++++++.+
T Consensus 390 ~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 469 (509)
T PRK12406 390 DADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLKARL 469 (509)
T ss_pred cCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999887788899999887665667899999999999
Q ss_pred CCCCcccEEEEeCccCCCCCCcccHHHHHcccCcCCC
Q 008895 509 SPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 509 ~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
+++++|..++++++||+|++||++|++|++.+.+.++
T Consensus 470 ~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~~~ 506 (509)
T PRK12406 470 AGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWANAG 506 (509)
T ss_pred ccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhhcc
Confidence 9999999999999999999999999999998876554
No 103
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-63 Score=499.06 Aligned_cols=501 Identities=25% Similarity=0.322 Sum_probs=413.3
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~ 112 (549)
-+|....+........ -++.+|++... +...+||.|+.+++.++|..|.+ .|+++||+|++++|+.+++++++
T Consensus 62 ~ln~~~n~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-~g~~kGD~V~~~mPm~~e~~ia~ 138 (626)
T KOG1175|consen 62 FLNACYNCLDRHIKEK--GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-CGLKKGDTVAIYMPMIPEAVIAM 138 (626)
T ss_pred hhhhhHhhhhhhhhhc--CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-cCCCCCcEEEEeccCChHHHHHH
Confidence 3677776666643221 16777776431 12458999999999999999996 99999999999999999999999
Q ss_pred HHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-------------------CCeEEEec----CC
Q 008895 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------------------KHRTILID----SP 169 (549)
Q Consensus 113 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------------------~~~~~~~~----~~ 169 (549)
+||.++|++.+++...++...+..++.++++++|++.+......... ....+.+. +.
T Consensus 139 lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 218 (626)
T KOG1175|consen 139 LACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDL 218 (626)
T ss_pred HHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccc
Confidence 99999999999999999999999999999999999987543321110 00111111 11
Q ss_pred chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH
Q 008895 170 EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL 249 (549)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~ 249 (549)
.|......... .......+.+++.+|+|||||||.||++.+++....-.............++|++++.....|+.|.
T Consensus 219 ~~~~~~~~a~~--~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~ 296 (626)
T KOG1175|consen 219 FWSLELKKASP--EHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGH 296 (626)
T ss_pred cHHHHhhhcCC--CCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeecc
Confidence 22222222111 2224456778999999999999999999999886655544444444468899999999999999988
Q ss_pred -HHHHHHhhhccEEEEec--CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCC--CCCCCCCceEEEEecCCCCHHHH
Q 008895 250 -FFCFRAAALMETAVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTI 324 (549)
Q Consensus 250 -~~~~~~l~~g~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~~Ge~l~~~~~ 324 (549)
+..++++..|+++++.. ++++..+++.+.++++|+++..|+.++.|.+.... ...++++||.+.++||++.++..
T Consensus 297 ~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ 376 (626)
T KOG1175|consen 297 SYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAW 376 (626)
T ss_pred chhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchH
Confidence 55677999999999975 46999999999999999999999999987765543 33445789999999999999999
Q ss_pred HHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCC-CcceEEEecC---Ccc
Q 008895 325 MAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG-KEGELSIRGP---TIM 400 (549)
Q Consensus 325 ~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g-~~Gel~v~g~---~~~ 400 (549)
+++.+.++.-++.+.||+||+|..++.+........+++.+.|.+|+.+.|+| ++++.++.+ +.|+|+++.+ +.+
T Consensus 377 ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~P~~~~ 455 (626)
T KOG1175|consen 377 EWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKPPWPPGMF 455 (626)
T ss_pred HHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeCCCCcccc
Confidence 99999994336999999999999988765444367889999999999999999 578888776 8999999973 779
Q ss_pred cccCCCccccccccCC--CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCC
Q 008895 401 KGYVGEPEVTSATLLP--DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEE 478 (549)
Q Consensus 401 ~gy~~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~ 478 (549)
++||++++........ .|+|.|||.+++|+||++++.||.||+++++|.++++.|||+++.+||.|.|++||+.+++.
T Consensus 456 r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~ 535 (626)
T KOG1175|consen 456 RTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPI 535 (626)
T ss_pred ccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCC
Confidence 9999999955555444 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 479 AGQMPMAFVVRQPHSSLNE---AEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 479 ~~~~~~~~v~~~~~~~~~~---~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
.++.+++||+++++..... ++|.+++++.+.+++.|+.|.+++.||+|.|||+.|+.||+.+...
T Consensus 536 ~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 536 KGEVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred CCeEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC
Confidence 9999999999998854332 5788888999999999999999999999999999999999988765
No 104
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.2e-63 Score=507.32 Aligned_cols=480 Identities=27% Similarity=0.392 Sum_probs=378.1
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCC--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~--~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~ 115 (549)
.++...+.++++.+ |+.+|+..... .+.+||+|+.+++..+|++|++ .|+..||+|+|++.|+++|+++.+||
T Consensus 16 ~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~-lg~~~gdrvai~a~nr~eW~i~d~a~ 90 (613)
T COG1022 16 HTLPKRLAERVKDR----PDGVALMYKELGGWEAITYRELYERVRALASGLLS-LGIPAGDRVAIFAANRPEWAIADLAI 90 (613)
T ss_pred ccHHHHHHHHhhcC----CcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 57889999999999 88888875432 4799999999999999999999 99977999999999999999999999
Q ss_pred HHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHH-HhcCCC--eEEE-----ec---------CCchhhhhccc
Q 008895 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHK-LAKLKH--RTIL-----ID---------SPEFDSMTMSW 178 (549)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~-~~~~~~--~~~~-----~~---------~~~~~~~~~~~ 178 (549)
+.+|++.||+.++.+++.+.++|+++++++|+++...... +..... ..+. ++ ...+.......
T Consensus 91 ~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (613)
T COG1022 91 LALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEG 170 (613)
T ss_pred HHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhcccccccccc
Confidence 9999999999999999999999999999999998854332 221111 0000 00 00000000000
Q ss_pred CC-------CccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHH
Q 008895 179 NS-------KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF 251 (549)
Q Consensus 179 ~~-------~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~ 251 (549)
.. ..........++|+|.|+|||||||.||||++||+|+++++.......+...++|+.++.+|+.|++...+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~ 250 (613)
T COG1022 171 ISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAF 250 (613)
T ss_pred chhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHH
Confidence 00 00111134578999999999999999999999999999999999988843779999999999999999865
Q ss_pred HHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC----CCC------------------------
Q 008895 252 CFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----TDG------------------------ 303 (549)
Q Consensus 252 ~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~----~~~------------------------ 303 (549)
. ..+..++........++..+++.++.++||+++++|.+|+.+-+... ...
T Consensus 251 ~-~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~ 329 (613)
T COG1022 251 E-GGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLG 329 (613)
T ss_pred H-HHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcc
Confidence 3 23333344444445589999999999999999999998855432211 000
Q ss_pred ------------------C-CC-CCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCc
Q 008895 304 ------------------Y-DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGS 363 (549)
Q Consensus 304 ------------------~-~l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~ 363 (549)
. .+ .++|.+++||+++++++...++.. ++++.++||+|||++.++.+ .......++
T Consensus 330 ~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~--~~~~~~~gt 405 (613)
T COG1022 330 GGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVN--PPDRFVLGT 405 (613)
T ss_pred cCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEc--cccCcccCC
Confidence 0 01 378999999999999999999998 89999999999999988774 445567899
Q ss_pred cccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCe
Q 008895 364 TGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDL 443 (549)
Q Consensus 364 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ 443 (549)
+|.|+|+++++|.| .|||+|+||.+|+|||++|+.|.+.|++||||+|||+|.+|++|++++.||++|+
T Consensus 406 vG~p~p~~evKI~d-----------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~ 474 (613)
T COG1022 406 VGKPLPGIEVKIAD-----------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKEL 474 (613)
T ss_pred cCCcCCCceEEEcc-----------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccce
Confidence 99999999999998 4999999999999999999999999999999999999999999999999999999
Q ss_pred eee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCC------------CCH------HHHHH--
Q 008895 444 IKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSS------------LNE------AEIME-- 502 (549)
Q Consensus 444 i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~------------~~~------~~i~~-- 502 (549)
||. +|++|.|..||+.+..+|-|.+.+|++ .+ ...+.+.|++..+.- .+. .++.+
T Consensus 475 i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~---k~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~ 550 (613)
T COG1022 475 IKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DD---KKFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLI 550 (613)
T ss_pred EECCCCcccChHHHHHHHhcCCCeeEEEEEe-cC---CcceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHH
Confidence 999 999999999999999999999999997 22 347888888654310 011 11222
Q ss_pred --HHH---hcCCCCCcccEEEEe-CccC-----CCCCCcccHHHHHcccCc
Q 008895 503 --FVA---RQVSPYKKIRRVAFI-NAIP-----KSAAGKILRMELRKVAVP 542 (549)
Q Consensus 503 --~l~---~~l~~~~~p~~i~~v-~~lP-----~t~~GKv~r~~l~~~~~~ 542 (549)
.+. ..+..+.++..+... .++. .|++-|++|..+.+.+..
T Consensus 551 ~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~ 601 (613)
T COG1022 551 LPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKD 601 (613)
T ss_pred HHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhh
Confidence 221 124556677655554 3444 488999999998887754
No 105
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-63 Score=532.29 Aligned_cols=506 Identities=21% Similarity=0.259 Sum_probs=384.9
Q ss_pred CCCceeccCC----CCCCCCCCCCCCCHHHHHhhcccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHH
Q 008895 17 SATKTFHSLR----PPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQN 88 (549)
Q Consensus 17 ~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~a~~~A~~L~~ 88 (549)
++..++++.. ...++|....+.++.+.|.+.++++ |+++|+++... .+.+||+||.++++++|++|++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~----pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~ 99 (624)
T PRK12582 24 PDISVERRADGSIVIKSRHPLGPYPRSIPHLLAKWAAEA----PDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLD 99 (624)
T ss_pred CceEEEEcCCceEEEecCCCCCCcccCHHHHHHHHHHHC----CCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHH
Confidence 3344444443 2345665555689999999999999 99999986421 1689999999999999999998
Q ss_pred hcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCH-----HHHHHHHhhcCCeEEEEcCcc-HH-HHh---c
Q 008895 89 VTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTE-----SEISRQIQLSNPVIAFATSSV-VH-KLA---K 158 (549)
Q Consensus 89 ~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~-~~-~~~---~ 158 (549)
.|+++||+|+++++|++++++++|||+++|++++|++|.++. +++.++++.++++++|+++.. .. .+. .
T Consensus 100 -~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 178 (624)
T PRK12582 100 -LGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL 178 (624)
T ss_pred -cCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh
Confidence 899999999999999999999999999999999999999874 899999999999999998642 11 111 1
Q ss_pred CCCeEEEecCC-------chhhhhcccCCC-ccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCC
Q 008895 159 LKHRTILIDSP-------EFDSMTMSWNSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (549)
Q Consensus 159 ~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~ 230 (549)
.....+.++.. .+.++....... .........++++++++|||||||.||+|+++|+++..+..........
T Consensus 179 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~ 258 (624)
T PRK12582 179 LDVTVVHVTGPGEGIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPR 258 (624)
T ss_pred cCceEEEEcCCCcccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccc
Confidence 12334444321 233322211100 0001122456889999999999999999999999998877655443321
Q ss_pred CC--CCcEEEEecChhhHHHH-HHHHHHhhhccEEEEecC-cCH---HHHHHHHHHhceeeeeecHHHHHHHHhCCCCC-
Q 008895 231 RV--SPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR-FDL---KMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD- 302 (549)
Q Consensus 231 ~~--~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~-~~~---~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~- 302 (549)
.. ..++.+.++|++|.+|+ ..++.++..|+++++.+. +++ ..+++.++++++|+++++|.++..|++.....
T Consensus 259 ~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~ 338 (624)
T PRK12582 259 EPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDD 338 (624)
T ss_pred cCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCH
Confidence 11 25789999999999998 445678888999888652 333 45677788999999999999998887643221
Q ss_pred ---CCCCCCceEEEEecCCCCHHHHHHHHHhC----C-CCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEE
Q 008895 303 ---GYDLSSLETVACGAAPLGKDTIMAFASKF----P-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAK 374 (549)
Q Consensus 303 ---~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~----~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 374 (549)
...++++|.+++||+++++++.+++.+.+ + ++.+++.||+||++.++..... .....+++|+|++|++++
T Consensus 339 ~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~--~~~~~~svG~p~pg~~v~ 416 (624)
T PRK12582 339 ALRRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHW--DTERVGLIGLPLPGVELK 416 (624)
T ss_pred HHHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccC--CCCCCCCCCcCCCCcEEE
Confidence 12368999999999999999999998863 2 3679999999999876553211 224567999999999999
Q ss_pred EEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEE-e---cCCeEEEEcccCCeeee-CcE
Q 008895 375 IVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYI-D---EDGFLFIVDRLKDLIKY-KGY 449 (549)
Q Consensus 375 i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~-~---~~g~~~~~GR~~d~i~~-~G~ 449 (549)
+++ .|+.|||+|+|++++.||+++|+.+.+.|..+|||+|||+|++ | ++|++++.||+||+|++ +|+
T Consensus 417 i~~--------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~ 488 (624)
T PRK12582 417 LAP--------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGT 488 (624)
T ss_pred Ecc--------CCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCc
Confidence 864 5778999999999999999999999999988999999999998 4 46999999999999997 899
Q ss_pred eeChHHHH--HHHHcCCCcceEEEEeecCCCCCceeEEEEEeCC----------CC----CCCHHHHHHHHHhcC-----
Q 008895 450 QVAPAELE--HLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQP----------HS----SLNEAEIMEFVARQV----- 508 (549)
Q Consensus 450 ~v~~~~IE--~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~----------~~----~~~~~~i~~~l~~~l----- 508 (549)
+|+|.+|| .++.+||.|.+++|++.+++.. .+.|++.. +. ..+.+++.++++..|
T Consensus 489 ~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~----g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 564 (624)
T PRK12582 489 WVSVGTLRPDAVAACSPVIHDAVVAGQDRAFI----GLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNA 564 (624)
T ss_pred EechHHHHHHHHHhcCcchheEEEEcCCCCcE----EEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHh
Confidence 99998885 6788999999999998876543 33433211 10 013345666665554
Q ss_pred --CCCC-cccEEEEeCccCC------CCCCcccHHHHHcccC
Q 008895 509 --SPYK-KIRRVAFINAIPK------SAAGKILRMELRKVAV 541 (549)
Q Consensus 509 --~~~~-~p~~i~~v~~lP~------t~~GKv~r~~l~~~~~ 541 (549)
+.+. +|+.+++++++|+ |++||+.|+++.+.|.
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~ 606 (624)
T PRK12582 565 EAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRA 606 (624)
T ss_pred hcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHH
Confidence 4444 9999999988775 5677888988877664
No 106
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.3e-62 Score=561.64 Aligned_cols=486 Identities=21% Similarity=0.280 Sum_probs=399.7
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
..++.+.+.+.+++++ |++.|+.+. .++++||+||+++++++|+.|++ |+++||+|+++++|+.+++++++||+
T Consensus 630 ~~~~~~~l~~~~~~~~---~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~--g~~~gd~V~i~~~n~~~~~~~~la~~ 703 (1140)
T PRK06814 630 DRTLFEALIEAAKIHG---FKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK--NTPPGENVGVMLPNANGAAVTFFALQ 703 (1140)
T ss_pred cCCHHHHHHHHHHHcC---CCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH
Confidence 3678888888888883 466777653 36799999999999999999975 89999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHH------hc--CCCeEEEecCCc-----hhhhhccc-CCCc
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL------AK--LKHRTILIDSPE-----FDSMTMSW-NSKH 182 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~------~~--~~~~~~~~~~~~-----~~~~~~~~-~~~~ 182 (549)
++|++++|++|..+.+++.+++++++++++++++...+.. .. ....++.++... +....... ....
T Consensus 704 ~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1140)
T PRK06814 704 SAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFP 783 (1140)
T ss_pred HCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCC
Confidence 9999999999999999999999999999999987654321 11 122344333211 00000000 0000
Q ss_pred cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccE
Q 008895 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (549)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~ 261 (549)
........++++++++|||||||.||+|.++|+++.++.......+ ...++|++++.+|++|.+++ ...+.++..|++
T Consensus 784 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~ 862 (1140)
T PRK06814 784 LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVK 862 (1140)
T ss_pred ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCE
Confidence 1111134678999999999999999999999999998887776666 46788999999999999998 667888999999
Q ss_pred EEEecC-cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEccc
Q 008895 262 AVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (549)
Q Consensus 262 ~~~~~~-~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~y 340 (549)
+++.+. .+...+.+.++++++|+++.+|+++..+.+.. ...+++++|.+++||+++++++.+.+.+.+ +.++++.|
T Consensus 863 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~Y 939 (1140)
T PRK06814 863 VFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGY 939 (1140)
T ss_pred EEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEecc
Confidence 988763 56778899999999999999999999887653 345678999999999999999999999988 78999999
Q ss_pred CccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCee
Q 008895 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (549)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~ 420 (549)
|+||++..+.... ......+++|+|.|++++++.+.+ + .++.|||+++|++++.||+++++........+|||
T Consensus 940 G~TE~~~~~~~~~--~~~~~~~~vG~p~~g~~~~~~~~~-~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~ 1012 (1140)
T PRK06814 940 GVTETAPVIALNT--PMHNKAGTVGRLLPGIEYRLEPVP-G----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWY 1012 (1140)
T ss_pred ccccccceEEecC--CCCCCCCcCCccCCCCeEEEeecC-C----CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeE
Confidence 9999987665432 223356789999999999998732 2 35779999999999999998765432222358999
Q ss_pred ecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHH
Q 008895 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEI 500 (549)
Q Consensus 421 ~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i 500 (549)
+|||+|++|+||++++.||.||++|++|++|+|.|||++|.+++.+.+++|++++++..++.+++++. ....+.+++
T Consensus 1013 ~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~---~~~~~~~~l 1089 (1140)
T PRK06814 1013 DTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTT---ASDATRAAF 1089 (1140)
T ss_pred ecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEc---CCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888777654 234577899
Q ss_pred HHHHHhc-CCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 501 MEFVARQ-VSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 501 ~~~l~~~-l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
.++++++ ++++++|..+++++++|+|++||+||++|++++.+
T Consensus 1090 ~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 1132 (1140)
T PRK06814 1090 LAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEE 1132 (1140)
T ss_pred HHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHH
Confidence 9999874 99999999999999999999999999999998754
No 107
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-62 Score=508.78 Aligned_cols=443 Identities=21% Similarity=0.279 Sum_probs=379.8
Q ss_pred ccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCC
Q 008895 48 RATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 48 ~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~ 127 (549)
++++ |+++|+++. ++.+||.||.++++++|+.|.+ .|+.+|++|+++++|+++++++++||+++|++++|+++
T Consensus 13 a~~~----~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~ 85 (458)
T PRK09029 13 AQVR----PQAIALRLN--DEVLTWQQLCARIDQLAAGFAQ-QGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNP 85 (458)
T ss_pred HHhC----CCceeeecC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCC
Confidence 5667 999999976 7899999999999999999999 89999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEEEccCCCCCcc
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRV 207 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~p 207 (549)
..+.+++..+++++++++++++++... .... .... .. ... ........++++++++|||||||.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~--~~~~-----~~----~~~---~~~~~~~~~~~~a~i~~TSGTTG~P 150 (458)
T PRK09029 86 QLPQPLLEELLPSLTLDFALVLEGENT-FSAL--TSLH-----LQ----LVE---GAHAVAWQPQRLATMTLTSGSTGLP 150 (458)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc--cccc-----cc----ccc---ccCcccCCCCCeEEEEECCCCCCCC
Confidence 999999999999999999999876432 1110 0000 00 000 1112234578899999999999999
Q ss_pred chhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeee
Q 008895 208 KGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAV 287 (549)
Q Consensus 208 K~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 287 (549)
|+|.++|++++.........+ ....+++++..+|++|.+|+...+.++..|+++++.+. ..+++.+ .++|.+..
T Consensus 151 Kgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~---~~~~~~i--~~~t~~~~ 224 (458)
T PRK09029 151 KAAVHTAQAHLASAEGVLSLM-PFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK---QPLEQAL--AGCTHASL 224 (458)
T ss_pred CEEEEeHHHHHHHHHHHhhcC-CCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh---HHHHHHH--hhceeeec
Confidence 999999999999888777766 46778899999999999999777788999999888764 4566666 37899999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccc
Q 008895 288 TPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRL 367 (549)
Q Consensus 288 ~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~ 367 (549)
+|+++..++..... ..++|.+++||+++++.+.+.+.+. +.++++.||+||++...+.... ....++|+|
T Consensus 225 ~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~----~~~~~~G~~ 294 (458)
T PRK09029 225 VPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKRA----DGLAGVGSP 294 (458)
T ss_pred ChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccCC----CCCCCCCCC
Confidence 99999988876432 3579999999999999999998875 7899999999999865543221 123569999
Q ss_pred cCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeC
Q 008895 368 SAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYK 447 (549)
Q Consensus 368 ~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~ 447 (549)
++++.+++++ |||+|+|+.++.||+++++.+.... .+|||+|||+|++| +|.+++.||++|++|++
T Consensus 295 ~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~ 360 (458)
T PRK09029 295 LPGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFSG 360 (458)
T ss_pred CCCCEEEEeC------------CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEecccccceeeC
Confidence 9999999987 9999999999999999988776443 57899999999999 99999999999999999
Q ss_pred cEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCC
Q 008895 448 GYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSA 527 (549)
Q Consensus 448 G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~ 527 (549)
|.+|+|.+||++|.++|+|.+++|++.++...++.++++|+... ..+.++++++++++|++|++|..+++++++|+|+
T Consensus 361 G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~--~~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~ 438 (458)
T PRK09029 361 GEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDS--EAAVVNLAEWLQDKLARFQQPVAYYLLPPELKNG 438 (458)
T ss_pred CEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCc--ccCHHHHHHHHHhhchhccCCeEEEEecccccCc
Confidence 99999999999999999999999999999888899999998663 3578899999999999999999999999999999
Q ss_pred CCcccHHHHHcccCcCC
Q 008895 528 AGKILRMELRKVAVPSG 544 (549)
Q Consensus 528 ~GKv~r~~l~~~~~~~~ 544 (549)
+||++|+.|++++....
T Consensus 439 ~gKi~r~~L~~~~~~~~ 455 (458)
T PRK09029 439 GIKISRQALKEWVAQQL 455 (458)
T ss_pred CCCcCHHHHHHHHHhcc
Confidence 99999999999987543
No 108
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=6.2e-63 Score=515.14 Aligned_cols=436 Identities=18% Similarity=0.246 Sum_probs=343.3
Q ss_pred cCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc------HHHHh---c-CCCeEEEecC---
Q 008895 102 STNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV------VHKLA---K-LKHRTILIDS--- 168 (549)
Q Consensus 102 ~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~---~-~~~~~~~~~~--- 168 (549)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.. ...+. . .....+.+..
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 11111 1 1112222210
Q ss_pred ----------CchhhhhcccCC----Cc-cccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCC
Q 008895 169 ----------PEFDSMTMSWNS----KH-ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVS 233 (549)
Q Consensus 169 ----------~~~~~~~~~~~~----~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 233 (549)
..+.++...... .. ........++++++|+|||||||.||||+++|++++.+.......+ ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~ 159 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHM-DIQP 159 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhc-CCCC
Confidence 123332211000 00 0011122458899999999999999999999999887665444444 4567
Q ss_pred CcEEEEecChhhHHHHHHHHHHhhhccEEEEecC-cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC--CCCCCCCCce
Q 008895 234 PAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLE 310 (549)
Q Consensus 234 ~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~lr 310 (549)
+|++++.+|++|.+++...+.++..|+++++.+. +++..+++.|+++++|+++++|+++..|++... ....++++||
T Consensus 160 ~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr 239 (499)
T PLN03051 160 GDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLR 239 (499)
T ss_pred CCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhhe
Confidence 8999999999999998777889999999998864 788999999999999999999999999887543 2345678999
Q ss_pred EEEEecCCCCHHHHHHHHHhCC-CCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCC--
Q 008895 311 TVACGAAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG-- 387 (549)
Q Consensus 311 ~v~~~Ge~l~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g-- 387 (549)
.+++||+++++++.+++++.++ ++.+++.||+||++....... .......+++|+|.++++++|+| +++++++.|
T Consensus 240 ~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~-~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~ 317 (499)
T PLN03051 240 VFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISST-LLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQP 317 (499)
T ss_pred EEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccc-ccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCC
Confidence 9999999999999988777431 478999999999875433221 11223457899999999999999 678889888
Q ss_pred CcceEEEecCCc--ccccCCCccccccccCCC---------CeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHH
Q 008895 388 KEGELSIRGPTI--MKGYVGEPEVTSATLLPD---------GWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAEL 456 (549)
Q Consensus 388 ~~Gel~v~g~~~--~~gy~~~~~~~~~~~~~~---------~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~I 456 (549)
+.|||+|+|+.+ +.||++++. +. .+..+ +||+|||+|++|+||+++++||+||+||++|++|+|.||
T Consensus 318 ~~Gel~v~g~~~~~~~gy~~~~~-~~-~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EI 395 (499)
T PLN03051 318 CVGEVALAPPMLGASDRLLNADH-DK-VYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEI 395 (499)
T ss_pred cceEEEEecCcCCCCccccCCcc-cc-eeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHH
Confidence 479999999976 589998653 32 33211 279999999999999999999999999999999999999
Q ss_pred HHHHHc-CCCcceEEEEeecCCCCC-ceeEEEE---EeCCCC-CCCHHHHHHHHH----hcCCCCCcccEEEEeCccCCC
Q 008895 457 EHLLLS-HREVADAAVIPYPDEEAG-QMPMAFV---VRQPHS-SLNEAEIMEFVA----RQVSPYKKIRRVAFINAIPKS 526 (549)
Q Consensus 457 E~~l~~-~~~v~~~~vv~~~~~~~~-~~~~~~v---~~~~~~-~~~~~~i~~~l~----~~l~~~~~p~~i~~v~~lP~t 526 (549)
|++|.+ ||+|.+++|++++++..+ +.+++|| +++++. ..+.++++++|+ ++|++++.|..|+++++||+|
T Consensus 396 E~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v~~lP~t 475 (499)
T PLN03051 396 ERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIVPELPRN 475 (499)
T ss_pred HHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEcCCCCCC
Confidence 999986 999999999999998888 6888998 766553 356677776664 557777777789999999999
Q ss_pred CCCcccHHHHHcccCc
Q 008895 527 AAGKILRMELRKVAVP 542 (549)
Q Consensus 527 ~~GKv~r~~l~~~~~~ 542 (549)
++|||+|++|++.+.+
T Consensus 476 ~~GKi~r~~L~~~~~~ 491 (499)
T PLN03051 476 ASNKLLRRVLRDQLKK 491 (499)
T ss_pred CCccHHHHHHHHHHHH
Confidence 9999999999987644
No 109
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-63 Score=524.21 Aligned_cols=493 Identities=21% Similarity=0.308 Sum_probs=394.3
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCC--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~--~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~ 115 (549)
-++.+++...++++ |+.+ +++... .+.+||.||++++.++|.+|++ .|+++|++|+++++|++++++++|||
T Consensus 21 ~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~ 94 (579)
T PRK09192 21 PTLVEALDYAALGE----AGMN-FYDRRGQLEEALPYQTLRARAEAGARRLLA-LGLKPGDRVALIAETDGDFVEAFFAC 94 (579)
T ss_pred hhHHHHHHHhhccC----CceE-EEecCCCEEEEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCchhHHHHHHHH
Confidence 48999999999888 7554 444321 2679999999999999999998 89999999999999999999999999
Q ss_pred HHcCCeEccCCCCCC-------HHHHHHHHhhcCCeEEEEcCccHHHHhcC--CCeEEEecCCchhhhhcccCCCccccc
Q 008895 116 LSLGVIISPANPVNT-------ESEISRQIQLSNPVIAFATSSVVHKLAKL--KHRTILIDSPEFDSMTMSWNSKHELDR 186 (549)
Q Consensus 116 ~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (549)
+++|++++|+++..+ .+++.++++.++++++++++...+.+.+. ....+.+ ..+.++...... ....
T Consensus 95 ~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 170 (579)
T PRK09192 95 QYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHV--LSHAWFKALPEA--DVAL 170 (579)
T ss_pred HHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccce--eehhhhcccCCC--cccc
Confidence 999999999986433 68899999999999999998766554432 1111111 112222111110 1112
Q ss_pred cccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhc-cCCCCCCCcEEEEecChhhHHHHH-HHHHHhhhccEEEE
Q 008895 187 AKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA-SSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAALMETAVV 264 (549)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l~~g~~~~~ 264 (549)
....++++++++|||||||.||+|.++|+++...+..... .+ ...++|+++..+|++|.+|+. .++.++..|+++++
T Consensus 171 ~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~ 249 (579)
T PRK09192 171 PRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-KVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDY 249 (579)
T ss_pred CCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-cCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEe
Confidence 2345688999999999999999999999999988877666 44 567889999999999999985 45567888888876
Q ss_pred ecC----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC---CCCCCCCCceEEEEecCCCCHHHHHHHHHhCCC----
Q 008895 265 MQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS---TDGYDLSSLETVACGAAPLGKDTIMAFASKFPK---- 333 (549)
Q Consensus 265 ~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~---~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~---- 333 (549)
... .++..+++.+.++++++++..|..+..+..... ....+++++|.+++||+++++.+.+.+.+.++.
T Consensus 250 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~ 329 (579)
T PRK09192 250 LPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFD 329 (579)
T ss_pred eCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCC
Confidence 642 367899999999999987765554444433221 223467899999999999999999999988731
Q ss_pred -CcEEcccCccccccceecccCcCC--------------------------CCCCCccccccCCcEEEEEcCCCCCcCCC
Q 008895 334 -VVLVQAYGLTESTAGVFRTVGPDE--------------------------CRRWGSTGRLSAGLEAKIVDPETGDSLPP 386 (549)
Q Consensus 334 -~~l~~~yG~tE~~~~~~~~~~~~~--------------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~ 386 (549)
..+++.||+||++..+........ .....++|.++|+++++|+| ++++.++.
T Consensus 330 ~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~ 408 (579)
T PRK09192 330 DKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPE 408 (579)
T ss_pred hhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCC
Confidence 358899999999765554221100 01124789999999999999 66888999
Q ss_pred CCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCc
Q 008895 387 GKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREV 466 (549)
Q Consensus 387 g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v 466 (549)
|+.|||+++|+.++.||+++ ..+...+..++||+|||+|++ ++|+++++||+||+||++|++|+|.+||++|.+||+|
T Consensus 409 g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V 486 (579)
T PRK09192 409 RVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAEQEPEL 486 (579)
T ss_pred CCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHHhcCCc
Confidence 99999999999999999999 666777778999999999999 9999999999999999999999999999999999999
Q ss_pred c--eEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCC-CCCcccEEEEeC--ccCCCCCCcccHHHHHcccC
Q 008895 467 A--DAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVS-PYKKIRRVAFIN--AIPKSAAGKILRMELRKVAV 541 (549)
Q Consensus 467 ~--~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~-~~~~p~~i~~v~--~lP~t~~GKv~r~~l~~~~~ 541 (549)
. +++|++++++. ++.++++++..+....+.+++.+++++.+. .++.|..+.++. +||+|++||++|++|++++.
T Consensus 487 ~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~ 565 (579)
T PRK09192 487 RSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQLIHALAALVRSEFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYL 565 (579)
T ss_pred cCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHHHHHHHHHHHHHhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHH
Confidence 8 89999998875 457888887765555567889999999874 678888777774 89999999999999999999
Q ss_pred cCCC
Q 008895 542 PSGS 545 (549)
Q Consensus 542 ~~~~ 545 (549)
++.+
T Consensus 566 ~~~~ 569 (579)
T PRK09192 566 SGAF 569 (579)
T ss_pred cCCC
Confidence 8876
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-62 Score=523.43 Aligned_cols=490 Identities=23% Similarity=0.328 Sum_probs=379.7
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v 110 (549)
+++.+.|...+..+ |+++|+++.. ..+++||.||..+++++|++|++ .| .+||+|+++++|++++++
T Consensus 1 ~s~~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~-~g-~~gd~V~l~~~n~~~~~~ 74 (578)
T PRK05850 1 SSVPSLLRERASLQ----PDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRR-HG-STGDRAVILAPQGLEYIV 74 (578)
T ss_pred CcHHHHHHHHHhcC----CCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCcccHHH
Confidence 36788889999888 9999998531 12689999999999999999998 88 689999999999999999
Q ss_pred HHHHHHHcCCeEccCCC---CCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-------CC-eEEEecCCchhhhhcccC
Q 008895 111 LYFSLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KH-RTILIDSPEFDSMTMSWN 179 (549)
Q Consensus 111 ~~la~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~ 179 (549)
++|||+++|++++|+++ ..+.+++.+++++++++++++++.....+... .. .++.++...+. ..
T Consensus 75 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 149 (578)
T PRK05850 75 AFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLDLD---SP-- 149 (578)
T ss_pred HHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecccccc---cC--
Confidence 99999999999999997 45789999999999999999998766654321 11 12222211110 00
Q ss_pred CCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC-C----CCCCCcEEEEecChhhHHHH-HHHH
Q 008895 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-P----KRVSPAVMLFTMPYFHIYGL-FFCF 253 (549)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~----~~~~~~~~~~~~pl~~~~g~-~~~~ 253 (549)
. ........+++.++++|||||||.||+|.++|+++.++........ . ....++++++.+|++|.+|+ ...+
T Consensus 150 -~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 227 (578)
T PRK05850 150 -R-GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVC 227 (578)
T ss_pred -C-ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHH
Confidence 0 1111234568999999999999999999999999987765543322 1 13457899999999999998 5578
Q ss_pred HHhhhccEEEEecC----cCHHHHHHHHHHhceeeeeecHHHHHH-HHhCCC---CCCCCCCCceEEEEecCCCCHHHHH
Q 008895 254 RAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVA-MSKGGS---TDGYDLSSLETVACGAAPLGKDTIM 325 (549)
Q Consensus 254 ~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~-l~~~~~---~~~~~l~~lr~v~~~Ge~l~~~~~~ 325 (549)
.++..|+++++..+ .++..+++.+.++++++. .+|+.+.. +..... .....++++|.+++||+++++++.+
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~ 306 (578)
T PRK05850 228 APILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLK 306 (578)
T ss_pred HHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHH
Confidence 89999999988864 268999999999999865 55655433 333221 1234578999999999999999999
Q ss_pred HHHHhCC-----CCcEEcccCccccccceecccCcCC-----------------------CCCCCccccccCCcEEEEEc
Q 008895 326 AFASKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-----------------------CRRWGSTGRLSAGLEAKIVD 377 (549)
Q Consensus 326 ~~~~~~~-----~~~l~~~yG~tE~~~~~~~~~~~~~-----------------------~~~~~~~G~~~~~~~~~i~d 377 (549)
+|.+.|+ +..+.+.||+||++..+........ .....++|.|. +.+++++|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd 385 (578)
T PRK05850 307 RFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVD 385 (578)
T ss_pred HHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEc
Confidence 9998773 3468999999998754433211000 00112345543 57899999
Q ss_pred CCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC-----------CCeeecCceEEEecCCeEEEEcccCCeeee
Q 008895 378 PETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-----------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKY 446 (549)
Q Consensus 378 ~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-----------~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~ 446 (549)
++++.+++.|+.|||+|+|++++.||+++++.+.+.|.. ++||+|||+|+++ +|++++.||++|+||+
T Consensus 386 ~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~ 464 (578)
T PRK05850 386 PDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIV 464 (578)
T ss_pred CCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEE
Confidence 888899999999999999999999999999999988842 5799999999997 9999999999999999
Q ss_pred CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCH------HHHHHHHHhcCCC--CCcccEEE
Q 008895 447 KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNE------AEIMEFVARQVSP--YKKIRRVA 518 (549)
Q Consensus 447 ~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~------~~i~~~l~~~l~~--~~~p~~i~ 518 (549)
+|++|+|.+||++|.+||.+ +++|+++++. .++.++++|+.++....+. .++++++...+.. ...|..+.
T Consensus 465 ~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~ 542 (578)
T PRK05850 465 DGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLV 542 (578)
T ss_pred CCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHHHHHHHHHHHhCCCceEEE
Confidence 99999999999999999985 5888888876 6788999998876543332 3455555554443 23466566
Q ss_pred Ee--CccCCCCCCcccHHHHHcccCcCCC
Q 008895 519 FI--NAIPKSAAGKILRMELRKVAVPSGS 545 (549)
Q Consensus 519 ~v--~~lP~t~~GKv~r~~l~~~~~~~~~ 545 (549)
++ +.||+|++|||+|++|++++.++.+
T Consensus 543 ~~~~~~iP~t~~GKi~R~~l~~~~~~~~~ 571 (578)
T PRK05850 543 LVAPGSIPITTSGKIRRAACVEQYRQDEF 571 (578)
T ss_pred EeCCCCcCCCCCchHHHHHHHHHHHcCCc
Confidence 66 4899999999999999999988754
No 111
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=9.6e-62 Score=485.17 Aligned_cols=496 Identities=24% Similarity=0.345 Sum_probs=396.7
Q ss_pred CCCCCHHHHHhhcccCCCCCCCCCcEEEECC------CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChH
Q 008895 35 DAPISAVDYVSSLRATLPWRDDDTVALINSV------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (549)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~------~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~ 108 (549)
+...|+.+.|.+.+..+ |+.+++-.-. .-..+||+|..+++..++..|+. +|+++++.|+|+.-|++||
T Consensus 72 ~~~~T~~~~f~~~~~~~----~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-lG~~~~~~VGIy~~N~pEW 146 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKS----GNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-LGVKEDSKVGIYAFNRPEW 146 (691)
T ss_pred CCcccHHHHhhcchhcc----CCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCceEEEeccCChhh
Confidence 34589999999999999 8888874321 12689999999999999999997 9999999999999999999
Q ss_pred HHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEc-CccHHHHhcC-------CCe-EEEecCC----------
Q 008895 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT-SSVVHKLAKL-------KHR-TILIDSP---------- 169 (549)
Q Consensus 109 ~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~-------~~~-~~~~~~~---------- 169 (549)
+++.+||...|.++||+..+++++.+.++++++++.+++++ +.....+.+. .++ ++.++..
T Consensus 147 iis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~ 226 (691)
T KOG1256|consen 147 IISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAEN 226 (691)
T ss_pred HHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhc
Confidence 99999999999999999999999999999999999999999 4444444321 122 3334322
Q ss_pred ------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHH---hhccCC--CCCCCcEEE
Q 008895 170 ------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS---SFASSP--KRVSPAVML 238 (549)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~---~~~~~~--~~~~~~~~~ 238 (549)
+|+++..............+.|++.|.|+|||||||.||||++||+|+++.+.. ...... .....|+++
T Consensus 227 ~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l 306 (691)
T KOG1256|consen 227 NGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL 306 (691)
T ss_pred CCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE
Confidence 244544433211111114678899999999999999999999999999986543 222221 233469999
Q ss_pred EecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC----CC------------
Q 008895 239 FTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----TD------------ 302 (549)
Q Consensus 239 ~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~----~~------------ 302 (549)
+.+||.|++....-...+..|+.+-+.+. |+..+.+.|+..+||.+.++|.+|..+-+... ..
T Consensus 307 SyLPLAHi~er~~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~ 385 (691)
T KOG1256|consen 307 SYLPLAHIFERVVELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAM 385 (691)
T ss_pred EeCcHHHHHHHHHHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 99999999999777777789999999874 88999999999999999999988754422110 00
Q ss_pred ----------CCCC-------------------CCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceeccc
Q 008895 303 ----------GYDL-------------------SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (549)
Q Consensus 303 ----------~~~l-------------------~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 353 (549)
+... ..+|.+++|++|+++++...++..+ ++++.++||+|||++.++...
T Consensus 386 ~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~ 464 (691)
T KOG1256|consen 386 AYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTL 464 (691)
T ss_pred HHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEecc
Confidence 0000 4789999999999999999999998 899999999999986666533
Q ss_pred CcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCe
Q 008895 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGF 433 (549)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 433 (549)
.. +...+++|.|+|+++++++|+.+.+.-+.+..|||||+|+.++.||+++|+.|.+.++.|||+||||+|+++++|.
T Consensus 465 ~~--d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~ 542 (691)
T KOG1256|consen 465 PG--DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGT 542 (691)
T ss_pred CC--CCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCcc
Confidence 22 2378999999999999999988888888888999999999999999999999999999999999999999999999
Q ss_pred EEEEcccCCeeee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCC--------C--------
Q 008895 434 LFIVDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSL--------N-------- 496 (549)
Q Consensus 434 ~~~~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~--------~-------- 496 (549)
+.++||++++||. .|++|.|..||++....+-|.+.+|.+-. ....++++|+++++... .
T Consensus 543 l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s---~~~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~ 619 (691)
T KOG1256|consen 543 LKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDS---LRSFLVAIVVPDPEVLKSWAAKDGVKGTFEELCR 619 (691)
T ss_pred EEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCc---chhcEEEEEecChhhchhhHHHccCchhHHHHhc
Confidence 9999999999999 89999999999999999999999998543 34688999998654211 0
Q ss_pred ----H----HHHHHHHH-hcCCCCCcccEEEEe------CccCCCCCCcccHHHHHcccCc
Q 008895 497 ----E----AEIMEFVA-RQVSPYKKIRRVAFI------NAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 497 ----~----~~i~~~l~-~~l~~~~~p~~i~~v------~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
. +|+.+.-+ +.|..+.....|.+. +.==+||+-|+.|..|.+.|.+
T Consensus 620 n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~ 680 (691)
T KOG1256|consen 620 NLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKK 680 (691)
T ss_pred ChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHH
Confidence 0 12222221 236667777767664 2222388899999999998854
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.4e-60 Score=490.78 Aligned_cols=436 Identities=27% Similarity=0.422 Sum_probs=369.9
Q ss_pred cHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 008895 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (549)
Q Consensus 71 Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (549)
||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+.+..++++.+++++++++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 79 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDS 79 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999999 8999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCC
Q 008895 151 SVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (549)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~ 230 (549)
...... ... ..+.......... .........+++++++|||||||.||+|.++|+++..........+ .
T Consensus 80 ~~~~~~----~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~ 148 (436)
T TIGR01923 80 LLEEKD----FQA-----DSLDRIEAAGRYE-TSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENL-G 148 (436)
T ss_pred cccccc----eee-----cchHhhhhccccc-ccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhhc-C
Confidence 642211 000 0111111111100 1112234567899999999999999999999999998888777776 5
Q ss_pred CCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCce
Q 008895 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLE 310 (549)
Q Consensus 231 ~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr 310 (549)
..++++++..+|++|.+++...+.++..|+++++.+.+ ..+++.++++++|++.++|+++..+++.... .+++|
T Consensus 149 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~----~~~l~ 222 (436)
T TIGR01923 149 FTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNRLLDEGGH----NENLR 222 (436)
T ss_pred CCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCC----CCceE
Confidence 77889999999999999998888999999999998765 3999999999999999999999999886532 27899
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcc
Q 008895 311 TVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEG 390 (549)
Q Consensus 311 ~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~G 390 (549)
.++++|+++++++.+++.+. +..+++.||+||++............ ...++|.|++++++++.+.+. ++.|
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~i~~~~~------~~~G 293 (436)
T TIGR01923 223 KILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLH-ARPDVGRPLAGREIKIKVDNK------EGHG 293 (436)
T ss_pred EEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccc-cccCCCccCCCcEEEEEeCCC------CCce
Confidence 99999999999999988775 88999999999998765543322222 223589999999999843222 2679
Q ss_pred eEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEE
Q 008895 391 ELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAA 470 (549)
Q Consensus 391 el~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~ 470 (549)
||+++|+.++.||+++++.+...+ .++||+|||+|+++++|.+++.||.+|++|++|.+|++.+||++|.+++.|.+++
T Consensus 294 el~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 372 (436)
T TIGR01923 294 EIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAV 372 (436)
T ss_pred EEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEE
Confidence 999999999999999887776554 5799999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHH
Q 008895 471 VIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMEL 536 (549)
Q Consensus 471 vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l 536 (549)
|++.++...+..+.++++..+ ..+.+++.+++++.|+.+++|..++++++||+|++||++|++|
T Consensus 373 v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 373 VVPKPDAEWGQVPVAYIVSES--DISQAKLIAYLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred EeCCcchhcCCeeEEEEEECC--CCCHHHHHHHHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 999887777788889988765 3678899999999999999999999999999999999999875
No 113
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.1e-59 Score=474.23 Aligned_cols=407 Identities=20% Similarity=0.232 Sum_probs=353.9
Q ss_pred EEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhh
Q 008895 61 LINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQL 140 (549)
Q Consensus 61 ~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~ 140 (549)
++.. ++++||.||.++++++|+.|. .++++|++|+++++|+++++++++|++++|++++|+++..+.+.+..++++
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~--~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~ 77 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ--FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKR 77 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHh
Confidence 4455 789999999999999999985 489999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHH
Q 008895 141 SNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA 220 (549)
Q Consensus 141 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~ 220 (549)
++++.+++++.... .. . .....++++++++|||||||.||+|.++|+++.++
T Consensus 78 ~~~~~~i~~~~~~~-----------~~---------~--------~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~ 129 (414)
T PRK08308 78 AGCHGLLYGESDFT-----------KL---------E--------AVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDRE 129 (414)
T ss_pred CCCCEEEecCcccc-----------cc---------c--------CCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHH
Confidence 99999998763110 00 0 01134678999999999999999999999999988
Q ss_pred HHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCC
Q 008895 221 VASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG 299 (549)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~ 299 (549)
.......+ ....+++.+..+|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|+++++|+++..+.+..
T Consensus 130 ~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~ 208 (414)
T PRK08308 130 IEAYNEAL-NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLL 208 (414)
T ss_pred HHHHHHhh-CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcC
Confidence 87766665 35677899999999999998 56788999999999998889999999999999999999999999998764
Q ss_pred CCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCC
Q 008895 300 STDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPE 379 (549)
Q Consensus 300 ~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 379 (549)
.. ..+++.++++|+++++++.+++++. ..++++.||+||++.+.... .....+++|+|++++++++.+.
T Consensus 209 ~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~----~~~~~~~~G~p~~~~~~~~~~~- 277 (414)
T PRK08308 209 PG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICP----DMKSHLDLGNPLPHVSVSAGSD- 277 (414)
T ss_pred Cc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecC----CCCCCCccCccCCCeEEEEecC-
Confidence 32 2368899999999999999999987 56899999999998654321 1234568999999999998752
Q ss_pred CCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHH
Q 008895 380 TGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHL 459 (549)
Q Consensus 380 ~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~ 459 (549)
.++.|||++++ .++||+|||+|+++++|++++.||.||++|++|++|+|.+||++
T Consensus 278 ------~~~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~ 332 (414)
T PRK08308 278 ------ENAPEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDV 332 (414)
T ss_pred ------CCCCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHH
Confidence 35679999974 26799999999999999999999999999999999999999999
Q ss_pred HHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHc
Q 008895 460 LLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRK 538 (549)
Q Consensus 460 l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~ 538 (549)
+.++|+|.+++|++.++...++.++++++... ..+.++++++++++|+.+++|..++++++||+|++||++|+.|+.
T Consensus 333 l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~~ 409 (414)
T PRK08308 333 MLRLPGVQEAVVYRGKDPVAGERVKAKVISHE--EIDPVQLREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLEL 409 (414)
T ss_pred HHhCCCeeEEEEEeccCCCCCceEEEEEEeCC--CCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhhhh
Confidence 99999999999999998888888888888654 467889999999999999999999999999999999999996543
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.1e-59 Score=493.04 Aligned_cols=487 Identities=22% Similarity=0.320 Sum_probs=379.9
Q ss_pred CHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHc
Q 008895 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (549)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~ 118 (549)
++.+.+...+... |+.+++.+...++.+||.||+++++++|++|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~-~g~~~gd~V~l~~~~~~~~~~~~la~~~~ 77 (545)
T PRK07768 3 RFTEKMYANARTS----PRGMVTGEPDAPVRHTWGEVHERARRIAGGLAA-AGVGPGDAVAVLAGAPVEIAPTAQGLWMR 77 (545)
T ss_pred hHHHHHHHHhhCC----CcceEEecCCCceEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHHc
Confidence 5778788888877 999999877667899999999999999999999 89999999999999999999999999999
Q ss_pred CCeEccCCCCCCHHHH-------HHHHhhcCCeEEEEcCccHHHHhcC---CCeEEEecCCchhhhhcccCCCccccccc
Q 008895 119 GVIISPANPVNTESEI-------SRQIQLSNPVIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAK 188 (549)
Q Consensus 119 G~~~v~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (549)
|++++++++..+.+++ ..+++.++++.+++++......... ...++ .++++..... .....
T Consensus 78 g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~----~~~~~ 148 (545)
T PRK07768 78 GASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVL-----TVADLLAADP----IDPVE 148 (545)
T ss_pred CccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCcee-----ehhhhcccCC----CCcCC
Confidence 9999999987775443 4567778999999987654333221 11222 2222222111 11223
Q ss_pred cCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCC-cEEEEecChhhHHHHH-HHHHHhhhccEEEEec
Q 008895 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSP-AVMLFTMPYFHIYGLF-FCFRAAALMETAVVMQ 266 (549)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~pl~~~~g~~-~~~~~l~~g~~~~~~~ 266 (549)
..++++++++|||||||.||+|+++|+++............ .... |++++.+|++|.+++. ..+.++..|++++...
T Consensus 149 ~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 227 (545)
T PRK07768 149 TGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAE-FDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVT 227 (545)
T ss_pred CCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcC-CCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeC
Confidence 45789999999999999999999999999888877666663 4444 8999999999999984 4567788999988875
Q ss_pred C----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCC----CCCCCCCCCceEEEEecCCCCHHHHHHHHHh---C--CC
Q 008895 267 R----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG----STDGYDLSSLETVACGAAPLGKDTIMAFASK---F--PK 333 (549)
Q Consensus 267 ~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~----~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~---~--~~ 333 (549)
+ .++..+.+.+++++++++..+|..+..+.... .....+++++|.++++|+++++++.+++.+. + +.
T Consensus 228 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 307 (545)
T PRK07768 228 PMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRP 307 (545)
T ss_pred HHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCc
Confidence 4 36788899999999999887777766655432 1223567899999999999999999999874 4 22
Q ss_pred CcEEcccCccccccceecccCcC------------------------CCCCCCccccccCCcEEEEEcCCCCCcCCCCCc
Q 008895 334 VVLVQAYGLTESTAGVFRTVGPD------------------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKE 389 (549)
Q Consensus 334 ~~l~~~yG~tE~~~~~~~~~~~~------------------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~ 389 (549)
..+++.||+||++..+....... .....+++|+|+++++++++| +++++++.|+.
T Consensus 308 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~ 386 (545)
T PRK07768 308 EAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGV 386 (545)
T ss_pred ccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCE
Confidence 35899999999987654322110 011335789999999999999 77899999999
Q ss_pred ceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceE
Q 008895 390 GELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADA 469 (549)
Q Consensus 390 Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~ 469 (549)
|||+++|+.++.||++.+.... .+..++||+|||+|+++++|.++++||.+|++|++|++|++.+||++|.++|+|.++
T Consensus 387 Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~ 465 (545)
T PRK07768 387 GVIELRGESVTPGYLTMDGFIP-AQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPG 465 (545)
T ss_pred EEEEEccCcccccccCCCCCcc-cccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCcccccc
Confidence 9999999999999998654433 334578999999999999999999999999999999999999999999999999998
Q ss_pred EEEeec--CCCCCceeEEEEEeCCCCC-CCHHHHHHHHHhcCCCC--CcccEEEEeC--ccCCCCCCcccHHHHHcccCc
Q 008895 470 AVIPYP--DEEAGQMPMAFVVRQPHSS-LNEAEIMEFVARQVSPY--KKIRRVAFIN--AIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 470 ~vv~~~--~~~~~~~~~~~v~~~~~~~-~~~~~i~~~l~~~l~~~--~~p~~i~~v~--~lP~t~~GKv~r~~l~~~~~~ 542 (549)
+|+++. +...++..++++....... ....++.+.+++.+... .+|..+.+++ .||+|++||++|+.|+++++.
T Consensus 466 ~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~~ 545 (545)
T PRK07768 466 NAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAELVTP 545 (545)
T ss_pred eEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcCCCCCchhHHHHHHHHhcCC
Confidence 877664 3333445455544432211 12235666777665543 5787788875 899999999999999998863
No 115
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-57 Score=432.37 Aligned_cols=492 Identities=25% Similarity=0.312 Sum_probs=392.2
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEE-----EC-----CCC-----------ceecHHHHHHHHHHHHHHhHHhcCCCCCC
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALI-----NS-----VTG-----------LRVSFSEFTRRTNSLASYLQNVTRLSKND 96 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~-----~~-----~~~-----------~~~Ty~el~~~a~~~A~~L~~~~g~~~g~ 96 (549)
.|+.+++...++++ .++.++- .. .+| ..+||.|+..++..+|++|.+ +|+++++
T Consensus 41 ~Tl~~~~~~~~~k~----g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~-lG~k~~e 115 (678)
T KOG1180|consen 41 STLYELFEECVKKF----GKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVK-LGLKPKE 115 (678)
T ss_pred ccHHHHHHHHHHhc----CCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHH-hCCCCCC
Confidence 68999999999888 6666642 00 112 568999999999999999999 9999887
Q ss_pred E-EEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-----CCe-EEEecCC
Q 008895 97 T-AFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP 169 (549)
Q Consensus 97 ~-V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~ 169 (549)
. |+|+++.+.+|+.+++||++-+...|-+..++..+.+.+-|.+++++.|+|+.+.+..+... .+. +|.++..
T Consensus 116 ~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~i 195 (678)
T KOG1180|consen 116 TKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYFDPI 195 (678)
T ss_pred CeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEecCC
Confidence 7 99999999999999999999999999999999999999999999999999999988765422 112 3444421
Q ss_pred --------------------chhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCC
Q 008895 170 --------------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP 229 (549)
Q Consensus 170 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~ 229 (549)
+++++....... ...+..+.|+|+|+|||||||||.||||+++|.|+++.+.......+
T Consensus 196 d~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~-~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~ 274 (678)
T KOG1180|consen 196 DYDAAKDDVNSIVRPDIKIISFDDVEKLGKEN-EIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVP 274 (678)
T ss_pred CCccchhhhhhhccCCeEEEEHHHHHhhCCcC-CCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCc
Confidence 122222222111 12233347899999999999999999999999999999999988888
Q ss_pred CCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcCHHHH--------HHHHHHhceeeeeecHHHHHHHHhCCCC
Q 008895 230 KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMM--------LKAVEEFRVTHAAVTPPIVVAMSKGGST 301 (549)
Q Consensus 230 ~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~--------~~~l~~~~~t~l~~~P~~l~~l~~~~~~ 301 (549)
...+.|+++..+||.|++-+.+-+.++..|+.+-...+.....- --.+...|||.+.++|..+.++.+.-..
T Consensus 275 ~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~ 354 (678)
T KOG1180|consen 275 ELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLS 354 (678)
T ss_pred ccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHH
Confidence 88999999999999999999888899999998887654222111 1234568999999999887655432110
Q ss_pred C--------------------------CCC---C-------------CCceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 302 D--------------------------GYD---L-------------SSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 302 ~--------------------------~~~---l-------------~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
+ ... + .+||.+++||+|++++..+.+.-.+ .+++.++
T Consensus 355 kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qG 433 (678)
T KOG1180|consen 355 KVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVLQG 433 (678)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-ccccccc
Confidence 0 000 0 3899999999999999999999888 7799999
Q ss_pred cCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCC--cceEEEecCCcccccCCCccccccccCC-
Q 008895 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK--EGELSIRGPTIMKGYVGEPEVTSATLLP- 416 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~g~~~~~gy~~~~~~~~~~~~~- 416 (549)
||.||++..++.. ...+...+.+|.|++-++++++|-+++.-.+.+. .|||+++|++++.||+++++.|.+.|..
T Consensus 434 YGLTEtca~~tv~--e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~ 511 (678)
T KOG1180|consen 434 YGLTETCAAATVL--EPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVE 511 (678)
T ss_pred ccccchhcccEec--ChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhceec
Confidence 9999999877763 3445567899999999999999977776555554 7999999999999999999999999988
Q ss_pred CC--eeecCceEEEecCCeEEEEcccCCeeee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC
Q 008895 417 DG--WMRTGDLCYIDEDGFLFIVDRLKDLIKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS 493 (549)
Q Consensus 417 ~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~ 493 (549)
+| ||+|||+|++.+||.+.+++|++|.+|. +|+.|++.-+|++++..|-|.+.||.+.+. ...++++|++....
T Consensus 512 ~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~---~s~~VaiVVPn~~~ 588 (678)
T KOG1180|consen 512 DGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSN---KSKPVAIVVPNQKH 588 (678)
T ss_pred CCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEecccc---cceeEEEEcCCchH
Confidence 88 9999999999999999999999999999 999999999999999999999999996543 45899999986531
Q ss_pred --------CC---CH----------HHHHHHH-----HhcCCCCCcccEEEEeCccCCCC-------CCcccHHHHHccc
Q 008895 494 --------SL---NE----------AEIMEFV-----ARQVSPYKKIRRVAFINAIPKSA-------AGKILRMELRKVA 540 (549)
Q Consensus 494 --------~~---~~----------~~i~~~l-----~~~l~~~~~p~~i~~v~~lP~t~-------~GKv~r~~l~~~~ 540 (549)
.. +- +++.+.| ..+|..+.+|..|++. +.|-|| .-|+.|+.++..|
T Consensus 589 lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~-~e~WTPenGlvT~A~KLKRk~I~~~~ 667 (678)
T KOG1180|consen 589 LTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLS-PEPWTPENGLVTAALKLKRKEILAAY 667 (678)
T ss_pred HHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEec-CCCcCCCccccHHHHHhhHHHHHHHH
Confidence 00 10 1222222 3368899999988885 445555 4489999988776
Q ss_pred Cc
Q 008895 541 VP 542 (549)
Q Consensus 541 ~~ 542 (549)
.+
T Consensus 668 k~ 669 (678)
T KOG1180|consen 668 KK 669 (678)
T ss_pred HH
Confidence 43
No 116
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.3e-57 Score=465.86 Aligned_cols=393 Identities=33% Similarity=0.519 Sum_probs=322.1
Q ss_pred HhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEc
Q 008895 44 VSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIIS 123 (549)
Q Consensus 44 ~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v 123 (549)
|.++|+++ ||++|+++ ..++.+||+||+++++++|..|.+ +|+++|++|+++++|+++++++++||+++|++++
T Consensus 1 f~~~a~~~----pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~-~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v 74 (417)
T PF00501_consen 1 FERQAQRY----PDRIALID-DEGRSLTYKQLYERVRKLAAALRK-LGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPV 74 (417)
T ss_dssp HHHHHHHS----TTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHH-TTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEE
T ss_pred ChhHHhhC----CCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHH-hCCCccccccccCCccceeeeeeccccccccccc
Confidence 45678888 99999999 338999999999999999999997 9999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHhhcCCeEEEE----cCccHHHHh---c-C--CCeEEEecCCchh---hhhcccCCCccccccc-c
Q 008895 124 PANPVNTESEISRQIQLSNPVIAFA----TSSVVHKLA---K-L--KHRTILIDSPEFD---SMTMSWNSKHELDRAK-V 189 (549)
Q Consensus 124 ~l~~~~~~~~l~~~l~~~~~~~ii~----~~~~~~~~~---~-~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~ 189 (549)
|++|.++.+++.++++.++++++|+ +......+. . . ....+.++...+. .+....... ... .. .
T Consensus 75 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 152 (417)
T PF00501_consen 75 PLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLSD-EPQ-SPED 152 (417)
T ss_dssp EEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHCH-CSH-STTH
T ss_pred ccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccccccc-ccc-cCCC
Confidence 9999999999999999999999997 222222221 1 1 1124444422211 111110000 000 00 1
Q ss_pred CCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhh--ccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEec
Q 008895 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSF--ASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ 266 (549)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~ 266 (549)
.++++++++|||||||.||+|.++|+++.+.+.... ... ... +++++.+|++|.+|+ ...+.++..|+++++.+
T Consensus 153 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (417)
T PF00501_consen 153 SPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYF-GLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPS 229 (417)
T ss_dssp TTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTT-TTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEES
T ss_pred CccceeEeecccccccccccccccccccccccccccccccc-ccC--ceEEeeccccccccccccccccccccccccccc
Confidence 568999999999999999999999999999877754 222 222 599999999999999 88999999999999998
Q ss_pred CcC---HHHHHHHHHHhceeeeeecHHHHHHHHhCCCCC----CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 267 RFD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD----GYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 267 ~~~---~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~----~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
... ++.+++.++++++|+++++|+++..+++..... ...++++|.++++|+++++++.+++++.++...+.+.
T Consensus 230 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~ 309 (417)
T PF00501_consen 230 PFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINL 309 (417)
T ss_dssp SHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEE
T ss_pred cccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceec
Confidence 654 477899999999999999999999998832222 3568889999999999999999999999965699999
Q ss_pred cCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCe
Q 008895 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGW 419 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 419 (549)
||+||++.+++...........+++|.|+++++++|+|+++++++++|+.|||+|+|++++.||+++++.+...|..+||
T Consensus 310 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~ 389 (417)
T PF00501_consen 310 YGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGW 389 (417)
T ss_dssp EEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSE
T ss_pred ccccccceeeecccccccccccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccccccc
Confidence 99999999887543233334667899999999999999888999999999999999999999999999999999976689
Q ss_pred eecCceEEEecCCeEEEEcccCCeeeeC
Q 008895 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYK 447 (549)
Q Consensus 420 ~~TGD~~~~~~~g~~~~~GR~~d~i~~~ 447 (549)
|+|||+|++|++|++++.||.||+||++
T Consensus 390 ~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 390 YRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred eecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 9999999999999999999999999974
No 117
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1e-54 Score=417.13 Aligned_cols=491 Identities=22% Similarity=0.290 Sum_probs=405.6
Q ss_pred CCCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
..++.+.|.++++++ |+++|+++.+..+.+||+|+.++++++|+.|.. .|++.||.|+++|+|.++++..+||++
T Consensus 76 ~~ti~~~F~~~vrr~----p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~-~~l~~GD~VAL~men~pefv~lWlGLa 150 (649)
T KOG1179|consen 76 RRTIAELFLSQVRRQ----PDKPAIIYEGPFQSLTFAELDARSNRVANYLHA-EGLKAGDVVALLMENRPEFVALWLGLA 150 (649)
T ss_pred CCcHHHHHHHHHHhC----CCccEEEEeCCCceeeHHHHHHHHHHHHHHHHH-hhcccCCEEEEecCCChhHHHHHHhHH
Confidence 479999999999999 999999998667899999999999999999999 899999999999999999999999999
Q ss_pred HcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC-------CCeEEEecCC----chhhhhcccCCCcc--
Q 008895 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KHRTILIDSP----EFDSMTMSWNSKHE-- 183 (549)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~-- 183 (549)
++|++...||++...+.|.|.+..++++.+|++.+....+.+. +......+.. ..+++.........
T Consensus 151 KlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~ 230 (649)
T KOG1179|consen 151 KLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHP 230 (649)
T ss_pred hhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCC
Confidence 9999999999999999999999999999999999887665543 2222222211 13333222111111
Q ss_pred ---ccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhc
Q 008895 184 ---LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALM 259 (549)
Q Consensus 184 ---~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g 259 (549)
......+-.++++.+|||||||.||+.+++|.............+ ++..+|+++..+|++|.++. ..+..++..|
T Consensus 231 vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~G 309 (649)
T KOG1179|consen 231 VPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-GMTADDVVYTTLPLYHSAAGILGIGGCLLHG 309 (649)
T ss_pred CCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEcchhHHHHHHHHHHHHHHhcC
Confidence 112233456789999999999999999999999988777666666 68999999999999999888 7788999999
Q ss_pred cEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcc
Q 008895 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (549)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~ 339 (549)
+++++-.+|+...+|+.+.++++|++...--+.+-|++.+.....+-+++|..+ |..+.+++++.|.+.|+..++.+.
T Consensus 310 aT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~ 387 (649)
T KOG1179|consen 310 ATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEF 387 (649)
T ss_pred ceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEE
Confidence 999999999999999999999999999999999999998877666677888776 888999999999999977789999
Q ss_pred cCccccccceecccCcCCCCCCCcccc------ccCCcEEEEEcCCCCC----------cCCCCCcceEEEe--cCCc--
Q 008895 340 YGLTESTAGVFRTVGPDECRRWGSTGR------LSAGLEAKIVDPETGD----------SLPPGKEGELSIR--GPTI-- 399 (549)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~------~~~~~~~~i~d~~~~~----------~~~~g~~Gel~v~--g~~~-- 399 (549)
||+||......+..+ +.|.+|. -+--+++--+|+++++ +|++|+.|.++-+ ....
T Consensus 388 YgaTEgn~~~~N~d~-----~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~ 462 (649)
T KOG1179|consen 388 YGATEGNSNLVNYDG-----RVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLR 462 (649)
T ss_pred eccccCcceeeeecC-----ccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchh
Confidence 999998765554321 2233322 1111233334556653 6788999977432 3333
Q ss_pred -ccccCCCccccccccCC------CCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEE
Q 008895 400 -MKGYVGEPEVTSATLLP------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVI 472 (549)
Q Consensus 400 -~~gy~~~~~~~~~~~~~------~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv 472 (549)
+.||.++.+.+...... |-||.|||+-.+|+.|++|+.+|.-|.+...|+||+..|||.+|....+++|+.|+
T Consensus 463 ~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VY 542 (649)
T KOG1179|consen 463 SFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVY 542 (649)
T ss_pred hhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEE
Confidence 88999977777666432 34999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCc-eeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 473 PYPDEEAGQ-MPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 473 ~~~~~~~~~-~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
|+.-+..+. .=.|.|+.++....+.+.+-.++++.||+|.+|.++.+.++|++|.+-|..+..|.+.-
T Consensus 543 GV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~eg 611 (649)
T KOG1179|consen 543 GVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKEG 611 (649)
T ss_pred EEecCCccCccceEEEEecCcccchHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHcc
Confidence 998765543 33466667887888999999999999999999999999999999999999999998765
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.4e-53 Score=435.12 Aligned_cols=394 Identities=27% Similarity=0.354 Sum_probs=334.8
Q ss_pred cHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 008895 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (549)
Q Consensus 71 Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (549)
||.||.+.++++|+.|.+..|+++||+|+++++|+++++++++||+++|++++|+++..+.+.+..+++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 89999999999999999757999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCC
Q 008895 151 SVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (549)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~ 230 (549)
.....+.......+.+...... ...... ...........+++++++|||||||.||+|.++|+++..........+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~-~ 157 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPLELA-ALDDAP-APPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRY-G 157 (408)
T ss_pred chhhhccccCCceEEechhhhh-hccccc-ccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhc-C
Confidence 8777665443333333221111 111100 001111113468899999999999999999999999998888877766 4
Q ss_pred CCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecCcC---HHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCC
Q 008895 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS 307 (549)
Q Consensus 231 ~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~~~---~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~ 307 (549)
....+++++..|++|.+++...+.++..|+++++.+... +..+.+.++++++|.+.++|.++..+.+... ..++
T Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~~~~ 234 (408)
T TIGR01733 158 LDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---PALA 234 (408)
T ss_pred CCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---hccc
Confidence 667899999999999999998999999999999887543 5889999999999999999999999988764 4578
Q ss_pred CceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccceecccCc-CCCC--CCCccccccCCcEEEEEcCCCCCcC
Q 008895 308 SLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP-DECR--RWGSTGRLSAGLEAKIVDPETGDSL 384 (549)
Q Consensus 308 ~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~-~~~~--~~~~~G~~~~~~~~~i~d~~~~~~~ 384 (549)
++|.+++||+++++++++.+.+.++++.+.+.||+||++.++...... .... ...++|.|+++++++|+|++ ++.+
T Consensus 235 ~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~-~~~~ 313 (408)
T TIGR01733 235 SLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDD-LRPV 313 (408)
T ss_pred CceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCC-CCCC
Confidence 999999999999999999999999668999999999998876532211 1111 26789999999999999965 8999
Q ss_pred CCCCcceEEEecCCcccccCCCccccccccCCC------C--eeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHH
Q 008895 385 PPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD------G--WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAEL 456 (549)
Q Consensus 385 ~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~------~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~I 456 (549)
+.|+.|||+++|++++.||+++++.+...|..+ + ||+|||+|++|++|.+++.||.+|+++.+|++++|.+|
T Consensus 314 ~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~i 393 (408)
T TIGR01733 314 PVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEI 393 (408)
T ss_pred CCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHH
Confidence 999999999999999999999999888777543 2 99999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcceEEE
Q 008895 457 EHLLLSHREVADAAV 471 (549)
Q Consensus 457 E~~l~~~~~v~~~~v 471 (549)
|++|..++.|.+++|
T Consensus 394 e~~l~~~~~v~~~~v 408 (408)
T TIGR01733 394 EAALLRHPGVREAVV 408 (408)
T ss_pred HHHHhcCcchhhhcC
Confidence 999999999998865
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-49 Score=398.00 Aligned_cols=322 Identities=29% Similarity=0.436 Sum_probs=281.1
Q ss_pred ccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEe--
Q 008895 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-- 265 (549)
Q Consensus 188 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~-- 265 (549)
...++++++++|||||||.||+|.++|+++..........+ ...++++..+|++|.+++...+.++..|++.+..
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL---GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc---CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCc
Confidence 34568999999999999999999999999988887665544 3456888999999999998788888899988873
Q ss_pred -cCcCHHHHHHHHHHhc--eeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCc
Q 008895 266 -QRFDLKMMLKAVEEFR--VTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (549)
Q Consensus 266 -~~~~~~~~~~~l~~~~--~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~ 342 (549)
..+++..+++.+++++ .++...+|..+..++.... ....+.++|.+++||+++++++.+++.+. ++++++.||+
T Consensus 108 ~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~ 184 (358)
T PRK07824 108 SAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGM 184 (358)
T ss_pred CCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccC
Confidence 3578999999999998 5666778888877766443 22457899999999999999999998864 7899999999
Q ss_pred cccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeec
Q 008895 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRT 422 (549)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~T 422 (549)
||++..+. ..|.|++++++++.+ |||+++|+.++.||+++++.+ .|..+|||+|
T Consensus 185 TE~~~~~~------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~T 238 (358)
T PRK07824 185 SETSGGCV------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRT 238 (358)
T ss_pred CccCCCcC------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcccc--cccCCCceec
Confidence 99875322 358899999999854 999999999999999988753 3556789999
Q ss_pred CceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHH
Q 008895 423 GDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIME 502 (549)
Q Consensus 423 GD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~ 502 (549)
||+|++ ++|.+++.||.||+||++|++|+|.+||++|.++|+|.+|+|++.++...++.++++++.......+.++|++
T Consensus 239 GDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i~~ 317 (358)
T PRK07824 239 DDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEALRA 317 (358)
T ss_pred ccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHHHH
Confidence 999999 8999999999999999999999999999999999999999999999888889999999877666678899999
Q ss_pred HHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCc
Q 008895 503 FVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVP 542 (549)
Q Consensus 503 ~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~ 542 (549)
++++.|+.+++|..|+++++||+|++||++|++|++++.+
T Consensus 318 ~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 318 HVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred HHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 9999999999999999999999999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=4.6e-45 Score=404.87 Aligned_cols=455 Identities=17% Similarity=0.141 Sum_probs=337.7
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEEC---CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINS---VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~---~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la 114 (549)
.|+.+++.+.++++ |+++|+... ...+.+||+|+.++++++|.+|.+ +|+++||+|+|+++|+++|+++++|
T Consensus 427 ~Tl~dll~~~a~~~----pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-lGV~~GDrVaIls~N~~Ewvia~lA 501 (1452)
T PTZ00297 427 RSLGEMWERSVTRH----STFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-LGVRPGDVIGVDCEASRNIVILEVA 501 (1452)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 68999999999999 999998631 122689999999999999999999 9999999999999999999999999
Q ss_pred HHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcC---CC-eEEEecCC-----------------chhh
Q 008895 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---KH-RTILIDSP-----------------EFDS 173 (549)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~-~~~~~~~~-----------------~~~~ 173 (549)
|+.+|+++||+.+ +.+++.+++++++++++|++......+.+. .+ .++.++.. .|++
T Consensus 502 ~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ 579 (1452)
T PTZ00297 502 CALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEF 579 (1452)
T ss_pred HHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHH
Confidence 9999999999975 467899999999999999998777665432 22 24444321 1333
Q ss_pred hhcccCCCccccccccCCCCEEEEEc---cCCCCCccchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHH
Q 008895 174 MTMSWNSKHELDRAKVCQSDVAAIMY---SSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYG 248 (549)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~a~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g 248 (549)
+................+++++.|+| ||||||.||||++||+++++++....... +...+.|++++.+|++|+++
T Consensus 580 ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~e 659 (1452)
T PTZ00297 580 VEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFN 659 (1452)
T ss_pred HHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHH
Confidence 33322111111122346788998885 99999999999999999999988765432 23456799999999999999
Q ss_pred HHHHHHHhhhccEEEEecCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCC-------------------------C
Q 008895 249 LFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD-------------------------G 303 (549)
Q Consensus 249 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~-------------------------~ 303 (549)
....+.++..|+++.. +++..+++.|++++||+++++|.++..+.+....+ +
T Consensus 660 r~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g 736 (1452)
T PTZ00297 660 RVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIH 736 (1452)
T ss_pred HHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC
Confidence 8777888899988864 47899999999999999999999987664322100 0
Q ss_pred CC----------------C-CCceEEEEecC--CCCHHHHHHHHHhCCCCcEEcccCccccccceecccCcCCCCCCCcc
Q 008895 304 YD----------------L-SSLETVACGAA--PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGST 364 (549)
Q Consensus 304 ~~----------------l-~~lr~v~~~Ge--~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 364 (549)
.. + .++|.+++||. +++..+. . ++.+...||+||+. ... . ..... ..
T Consensus 737 ~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~-----~--~i~i~~g~glTE~~--~~~--~-~~~~~--~~ 802 (1452)
T PTZ00297 737 RRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL-----E--HISVCYVPCLREVF--FLP--S-EGVFC--VD 802 (1452)
T ss_pred CCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----C--CceEEEecceEEee--eec--C-CCCcc--cC
Confidence 00 0 36888888873 5553332 2 46788899999943 111 1 11112 23
Q ss_pred ccccCCcEEEEEcC-CCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEcccCCe
Q 008895 365 GRLSAGLEAKIVDP-ETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDL 443 (549)
Q Consensus 365 G~~~~~~~~~i~d~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ 443 (549)
|.|+|+++++|.+. +.+. .+..|||+++ |+++|+.|.+.+ +||+ +||+++|+||+||+
T Consensus 803 G~PlpgvEvKI~~~~E~~~---~~~~GEIlvr-------~~kdpe~T~e~~--~gW~---------~dG~L~IidRkKdl 861 (1452)
T PTZ00297 803 GTPAPSLQVDLEPFDEPSD---GAGIGQLVLA-------KKGEPRRTLPIA--AQWK---------RDRTLRLLGPPLGI 861 (1452)
T ss_pred CeecCceEEEEcccccccC---CCCCCeEEEE-------ECCChHHHHHhh--CcCc---------cCCeEEEEeccccc
Confidence 99999999999873 3222 1236999995 457888887642 5664 69999999999999
Q ss_pred eee-CcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCC-------------------CCHHH----
Q 008895 444 IKY-KGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSS-------------------LNEAE---- 499 (549)
Q Consensus 444 i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~-------------------~~~~~---- 499 (549)
||. +|++|.|..||+++.++|.|.+++|++.+.. .++|+|++....- .+.++
T Consensus 862 ikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k----~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~ 937 (1452)
T PTZ00297 862 LLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR----PIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAY 937 (1452)
T ss_pred eECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC----ceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHh
Confidence 999 9999999999999999999999999975432 3788888753110 12222
Q ss_pred ----HHHHH---H--hcCCCCCcccEEEEe-Ccc-----CCCCCCcccHHHHHcccC
Q 008895 500 ----IMEFV---A--RQVSPYKKIRRVAFI-NAI-----PKSAAGKILRMELRKVAV 541 (549)
Q Consensus 500 ----i~~~l---~--~~l~~~~~p~~i~~v-~~l-----P~t~~GKv~r~~l~~~~~ 541 (549)
+.+.+ . .++..+.+++.+.++ +++ -+||+.|+.|+.+.+.|.
T Consensus 938 ~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~ 994 (1452)
T PTZ00297 938 ASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFS 994 (1452)
T ss_pred HHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHH
Confidence 33332 1 125667788766665 455 469999999999988774
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-42 Score=374.07 Aligned_cols=410 Identities=22% Similarity=0.275 Sum_probs=342.7
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~ 117 (549)
.++.+.|...+... |+++|+... +..+||.+|..+++++|+.|.+ .|+.++++|+++++.+.+++++++|+++
T Consensus 227 ~~i~~~f~~~a~~~----p~~~a~~~~--~~~lty~el~~~a~~la~~l~~-~g~~~~~~V~i~~~rs~~~i~~~l~ilk 299 (642)
T COG1020 227 LTIHLLFEEQAATT----PDAVALVRG--GQQLTYAELDARANRLARLLIS-LGVGPGETVAILADRSLELVVALLAVLK 299 (642)
T ss_pred chHHHHHHHHHHhC----CCceeEecC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCCHHHHHHHHHHHh
Confidence 57999999999999 999999887 7899999999999999999998 8999999999999889999999999999
Q ss_pred cCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCccccccccCCCCEEEE
Q 008895 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (549)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (549)
+|+.++|++|.++.+++..+++..++..+++............. +.++..... .. ...+......+++.+|+
T Consensus 300 aG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~-~~~~~~~~~~~~~~ayi 371 (642)
T COG1020 300 AGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG--LALDDALSE-----IP-DTDPIPQALLGDALAYI 371 (642)
T ss_pred cCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc--ccccccccc-----CC-ccCcccccCCCCCeEEE
Confidence 99999999999999999999999999999998443221111111 111111110 00 00111223455889999
Q ss_pred EccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC---cCHHHHH
Q 008895 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMML 274 (549)
Q Consensus 198 ~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~---~~~~~~~ 274 (549)
+|||||||.||||..+|+++.+...+....+ .....|+++...++.+....+..+.++..|+.++.... .++..+.
T Consensus 372 iytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~ 450 (642)
T COG1020 372 IYTSGSTGQPKGVRIEHRALANLLNDAGARF-GLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALL 450 (642)
T ss_pred EEccCCCCCCCCceecCHHHHHHHHHHHHhc-CCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHH
Confidence 9999999999999999999999777776665 56777899988888777788899999999999999864 6889999
Q ss_pred HHHHHhceeeeeecHHHHHHHHhCCCCC--CCCCCCceEEEEecCCCCHHHHHHHHHhCC-CCcEEcccCccccccceec
Q 008895 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTD--GYDLSSLETVACGAAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFR 351 (549)
Q Consensus 275 ~~l~~~~~t~l~~~P~~l~~l~~~~~~~--~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~ 351 (549)
+.+.++++|.+..+|.++..++...... ......+|.+++||+.++.++...+....+ ...+.+.||+||+......
T Consensus 451 ~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~ 530 (642)
T COG1020 451 ELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPS 530 (642)
T ss_pred HHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheee
Confidence 9999999999999999999888763221 122345999999999999999999988764 4689999999996655443
Q ss_pred ccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecC
Q 008895 352 TVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDED 431 (549)
Q Consensus 352 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 431 (549)
............+|+|++|.+++|+| +.+++++.|..||+++.|.+++.||+++++.+...|..+.+|+|||++++..+
T Consensus 531 ~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~d 609 (642)
T COG1020 531 FPISAELESRVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLAD 609 (642)
T ss_pred EEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCC
Confidence 32222221146899999999999999 88999999999999999999999999999999999976569999999999999
Q ss_pred CeEEEEcccCCeeeeCcEeeChHHHHHHHHcCC
Q 008895 432 GFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHR 464 (549)
Q Consensus 432 g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~ 464 (549)
|.+.+.||.|+++|++|++|.+.+||..+.++|
T Consensus 610 g~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 610 GALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred CeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 999999999999999999999999999998765
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=3.9e-40 Score=327.18 Aligned_cols=288 Identities=22% Similarity=0.240 Sum_probs=231.7
Q ss_pred CCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCC-CCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEecCcC
Q 008895 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFD 269 (549)
Q Consensus 192 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~~~~ 269 (549)
+..++++|||||||.||+|.++|+++.+........+.. ....+++++.+|++|.+|+ +..+.++..|++++....++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 558899999999999999999999998877766555521 1334689999999999987 56678888999999988888
Q ss_pred HHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccce
Q 008895 270 LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGV 349 (549)
Q Consensus 270 ~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~ 349 (549)
+..+++.++.. |+++++|+++..+.+.. ..+++++. ++||+++++++++.+.+. +...+++.||+||++.++
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~ 246 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIG 246 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccc
Confidence 88888887643 88999999999987643 34667775 688999999999999886 334689999999998754
Q ss_pred ecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEe
Q 008895 350 FRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID 429 (549)
Q Consensus 350 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~ 429 (549)
... ..+..|++.|+.++.+ + ++. + .| +..|++|||++++|
T Consensus 247 ~~~-------~~~~~~~~~p~~~~~~-~--~~~--------~---~g-------------------~~~~~~tgD~g~~d 286 (386)
T TIGR02372 247 LRE-------APDDPFRLLPDLACFA-D--TLS--------S---AG-------------------LARRLDLQDRLAWD 286 (386)
T ss_pred ccc-------CCCCCcccCCCccccC-C--Ccc--------C---CC-------------------ccceeecCceEEEc
Confidence 431 1224567777766543 1 110 0 01 12368999999999
Q ss_pred cCCeEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCC--HHHHHHHHHhc
Q 008895 430 EDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLN--EAEIMEFVARQ 507 (549)
Q Consensus 430 ~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~--~~~i~~~l~~~ 507 (549)
++|++++.||+||+||++|++|+|.+||++|.++|+|.+++|+. .++.+.++|++.+....+ .+++.++++++
T Consensus 287 ~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~~~~~l~~~~~~~ 361 (386)
T TIGR02372 287 KDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAELEIELRATAARH 361 (386)
T ss_pred CCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998862 356888999887543332 46899999999
Q ss_pred CCCCCcccEEEEeCccCCCCCCccc
Q 008895 508 VSPYKKIRRVAFINAIPKSAAGKIL 532 (549)
Q Consensus 508 l~~~~~p~~i~~v~~lP~t~~GKv~ 532 (549)
|+.|++|..+.++++||+|++||++
T Consensus 362 L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 362 LPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred CCCCCCCcEEEEcccCCCCCCCCcC
Confidence 9999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=9.3e-38 Score=318.32 Aligned_cols=322 Identities=24% Similarity=0.280 Sum_probs=238.9
Q ss_pred CCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHh---hccCCCCCCCcEEEEecChhhH-HHHHHHHHHhhhccEEEEe
Q 008895 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS---FASSPKRVSPAVMLFTMPYFHI-YGLFFCFRAAALMETAVVM 265 (549)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~---~~~~~~~~~~~~~~~~~pl~~~-~g~~~~~~~l~~g~~~~~~ 265 (549)
..++.+++++||||||.||++.++|.++..+.... ...+ +..++|++++..+..+. .++...+.+...|++++..
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~-g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAA-GGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHc-CCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 34578889999999999999999999987654332 2223 45677888776554332 2333455677789999888
Q ss_pred cCcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCC--CCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCcc
Q 008895 266 QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYD--LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLT 343 (549)
Q Consensus 266 ~~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~--l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~t 343 (549)
...+++.+++.|+++++|+++++|+++..|++.....+.+ ..++|.++++||++++++++.+.+.| ++.+++.||+|
T Consensus 152 ~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~t 230 (422)
T TIGR02155 152 SGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLS 230 (422)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccch
Confidence 7777899999999999999999999999888654333322 35899999999999999999999999 78999999999
Q ss_pred cccc-ceecccCcCCCCCCCcccccc--CCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCee
Q 008895 344 ESTA-GVFRTVGPDECRRWGSTGRLS--AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (549)
Q Consensus 344 E~~~-~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~ 420 (549)
|++. ..... ... .. .|.++ ++..++|+|+++++++++|+.|||++++.. ...+ +.+||
T Consensus 231 E~~~~~~~~~-~~~--~~---~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~------------~~~~-p~~ry 291 (422)
T TIGR02155 231 EVIGPGVAME-CVE--TQ---DGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLT------------KEAL-PVIRY 291 (422)
T ss_pred hhcCCceeec-ccc--cC---CCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCC------------cccc-ceeeE
Confidence 9852 22211 100 01 12223 356788999889999999999999998742 2233 56899
Q ss_pred ecCceEEEecC-C-----eEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCC
Q 008895 421 RTGDLCYIDED-G-----FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSS 494 (549)
Q Consensus 421 ~TGD~~~~~~~-g-----~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~ 494 (549)
+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|+|...+.+........+.+.++|+..++..
T Consensus 292 ~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~ 371 (422)
T TIGR02155 292 RTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESY 371 (422)
T ss_pred EcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcc
Confidence 99999999876 4 46899999999999999999999999999999998444444444444456677766654321
Q ss_pred -CC--------HHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHH
Q 008895 495 -LN--------EAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRM 534 (549)
Q Consensus 495 -~~--------~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~ 534 (549)
.. .++|.+++++.+..+.. ..++.+++||+|+ ||++|.
T Consensus 372 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 372 TLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred cccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 11 35678888887776632 1233347999988 999874
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=2.2e-32 Score=279.46 Aligned_cols=498 Identities=17% Similarity=0.247 Sum_probs=355.8
Q ss_pred CCHHHHHhhcccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHH
Q 008895 38 ISAVDYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (549)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~l 113 (549)
.++.+++..+++++ |+.+|+..- .+..++||.+|.++|.+++.+|+.+..+++||+|++++++++|++++++
T Consensus 770 ~~ile~Lq~R~a~t----p~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~ 845 (1363)
T KOG3628|consen 770 LTILEILQWRAAKT----PDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIY 845 (1363)
T ss_pred HHHHHHHHHHhhcC----CCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHH
Confidence 68999999999999 999999753 3357999999999999999999997889999999999999999999999
Q ss_pred HHHHcCCeEccCCCC------CCHHHHHHHHhhcCCeEEEEcCccHHHHhcC------C--CeEEEecCCchhhhhcc-c
Q 008895 114 SLLSLGVIISPANPV------NTESEISRQIQLSNPVIAFATSSVVHKLAKL------K--HRTILIDSPEFDSMTMS-W 178 (549)
Q Consensus 114 a~~~~G~~~v~l~~~------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~-~ 178 (549)
||+.+|.+++|+.|- .+...+..+++..++..|+++......+... + .....++.+++..-... .
T Consensus 846 ~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~k~~ 925 (1363)
T KOG3628|consen 846 ACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIRKRK 925 (1363)
T ss_pred HHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhhhhh
Confidence 999999999999873 4577889999999999999998776655421 1 00111111111110000 0
Q ss_pred ----CCCccccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHHHHHHH
Q 008895 179 ----NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFR 254 (549)
Q Consensus 179 ----~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~ 254 (549)
.......+....++.+|++-+.--++|.--++.++|..+++.+....+......+...+.+..|...+..+.+++.
T Consensus 926 ~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcLl 1005 (1363)
T KOG3628|consen 926 KNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCLL 1005 (1363)
T ss_pred hhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHHHH
Confidence 0011112233456889999998889999999999999999999999888865566666666555555444488899
Q ss_pred HhhhccEEEEecC----cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCC------ceEEEEecCCCCHHHH
Q 008895 255 AAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSS------LETVACGAAPLGKDTI 324 (549)
Q Consensus 255 ~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~------lr~v~~~Ge~l~~~~~ 324 (549)
..+.|.+..++.+ .++..|++.|+++++.-++.+-..+..+.+....+...++. .-.++..-+.....+.
T Consensus 1006 gVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali 1085 (1363)
T KOG3628|consen 1006 GVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIALI 1085 (1363)
T ss_pred HHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHHH
Confidence 9999999888765 47899999999999998888877777776654433222211 1233344455566777
Q ss_pred HHHHHhCCCCc-----EEcccCc-------------cccccceecc------------cCcCCCCCCCccccccCCcEEE
Q 008895 325 MAFASKFPKVV-----LVQAYGL-------------TESTAGVFRT------------VGPDECRRWGSTGRLSAGLEAK 374 (549)
Q Consensus 325 ~~~~~~~~~~~-----l~~~yG~-------------tE~~~~~~~~------------~~~~~~~~~~~~G~~~~~~~~~ 374 (549)
..+.+.|...- +-..|++ .|-.....-. .+..........|...+++++.
T Consensus 1086 ~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~ 1165 (1363)
T KOG3628|consen 1086 ASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIA 1165 (1363)
T ss_pred HHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeE
Confidence 77776662111 1122222 2211100000 0000111122448888999999
Q ss_pred EEcCCCCCcCCCCCcceEEEecCCcccccCCCcccc-ccccC---------CCCeeecCceEEEec------C----CeE
Q 008895 375 IVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVT-SATLL---------PDGWMRTGDLCYIDE------D----GFL 434 (549)
Q Consensus 375 i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~-~~~~~---------~~~~~~TGD~~~~~~------~----g~~ 434 (549)
|++||+..+|.+|+.||||+.|.+-+.+|++..+.. ...|. ...|-||||+|++.. + .-+
T Consensus 1166 IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~L 1245 (1363)
T KOG3628|consen 1166 IVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLL 1245 (1363)
T ss_pred EeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeE
Confidence 999999999999999999999998888877542221 11111 235999999999842 2 359
Q ss_pred EEEcccCCeeeeCcEeeChHHHHHHHH-cCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHH-HhcCCCCC
Q 008895 435 FIVDRLKDLIKYKGYQVAPAELEHLLL-SHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFV-ARQVSPYK 512 (549)
Q Consensus 435 ~~~GR~~d~i~~~G~~v~~~~IE~~l~-~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l-~~~l~~~~ 512 (549)
|++|-.++.+.++|.+.+|.+||..+. .||.|.+|+|+ .++..++..+.... +....+|.-.+ ...|.++.
T Consensus 1246 yVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF-----~~~glvVvviE~~g--q~~~~~LvPlIv~~vL~eH~ 1318 (1363)
T KOG3628|consen 1246 YVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVF-----QATGLVVVVIECHG--QQELADLVPLIVNVVLEEHY 1318 (1363)
T ss_pred EEeecccceeeecCcccCcchHHHHHHHhcccccceeeE-----eeCCeEEEEEEecC--chhHhhhhHHHHHHHHhhcc
Confidence 999999999999999999999998775 68999999999 34456666666654 33333443333 44566666
Q ss_pred ccc-EEEEe--CccCCCCCCcccHHHHHcccCcCCCC
Q 008895 513 KIR-RVAFI--NAIPKSAAGKILRMELRKVAVPSGSS 546 (549)
Q Consensus 513 ~p~-~i~~v--~~lP~t~~GKv~r~~l~~~~~~~~~~ 546 (549)
++. .+.|| ..+|+++.|..+|..+++.+..+.++
T Consensus 1319 iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~ 1355 (1363)
T KOG3628|consen 1319 IILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLD 1355 (1363)
T ss_pred eEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccc
Confidence 655 66666 56999999999999999999998875
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.6e-33 Score=291.47 Aligned_cols=484 Identities=18% Similarity=0.177 Sum_probs=320.4
Q ss_pred CHHHHHhhcccCCCCCCCCCcEEEE----CCC--CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHH
Q 008895 39 SAVDYVSSLRATLPWRDDDTVALIN----SVT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (549)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~a~~~----~~~--~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~ 112 (549)
++...+.+.+.+. |...+..+ ... -..+||.+.....+.+++.|.. .|...|+.|++++..+.++++..
T Consensus 37 ~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~-~~~~~~~~v~i~~~~~~d~~v~v 111 (1032)
T KOG1178|consen 37 TLEDSFRRELAEA----PENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVS-LGSLRGTTVAIYMLPSVDLVVSV 111 (1032)
T ss_pred chhhHHHHHHhhc----ccCCCceEeecccccccccchhhhhhhcccchhHHHhhh-cccccCceEEEeccCcCCeeeee
Confidence 3444555666666 55555432 111 2589999999999999999999 89999999999999999999999
Q ss_pred HHHHHcCCeEccCCCCCC----HHHHHHHHhh-cCCeEEEEcCccHHHHh--cC--CCeEEEecCCchhhhhcccCCCcc
Q 008895 113 FSLLSLGVIISPANPVNT----ESEISRQIQL-SNPVIAFATSSVVHKLA--KL--KHRTILIDSPEFDSMTMSWNSKHE 183 (549)
Q Consensus 113 la~~~~G~~~v~l~~~~~----~~~l~~~l~~-~~~~~ii~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~ 183 (549)
++++++|..+++++|.++ .+.+..+... .....-+........+. +. +..+... ...+..+. .....
T Consensus 112 ~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~-~~~f~~~~---~~~~~ 187 (1032)
T KOG1178|consen 112 FAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETI-ADSFQMVL---HNEDT 187 (1032)
T ss_pred eehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhc-cchhhhhh---ccCCC
Confidence 999999999999999998 3322111110 00111111111111110 00 0001111 11111111 11111
Q ss_pred ccccccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecCh-hhHHHHHHHHHHhhhccEE
Q 008895 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY-FHIYGLFFCFRAAALMETA 262 (549)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl-~~~~g~~~~~~~l~~g~~~ 262 (549)
.......++..+.+.||||+||.||+|..+|..+.....+....++ ...++.+-..... ++..-.......+..|..+
T Consensus 188 r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~-~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l 266 (1032)
T KOG1178|consen 188 REIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFP-PTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNL 266 (1032)
T ss_pred cceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCC-cCccchhhhhheeecccchHHHHhhHhhcCcee
Confidence 1222456677899999999999999999999999999998888874 4444443222222 1211112333444455555
Q ss_pred EEecCc---CHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCC-------------CCCCCCceEEEEecCCCCHHHHHH
Q 008895 263 VVMQRF---DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD-------------GYDLSSLETVACGAAPLGKDTIMA 326 (549)
Q Consensus 263 ~~~~~~---~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~-------------~~~l~~lr~v~~~Ge~l~~~~~~~ 326 (549)
..+... .+..+.+.++++.++..+.+|++.+.++...... ....+.|+.+..+||+...++...
T Consensus 267 ~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s 346 (1032)
T KOG1178|consen 267 LVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTS 346 (1032)
T ss_pred ecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhh
Confidence 555432 3689999999999999999999987776654321 111347899999999999999987
Q ss_pred HHHhCCCCcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcC---------------CCCCcCCCCCcce
Q 008895 327 FASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDP---------------ETGDSLPPGKEGE 391 (549)
Q Consensus 327 ~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~---------------~~~~~~~~g~~Ge 391 (549)
+...+...-...-|++++........... ..+..+....++.++. ..+.+.+.++.+.
T Consensus 347 ~~~~~~~~~~~~~y~s~~~~~~~s~~~~~-------~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 419 (1032)
T KOG1178|consen 347 TFDLLAEIFFGLPYLSTDPTGLVSYDDFS-------PSKVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGVGKG 419 (1032)
T ss_pred hhhcccceeeeecccCCCCccceeHHhhC-------cccceecceeEEeccchhhccCCCcceeeeeccCcccCCcccce
Confidence 76666433344458888765544432111 1111111122222210 2223333222222
Q ss_pred EE----EecCCcccccCCCccccccccC-----CCCeeecCceEEEecCCeEEEEcccCCeeeeCcEeeChHHHHHHHHc
Q 008895 392 LS----IRGPTIMKGYVGEPEVTSATLL-----PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVAPAELEHLLLS 462 (549)
Q Consensus 392 l~----v~g~~~~~gy~~~~~~~~~~~~-----~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~ 462 (549)
.. -.+..+..| ++.++.....+. .+..|+|||.|+..++|.+.+.||.|++||++|.++.+.+|+.++..
T Consensus 420 ~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~ 498 (1032)
T KOG1178|consen 420 CLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEV 498 (1032)
T ss_pred eecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhcc
Confidence 22 223344444 222333222211 23479999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEeecCCCCCceeEEEEEeCCCCC-CCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHccc
Q 008895 463 HREVADAAVIPYPDEEAGQMPMAFVVRQPHSS-LNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVA 540 (549)
Q Consensus 463 ~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~-~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~ 540 (549)
+|.|.++++....+...++.+++||+...... .....|+.++.++|+.|++|..++.++++|+|++||||+++|.+..
T Consensus 499 ~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~~~ 577 (1032)
T KOG1178|consen 499 HPDVKEAITLARENSTVGQTLLAFVVERGGSKSVLIRDIRNYLKKELASYMLPSLVVPLAKVPLNPNGKVDKKALLEYN 577 (1032)
T ss_pred CcchhhhheeeeeccccCceEEEEEeccCCCCchhHHHHHHhhcccccceecceEEEEhhhCCcCCCCCcChhhhhhhh
Confidence 99999999999998888999999999876543 3457899999999999999999999999999999999999999844
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.98 E-value=3.4e-30 Score=262.74 Aligned_cols=325 Identities=15% Similarity=0.132 Sum_probs=222.2
Q ss_pred CCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEEEEec
Q 008895 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ 266 (549)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~~~~~ 266 (549)
..++++.+.+||||||.||++.+||.++..........+ .+..++|+++...+..+..+. ...+.+...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 456788999999999999999999999876654433222 246778888888887765555 34455677888776544
Q ss_pred CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCC--CCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccc
Q 008895 267 RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGY--DLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTE 344 (549)
Q Consensus 267 ~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~--~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE 344 (549)
. ....++.|++++++.+.++|+.+..+++.....+. ...++|.+++|||++++++++.+.+.| ++.+++.||+||
T Consensus 164 ~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~TE 240 (445)
T TIGR03335 164 K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGSTE 240 (445)
T ss_pred c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChhh
Confidence 3 34668999999999999999988777764433322 246899999999999999999999998 799999999999
Q ss_pred cccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCc
Q 008895 345 STAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGD 424 (549)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD 424 (549)
++.. ..+.. ......+.+.+.++|+|++++.++++|+.|||++++..... ..... +--.|+|||
T Consensus 241 ~~~~-~~c~~------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~------~r~~~---PliRYrtgD 304 (445)
T TIGR03335 241 GTMC-GECQA------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPG------ERCGS---LLINYDTED 304 (445)
T ss_pred hhhe-EEecC------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCC------ccCCc---eEEEeecCc
Confidence 8632 22111 11122233567899999988899999999999998754210 00001 223499999
Q ss_pred eEEEec-C----C----eEEEEcccCCeeeeCcEeeChHHHHHHHHcC---CCcc-eEEEEeecCCCCCceeEEEEEeCC
Q 008895 425 LCYIDE-D----G----FLFIVDRLKDLIKYKGYQVAPAELEHLLLSH---REVA-DAAVIPYPDEEAGQMPMAFVVRQP 491 (549)
Q Consensus 425 ~~~~~~-~----g----~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~---~~v~-~~~vv~~~~~~~~~~~~~~v~~~~ 491 (549)
++++.. + | .+...||.||+++++|.+|+|.+||++|.++ +++. +..++...+....+.+.+.+...+
T Consensus 305 ~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~~~ 384 (445)
T TIGR03335 305 TTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRVSLECED 384 (445)
T ss_pred eEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEEEEEecC
Confidence 999732 2 2 2445799999999999999999999999994 5554 333443333222334555555544
Q ss_pred CCCCCHHHHHHHHHhc----CCC-------CCcccEEEEe--CccCCCC-CCcccH
Q 008895 492 HSSLNEAEIMEFVARQ----VSP-------YKKIRRVAFI--NAIPKSA-AGKILR 533 (549)
Q Consensus 492 ~~~~~~~~i~~~l~~~----l~~-------~~~p~~i~~v--~~lP~t~-~GKv~r 533 (549)
....+.+++.+.+... ++. ..+...+.++ ..||+++ .||..|
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 385 KDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred cccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 3333444544444443 222 1112234444 6899984 698776
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=5.8e-28 Score=233.14 Aligned_cols=322 Identities=24% Similarity=0.303 Sum_probs=235.7
Q ss_pred CCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecCh-hhHHHHHHHHHHhhhccEEEEecC
Q 008895 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPY-FHIYGLFFCFRAAALMETAVVMQR 267 (549)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl-~~~~g~~~~~~~l~~g~~~~~~~~ 267 (549)
.++...+--||||||+|+.+.+++..+..+.......+ .+...+|++....-. .+..|+..-+++-..|++++...+
T Consensus 89 ~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~ 168 (438)
T COG1541 89 KEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG 168 (438)
T ss_pred ccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC
Confidence 35566788899999999999999998876665555444 345666766654442 223334455566668888888877
Q ss_pred cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCC--CCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCcccc
Q 008895 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG--YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (549)
Q Consensus 268 ~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~--~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~ 345 (549)
-+.+.-+++++++++|++.++|+++..|++.....+ ..-.++|.+++|+|++++++++.+.+.| ++..++.||+||.
T Consensus 169 g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGltE~ 247 (438)
T COG1541 169 GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGLTEG 247 (438)
T ss_pred ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeeccccccc
Confidence 788999999999999999999999999998877664 3457899999999999999999999999 8999999999998
Q ss_pred ccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCce
Q 008895 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDL 425 (549)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~ 425 (549)
.+..+. +|......--.-+...++|+||++++.+++|+.|||+++.-. +..+ +--.|+|||+
T Consensus 248 ~g~g~~-----eC~~~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~------------~~~~-PlIRYrtgDi 309 (438)
T COG1541 248 FGPGAG-----ECTERNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLT------------KEGM-PLIRYRTGDI 309 (438)
T ss_pred cCCccc-----ccccccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEecc------------ccCc-ceEEEEcCCe
Confidence 655311 111111222234678899999999999999999999998643 1111 2335999999
Q ss_pred EEEecC----C-----eEEEEcccCCeeeeCcEeeChHHHHHHHHcCCCcc-eEEEEeecCCCCCceeEEEEEeCCCCCC
Q 008895 426 CYIDED----G-----FLFIVDRLKDLIKYKGYQVAPAELEHLLLSHREVA-DAAVIPYPDEEAGQMPMAFVVRQPHSSL 495 (549)
Q Consensus 426 ~~~~~~----g-----~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~-~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 495 (549)
..+..+ | ...+.||.||++++.|.+|+|..||.+|.+.+.+. +..++... ++..+.+.+.|+..++...
T Consensus 310 t~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V~vE~~~~~~~ 388 (438)
T COG1541 310 TVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTVRVELENEAEE 388 (438)
T ss_pred eEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEEEEEecCcccc
Confidence 999763 2 25689999999999999999999999999999998 66666666 5556677777777654211
Q ss_pred --CHHHHHHHHHhcCCCCC--ccc-EEEEeCccCCCCCCcccH
Q 008895 496 --NEAEIMEFVARQVSPYK--KIR-RVAFINAIPKSAAGKILR 533 (549)
Q Consensus 496 --~~~~i~~~l~~~l~~~~--~p~-~i~~v~~lP~t~~GKv~r 533 (549)
+..++.+.+.+.+.... .+. .++.+.++|+|. ||..|
T Consensus 389 ~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~-~K~kr 430 (438)
T COG1541 389 LEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTE-GKAKR 430 (438)
T ss_pred hHHHHHHHHHHHHHHHhhcCCceEEEEEeccceeccc-CceeE
Confidence 12222234444332222 222 444458999997 56544
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.92 E-value=1.2e-23 Score=193.61 Aligned_cols=205 Identities=13% Similarity=0.055 Sum_probs=155.4
Q ss_pred HhhcccCCCCCCCCCcEEEEC-C---CCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcC
Q 008895 44 VSSLRATLPWRDDDTVALINS-V---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLG 119 (549)
Q Consensus 44 ~~~~~~~~~~~~p~~~a~~~~-~---~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G 119 (549)
++..++++ |+++|++.. . ++.++||+||.++++++|+.|++.+|+++||+|+++++|++++++++|||+++|
T Consensus 2 ~~~~~~~~----p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G 77 (227)
T TIGR03089 2 LSPLLAAD----PASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTG 77 (227)
T ss_pred hhhhhhhC----CCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 35566777 999999742 1 234799999999999999999962599999999999999999999999999999
Q ss_pred CeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEec-----C----------CchhhhhcccCCCccc
Q 008895 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILID-----S----------PEFDSMTMSWNSKHEL 184 (549)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~~~~~~ 184 (549)
++++|++ .+++++++++++......... ..+.+. . .++......... ..
T Consensus 78 ~v~vp~n-------------~s~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 141 (227)
T TIGR03089 78 VEVVLAG-------------DPDADVVVTGPDRLAAAAGSG-EVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD--QF 141 (227)
T ss_pred CEEEeCC-------------CCCCCEEEeCcchhhhcccCC-ceEEEeccccccCCCCCCCCcccchhhhhhccCC--CC
Confidence 9999995 678999999888776654221 222221 0 012211111100 11
Q ss_pred ccc-ccCCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCCCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEE
Q 008895 185 DRA-KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (549)
Q Consensus 185 ~~~-~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~ 262 (549)
.+. ...++|++.++||||+ +|.++..+. ... +..++|+++ .+|++|.+|+ ..++.++..|+++
T Consensus 142 ~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~ 206 (227)
T TIGR03089 142 APYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-GLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSL 206 (227)
T ss_pred CCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-CCCCCCeEE-ecCCCchHHHHHHHHHHhccCceE
Confidence 111 3456899999999986 555655544 222 467889999 9999999999 6688999999999
Q ss_pred EEecCcCHHHHHHHHHHhcee
Q 008895 263 VVMQRFDLKMMLKAVEEFRVT 283 (549)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~~~t 283 (549)
++.++|++..+++.|+++|+|
T Consensus 207 v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 207 VLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred EEecCCCHHHHHHHHHhhcCC
Confidence 999999999999999999987
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=2.2e-22 Score=195.58 Aligned_cols=119 Identities=25% Similarity=0.324 Sum_probs=111.0
Q ss_pred CCCeeecCceEEE-ecCCeEEEEcccCCeeeeCc---EeeChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCC
Q 008895 416 PDGWMRTGDLCYI-DEDGFLFIVDRLKDLIKYKG---YQVAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQP 491 (549)
Q Consensus 416 ~~~~~~TGD~~~~-~~~g~~~~~GR~~d~i~~~G---~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~ 491 (549)
.+|||+|||+|++ |++|++++.||.+ +| ++|+|. ||++|.+||+|.+|+|++++++..++.+++||++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 6899999999998 6999999999998 88 799999 999999999999999999999999999999999763
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcccEEEEeCccCCCCCCcccHHHHHcccCcC
Q 008895 492 HSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKVAVPS 543 (549)
Q Consensus 492 ~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKv~r~~l~~~~~~~ 543 (549)
..+.++++++++++|+. ++|+.+.++++||+|++|||+|++|++++.+.
T Consensus 281 --~~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~ 329 (365)
T PRK09188 281 --PADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQ 329 (365)
T ss_pred --CCCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhcc
Confidence 46789999999999999 99999999999999999999999999987443
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.85 E-value=2.9e-19 Score=184.17 Aligned_cols=476 Identities=14% Similarity=0.200 Sum_probs=309.1
Q ss_pred CCCcEEEEC-CCC--ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccCCCCCC
Q 008895 56 DDTVALINS-VTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPANPVNT 130 (549)
Q Consensus 56 p~~~a~~~~-~~~--~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l~~~~~ 130 (549)
+...|.+.- ..| ..+||..+..+|.+.|+.-+.+.|+.++|+|.++...+ .++++..++|..+|.+.+|+.+..+
T Consensus 108 ~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s 187 (1363)
T KOG3628|consen 108 ATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSELSS 187 (1363)
T ss_pred CCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchhhhh
Confidence 445555432 113 68999999999999999555558999999999988666 8999999999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEEcCccHHHHhcCCCeEEEecCCchhhhhcccCCCc--------cccccccCCCCEEEEEccCC
Q 008895 131 ESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKH--------ELDRAKVCQSDVAAIMYSSG 202 (549)
Q Consensus 131 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~i~~TSG 202 (549)
.+++..+++....+++++............ -..++......+.... ....+..... ..+|-||++
T Consensus 188 ~~el~~i~~~~~~~~~l~t~a~~r~~~~~~------~~~s~~k~v~~w~t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s 260 (1363)
T KOG3628|consen 188 SEELKDIVNPTPERVALTTEAGERAFINDN------SPVSLAKAVAWWKTNDFKGNYTKDKIKKPRMQLP-YGYIEFTRS 260 (1363)
T ss_pred hhhhhcccCCCccceEeehhhhHHHhhhcc------CcccHHHHHHhhhcccccceeehhhccCCceeee-eEEEEEecc
Confidence 999999999999999999887666543321 1112222222221110 1111111222 889999999
Q ss_pred CCCccchhhhcHHHHHHHH---------------HHhhccC----CCCCCCcEEEEecChhhHHHH-HHHHHHhhhccEE
Q 008895 203 TTGRVKGVMLTHRNLTAAV---------------ASSFASS----PKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (549)
Q Consensus 203 tTG~pK~v~~t~~~l~~~~---------------~~~~~~~----~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~g~~~ 262 (549)
++|.--|++.+|+ +.... .++...+ ......++++.........|+ +.++.++..|.+.
T Consensus 261 ~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~ 339 (1363)
T KOG3628|consen 261 PLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCT 339 (1363)
T ss_pred chhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCcee
Confidence 9999888988887 43222 2221111 122344555555555555566 6688999999999
Q ss_pred EEecC---cCHHHHHHHHHHhceeeeeecHHHHHHHHhCCC-----------CCCCCCCCceEEEEecCCCCHHHHHHHH
Q 008895 263 VVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS-----------TDGYDLSSLETVACGAAPLGKDTIMAFA 328 (549)
Q Consensus 263 ~~~~~---~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~-----------~~~~~l~~lr~v~~~Ge~l~~~~~~~~~ 328 (549)
+.++. ..+..+.+.+.++|.+++..--..+.+...+.. ....+++++|.+++..+.+..+..+...
T Consensus 340 i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs 419 (1363)
T KOG3628|consen 340 IGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVS 419 (1363)
T ss_pred ecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeeeEEeeeecchHHHHHHH
Confidence 98876 667889999999999998766444433322111 1224688999999999999988665444
Q ss_pred HhC----CCCc-----------------EEcccCccccccceecccCcCC----------------------------CC
Q 008895 329 SKF----PKVV-----------------LVQAYGLTESTAGVFRTVGPDE----------------------------CR 359 (549)
Q Consensus 329 ~~~----~~~~-----------------l~~~yG~tE~~~~~~~~~~~~~----------------------------~~ 359 (549)
..+ +... ....=+++|.+......+.... ..
T Consensus 420 ~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~ 499 (1363)
T KOG3628|consen 420 DRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSL 499 (1363)
T ss_pred HhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhc
Confidence 333 1111 1122223444433322211000 00
Q ss_pred CCCccccccCC-cEEEEEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCC------------CCeeecCceE
Q 008895 360 RWGSTGRLSAG-LEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------------DGWMRTGDLC 426 (549)
Q Consensus 360 ~~~~~G~~~~~-~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~------------~~~~~TGD~~ 426 (549)
....+|...|| +.+.++++++...|.++++|||||.++++..+|+.-+..|...|.. ..+.|||-+|
T Consensus 500 s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlG 579 (1363)
T KOG3628|consen 500 SVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLG 579 (1363)
T ss_pred CccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhccee
Confidence 01133444444 6678899999999999999999999999999999877777666631 2389999999
Q ss_pred EEecCCeEEEEcccCCee-eeCcEeeChHH----------HHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC-C
Q 008895 427 YIDEDGFLFIVDRLKDLI-KYKGYQVAPAE----------LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS-S 494 (549)
Q Consensus 427 ~~~~~g~~~~~GR~~d~i-~~~G~~v~~~~----------IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~-~ 494 (549)
++.+ |.+|++|-++|++ ...|.+.+..+ |+.+.+..+.|-++.++- ++..++.++..+.. .
T Consensus 580 Fv~~-gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~------~E~~~Vv~~esP~a~e 652 (1363)
T KOG3628|consen 580 FVHN-GKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE------DEHIVVVVLESPDATE 652 (1363)
T ss_pred eeeC-CeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee------cceEEEEEEeCcchhh
Confidence 9965 5555555555544 45887766544 344455667788888872 33444444433322 1
Q ss_pred CCHHHHHHHHHhcCCCCCccc--E--EEEeCccCCCCCCcccHHHHHcccCcCCCC
Q 008895 495 LNEAEIMEFVARQVSPYKKIR--R--VAFINAIPKSAAGKILRMELRKVAVPSGSS 546 (549)
Q Consensus 495 ~~~~~i~~~l~~~l~~~~~p~--~--i~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 546 (549)
.+.-+.+..+-+.+-..++.. . ++..+.||||+-|-|.-.++++.|+++++.
T Consensus 653 ~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~~F~~G~L~ 708 (1363)
T KOG3628|consen 653 ENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQAFLEGSLP 708 (1363)
T ss_pred hhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccccHHHHHHHHcCCCC
Confidence 122223333333333344443 2 233388999998889999999999999884
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.76 E-value=1e-16 Score=159.90 Aligned_cols=244 Identities=16% Similarity=0.111 Sum_probs=155.9
Q ss_pred EEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEe--cChhhHHHHHHHHHHhhhccEEEEecCcC
Q 008895 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFT--MPYFHIYGLFFCFRAAALMETAVVMQRFD 269 (549)
Q Consensus 194 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~--~pl~~~~g~~~~~~~l~~g~~~~~~~~~~ 269 (549)
...+..||||||.|-.+..+..............+ .+...++++... .+. +.+ ..+..........-+. .+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly---~~~~~~~~~~~~~~l~-~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY---QSVNNRWISLDFFDLL-AP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH---HHHHhccceeeecCCC-cC
Confidence 34567799999999999988886644333222222 123333333332 211 111 1111111101111122 46
Q ss_pred HHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccccccce
Q 008895 270 LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGV 349 (549)
Q Consensus 270 ~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~ 349 (549)
.+.+++.|++++|+++.++|+.+..|++.....+.. .+++.++++||.++++.++.+.+.| ++++++.||+|| |.++
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GFLA 252 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hheE
Confidence 799999999999999999999999998865544433 4789999999999999999999999 799999999999 5544
Q ss_pred ecccCcCCCCCCCccccccCCcEEE--EEcCCCCCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEE
Q 008895 350 FRTVGPDECRRWGSTGRLSAGLEAK--IVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCY 427 (549)
Q Consensus 350 ~~~~~~~~~~~~~~~G~~~~~~~~~--i~d~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~ 427 (549)
..+.. +....--+.+.++ ++|++ ++ ++.+|++-. |. .. +--.|+|||++.
T Consensus 253 ~eC~~-------g~lHl~ed~~~vE~~ivD~~-~~-------~~~ViT~L~------n~----~~---PlIRYrtGD~~~ 304 (430)
T TIGR02304 253 STCRC-------GTLHLNEDLVHIEKQYLDEH-KR-------FVPIITDFT------RT----TQ---PIVRYRLNDILV 304 (430)
T ss_pred EecCC-------CCEEEccccEEEEeeEECCC-Cc-------eEEEEecCC------Cc----cc---eEEeeeCCCEEE
Confidence 43311 1121112234445 77743 22 344665432 11 01 222499999998
Q ss_pred EecC----C----eE-EEEcccCCeeee---CcE--eeChHHHHHHHH-cCCCcceEEEEe
Q 008895 428 IDED----G----FL-FIVDRLKDLIKY---KGY--QVAPAELEHLLL-SHREVADAAVIP 473 (549)
Q Consensus 428 ~~~~----g----~~-~~~GR~~d~i~~---~G~--~v~~~~IE~~l~-~~~~v~~~~vv~ 473 (549)
...+ | .+ .+.||.+|++++ +|. .|+|..++.++. ..++|.+..++-
T Consensus 305 ~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q 365 (430)
T TIGR02304 305 ESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQ 365 (430)
T ss_pred eCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEE
Confidence 8544 3 23 388999999985 454 459999998754 578999988873
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.38 E-value=7.5e-13 Score=98.31 Aligned_cols=70 Identities=37% Similarity=0.613 Sum_probs=61.9
Q ss_pred HHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcc--cEEEEeCc-cCCCCCCc
Q 008895 455 ELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKI--RRVAFINA-IPKSAAGK 530 (549)
Q Consensus 455 ~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p--~~i~~v~~-lP~t~~GK 530 (549)
|||++|.+||+|.+|+|++.+++..|+.+++|+++ +.++|+++++++|++|+.| ..++.+++ ||+|++||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSGK 73 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTSS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCCC
Confidence 79999999999999999999998889999999998 4589999999999999999 45555677 99999998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.15 E-value=2.8e-09 Score=104.24 Aligned_cols=226 Identities=18% Similarity=0.224 Sum_probs=135.6
Q ss_pred CCCEEEEEccCCCCCccchhhhcHHHHHHHH---HHhhccCCCCCC-CcEEEEecChhh---HHHH--HHHHHHhhhccE
Q 008895 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV---ASSFASSPKRVS-PAVMLFTMPYFH---IYGL--FFCFRAAALMET 261 (549)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~---~~~~~~~~~~~~-~~~~~~~~pl~~---~~g~--~~~~~~l~~g~~ 261 (549)
.+++..++.||||||.|--+.+.+..+.... ......+.+... .-.++...|... .++. ...+.....+..
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR 167 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce
Confidence 4567788899999999755555555444333 223332222222 223333333321 1111 222223334444
Q ss_pred EEEec--CcCHHHHHHHHH----HhceeeeeecHHHHHHHHhCCCCCCCC--CC-CceEEEEec------CCCC-HHHHH
Q 008895 262 AVVMQ--RFDLKMMLKAVE----EFRVTHAAVTPPIVVAMSKGGSTDGYD--LS-SLETVACGA------APLG-KDTIM 325 (549)
Q Consensus 262 ~~~~~--~~~~~~~~~~l~----~~~~t~l~~~P~~l~~l~~~~~~~~~~--l~-~lr~v~~~G------e~l~-~~~~~ 325 (549)
.... .++.+.+.+.+. +.++..+++.|.++..++...+..+.. |+ ..+.+..|| +.++ .++.+
T Consensus 168 -~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 168 -FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred -eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 3333 367777776664 457888999998777666555444443 33 455566666 4565 57778
Q ss_pred HHHHhCCC---CcEEcccCccccccceecccCcCCCCCCCccccccCCcEEEEEcCCCCCcCCCCCcceEEEecCCcccc
Q 008895 326 AFASKFPK---VVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKG 402 (549)
Q Consensus 326 ~~~~~~~~---~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~g 402 (549)
.+.+.|+. ..+++.||+||.....+.+. . +..-. .+. +.|+||++.++++.|+.|-|.+-++....
T Consensus 247 ~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~---~----~~~~~-p~w--V~iRDp~tl~~~~~Ge~Gli~vidl~~~s- 315 (365)
T PF04443_consen 247 RLQEVFGVIPIENIYDMYGMTELNSQAYECG---H----GHFHV-PPW--VIIRDPETLEPLPPGETGLIQVIDLANTS- 315 (365)
T ss_pred HHHHHHCCCCHHHeeeeeeccccchhheeCC---C----CcccC-CCe--EEEECCCCCcCCCCCCeeEEEEEcccccC-
Confidence 88888833 47999999999776544421 1 11111 222 77779999999999999999887654221
Q ss_pred cCCCccccccccCCCCeeecCceEEEecC--------CeEEEEcccC
Q 008895 403 YVGEPEVTSATLLPDGWMRTGDLCYIDED--------GFLFIVDRLK 441 (549)
Q Consensus 403 y~~~~~~~~~~~~~~~~~~TGD~~~~~~~--------g~~~~~GR~~ 441 (549)
| -+..-|.|+|.+..+ .++.++||.+
T Consensus 316 ~-------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~ 349 (365)
T PF04443_consen 316 Y-------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRAD 349 (365)
T ss_pred C-------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCC
Confidence 1 123679999987654 2799999976
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.74 E-value=5.3e-08 Score=101.00 Aligned_cols=178 Identities=16% Similarity=0.170 Sum_probs=104.3
Q ss_pred CCCceEEEEecCCCCHHHHHHHHHhCCCCcE-EcccCccccccceecccCcCCCCCCCccccccCCc-EEEEEcCCC---
Q 008895 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVL-VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGL-EAKIVDPET--- 380 (549)
Q Consensus 306 l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l-~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~d~~~--- 380 (549)
.++|+.|.+.+..-.......+++.+|++.+ ...|++||+ .+.+.. . .. ...+.+.++. -.+-++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~-~---~~--~~~~~l~~~~~ffEFip~~~~~~ 338 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPL-D---PE--DPGYVLAPDSGFFEFIPVDEDEQ 338 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-----CC--C--EEE-TTSSEEEEEE-STT--
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEec-C---CC--CCceEeecCCeEEEEEeccCCcc
Confidence 6899977776666666777888888877544 468999995 333321 1 00 1122222322 334443222
Q ss_pred -----C-----CcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEec--CC--eEEEEcccCCeeee
Q 008895 381 -----G-----DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDE--DG--FLFIVDRLKDLIKY 446 (549)
Q Consensus 381 -----~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~--~g--~~~~~GR~~d~i~~ 446 (549)
. ..+..|+.-||+|+..+ |.| .|+.||++++.. ++ .+.|+||.+.++.+
T Consensus 339 ~~~~~~~~l~~~ele~G~~YelviTt~~---GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l 401 (528)
T PF03321_consen 339 NPSEQPKTLLLHELEVGEEYELVITTNS---GLY--------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSL 401 (528)
T ss_dssp -----SSSEEGGG--TT-EEEEEEESTT---S-S--------------SEEECEEEEEEEEETTEEEEEEEEETTEEE-S
T ss_pred cccCCCceecHHHhcCCCeEEEEEeccc---cee--------------eeecCCEEEEeeccCCCcEEEEeccCCceeec
Confidence 1 25567888899998643 222 299999999853 34 79999999999999
Q ss_pred CcEeeChHHHHHHHHcC-----CCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcC
Q 008895 447 KGYQVAPAELEHLLLSH-----REVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQV 508 (549)
Q Consensus 447 ~G~~v~~~~IE~~l~~~-----~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l 508 (549)
.|++++-.+|+.++.+. -.+.+..+.+.........-+.++..... ..+.+++.+.|.+.|
T Consensus 402 ~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~-~~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 402 FGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE-PDDLEELAKALDESL 467 (528)
T ss_dssp SS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS--HHHHHHHHHHHHHCS
T ss_pred ceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC-chHHHHHHHHHHHHh
Confidence 99999999999998764 33667777766322233455666666544 224556777776666
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.20 E-value=0.00033 Score=73.20 Aligned_cols=133 Identities=17% Similarity=0.152 Sum_probs=81.9
Q ss_pred CCC---ceEEEEecCCCCHHHHHHHHHhCCCC-cEEcccCccccccceecccCcCCCCCCCccccc--cCCcEEEEEcCC
Q 008895 306 LSS---LETVACGAAPLGKDTIMAFASKFPKV-VLVQAYGLTESTAGVFRTVGPDECRRWGSTGRL--SAGLEAKIVDPE 379 (549)
Q Consensus 306 l~~---lr~v~~~Ge~l~~~~~~~~~~~~~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~i~d~~ 379 (549)
.++ +..+..||-. .-+..++..+++. .+...|++||+ .+.+.. . ..+ .+...+.. +.+.-.+-++.+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg-~~gi~~-~-~~~-~p~~~~~~l~~~~~ffEFiP~~ 373 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSES-YFGINL-N-PMC-KPSEVSYTIMPNMAYFEFLPHN 373 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccce-EEEeec-C-CCC-CCCCcceEecCCcEEEEeeecc
Confidence 577 4445555543 6667777777665 45578999995 333321 1 111 11111111 223444444211
Q ss_pred -C------------CCcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEec----CCeEEEEcccCC
Q 008895 380 -T------------GDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDE----DGFLFIVDRLKD 442 (549)
Q Consensus 380 -~------------~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~d 442 (549)
. ...+..|+.-+|+|+..+ |.| .|+.||+.++.. --.+.|+||.+.
T Consensus 374 ~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~---GLy--------------RY~iGDvVrvtgf~~~~P~i~F~gR~~~ 436 (597)
T PLN02249 374 HDGDGALDETSLVELADVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFKFIRRKNV 436 (597)
T ss_pred cCCcccCCCCcEecHHHcCCCCeEEEEEEccc---cee--------------EeecCCEEEEeeccCCCcEEEEEccCCc
Confidence 1 123456777788886532 111 399999999853 346899999999
Q ss_pred eeeeCcEeeChHHHHHHHHc
Q 008895 443 LIKYKGYQVAPAELEHLLLS 462 (549)
Q Consensus 443 ~i~~~G~~v~~~~IE~~l~~ 462 (549)
++.+.|++++-.+++.++.+
T Consensus 437 ~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 437 LLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred ceecccccCCHHHHHHHHHH
Confidence 99999999999999998876
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=98.18 E-value=0.00038 Score=72.18 Aligned_cols=137 Identities=12% Similarity=0.049 Sum_probs=89.2
Q ss_pred CCCceEEEEecCCCCHHHHHHHHHhCCCCcEEc-ccCccccccceecccCcCCCCCCCccccccCCcE-EEEEcCCCC--
Q 008895 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ-AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLE-AKIVDPETG-- 381 (549)
Q Consensus 306 l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~-~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~i~d~~~~-- 381 (549)
.++++.|-+.-..-.......++..++++++.. .|++||+-. .+... ..+..........|+.. .+.++.+++
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~-ginl~--p~~~p~~~sy~L~p~~~yFEFip~~~~~~ 368 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYF-GINLK--PLSDPSDVSYTLLPNMAYFEFLPVDKNNG 368 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEE-EeccC--cCCCccCCceeecCCcEEEEEeecCCCcc
Confidence 578888877666667777788887778877665 899999533 33211 11111112233344443 233321111
Q ss_pred ---------------------------CcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEe----c
Q 008895 382 ---------------------------DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID----E 430 (549)
Q Consensus 382 ---------------------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~----~ 430 (549)
..+..|+.-||+|+.-+ |. -.|+.||+.++. .
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~---GL--------------YRYrlGDvv~V~GF~n~ 431 (606)
T PLN02247 369 EVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT---GL--------------YRYRVGDILMVTGFYNN 431 (606)
T ss_pred cccccccccccccccccccccCceecHHHccCCCeEEEEEEecC---ce--------------EEEecCCEEEEeeecCC
Confidence 13456777788886532 11 138999999873 3
Q ss_pred CCeEEEEcccCCeeeeCcEeeChHHHHHHHHc
Q 008895 431 DGFLFIVDRLKDLIKYKGYQVAPAELEHLLLS 462 (549)
Q Consensus 431 ~g~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~ 462 (549)
.-.+.|++|.+.+..+.|++++-.++..++.+
T Consensus 432 ~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 432 APQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQ 463 (606)
T ss_pred CceEEEEecCCceeecccccCCHHHHHHHHHH
Confidence 46799999999999999999999999888765
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=98.04 E-value=0.0005 Score=71.20 Aligned_cols=137 Identities=14% Similarity=0.095 Sum_probs=87.8
Q ss_pred CCCceEEEEecCCCCHHHHHHHHHhCCCCcEE-cccCccccccceecccCcCCCCCCCccccccCCcE-EEEEcCCC---
Q 008895 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLV-QAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLE-AKIVDPET--- 380 (549)
Q Consensus 306 l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~-~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~i~d~~~--- 380 (549)
.++++.|-+.-..-.......++..++++++. ..|++||+-. .+.... .+..........|+.. .+.++.+.
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~-ginl~P--~~~p~~~sy~L~p~~~yFEFip~~~~~~ 379 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYF-GVNLNP--LCKPSEVSYTLIPTMAYFEFLPVHRNNG 379 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEE-EeccCC--CCCcccceeeecCCcEEEEEeeccCccc
Confidence 57888887766666677777887777777655 4799999533 332111 1111112233334433 23332111
Q ss_pred ----------------C-----CcCCCCCcceEEEecCCcccccCCCccccccccCCCCeeecCceEEEe----cCCeEE
Q 008895 381 ----------------G-----DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID----EDGFLF 435 (549)
Q Consensus 381 ----------------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~----~~g~~~ 435 (549)
+ ..+..|+.-||+|+.-+ |.| .|+.||+.++. ..-.+.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---GLy--------------RYrlGDvv~V~Gf~n~~P~~~ 442 (612)
T PLN02620 380 VTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---GLY--------------RYRVGDVLRVAGFKNKAPQFS 442 (612)
T ss_pred ccccccccccccccccCccccHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCCCceEE
Confidence 1 12456777888886532 111 38999999874 345799
Q ss_pred EEcccCCeeeeCcEeeChHHHHHHHHc
Q 008895 436 IVDRLKDLIKYKGYQVAPAELEHLLLS 462 (549)
Q Consensus 436 ~~GR~~d~i~~~G~~v~~~~IE~~l~~ 462 (549)
|++|.+-+..+.|++++-.++..++.+
T Consensus 443 Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 443 FICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred EEeecCceeecccccCCHHHHHHHHHH
Confidence 999999999999999999998887754
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.88 E-value=1.9e-05 Score=61.76 Aligned_cols=81 Identities=22% Similarity=0.290 Sum_probs=48.8
Q ss_pred cEeeChHHHHHHHHcCCCcc-eEEEEeecCCCCCceeEEEEEeCCCCCC---CH----HHHHHHHHhcCCCCCcccEEEE
Q 008895 448 GYQVAPAELEHLLLSHREVA-DAAVIPYPDEEAGQMPMAFVVRQPHSSL---NE----AEIMEFVARQVSPYKKIRRVAF 519 (549)
Q Consensus 448 G~~v~~~~IE~~l~~~~~v~-~~~vv~~~~~~~~~~~~~~v~~~~~~~~---~~----~~i~~~l~~~l~~~~~p~~i~~ 519 (549)
|.+|+|.+||++|.++|++. +..++.... ...+.+.+.|...++... +. ++|.+.+++.+.-. | .+.+
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~-~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~--~-~V~l 76 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTRE-GGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVR--P-EVEL 76 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEE-TTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcC-CCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCce--E-EEEE
Confidence 88999999999999999999 444444433 456677777887765432 12 34555555554432 3 3555
Q ss_pred e--CccCCCCCCcccH
Q 008895 520 I--NAIPKSAAGKILR 533 (549)
Q Consensus 520 v--~~lP~t~~GKv~r 533 (549)
+ +.||++ .||..|
T Consensus 77 v~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 77 VPPGTLPRS-EGKAKR 91 (96)
T ss_dssp E-TT-S----SSSS-S
T ss_pred ECCCCccCC-CCcceE
Confidence 4 689998 588765
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.78 E-value=0.2 Score=50.06 Aligned_cols=87 Identities=17% Similarity=0.101 Sum_probs=72.8
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 008895 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (549)
Q Consensus 69 ~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (549)
-+|+.|+...+..+|+.|.. .|..+||+|.++..-+ ..-+...+|+.++|++++|+.+. ..+.-..++.+.++.+|
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~-~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 109 GYTAKDIERWAELLARSLYS-AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 59999999999999999998 8999999998876511 12278899999999999999883 45666788999999999
Q ss_pred EEcCccHHHHh
Q 008895 147 FATSSVVHKLA 157 (549)
Q Consensus 147 i~~~~~~~~~~ 157 (549)
.+.++....+.
T Consensus 187 ~~tps~~l~la 197 (438)
T COG1541 187 AATPSYLLYLA 197 (438)
T ss_pred EEChHHHHHHH
Confidence 99988766553
No 140
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=84.59 E-value=6.4 Score=40.17 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=65.5
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 008895 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (549)
Q Consensus 69 ~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (549)
.+|..++...+..+++.+.. .|+++||++......+. ......++....|+..+++++.. .+.+...+++.++.++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 46788887777777888887 89999999887665443 22334677889999999887654 5778889999999999
Q ss_pred EEcCccHHHH
Q 008895 147 FATSSVVHKL 156 (549)
Q Consensus 147 i~~~~~~~~~ 156 (549)
+..+.....+
T Consensus 172 ~~~Ps~l~~L 181 (422)
T TIGR02155 172 MVTPSYMLNL 181 (422)
T ss_pred EEcHHHHHHH
Confidence 9888765544
No 141
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=84.06 E-value=8.3 Score=39.69 Aligned_cols=80 Identities=13% Similarity=0.176 Sum_probs=60.6
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh--HHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 008895 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (549)
Q Consensus 69 ~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~--~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (549)
-+|..++...+..+++.+.. .|+.+||++.++.+.+.. .....+++...|+.++|... ......++++.++.++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~-~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVS-QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eecHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 47999999888888888887 899999999998765543 23445788899998887653 2345677888888888
Q ss_pred EEcCcc
Q 008895 147 FATSSV 152 (549)
Q Consensus 147 i~~~~~ 152 (549)
+.....
T Consensus 181 ~~~ps~ 186 (445)
T TIGR03335 181 VASVFK 186 (445)
T ss_pred EECHHH
Confidence 765543
No 142
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=74.87 E-value=19 Score=33.11 Aligned_cols=76 Identities=9% Similarity=0.060 Sum_probs=53.6
Q ss_pred CCCcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCCCCCCHHH
Q 008895 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESE 133 (549)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~~~~~~~~ 133 (549)
++.+|++....+ .|...+...+ .. .++.++|++. ..|-.. -+...+++++.+|++.+.+ +.+++++
T Consensus 149 ~~D~a~l~yTsg--~~~~~~~~~~-------~~-~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~ 216 (227)
T TIGR03089 149 ATAPALVAGGGE--WTGAELVAAA-------RA-AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPAR 216 (227)
T ss_pred CCcceeeecccc--ccHHHHHHHH-------hh-cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHH
Confidence 456676654222 2344333322 44 7899999999 877654 3445789999999998888 6899999
Q ss_pred HHHHHhhcCC
Q 008895 134 ISRQIQLSNP 143 (549)
Q Consensus 134 l~~~l~~~~~ 143 (549)
+...+++.++
T Consensus 217 ~l~~i~~~~v 226 (227)
T TIGR03089 217 LDQIAETERV 226 (227)
T ss_pred HHHHHHhhcC
Confidence 9999988765
No 143
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=71.34 E-value=38 Score=35.31 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=69.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChH-HHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~-~v~~la~~~~G~~~v~l~~ 127 (549)
++.++++.. .+| -.+|+..+...+..... . .++++++++....+....+ +...++++..|+..+..+.
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---W-LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---h-hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 455666543 223 35789888866665544 3 6889999998877654322 3344558888998887766
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
. +.+.+...+++.++.++++.+.....+.
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~ 270 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLL 270 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHH
Confidence 4 8999999999999999998887766553
No 144
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=67.28 E-value=32 Score=35.89 Aligned_cols=97 Identities=20% Similarity=0.153 Sum_probs=69.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
++.++++.. .+| ..+|+..+...+..+. .. .++++++++...++... .+...+++++..|+.+++.
T Consensus 165 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 165 PDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWA---EY-LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---Hh-hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 566776543 223 3588888876554443 22 57789999988776543 3455688999999988765
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
+..+++.+...+++.++.++...+.....+.
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 270 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLL 270 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHH
Confidence 5678899999999999999988777666543
No 145
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=62.78 E-value=60 Score=34.34 Aligned_cols=97 Identities=11% Similarity=0.014 Sum_probs=67.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l~ 126 (549)
|+.+|++.. .+| ..+|++.+...+.... .. .++.++|++...+|-. .-+...++..+..|+..+...
T Consensus 182 ~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 182 PEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KF-FSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred cCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---Hh-cCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 677877643 223 4689988876544433 33 5778899988777643 233344677788888877665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
...+++.+...+++.++..+...+.....+
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 287 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYI 287 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHH
Confidence 557888999999999999998877766554
No 146
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=61.38 E-value=32 Score=34.74 Aligned_cols=97 Identities=22% Similarity=0.266 Sum_probs=69.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
|+.++++.. .+| ..+|++.+...+..+. +....+++ |++...++-+. .++..+++++..|+..+..+
T Consensus 154 ~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (417)
T PF00501_consen 154 PDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPS 229 (417)
T ss_dssp TTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEES
T ss_pred ccceeEeeccccccccccccccccccccccccccc--cccccccC--ceEEeeccccccccccccccccccccccccccc
Confidence 678887643 233 4689999999988877 54422333 66665555553 33367899999999999888
Q ss_pred CCCC--HHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNT--ESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
.... ++.+...+++.++.++++.+.....+
T Consensus 230 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 261 (417)
T PF00501_consen 230 PFDLFDPESLLELISRYKPTILFAVPSMLEAL 261 (417)
T ss_dssp SHHHHHHHHHHHHHHHHTESEEEEEHHHHHHH
T ss_pred cccccccccchhcccccccccccccccccccc
Confidence 6543 56788999999999999888776655
No 147
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=59.22 E-value=74 Score=33.86 Aligned_cols=98 Identities=9% Similarity=0.039 Sum_probs=68.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh--HHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~--~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++.. .+| ..+|...+...+.. .... .++.++|++....+.... ....+++.+..|+..+...
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~---~~~~-~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQT---GKYV-LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHH---HHHh-cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 566776642 223 35788877654433 2333 577889987666544322 3456788889999888777
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
...+++.+...+++.++.++...+..+..+.
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 7788999999999999999998887766553
No 148
>PRK08315 AMP-binding domain protein; Validated
Probab=59.16 E-value=85 Score=33.21 Aligned_cols=83 Identities=4% Similarity=0.031 Sum_probs=60.4
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCC--CChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~--~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (549)
..+|...+...+..+ ....+++++|++....+- ...+...+++.+..|+..+......++..+...+++.++.+
T Consensus 217 v~~s~~~l~~~~~~~----~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~ 292 (559)
T PRK08315 217 ATLTHRNILNNGYFI----GEAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTA 292 (559)
T ss_pred EEeeHHHHHHHHHHH----HHhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeE
Confidence 457888776554433 333678999999877664 34455667888899988875566677888999999999998
Q ss_pred EEEcCccHH
Q 008895 146 AFATSSVVH 154 (549)
Q Consensus 146 ii~~~~~~~ 154 (549)
+...+....
T Consensus 293 ~~~~P~~~~ 301 (559)
T PRK08315 293 LYGVPTMFI 301 (559)
T ss_pred EecchHHHH
Confidence 887766544
No 149
>PRK12583 acyl-CoA synthetase; Provisional
Probab=58.73 E-value=1e+02 Score=32.59 Aligned_cols=95 Identities=12% Similarity=0.116 Sum_probs=65.6
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCC--CChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~--~~~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++. +.+| ..+|+..+...+..+... .++.++|++....+- ....+..+++++..|+..+...
T Consensus 200 ~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~ 275 (558)
T PRK12583 200 RDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAES----LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPN 275 (558)
T ss_pred CCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHH----hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeec
Confidence 45566543 2233 368888886555544332 577889998877653 3456677788888998887545
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVH 154 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (549)
...+...+...+++.++..++..+....
T Consensus 276 ~~~~~~~~~~~i~~~~~t~l~~~P~~~~ 303 (558)
T PRK12583 276 EAFDPLATLQAVEEERCTALYGVPTMFI 303 (558)
T ss_pred CCCCHHHHHHHHHHcCCeEEeccHHHHH
Confidence 5567888889999999999887665543
No 150
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=57.83 E-value=1.1e+02 Score=30.55 Aligned_cols=98 Identities=18% Similarity=0.154 Sum_probs=70.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~~ 127 (549)
++.++++.. .+| ..+|+..+...+..+.. . .+++++|++....+.... .+..+++.+..|+..+..+.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~ 194 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---R-YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPE 194 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---h-cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcCh
Confidence 456666542 222 45788888776666654 3 567889998887766543 45567888888988887776
Q ss_pred CCC--HHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 128 VNT--ESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 128 ~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
... ...+..++++.++..++..+.....+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~ 226 (408)
T TIGR01733 195 DEERDAALLAALIAEHPVTVLNLTPSLLALLA 226 (408)
T ss_pred hhccCHHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 544 788999999999999998887776654
No 151
>PLN03051 acyl-activating enzyme; Provisional
Probab=56.07 E-value=91 Score=32.53 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=64.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~~ 127 (549)
++.+|++.. .+| ..+|...+...+... ... .++.++|++....+-+.. .+..+++++..|+..+..+.
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~ 193 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAH-MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGG 193 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHh-cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCC
Confidence 466776543 223 357877765543222 233 578889988766654321 13457788899999887765
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
....+.+...+++.++.++..-+..+..+
T Consensus 194 ~~~~~~~~~~i~~~~vt~~~~vP~~~~~l 222 (499)
T PLN03051 194 APLGRGFGKFVQDAGVTVLGLVPSIVKAW 222 (499)
T ss_pred CCCcHHHHHHHHHhCCcEEEeCHHHHHHH
Confidence 55678899999999999998877666544
No 152
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=54.05 E-value=20 Score=26.25 Aligned_cols=41 Identities=15% Similarity=0.115 Sum_probs=35.6
Q ss_pred HHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEc
Q 008895 83 ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIIS 123 (549)
Q Consensus 83 A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v 123 (549)
..+|.+..|+++|+.++.+.....|.+..+=+++++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 46788878999999999999999999999999999885433
No 153
>PLN02246 4-coumarate--CoA ligase
Probab=52.92 E-value=93 Score=32.77 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=67.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
|+.++++.. .+| ..+|...+...+........+..++.++|++....+-.. .+...+++.+..|+..+..+
T Consensus 178 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 257 (537)
T PLN02246 178 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP 257 (537)
T ss_pred ccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC
Confidence 667776542 223 457888887665554433332367889999987776432 22344677888999988886
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
. .+.+.+...+++.++.++...+.....+
T Consensus 258 ~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l 286 (537)
T PLN02246 258 K-FEIGALLELIQRHKVTIAPFVPPIVLAI 286 (537)
T ss_pred C-CCHHHHHHHHHHhCceEEEcchHHHHHH
Confidence 4 6788889999999988887666554433
No 154
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=52.65 E-value=66 Score=32.02 Aligned_cols=64 Identities=14% Similarity=0.027 Sum_probs=49.3
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCC-----CCCHHHHHHHHhhcCCeEEEE
Q 008895 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQLSNPVIAFA 148 (549)
Q Consensus 80 ~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~ii~ 148 (549)
..+.-.|+. +++++||-|.+ .+.-|+...=+++..|+.+|.+|- +.+++.++..+... .+.||.
T Consensus 60 ~AL~laL~a-l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 60 AALHLALLA-LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHh-cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 445555676 78999995543 578899999999999999999874 35789999988875 566653
No 155
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=51.99 E-value=81 Score=31.96 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=64.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC-hHHHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~-~~~v~~la~~~~G~~~v~l~~ 127 (549)
+++++++.. .+| ..+|++.+...+..++.. .+++++|++....+-.. ..+..+++++..|+..+..++
T Consensus 110 ~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~ 185 (436)
T TIGR01923 110 MDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKEN----LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDK 185 (436)
T ss_pred cCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhh----cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecch
Confidence 456666532 223 468999888766655543 57899999988776532 223356788889998887764
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
. +.+...+++.++.++...+.....+
T Consensus 186 ~---~~~~~~l~~~~~t~~~~~P~~l~~l 211 (436)
T TIGR01923 186 F---NQLLEMIANERVTHISLVPTQLNRL 211 (436)
T ss_pred H---HHHHHHHHHhCCeEEEeHHHHHHHH
Confidence 3 3788889999999988877665544
No 156
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=48.53 E-value=1.8e+02 Score=30.90 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=66.4
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC-hHHHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~-~~~v~~la~~~~G~~~v~l~~ 127 (549)
++.+|++. +.+| ..+|...+...+.... .. .++.++|++....+-.. .-+..+++.+..|+..+.. +
T Consensus 171 ~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 171 PDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AI-VGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hh-cCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 56777653 2333 3678887765444332 33 67889998887776432 2234567788888877765 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
.+++..+...+++.++..+...+.....+.
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 275 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLI 275 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHH
Confidence 678889999999999999988887766553
No 157
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=48.52 E-value=1.7e+02 Score=30.12 Aligned_cols=85 Identities=11% Similarity=0.133 Sum_probs=64.0
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcC--CCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLST--NSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~--~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (549)
.++|--++.+.+..++.. .|+...+++++-.| .+.-.++..+|++.-|++.|.-+|.+.+....+.+.+.++..
T Consensus 252 atLsH~~~~Nna~~vg~r----~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~ 327 (596)
T KOG1177|consen 252 ATLSHYNFLNNARAVGAR----AGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTT 327 (596)
T ss_pred eeeehhhhhhhHHHHHHH----hCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEE
Confidence 578888888888776643 46666555554322 234556677888889999999899999999999999999999
Q ss_pred EEEcCccHHHH
Q 008895 146 AFATSSVVHKL 156 (549)
Q Consensus 146 ii~~~~~~~~~ 156 (549)
++..+..+..+
T Consensus 328 l~gtPtM~~Dl 338 (596)
T KOG1177|consen 328 LYGTPTMFVDL 338 (596)
T ss_pred EecChHHHHHH
Confidence 99877655443
No 158
>PRK08308 acyl-CoA synthetase; Validated
Probab=48.42 E-value=1.4e+02 Score=30.01 Aligned_cols=96 Identities=16% Similarity=0.188 Sum_probs=66.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l~ 126 (549)
++..+++.. .+| ..+|++.+...+..+.. . .++.++|++....+.. ..++..++..+..|+..+..+
T Consensus 100 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~---~-~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 100 AEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNE---A-LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHH---h-hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 556666543 223 46899888766655543 3 5567888887776554 334566788889998877665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
..+++.+...+++.++.+++..+.....+
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~~~~~l 204 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPLMLHIL 204 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHHHHHHH
Confidence 45678888889999998888777665544
No 159
>PRK08316 acyl-CoA synthetase; Validated
Probab=46.96 E-value=1.8e+02 Score=30.36 Aligned_cols=84 Identities=14% Similarity=0.094 Sum_probs=60.4
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (549)
..+|++.+...+. ..... .++++++++....+-.. .+...+++++..|+..++.+ ..+.+.+...+++.++.+
T Consensus 189 v~~s~~~l~~~~~---~~~~~-~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 263 (523)
T PRK08316 189 AMLTHRALIAEYV---SCIVA-GDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITS 263 (523)
T ss_pred EEEecHHHHHHHH---HHHHH-hCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeE
Confidence 4688888765433 33444 67899999888776432 23345667788899988875 357889999999999999
Q ss_pred EEEcCccHHHH
Q 008895 146 AFATSSVVHKL 156 (549)
Q Consensus 146 ii~~~~~~~~~ 156 (549)
+.+.+.....+
T Consensus 264 ~~~~P~~~~~l 274 (523)
T PRK08316 264 FFAPPTVWISL 274 (523)
T ss_pred EEeCHHHHHHH
Confidence 98877665444
No 160
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=46.62 E-value=1.6e+02 Score=30.68 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=63.7
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (549)
..+|...+...+...... .++.++|++...++-... .+..+++++..|+..+..+ ....+.+...+++.++.++
T Consensus 179 v~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY----LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGL 253 (515)
T ss_pred EEEecHHHHHHHHHHHHH----hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceE
Confidence 468888887766655432 467889999888875543 3456778899999888664 5678899999999999999
Q ss_pred EEcCccHHHHh
Q 008895 147 FATSSVVHKLA 157 (549)
Q Consensus 147 i~~~~~~~~~~ 157 (549)
...+.....+.
T Consensus 254 ~~~P~~~~~l~ 264 (515)
T TIGR03098 254 AAVPPLWAQLA 264 (515)
T ss_pred ecChHHHHHHH
Confidence 98887766553
No 161
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=46.16 E-value=1.6e+02 Score=30.28 Aligned_cols=96 Identities=16% Similarity=0.108 Sum_probs=66.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~~ 127 (549)
++.++++.. .+| ..+|+..+...+.. .... .+++++|++....+-... -+..+++.+..|+..+..+
T Consensus 140 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~---~~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 214 (483)
T PRK03640 140 LDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVG---SALN-LGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE- 214 (483)
T ss_pred CCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHH---HHHh-cCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-
Confidence 566666533 223 35888877654332 2233 588999999988764322 2334577788898887665
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
..+...+...+++.++.++...+.....+
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l 243 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVSTMLQRL 243 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHHHHH
Confidence 57789999999999999999888766654
No 162
>PRK06188 acyl-CoA synthetase; Validated
Probab=45.83 E-value=1.5e+02 Score=30.97 Aligned_cols=96 Identities=11% Similarity=0.077 Sum_probs=67.6
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCC
Q 008895 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV 128 (549)
Q Consensus 56 p~~~a~~~~~---~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~ 128 (549)
++.+|++... +| ..+|+..+...+.... .. .++..++++....+-.......+++.+..|+..+..+ .
T Consensus 167 ~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~ 241 (524)
T PRK06188 167 PPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQL---AE-WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-K 241 (524)
T ss_pred CCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hh-cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-C
Confidence 4446665432 22 3578877766554332 33 6778899998888777666666778888898887775 4
Q ss_pred CCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 129 NTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 129 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
.++..+...+++.++.++...+.....+
T Consensus 242 ~~~~~~~~~i~~~~~t~~~~~P~~l~~l 269 (524)
T PRK06188 242 FDPAEVLRAIEEQRITATFLVPTMIYAL 269 (524)
T ss_pred CCHHHHHHHHHHhCCEEEEehHHHHHHH
Confidence 6688899999999999998877665544
No 163
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=43.35 E-value=1.8e+02 Score=30.27 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=66.5
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh--HHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~~---~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~--~~v~~la~~~~G~~~v~l~ 126 (549)
++.++++... +| ..+|+..+...+... .....+++++|++....+-... +...+++.+..|+..+..+
T Consensus 160 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~---~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 160 ADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELY---ARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHH---hHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 5667766432 22 467888876654332 2233688999998877664432 3345677788898888777
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVH 154 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (549)
...+...+...+++.++..+...+....
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 264 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYA 264 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHH
Confidence 6678889999999999999988775544
No 164
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=42.71 E-value=75 Score=31.61 Aligned_cols=64 Identities=14% Similarity=0.090 Sum_probs=45.0
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEE
Q 008895 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (549)
Q Consensus 80 ~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 148 (549)
..+-..|.. +|+++||.|.+- ..-+....-|+..+|+.++.+|-+ .+++.+...+..-. ++|+.
T Consensus 51 ~Al~~al~~-l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 51 SALHLALRA-LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHHHHHHHH-TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred HHHHHHHHh-cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 345556777 899999998875 566778888999999999998743 56888888877554 55554
No 165
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.36 E-value=1.3e+02 Score=31.79 Aligned_cols=87 Identities=14% Similarity=0.024 Sum_probs=58.7
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (549)
..+|...+...+ .+..+....++.++|++..+.+-... ....+++++.+|+..+...+..+.+.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 356766654322 23333333678889988877654322 223346778899888877777889999999999999998
Q ss_pred EEcCccHHHH
Q 008895 147 FATSSVVHKL 156 (549)
Q Consensus 147 i~~~~~~~~~ 156 (549)
...+.....+
T Consensus 272 ~~~P~~~~~l 281 (539)
T PRK07008 272 AGVPTVWLGL 281 (539)
T ss_pred EechHHHHHH
Confidence 8777665544
No 166
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=40.46 E-value=2.7e+02 Score=26.40 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=59.7
Q ss_pred CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCC----CHHHHHHHHhhcC
Q 008895 67 GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN----TESEISRQIQLSN 142 (549)
Q Consensus 67 ~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~----~~~~l~~~l~~~~ 142 (549)
+..+-++-+ -|.-.+|+.|++ . |..|.+++.+....... .+...|..+..++-.. ..+++..++++.+
T Consensus 9 ~~~iG~GHv-~Rcl~LA~~l~~-~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~ 80 (279)
T TIGR03590 9 SSEIGLGHV-MRCLTLARALHA-Q----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEK 80 (279)
T ss_pred CccccccHH-HHHHHHHHHHHH-C----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcC
Confidence 344455554 356788999976 3 45677776665554433 3357787776665332 3556888999999
Q ss_pred CeEEEEcCc-----cHHHHhcCCCeEEEecCC
Q 008895 143 PVIAFATSS-----VVHKLAKLKHRTILIDSP 169 (549)
Q Consensus 143 ~~~ii~~~~-----~~~~~~~~~~~~~~~~~~ 169 (549)
++++|+|.- ....+......++.+++.
T Consensus 81 ~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 81 FDILIVDHYGLDADWEKLIKEFGRKILVIDDL 112 (279)
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCeEEEEecC
Confidence 999999863 223333445566777653
No 167
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=40.39 E-value=2.9e+02 Score=29.13 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=66.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++-. .+| ..+|...+...+.... .. .++++++++....+-.. .++..+++.+..|+..+..+
T Consensus 196 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 271 (547)
T PRK13295 196 PDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYA---ER-LGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD 271 (547)
T ss_pred CcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHH---HH-hCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC
Confidence 566776532 233 3578888766554432 33 67889999888776542 24556788889999877654
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
..+.+.+...+++.++..++........+
T Consensus 272 -~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 300 (547)
T PRK13295 272 -IWDPARAAELIRTEGVTFTMASTPFLTDL 300 (547)
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 56788899999999998888766555443
No 168
>PRK07638 acyl-CoA synthetase; Validated
Probab=40.06 E-value=2.3e+02 Score=29.23 Aligned_cols=85 Identities=8% Similarity=0.123 Sum_probs=60.7
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (549)
..+|...+...+...+ .. .+++++|++....+-... ++..++..+..|+..+.. +..++..+...+++.++.++
T Consensus 161 v~~s~~~~~~~~~~~~---~~-~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 235 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HD-FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVM 235 (487)
T ss_pred EEEecHHHHHHHHHHH---Hh-cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEE
Confidence 3577777765554333 33 677899998876654432 345666777889888765 56788899999999999999
Q ss_pred EEcCccHHHHh
Q 008895 147 FATSSVVHKLA 157 (549)
Q Consensus 147 i~~~~~~~~~~ 157 (549)
...+.....+.
T Consensus 236 ~~~P~~~~~l~ 246 (487)
T PRK07638 236 YTVPTMLESLY 246 (487)
T ss_pred EeCcHHHHHHH
Confidence 98887766554
No 169
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=39.83 E-value=1.1e+02 Score=30.54 Aligned_cols=59 Identities=12% Similarity=-0.023 Sum_probs=39.7
Q ss_pred HhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEE
Q 008895 85 YLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (549)
Q Consensus 85 ~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 148 (549)
.+.. +++++||.|.+-. +.+.....++...|+.+++++.+ .+.+.+...++. +.++|+.
T Consensus 62 ~l~a-l~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 62 AALL-LDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHH-cCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 3455 5789999887643 45556667778889888887643 356777777654 5666654
No 170
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.81 E-value=1.7e+02 Score=30.82 Aligned_cols=95 Identities=8% Similarity=-0.028 Sum_probs=65.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++.. .+| ..+|+..+...+..... . .++.++|++....+-.. .+...+++.+..|+..+..+
T Consensus 189 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~---~-~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 189 PDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVL---W-SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH---h-hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 567777643 223 46888888766554332 2 46688898877765432 23456778899999888775
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHK 155 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (549)
..+...+...+++.++.++...+.....
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 292 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMVVD 292 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHHHH
Confidence 4678888899999999888876655443
No 171
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=39.44 E-value=84 Score=26.16 Aligned_cols=41 Identities=5% Similarity=0.046 Sum_probs=32.6
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEcCC---CChHHHHHHHHHHcCCe
Q 008895 80 NSLASYLQNVTRLSKNDTAFVLSTN---SIEIPILYFSLLSLGVI 121 (549)
Q Consensus 80 ~~~A~~L~~~~g~~~g~~V~i~~~~---~~~~~v~~la~~~~G~~ 121 (549)
+.+++.|.+ +|+.+++.|.+++.. +.....+++.+-.+|..
T Consensus 81 ~~~~~~~~~-~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEA-KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHH-cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 467778888 899999999999865 56666777777888854
No 172
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=39.33 E-value=1.1e+02 Score=21.55 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=26.0
Q ss_pred ceEEEecCCcccccCCCccccccccCCCCeeecCceEEEecCCeEEEEc
Q 008895 390 GELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVD 438 (549)
Q Consensus 390 Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~G 438 (549)
|.+|++-.. -..|.|+..||.-++...+.+++.+
T Consensus 25 G~vWlT~~g---------------~~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREG---------------DPDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCC---------------CCCCEEECCCCEEEeCCCCEEEEEe
Confidence 899996433 1147799999999998888887765
No 173
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=39.05 E-value=1.3e+02 Score=25.80 Aligned_cols=52 Identities=19% Similarity=0.107 Sum_probs=31.8
Q ss_pred HHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCC-CCCHHHHHHHHHhcCCC
Q 008895 454 AELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHS-SLNEAEIMEFVARQVSP 510 (549)
Q Consensus 454 ~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~-~~~~~~i~~~l~~~l~~ 510 (549)
..|.+.+.+.|+|.++.++...+ +.++++-. +... ....+++++.+.+++..
T Consensus 57 ~~Ia~~v~~v~~V~dA~vvVtg~----~A~Vgv~~-~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 57 DEIASEAAKVKGVKDATVVITGN----YAYVGVDL-TNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHhcCCCCceEEEEEECC----EEEEEEEc-CCCcchhhHHHHHHHHHHHHHh
Confidence 35777888999999999997644 23344432 2222 22245677777665544
No 174
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=38.91 E-value=2.5e+02 Score=30.94 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=62.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCC--CChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~--~~~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++-. .+| ..+|...+...+..+.. . .++.++|++...+|- ...+...+++.+..|+..+..+
T Consensus 364 ~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 364 PEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---I-ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---h-hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 567776532 233 46888888766654442 2 578899998887764 3444556788889999888666
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCcc
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSV 152 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~ 152 (549)
.......+...+.+.++..+...+..
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHH
Confidence 44455666677788888777655443
No 175
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=38.05 E-value=1.4e+02 Score=21.05 Aligned_cols=51 Identities=18% Similarity=0.141 Sum_probs=33.3
Q ss_pred eChHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCC
Q 008895 451 VAPAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPY 511 (549)
Q Consensus 451 v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~ 511 (549)
-...++...|.++|+|.+|..+. ++.-..+.+.. .+.+++.+.+.+.+...
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~vt-----G~~d~~~~v~~-----~d~~~l~~~i~~~l~~~ 60 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSVT-----GEYDLILKVRA-----RDMEELEEFIREKLRSI 60 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEES-----SSSSEEEEEEE-----SSHHHHHHHHHHTHHTS
T ss_pred chHHHHHHHHHcCCCEEEEEEEe-----CCCCEEEEEEE-----CCHHHHHHHHHHHhhcC
Confidence 34678889999999999999882 22233444433 35667777766654433
No 176
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.95 E-value=2.7e+02 Score=29.66 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=64.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChH-HHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~-~v~~la~~~~G~~~v~l~~ 127 (549)
|+.++++.. .+| ..+|+..+...+..+. .... .++.+++++...++-...+ ....++.+..|+..+...+
T Consensus 180 ~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~-~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 180 ETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDS-LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred ccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhh-cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 566666543 223 3578887755443322 1223 6788899988877654332 2345677778888776666
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHH
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHK 155 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (549)
..++..+...+++.++.++...+.....
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 285 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPTLWIQ 285 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCHHHHH
Confidence 7788999999999999988876655443
No 177
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=37.95 E-value=2.9e+02 Score=24.59 Aligned_cols=89 Identities=13% Similarity=0.067 Sum_probs=53.3
Q ss_pred cEEEEecC-hhhHHHH-HHHHHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHH------HHHHHHhCCCCCCCC
Q 008895 235 AVMLFTMP-YFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPP------IVVAMSKGGSTDGYD 305 (549)
Q Consensus 235 ~~~~~~~p-l~~~~g~-~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~------~l~~l~~~~~~~~~~ 305 (549)
.+++.+.+ =.|..|. ......-..|-.++... ...++.+.+.+.+.+++++..+-+ .+..+.+..+..+.
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~- 164 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY- 164 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC-
Confidence 34444444 2677777 44455555787888665 467799999999999998765532 12333332222111
Q ss_pred CCCceEEEEecCCCCHHHHH
Q 008895 306 LSSLETVACGAAPLGKDTIM 325 (549)
Q Consensus 306 l~~lr~v~~~Ge~l~~~~~~ 325 (549)
.+++ .+++||.++++++.+
T Consensus 165 ~~~v-~i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 165 RDSV-KFMVGGAPVTQDWAD 183 (197)
T ss_pred CCCC-EEEEEChhcCHHHHH
Confidence 1122 488899999876443
No 178
>PRK07470 acyl-CoA synthetase; Validated
Probab=37.77 E-value=2.6e+02 Score=29.23 Aligned_cols=99 Identities=12% Similarity=0.094 Sum_probs=62.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCC-C
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPAN-P 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~-~ 127 (549)
++.+|++.. .+| ..+|...+...+......+. .+..++|++....+-+..+-...+..+..|+..+.++ .
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM--PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc--cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 566776643 223 35788887544332222221 1567888888887766444333344455565555443 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
..+.+.+...+++.++.++...+.....+
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 268 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKML 268 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHH
Confidence 57888999999999999999888776654
No 179
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=37.09 E-value=2.2e+02 Score=29.31 Aligned_cols=70 Identities=9% Similarity=-0.095 Sum_probs=45.8
Q ss_pred ceecHHHHHHHHHHH--------------HHHhHHhcCCCCCCEEEEEcCCCChHHHHHHH-HHHcCCeEccC-------
Q 008895 68 LRVSFSEFTRRTNSL--------------ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS-LLSLGVIISPA------- 125 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~--------------A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la-~~~~G~~~v~l------- 125 (549)
..-||.+|.+.+..+ |..|....++++||.| .+..++...-+ +...|++++=+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccc
Confidence 445777777765433 4444333689999965 44555555555 78888877633
Q ss_pred -------CCCCCHHHHHHHHhhcC
Q 008895 126 -------NPVNTESEISRQIQLSN 142 (549)
Q Consensus 126 -------~~~~~~~~l~~~l~~~~ 142 (549)
.-+.+.+.++..++...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 33578999999987643
No 180
>PRK07529 AMP-binding domain protein; Validated
Probab=36.63 E-value=2.3e+02 Score=30.71 Aligned_cols=98 Identities=16% Similarity=0.051 Sum_probs=65.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++.. .+| ..+|++.+...+...+. ..++.+++++...++-. ...+..+++.+..|+..+...
T Consensus 212 ~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~ 287 (632)
T PRK07529 212 PDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL----LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLAT 287 (632)
T ss_pred cCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH----hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecC
Confidence 577776643 222 46888888765544432 25668899988777643 344556788889998887766
Q ss_pred CC-C-C---HHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 127 PV-N-T---ESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 127 ~~-~-~---~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
+. + + ...+...+++.++.+++..+.....+.
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 323 (632)
T PRK07529 288 PQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALL 323 (632)
T ss_pred ccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHH
Confidence 42 1 1 356778899999999998776665543
No 181
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=36.41 E-value=1.3e+02 Score=31.47 Aligned_cols=78 Identities=12% Similarity=-0.021 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhHHhcCCCCCCEEEEEcC--CCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH
Q 008895 76 TRRTNSLASYLQNVTRLSKNDTAFVLST--NSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV 153 (549)
Q Consensus 76 ~~~a~~~A~~L~~~~g~~~g~~V~i~~~--~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (549)
+.+.-++|..+..-.|.++.|+|-+.+| ++...++.+-+|+..|+++| +...++....-.-..+.++.++-.-.+..
T Consensus 264 h~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~QYIGElc 342 (649)
T KOG1179|consen 264 HLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQYIGELC 342 (649)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeeehHHHHH
Confidence 3455566664433379999999998876 67788888999999999877 67889999999989999988886544433
Q ss_pred H
Q 008895 154 H 154 (549)
Q Consensus 154 ~ 154 (549)
.
T Consensus 343 R 343 (649)
T KOG1179|consen 343 R 343 (649)
T ss_pred H
Confidence 3
No 182
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=35.97 E-value=2e+02 Score=28.43 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCC---------CCHHHHHHHHhhcCC
Q 008895 73 SEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV---------NTESEISRQIQLSNP 143 (549)
Q Consensus 73 ~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~---------~~~~~l~~~l~~~~~ 143 (549)
.++......++..|.+ . +| |.|.++. +..+.+++.+|+...++.++-+... .+.+..++++++..-
T Consensus 50 ~~~~~~~~~~~~~~~~-~--~P-d~Vlv~G-D~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 50 KSTGLAIIELADVLER-E--KP-DAVLVLG-DRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHHHHH-H--T--SEEEEET-TSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHHHHh-c--CC-CEEEEEc-CCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhhhh
Confidence 6677778888888887 3 44 6666555 7899999999999999999988765 678888888888876
Q ss_pred eEEEEcCccHHHHhcCCC---eEEEecCCchhhhhc
Q 008895 144 VIAFATSSVVHKLAKLKH---RTILIDSPEFDSMTM 176 (549)
Q Consensus 144 ~~ii~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 176 (549)
-.....+...+++.+.+. ++.+++.+.++.+..
T Consensus 125 lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~ 160 (346)
T PF02350_consen 125 LHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQ 160 (346)
T ss_dssp EEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHH
T ss_pred hhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHH
Confidence 666666666677765544 477777776666643
No 183
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=35.75 E-value=1.5e+02 Score=29.49 Aligned_cols=58 Identities=12% Similarity=-0.022 Sum_probs=38.5
Q ss_pred hHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEE
Q 008895 86 LQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (549)
Q Consensus 86 L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 148 (549)
+.. .++++||.|.+-.+ .+.....++...|+.++.++.+ .+.+.+...++. +.++|+.
T Consensus 63 l~~-~~~~~Gd~Viv~~~---t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 63 ALL-LDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HHH-hCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 344 56789998877543 3445556677889888777532 457888887755 5666653
No 184
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=35.75 E-value=2.6e+02 Score=30.26 Aligned_cols=99 Identities=11% Similarity=0.089 Sum_probs=65.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh--HHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~--~~v~~la~~~~G~~~v~l~ 126 (549)
++.++++-. .+| ..+|.+.+.. .++..+....+++++|++....+-+.. +...+++.+..|+..+..+
T Consensus 231 ~~~~a~ilyTSGTTG~PKgV~~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~ 307 (628)
T TIGR02316 231 SNEPSYILYTSGTTGKPKGVQRDVGGYAV---ALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYE 307 (628)
T ss_pred CCCcEEEEECCCCCCCCceEEECCcHHHH---HHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeC
Confidence 566776542 233 3466555432 223333333578999988777665543 2456788899999888765
Q ss_pred C---CCCHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 127 P---VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 127 ~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
. ..++..+..++++.++.++.+.+.....+.
T Consensus 308 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 341 (628)
T TIGR02316 308 GLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLK 341 (628)
T ss_pred CCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 3 345788899999999999998887666543
No 185
>PLN02565 cysteine synthase
Probab=35.17 E-value=2.7e+02 Score=27.17 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=59.5
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcC-CCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHH
Q 008895 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (549)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g-~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~ 136 (549)
++.+-.+..+-+-||++= -+..+-..+.+ .| +.+|....+....+-.-...-++|-.+|..+..+=|...+.....
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~-~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 107 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEE-KGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRI 107 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHH-cCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHH
Confidence 455554433445566653 22233333444 35 478855555556666777777788889988888777667777788
Q ss_pred HHhhcCCeEEEEcCc
Q 008895 137 QIQLSNPVIAFATSS 151 (549)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (549)
.++..++++++++..
T Consensus 108 ~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 108 ILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999998763
No 186
>PRK06164 acyl-CoA synthetase; Validated
Probab=34.82 E-value=3e+02 Score=28.91 Aligned_cols=96 Identities=13% Similarity=0.094 Sum_probs=66.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC-hHHHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~-~~~v~~la~~~~G~~~v~l~~ 127 (549)
++.++++.. .+| ..+|...+...+..++.. +++.+++++...++-+. -.+..+++.+..|+..+.. +
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARA----YGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHh----cCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 466676642 222 367888887666544433 46788999988776542 2235677888889887765 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
......+...+++.++..++..+.....+
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l~~l 283 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEMLRRI 283 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHHHHH
Confidence 56788899999999999988777666554
No 187
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=34.45 E-value=1.1e+02 Score=26.64 Aligned_cols=51 Identities=20% Similarity=0.194 Sum_probs=32.0
Q ss_pred hHHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCC
Q 008895 453 PAELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVS 509 (549)
Q Consensus 453 ~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~ 509 (549)
...|+..+.+.++|.++.|+...+ +..+++-+. .. ....+++++.+.+.+.
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~~----~a~Vav~~~-~~-~~~~~~i~~~V~~~v~ 127 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTDD----NAYVAVDLD-FN-RFNTKKIKKKVEKAVK 127 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEECC----EEEEEEEec-cc-ccchhHHHHHHHHHHH
Confidence 456888899999999999997643 344444443 22 3444555555555443
No 188
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=33.58 E-value=3.4e+02 Score=28.37 Aligned_cols=96 Identities=13% Similarity=0.131 Sum_probs=64.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH--H-HHHHHHHcCCeEccC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP--I-LYFSLLSLGVIISPA 125 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~--v-~~la~~~~G~~~v~l 125 (549)
++.+|++-. .+| ..+|...+...+.... .. .++.++|++...+|....+- . ..++++..|+..+..
T Consensus 182 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 182 SDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EI-CWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hh-cCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 677777643 222 4578888776655433 33 57788999888776543322 2 367888889887654
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
+...+..+...+++.++.++.........+
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 445677888889999999888877665543
No 189
>PLN02574 4-coumarate--CoA ligase-like
Probab=33.55 E-value=3.6e+02 Score=28.57 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=63.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEE-EcCCC--ChHHHHHHHHHHcCCeEccC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFV-LSTNS--IEIPILYFSLLSLGVIISPA 125 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i-~~~~~--~~~~v~~la~~~~G~~~v~l 125 (549)
++.+|++.. .+| ..+|++.+...+..+........+...++.+.+ .++-. .-+...+++.+..|+..+..
T Consensus 197 ~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 276 (560)
T PLN02574 197 QDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVM 276 (560)
T ss_pred cCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEe
Confidence 566776643 223 468999988877766654433133333444443 33322 12223455677789888766
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
+ ..+.+.+...+++.++.++.........+.
T Consensus 277 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 307 (560)
T PLN02574 277 R-RFDASDMVKVIDRFKVTHFPVVPPILMALT 307 (560)
T ss_pred c-CCCHHHHHHHHHHcCCeEEecCCHHHHHHH
Confidence 5 567899999999999999888777665543
No 190
>PLN02614 long-chain acyl-CoA synthetase
Probab=32.19 E-value=2.6e+02 Score=30.53 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=66.4
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHH-hcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQN-VTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPA 125 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~-~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l 125 (549)
|+.+|++-. .+| ..+|.+.+...+..+...+.. ..++.++|++..++|-+ .+.. ..+.++..|+..+..
T Consensus 222 ~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~ 300 (666)
T PLN02614 222 KSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFW 300 (666)
T ss_pred CCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEe
Confidence 667776532 233 468998888776655544421 02578889988887754 3443 345566788877665
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
. .++..+...++..++.+++.-+.....+
T Consensus 301 ~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l 329 (666)
T PLN02614 301 R--GDVKLLIEDLGELKPTIFCAVPRVLDRV 329 (666)
T ss_pred C--CCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 3 3678899999999999999887766654
No 191
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=32.10 E-value=75 Score=28.25 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=29.5
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEc
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLS 102 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~ 102 (549)
.-+||.++++.+..+|..+.+ -|.+|.-.|+|.-
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~-s~~~PDvIiaiaR 38 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRA-SGFKPDVIVAIAR 38 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHH-cCCCCCEEEEEcC
Confidence 468999999999999999998 7999987776653
No 192
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.90 E-value=3.9e+02 Score=28.21 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=67.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++.. .+| ..+|++.+...+..+...+.. .+++.|++...+|-. .-+...+++.+..|+..+...
T Consensus 170 ~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~--~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 170 PDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGG--GLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcc--cCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 677777642 222 468999998887776666653 278888866666543 566667888888999888887
Q ss_pred C-CCCHHHHHHHHhhcCCeEEEEcCccH
Q 008895 127 P-VNTESEISRQIQLSNPVIAFATSSVV 153 (549)
Q Consensus 127 ~-~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (549)
+ .++.+.+...+...++..+..-+...
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~ 275 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFL 275 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHH
Confidence 6 68888888888887755555444433
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=31.66 E-value=2.7e+02 Score=32.70 Aligned_cols=97 Identities=12% Similarity=0.128 Sum_probs=68.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++.. .+| ..+|.+.+...+..... . .++.++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 781 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 781 PDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---V-FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---h-cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 677777643 223 46888888766655432 3 5678899887766532 333444677788898888776
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
...+.+.+.+.+++.++.++...+.....+
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 886 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLY 886 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHH
Confidence 667888999999999999999887766544
No 194
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=31.21 E-value=3.4e+02 Score=25.98 Aligned_cols=90 Identities=12% Similarity=0.014 Sum_probs=54.9
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcC-CCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHH
Q 008895 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (549)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g-~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~ 136 (549)
++.+-.+..+.+-++++--.. ..+.. ..+ .| +.+|+.| +....+..-...-+++.+.|..+..+-|.........
T Consensus 22 ~i~~K~E~~nptGS~K~R~a~-~~l~~-a~~-~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~ 97 (298)
T TIGR01139 22 NVFVKLEGRNPSGSVKDRIAL-NMIWD-AEK-RGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRK 97 (298)
T ss_pred eEEEEEcccCCCCcchHHHHH-HHHHH-HHH-cCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHH
Confidence 455555433334444442222 23333 333 35 4777777 4555566666666777788988777666554455577
Q ss_pred HHhhcCCeEEEEcCc
Q 008895 137 QIQLSNPVIAFATSS 151 (549)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (549)
.++..++.+++++..
T Consensus 98 ~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 98 LLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCEEEEECCC
Confidence 889999999998764
No 195
>COG0043 UbiD 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism]
Probab=31.04 E-value=2.8e+02 Score=28.67 Aligned_cols=37 Identities=16% Similarity=0.041 Sum_probs=24.2
Q ss_pred EEcccCCeeeeCcEeeChHHHHHHHHcCCCcceEEEE
Q 008895 436 IVDRLKDLIKYKGYQVAPAELEHLLLSHREVADAAVI 472 (549)
Q Consensus 436 ~~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv 472 (549)
+.||--+.-.+-|..++..-...+=.+.|.|.++..-
T Consensus 307 ~~G~pp~e~~~mG~~~e~~~~p~~~~~~Pev~d~~lp 343 (477)
T COG0043 307 VPGKPPHEDALMGVALEEIFLPLLKKQVPEVVDVRLP 343 (477)
T ss_pred cCCCCcchhhhhhhhhhHHHHHHHHHhCCCeEEEEcC
Confidence 5666666555567776666566555568988876554
No 196
>PLN02409 serine--glyoxylate aminotransaminase
Probab=30.33 E-value=3.8e+02 Score=26.99 Aligned_cols=76 Identities=12% Similarity=-0.028 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH-HHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 008895 73 SEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP-ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (549)
Q Consensus 73 ~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~-v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (549)
.++.+..+.+...|.+.+|...++.|.+.. ++...+ .++..++..|-.++..++.........+++..+.+++...
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~-~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTKSGTPFIFPT-TGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEeC-CcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 344555556666666545665555444444 443333 3334455566655555555544555566666666666543
No 197
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=30.00 E-value=4.3e+02 Score=25.31 Aligned_cols=91 Identities=11% Similarity=-0.005 Sum_probs=54.8
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHH
Q 008895 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (549)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~ 137 (549)
++.+-.+....+-+|+. +.....+...+.+ .-+.+|+.|. ....+..-...-++|...|..+..+=|...+......
T Consensus 23 ~i~~K~E~~~ptGS~K~-R~a~~~~~~a~~~-g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~ 99 (299)
T TIGR01136 23 RVLAKLEGRNPSGSVKD-RIALSMIEDAEKR-GLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKL 99 (299)
T ss_pred eEEEEEcccCCCCCccH-HHHHHHHHHHHHc-CCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 44444443233445554 2223334433333 2246777664 5556666667777778889887776665544555678
Q ss_pred HhhcCCeEEEEcCc
Q 008895 138 IQLSNPVIAFATSS 151 (549)
Q Consensus 138 l~~~~~~~ii~~~~ 151 (549)
++..++++++++..
T Consensus 100 ~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 100 LRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCEEEEeCCC
Confidence 89999999998754
No 198
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=29.97 E-value=1.8e+02 Score=19.77 Aligned_cols=45 Identities=18% Similarity=0.163 Sum_probs=29.6
Q ss_pred HHHHHHHHcCCCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHh
Q 008895 454 AELEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVAR 506 (549)
Q Consensus 454 ~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~ 506 (549)
..|+++|.++|+|.++.+-.. .. .+.|...+.. .+.++|.+.+++
T Consensus 14 ~~v~~~l~~~~GV~~v~vd~~-----~~--~v~v~~~~~~-~~~~~i~~~i~~ 58 (62)
T PF00403_consen 14 KKVEKALSKLPGVKSVKVDLE-----TK--TVTVTYDPDK-TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHTSTTEEEEEEETT-----TT--EEEEEESTTT-SCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEECC-----CC--EEEEEEecCC-CCHHHHHHHHHH
Confidence 569999999999977766421 11 2333334332 677889988876
No 199
>PRK07787 acyl-CoA synthetase; Validated
Probab=29.82 E-value=4.1e+02 Score=27.25 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=64.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCC--CChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~--~~~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++-. .+| ..+|+..+...+..++. . .++.+++++....+- ...+...+++.+..|+.++..+
T Consensus 127 ~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 127 PDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAE---A-WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHH---h-cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 566766542 222 35788888776555443 3 567888887665543 2345667889999999988765
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
..+++.+...++ .++..+...+.....+
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~~~~~l 230 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPTVWSRI 230 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchHHHHHH
Confidence 457888888888 8888877766655444
No 200
>PRK11761 cysM cysteine synthase B; Provisional
Probab=29.71 E-value=4.6e+02 Score=25.17 Aligned_cols=89 Identities=13% Similarity=0.036 Sum_probs=57.1
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcC-CCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHH
Q 008895 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (549)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g-~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~ 136 (549)
++.+-.+....+=||++ +-+..+...+.+ .| +.+|+.|.. ...+..-...-++|...|..+..+=|...+.....
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~-~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 103 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEK-RGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRA 103 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHH-cCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 45555543344556665 223333333444 35 467777654 45566677777788889988777666655566777
Q ss_pred HHhhcCCeEEEEcC
Q 008895 137 QIQLSNPVIAFATS 150 (549)
Q Consensus 137 ~l~~~~~~~ii~~~ 150 (549)
.++..++++++++.
T Consensus 104 ~~~~~GA~v~~~~~ 117 (296)
T PRK11761 104 AMRAYGAELILVPK 117 (296)
T ss_pred HHHHcCCEEEEeCC
Confidence 88999999999986
No 201
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=29.21 E-value=4.1e+02 Score=24.84 Aligned_cols=78 Identities=10% Similarity=0.145 Sum_probs=46.8
Q ss_pred cHHHHHH-HHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHc------C--CeEccCCCC---CCHHHHHHHH
Q 008895 71 SFSEFTR-RTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL------G--VIISPANPV---NTESEISRQI 138 (549)
Q Consensus 71 Ty~el~~-~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~------G--~~~v~l~~~---~~~~~l~~~l 138 (549)
++..+.+ ..+++.+.+.+..-+.+|++|++.+.-+.+.++++..+... | ..++-++.. ++.+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3444444 34555666776334678999999999999998887766442 2 344445543 2344445555
Q ss_pred hhcCCeEEEE
Q 008895 139 QLSNPVIAFA 148 (549)
Q Consensus 139 ~~~~~~~ii~ 148 (549)
+..+..+.+.
T Consensus 84 ~~lgI~~~v~ 93 (258)
T PRK10696 84 ESLGVPYHIE 93 (258)
T ss_pred HHhCCCEEEE
Confidence 5555554443
No 202
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=28.97 E-value=1.8e+02 Score=24.17 Aligned_cols=114 Identities=11% Similarity=-0.003 Sum_probs=0.0
Q ss_pred CCCCcEEEEecCh-hhHHHH-HHHHHHhhhccEEEEecC-cCHHHHHHHHHHhceeeeeec---HHHHHHHHhCCCCCCC
Q 008895 231 RVSPAVMLFTMPY-FHIYGL-FFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVT---PPIVVAMSKGGSTDGY 304 (549)
Q Consensus 231 ~~~~~~~~~~~pl-~~~~g~-~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~---P~~l~~l~~~~~~~~~ 304 (549)
++...+++...+. .|..|. ......-..|..++.... ..++++.+.+.+++++++..+ +.....+.+....-..
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Q ss_pred C-CCCceEEEEecCCCCHHHHHHHHHhCCCCcEEcccCccc
Q 008895 305 D-LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTE 344 (549)
Q Consensus 305 ~-l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~~~yG~tE 344 (549)
. ++.++.++-|.-..+.+......+.+...-+-..|+...
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~~~vf~~~~ 121 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGFDRVFPPGT 121 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHcCCCEEECcCC
No 203
>PRK07239 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; Validated
Probab=28.87 E-value=1.5e+02 Score=29.65 Aligned_cols=49 Identities=8% Similarity=0.022 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhh---cCCeEEEE
Q 008895 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQL---SNPVIAFA 148 (549)
Q Consensus 94 ~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~---~~~~~ii~ 148 (549)
.+-+|+.+.+.+.+.+- ..|..+..++...+.+.+...+.. .+.++++.
T Consensus 97 ~~~~i~aVG~~Ta~aL~------~~G~~~~~~p~~~~~e~L~~~l~~~~~~g~~vli~ 148 (381)
T PRK07239 97 SSARLLARGPKATGAIR------AAGLREEWSPASESSAEVLEYLLEEGVAGKRIAVQ 148 (381)
T ss_pred cCCeEEEECccHHHHHH------HcCCCCccCCCCCccHHHHHHHhcCCCCCCEEEEE
Confidence 35567777776655433 678766666667777777777654 34455664
No 204
>PRK09274 peptide synthase; Provisional
Probab=28.69 E-value=3.7e+02 Score=28.25 Aligned_cols=98 Identities=10% Similarity=0.014 Sum_probs=61.5
Q ss_pred CCCEEEEEccCCCC-CccchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC
Q 008895 191 QSDVAAIMYSSGTT-GRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (549)
Q Consensus 191 ~~~~a~i~~TSGtT-G~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~ 267 (549)
++.++++....+++ ...+...+|.+++...+......+ .+..+++++...++-... .....++++..|+..+.+.+
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEEEEcCC
Confidence 44555544322221 112233578887765554433333 256778888877765432 33556788889998888764
Q ss_pred -cCHHHHHHHHHHhceeeeeecH
Q 008895 268 -FDLKMMLKAVEEFRVTHAAVTP 289 (549)
Q Consensus 268 -~~~~~~~~~l~~~~~t~l~~~P 289 (549)
...+++...+++.++..++..+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 5678888889999998887754
No 205
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=28.44 E-value=4.4e+02 Score=23.89 Aligned_cols=91 Identities=12% Similarity=0.158 Sum_probs=0.0
Q ss_pred CCCcEEEEecC-hhhHHHH-HHHHHHhhhccEEEEecC-cCHHHHHHHHHHhceeeeeecHHH------HHHHHhCCCCC
Q 008895 232 VSPAVMLFTMP-YFHIYGL-FFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPI------VVAMSKGGSTD 302 (549)
Q Consensus 232 ~~~~~~~~~~p-l~~~~g~-~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~P~~------l~~l~~~~~~~ 302 (549)
....+++.+.+ =.|..|. ......-..|-.++.... ..++.+.+.+.+.+++++..+-.. +..+++..+..
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred CCCCCCceEEEEecCCCCHHHHHH
Q 008895 303 GYDLSSLETVACGAAPLGKDTIMA 326 (549)
Q Consensus 303 ~~~l~~lr~v~~~Ge~l~~~~~~~ 326 (549)
+.+.. +++||.+++++..+.
T Consensus 167 ~~~~~----i~vGG~~~~~~~~~~ 186 (213)
T cd02069 167 GIKIP----LLIGGAATSRKHTAV 186 (213)
T ss_pred CCCCe----EEEEChhcCHHHHhh
No 206
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=28.10 E-value=3.3e+02 Score=27.88 Aligned_cols=57 Identities=9% Similarity=0.082 Sum_probs=31.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHH----HHHHHHhhcCCeEEEEcC
Q 008895 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTES----EISRQIQLSNPVIAFATS 150 (549)
Q Consensus 93 ~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~----~l~~~l~~~~~~~ii~~~ 150 (549)
-.|.+|+|..+.+..+-++-+-. .+|+.++.+....... .+...+.......++++.
T Consensus 298 l~gkrv~v~g~~~~~~~l~~~L~-elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 298 NFGRKAAIYGEPDFVVAITRFVL-ENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred cCCCEEEEEcCHHHHHHHHHHHH-HCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 35788999886543333333333 5788765554433322 333445555666666654
No 207
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=27.97 E-value=3.6e+02 Score=28.26 Aligned_cols=96 Identities=10% Similarity=0.062 Sum_probs=65.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH---HHHHHHHHcCCeEccC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP---ILYFSLLSLGVIISPA 125 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~---v~~la~~~~G~~~v~l 125 (549)
++.+|++.. .+| ..+|.+.+...+.... .. .++.+++++...+|-...+- ..+++++..|+..+..
T Consensus 181 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~---~~-~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 181 ADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EI-CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHH---Hh-cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 567776532 223 4688888877666533 33 67889999988776554332 2468888899887765
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
. ..+.......+++.++.++...+.....+
T Consensus 257 ~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 286 (536)
T PRK10946 257 P-DPSATLCFPLIEKHQVNVTALVPPAVSLW 286 (536)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEeChHHHHHH
Confidence 4 45677778889999988888776655444
No 208
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=27.76 E-value=6.1e+02 Score=26.12 Aligned_cols=96 Identities=17% Similarity=0.089 Sum_probs=64.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC-hHHHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~-~~~v~~la~~~~G~~~v~l~~ 127 (549)
++..+++.. .+| ..+|.+.+...+..+. ...++..++++....+-.. ..+..+++++..|+..+..++
T Consensus 140 ~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~----~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 215 (502)
T TIGR01734 140 GDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWML----ADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDK 215 (502)
T ss_pred CCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHH----HhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCH
Confidence 555665533 222 4688888876555433 2257788888777665543 334567788999999988875
Q ss_pred C--CCHHHHHHHHhhcCCeEEEEcCccHHH
Q 008895 128 V--NTESEISRQIQLSNPVIAFATSSVVHK 155 (549)
Q Consensus 128 ~--~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (549)
. .+...+...+...++..+...+.....
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~ 245 (502)
T TIGR01734 216 DITNNFKLLFEELPKTGLNVWVSTPSFVDM 245 (502)
T ss_pred HHhcCHHHHHHHHHHcCCeEEEEChhHHHH
Confidence 4 467788888889988888877665543
No 209
>PLN03052 acetate--CoA ligase; Provisional
Probab=27.73 E-value=4.4e+02 Score=29.21 Aligned_cols=99 Identities=10% Similarity=0.025 Sum_probs=65.4
Q ss_pred CCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEec-
Q 008895 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (549)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~- 266 (549)
.++.+|++....+..+.+ ...+|.+.+...+......+ .+..++|++...+|-.-- .....+.+...|+..+.+.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e-~via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH-AVIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCCEEEeeCC
Confidence 346666654433221211 13467777755554433332 257888999888886532 3456778888899888875
Q ss_pred CcCHHHHHHHHHHhceeeeeecHH
Q 008895 267 RFDLKMMLKAVEEFRVTHAAVTPP 290 (549)
Q Consensus 267 ~~~~~~~~~~l~~~~~t~l~~~P~ 290 (549)
.+..+++...+++.++..++....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 478899999999999999887654
No 210
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=27.51 E-value=4.8e+02 Score=28.68 Aligned_cols=102 Identities=11% Similarity=-0.031 Sum_probs=67.9
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeee
Q 008895 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (549)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~ 287 (549)
.+|.+.+...+..+...+ -+..+++++...++-..- .+...++++..|+..+.+. .+..+++...|++.++.+++.
T Consensus 106 ~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~ 184 (696)
T PLN02387 106 WITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVIC 184 (696)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEE
Confidence 357776655544433322 156778887776664432 2355677888899888775 478899999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCceEEEEecC
Q 008895 288 TPPIVVAMSKGGSTDGYDLSSLETVACGAA 317 (549)
Q Consensus 288 ~P~~l~~l~~~~~~~~~~l~~lr~v~~~Ge 317 (549)
....+..+..... .++.++.+++-++
T Consensus 185 ~~~~~~~l~~~~~----~~~~l~~ii~~~~ 210 (696)
T PLN02387 185 DSKQLKKLIDISS----QLETVKRVIYMDD 210 (696)
T ss_pred CHHHHHHHHHHhh----ccCCceEEEEECC
Confidence 8877776654321 2455666665443
No 211
>PLN03013 cysteine synthase
Probab=27.37 E-value=5.2e+02 Score=26.41 Aligned_cols=82 Identities=12% Similarity=0.019 Sum_probs=53.6
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAF 147 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 147 (549)
-+-++++= -....+.. +.++..+++|....+....+..-+..-++|...|..+..+=|...+......++..++.+++
T Consensus 149 PtGSfKdR-~A~~~l~~-a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 149 PCCSVKDR-IGYSMVTD-AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred CccccHHH-HHHHHHHH-HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 34556652 22222333 33313357885555666667777777778888998777766666666777888999999999
Q ss_pred EcCc
Q 008895 148 ATSS 151 (549)
Q Consensus 148 ~~~~ 151 (549)
++..
T Consensus 227 v~~~ 230 (429)
T PLN03013 227 TDPA 230 (429)
T ss_pred ECCC
Confidence 8754
No 212
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=26.56 E-value=4.6e+02 Score=23.35 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhccCCCCCCCcEEEEecC-hhhHHHH-HHHHHHhhhccEEEEecC-cCHHHHHHHHHHhceeeeeecH--
Q 008895 215 RNLTAAVASSFASSPKRVSPAVMLFTMP-YFHIYGL-FFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTP-- 289 (549)
Q Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~p-l~~~~g~-~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~P-- 289 (549)
+..+..+..............+++.+.+ =.|..|. ......-..|-.++.... ..++.+.+.+.+.+++++..+-
T Consensus 64 ~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~ 143 (201)
T cd02070 64 KAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM 143 (201)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Q ss_pred ----HHHHHHHhCCCCCCC--CCCCceEEEEecCCCCHHHHHHH
Q 008895 290 ----PIVVAMSKGGSTDGY--DLSSLETVACGAAPLGKDTIMAF 327 (549)
Q Consensus 290 ----~~l~~l~~~~~~~~~--~l~~lr~v~~~Ge~l~~~~~~~~ 327 (549)
..+..+.+..+.... +. .+++||.+++++..+.+
T Consensus 144 ~~~~~~~~~~i~~lr~~~~~~~~----~i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 144 TTTMGGMKEVIEALKEAGLRDKV----KVMVGGAPVNQEFADEI 183 (201)
T ss_pred cccHHHHHHHHHHHHHCCCCcCC----eEEEECCcCCHHHHHHc
No 213
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=26.40 E-value=4e+02 Score=28.03 Aligned_cols=85 Identities=12% Similarity=-0.005 Sum_probs=60.8
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC-cCHHHHHHHHHHhceeeeee
Q 008895 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (549)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~l~~ 287 (549)
.+|...+...+......+ .+..+++++....+-...+ +...+.++..|+..+.+.+ ...+++...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 467777765555444433 2467788888776665432 4667888889999888764 67789999999999999998
Q ss_pred cHHHHHHHH
Q 008895 288 TPPIVVAMS 296 (549)
Q Consensus 288 ~P~~l~~l~ 296 (549)
.......+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 877665543
No 214
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=26.26 E-value=5e+02 Score=27.72 Aligned_cols=94 Identities=12% Similarity=0.109 Sum_probs=62.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
++.++++.. .+| ..+|...+...+..+... .++.++|++....|-.. -+...+++.+..|+..+. .
T Consensus 198 ~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~ 272 (600)
T PRK08279 198 AKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGL----LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-R 272 (600)
T ss_pred ccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHh----cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-c
Confidence 456666532 233 468888887766655433 56789999988776543 334455666777777665 4
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVH 154 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (549)
+..+...+...+.+.++.++........
T Consensus 273 ~~~~~~~~~~~i~~~~~t~~~~~p~l~~ 300 (600)
T PRK08279 273 RKFSASRFWDDVRRYRATAFQYIGELCR 300 (600)
T ss_pred CCCCHHHHHHHHHHhcceEEeehHHHHH
Confidence 5677788888889999888876554443
No 215
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=26.01 E-value=86 Score=25.15 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=42.5
Q ss_pred ecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHH--HHHHHc-CCeEccC
Q 008895 70 VSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY--FSLLSL-GVIISPA 125 (549)
Q Consensus 70 ~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~--la~~~~-G~~~v~l 125 (549)
=|-+++.+.+..+-..+.++.++.+.|.|.+++.-+.++-.+| .|+=.. |...||+
T Consensus 13 nt~e~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA~aaR~~~Gw~~Vpl 71 (117)
T TIGR01796 13 NEAEEIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFPAAAARGLPGWTDVPV 71 (117)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChHHHHHhccCCCCcce
Confidence 3568999999999888887789999999999887776655544 455555 7777765
No 216
>PLN02736 long-chain acyl-CoA synthetase
Probab=25.88 E-value=5.2e+02 Score=28.02 Aligned_cols=100 Identities=11% Similarity=-0.036 Sum_probs=67.7
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEec-CcCHHHHHHHHHHhceeeeee
Q 008895 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (549)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~ 287 (549)
.+|.+.+...+..+...+ .+..++|++...++-..- .....++++..|+..+.+. ....+++...+++.+++.+++
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~ 156 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPE-WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFC 156 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEE
Confidence 367777765554433332 257788888777665433 2245677888899888775 467899999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCceEEEEe
Q 008895 288 TPPIVVAMSKGGSTDGYDLSSLETVACG 315 (549)
Q Consensus 288 ~P~~l~~l~~~~~~~~~~l~~lr~v~~~ 315 (549)
.+..+..+..... .++.++.++..
T Consensus 157 ~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 157 VPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred CHHHHHHHHHHhh----cCCCceEEEEE
Confidence 8877666544321 23556666654
No 217
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=25.78 E-value=32 Score=16.63 Aligned_cols=9 Identities=33% Similarity=0.726 Sum_probs=6.5
Q ss_pred ccCcccccc
Q 008895 339 AYGLTESTA 347 (549)
Q Consensus 339 ~yG~tE~~~ 347 (549)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 218
>PRK06839 acyl-CoA synthetase; Validated
Probab=25.74 E-value=7.4e+02 Score=25.40 Aligned_cols=96 Identities=15% Similarity=0.116 Sum_probs=62.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh--HHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~--~~v~~la~~~~G~~~v~l~ 126 (549)
++.++++.. .+| ..+|...+...+.. .... .++.++|++...++-... +....++++..|+..+. .
T Consensus 148 ~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~---~~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~-~ 222 (496)
T PRK06839 148 ESASFIICYTSGTTGKPKGAVLTQENMFWNALN---NTFA-IDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIV-P 222 (496)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHH---HHHH-cCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEE-c
Confidence 566776643 222 35788877543332 2344 678899998887764432 22334667777877654 4
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
...+++.+...+++.++.++...+.....+
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 252 (496)
T PRK06839 223 RKFEPTKALSMIEKHKVTVVMGVPTIHQAL 252 (496)
T ss_pred cCCCHHHHHHHHHhhCCeEEEehHHHHHHH
Confidence 567788889999999999988777666554
No 219
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=25.73 E-value=2.8e+02 Score=30.07 Aligned_cols=67 Identities=10% Similarity=-0.019 Sum_probs=49.6
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCC---CCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 90 TRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 90 ~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
.++.++|++..+.+.+......+++.+..|+..+..+. ..+++.+..++++.++.++.+.......+
T Consensus 300 ~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 369 (655)
T PRK03584 300 CDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDAC 369 (655)
T ss_pred cCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHH
Confidence 57889999887766554444456788999999887653 24678899999999999887776655544
No 220
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=25.62 E-value=3.8e+02 Score=29.16 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=65.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHH-hcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQN-VTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPA 125 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~-~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l 125 (549)
|+.+|++.. .+| ..+|...+...+..+...+.- ...+.++|++..++|-. .+... .+.++..|+..+..
T Consensus 219 ~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~ 297 (660)
T PLN02861 219 KTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFW 297 (660)
T ss_pred CCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEe
Confidence 677776543 222 468988888777666554321 02357788888877654 34343 34467888887655
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
. .+...+...++..++.+++.-+.....+
T Consensus 298 ~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l 326 (660)
T PLN02861 298 Q--GDIRYLMEDVQALKPTIFCGVPRVYDRI 326 (660)
T ss_pred C--CCHHHHHHHHHHhCCcEEeechHHHHHH
Confidence 3 4678899999999999999888776655
No 221
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=25.57 E-value=28 Score=24.24 Aligned_cols=7 Identities=57% Similarity=1.241 Sum_probs=6.1
Q ss_pred CeeecCc
Q 008895 418 GWMRTGD 424 (549)
Q Consensus 418 ~~~~TGD 424 (549)
.||.|||
T Consensus 73 hwydtgd 79 (80)
T PF05452_consen 73 HWYDTGD 79 (80)
T ss_pred ccccCCC
Confidence 4999998
No 222
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=25.42 E-value=2e+02 Score=25.31 Aligned_cols=48 Identities=8% Similarity=-0.111 Sum_probs=34.6
Q ss_pred CceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHH
Q 008895 67 GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (549)
Q Consensus 67 ~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~ 116 (549)
..-+||.|+.+.+.++|..|.+..+. ...+.+...++-..++..+|-.
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~~~~--~~~viV~i~~gg~~~A~~La~~ 61 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITADLAD--ENPLVLCVMGGGLVFTGQLLPR 61 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHHcCC--CCeEEEEECCCcHHHHHHHHHH
Confidence 46789999999999999999984332 2345566667766666666643
No 223
>PRK13388 acyl-CoA synthetase; Provisional
Probab=25.16 E-value=6.2e+02 Score=26.56 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=59.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++.. .+| ..+|...+...+..+. .. .+++++|++....+-.. .+...+++.+..|+..+. .
T Consensus 149 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~ 223 (540)
T PRK13388 149 AMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALT---ER-FGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-P 223 (540)
T ss_pred CCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHH---HH-hCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-C
Confidence 577777643 223 3578887765444432 33 67899999887765432 233344556777877654 4
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVV 153 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (549)
+..+...+...+++.++.++.......
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~p~~l 250 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYVGKPL 250 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHH
Confidence 556788888899999988876544433
No 224
>PRK07788 acyl-CoA synthetase; Validated
Probab=24.95 E-value=2.6e+02 Score=29.48 Aligned_cols=83 Identities=6% Similarity=-0.027 Sum_probs=56.7
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChH-HHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEE
Q 008895 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAF 147 (549)
Q Consensus 69 ~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~-~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 147 (549)
.+|...+...+.. .... .++.+++++....+-...+ +..+++++..|+..+.. ...+++.+...+++.++.++.
T Consensus 226 ~~s~~~~~~~~~~---~~~~-~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~ 300 (549)
T PRK07788 226 PRPEPSPLAPLAG---LLSR-VPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALV 300 (549)
T ss_pred eccCccHHHHHHH---HHhh-CCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEE
Confidence 4666666544333 3334 6788899887766543222 23356677788887765 567788999999999999999
Q ss_pred EcCccHHHH
Q 008895 148 ATSSVVHKL 156 (549)
Q Consensus 148 ~~~~~~~~~ 156 (549)
..+.....+
T Consensus 301 ~~P~~~~~l 309 (549)
T PRK07788 301 VVPVMLSRI 309 (549)
T ss_pred EHHHHHHHH
Confidence 887766654
No 225
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=24.93 E-value=2e+02 Score=27.43 Aligned_cols=69 Identities=14% Similarity=0.124 Sum_probs=50.7
Q ss_pred hHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEcc-CCCCCCHHHHHHHHhhcCCeEEEEcCccHH
Q 008895 86 LQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISP-ANPVNTESEISRQIQLSNPVIAFATSSVVH 154 (549)
Q Consensus 86 L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (549)
|.+...+.+||.|.--..||.---+..--|-..|.--+- +...-+.+++...|...++..+|++++..+
T Consensus 152 L~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 152 LKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred HHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 344335788999888888886555555555566755444 445677999999999999999999987754
No 226
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=24.89 E-value=4.4e+02 Score=31.43 Aligned_cols=96 Identities=17% Similarity=0.154 Sum_probs=67.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH-HHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP-ILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~-v~~la~~~~G~~~v~l~~ 127 (549)
|+.+|++-. .+| ..+|.+.+...+.. ..+..++.++|++....+-+.+.- .-+++.+..|+..+..++
T Consensus 597 ~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~----~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 597 PHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLW----MQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCeEEEEECCCCCCCCCEEEeccHHHHHHHHH----HHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 667776642 233 35787777654433 233368899999998887765543 346778889999887765
Q ss_pred --CCCHHHHHHHHhhcCCeEEEEcCccHHH
Q 008895 128 --VNTESEISRQIQLSNPVIAFATSSVVHK 155 (549)
Q Consensus 128 --~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 155 (549)
..+++.+...+++.++.++...+.....
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~ 702 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAA 702 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHH
Confidence 3578889999999999998877655443
No 227
>PLN03102 acyl-activating enzyme; Provisional
Probab=24.87 E-value=3.2e+02 Score=29.12 Aligned_cols=81 Identities=10% Similarity=-0.052 Sum_probs=57.0
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC-cCHHHHHHHHHHhceeeeee
Q 008895 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (549)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~l~~ 287 (549)
.+|.+.+...+......+ .+..+++++...+|-.- ......++++..|+.++.+.+ ...+++...|++.+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 467777765554443333 25677888888777543 233556788888888888764 67899999999999999988
Q ss_pred cHHHH
Q 008895 288 TPPIV 292 (549)
Q Consensus 288 ~P~~l 292 (549)
.+...
T Consensus 118 ~~~~~ 122 (579)
T PLN03102 118 DRSFE 122 (579)
T ss_pred ChhhH
Confidence 76544
No 228
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=24.84 E-value=2.3e+02 Score=28.29 Aligned_cols=55 Identities=11% Similarity=0.071 Sum_probs=47.2
Q ss_pred EEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCccH
Q 008895 99 FVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV 153 (549)
Q Consensus 99 ~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (549)
.|++.-+.....+-+++.++|+.+..+=|..++..-.+.++..++.+++..+..-
T Consensus 117 ViasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~d 171 (457)
T KOG1250|consen 117 VIASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWD 171 (457)
T ss_pred eEEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHH
Confidence 3556667788999999999999998888999999999999999999999876543
No 229
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=24.69 E-value=4.3e+02 Score=26.36 Aligned_cols=60 Identities=13% Similarity=0.055 Sum_probs=45.4
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 008895 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (549)
Q Consensus 91 g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (549)
-+++|....+....+..-+...++|...|..+..+-|..........++..++.+++++.
T Consensus 106 ~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 106 LITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred CcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 367785444556677777777888888998888776766666667889999999999874
No 230
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=23.96 E-value=3.5e+02 Score=25.39 Aligned_cols=73 Identities=18% Similarity=0.095 Sum_probs=50.4
Q ss_pred CCEEEEEcCCCChHHHHHHHHHHcCCe---EccCCCCCCHHHHHHHHhhcCCeEEEEcCcc-----HHHH---hcCCCeE
Q 008895 95 NDTAFVLSTNSIEIPILYFSLLSLGVI---ISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKL---AKLKHRT 163 (549)
Q Consensus 95 g~~V~i~~~~~~~~~v~~la~~~~G~~---~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~---~~~~~~~ 163 (549)
+.++.+-.-+..+.+- .|..+|.. .+.+.+-++.+.-..++++.++++++|.++. .+++ .+++.++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~v 226 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINV 226 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcE
Confidence 4555544434444443 67787764 6677777888888999999999999997752 2333 3568888
Q ss_pred EEecCCc
Q 008895 164 ILIDSPE 170 (549)
Q Consensus 164 ~~~~~~~ 170 (549)
+++.-+.
T Consensus 227 ivI~RP~ 233 (256)
T TIGR00715 227 IRIARPQ 233 (256)
T ss_pred EEEeCCC
Confidence 8887553
No 231
>KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only]
Probab=23.86 E-value=2.2e+02 Score=27.89 Aligned_cols=77 Identities=12% Similarity=0.099 Sum_probs=54.6
Q ss_pred eCcEeeChHHHHHHHHcC-CCcceEEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEeCc-c
Q 008895 446 YKGYQVAPAELEHLLLSH-REVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINA-I 523 (549)
Q Consensus 446 ~~G~~v~~~~IE~~l~~~-~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v~~-l 523 (549)
+.|.++.+..|...=..+ |+|.........+...++....-.++.+=...+.-++.+.|.+.|++.. .|++++. +
T Consensus 202 ik~infdlp~v~~~a~~~~~gV~~v~gdmfq~~P~~daI~mkWiLhdwtDedcvkiLknC~~sL~~~G---kIiv~E~V~ 278 (342)
T KOG3178|consen 202 IKGINFDLPFVLAAAPYLAPGVEHVAGDMFQDTPKGDAIWMKWILHDWTDEDCVKILKNCKKSLPPGG---KIIVVENVT 278 (342)
T ss_pred CceeecCHHHHHhhhhhhcCCcceecccccccCCCcCeEEEEeecccCChHHHHHHHHHHHHhCCCCC---EEEEEeccC
Confidence 468888888888776666 8998888877777555666666666665555566788888888888753 3555555 5
Q ss_pred CC
Q 008895 524 PK 525 (549)
Q Consensus 524 P~ 525 (549)
|.
T Consensus 279 p~ 280 (342)
T KOG3178|consen 279 PE 280 (342)
T ss_pred CC
Confidence 54
No 232
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=23.76 E-value=5.1e+02 Score=27.72 Aligned_cols=94 Identities=12% Similarity=0.088 Sum_probs=61.9
Q ss_pred eecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHH----HHHHHHHHcCC--eEccCCC------CCCHHHHHH
Q 008895 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP----ILYFSLLSLGV--IISPANP------VNTESEISR 136 (549)
Q Consensus 69 ~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~----v~~la~~~~G~--~~v~l~~------~~~~~~l~~ 136 (549)
.....++.+.+.+++..+.+ +++|.|+..-..+=+ +++.++-+.|+ +...++. ..+.+.+..
T Consensus 49 P~~l~~m~~a~~ri~~ai~~------~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~ 122 (575)
T PRK11070 49 WQQLSGIEKAVELLYNALRE------GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQ 122 (575)
T ss_pred hHHhhCHHHHHHHHHHHHHC------CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHH
Confidence 35567778888888777776 678999987765533 44555666787 3233432 567788887
Q ss_pred HHhhcCCeEEEEcCc------cHHHHhcCCCeEEEecCC
Q 008895 137 QIQLSNPVIAFATSS------VVHKLAKLKHRTILIDSP 169 (549)
Q Consensus 137 ~l~~~~~~~ii~~~~------~~~~~~~~~~~~~~~~~~ 169 (549)
+.+ .++++||+-+- ..+...+.+..++++|..
T Consensus 123 ~~~-~~~~LiItvD~Gi~~~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 123 AHA-RGAQLIVTVDNGISSHAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred HHh-cCCCEEEEEcCCcCCHHHHHHHHHCCCCEEEECCC
Confidence 665 47778876543 233345678888888854
No 233
>PRK00901 methylated-DNA--protein-cysteine methyltransferase; Provisional
Probab=23.74 E-value=1.7e+02 Score=25.07 Aligned_cols=22 Identities=14% Similarity=0.152 Sum_probs=17.2
Q ss_pred CceecHHHHHHH------HHHHHHHhHH
Q 008895 67 GLRVSFSEFTRR------TNSLASYLQN 88 (549)
Q Consensus 67 ~~~~Ty~el~~~------a~~~A~~L~~ 88 (549)
|++.||+||.+. ++.++..+.+
T Consensus 88 G~t~tY~~lA~~~g~p~a~RAVg~A~~~ 115 (155)
T PRK00901 88 GETRSYKEIAVNIGNPKACRAVGLANNK 115 (155)
T ss_pred CCcCCHHHHHHHHCCCchHHHHHHHHHh
Confidence 899999999885 4566666665
No 234
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=23.72 E-value=6.5e+02 Score=26.40 Aligned_cols=90 Identities=9% Similarity=0.059 Sum_probs=60.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh--HHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~--~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++.. .+| ..+|...+...+.. .... .++.+++++....+-... ++..+++.+..|+..+...
T Consensus 186 ~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~---~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~ 261 (547)
T PRK06087 186 GDELAAVLFTSGTEGLPKGVMLTHNNILASERA---YCAR-LNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD 261 (547)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHH---HHHh-cCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC
Confidence 556666543 222 35788877655443 2233 678899998877664432 4456777788898888765
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcC
Q 008895 127 PVNTESEISRQIQLSNPVIAFATS 150 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~ 150 (549)
..+.+.+...+++.++.+++...
T Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~~ 284 (547)
T PRK06087 262 -IFTPDACLALLEQQRCTCMLGAT 284 (547)
T ss_pred -CCCHHHHHHHHHHcCCCEEeccH
Confidence 45778888889998888877543
No 235
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=23.70 E-value=5.3e+02 Score=31.14 Aligned_cols=97 Identities=16% Similarity=0.112 Sum_probs=65.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~~ 127 (549)
|+.+|++-. .+| ..+|.+.+...+..+ .+..++.++|++..+.+-+.+ .+..+|+++..|+..+..+.
T Consensus 414 ~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~----~~~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~ 489 (1389)
T TIGR03443 414 PDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWM----AKRFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTA 489 (1389)
T ss_pred CCCceEEEECCCCCCCCCEEEeccHHHHHHHHHH----HHhcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcCh
Confidence 566776532 233 468888776654433 333678899998877654433 33457888889988776554
Q ss_pred C--CCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 128 V--NTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 128 ~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
. .++..+...+++.++.++...+.....+
T Consensus 490 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l 520 (1389)
T TIGR03443 490 DDIGTPGRLAEWMAKYGATVTHLTPAMGQLL 520 (1389)
T ss_pred hhccCHHHHHHHHHHhCCeEEEeCHHHHHHH
Confidence 3 3577889999999999998777655444
No 236
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=23.59 E-value=5.2e+02 Score=27.88 Aligned_cols=98 Identities=12% Similarity=0.150 Sum_probs=66.8
Q ss_pred CCCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHH-HHHHHcCCeEccCC
Q 008895 55 DDDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY-FSLLSLGVIISPAN 126 (549)
Q Consensus 55 ~p~~~a~~~---~~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~-la~~~~G~~~v~l~ 126 (549)
.|+.+|.+- +.+| --+||+-|...+..+...+. -++++|++.-++|-.-=+=-++ .++...|.+.+.
T Consensus 189 ~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~---~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~-- 263 (613)
T COG1022 189 KPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP---PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVL-- 263 (613)
T ss_pred CccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC---CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEE--
Confidence 377777553 2333 56999999999888877665 2689999999987653222222 333333333332
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
...+...+..-+...+|.+++.-+...+.+.
T Consensus 264 ~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 264 FKEDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred ecCCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 2346788889999999999998888777664
No 237
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=23.16 E-value=3.2e+02 Score=26.73 Aligned_cols=78 Identities=13% Similarity=0.049 Sum_probs=40.1
Q ss_pred cHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 008895 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (549)
Q Consensus 71 Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (549)
.|....+..+++...|.+.+|..+.+ +.+...++.+ +..++.+.+..|-.++..++..........++..+++++..+
T Consensus 26 ~~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 26 RSPEFLALMDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 34455555666666666645664444 4444444334 444444555666655544443332234455566666665543
No 238
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=22.96 E-value=3.1e+02 Score=27.42 Aligned_cols=62 Identities=13% Similarity=0.016 Sum_probs=39.8
Q ss_pred HHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCC-----CCHHHHHHHHhhcCCeEEE
Q 008895 81 SLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAF 147 (549)
Q Consensus 81 ~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 147 (549)
.+...|.. +++++||.|.+..+ .+.....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 60 al~lal~a-l~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMA-LGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHH-cCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34445555 67889998776443 3444555667789888776532 467788877754 456665
No 239
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=22.91 E-value=5.7e+02 Score=24.29 Aligned_cols=59 Identities=10% Similarity=0.000 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCcc
Q 008895 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV 152 (549)
Q Consensus 93 ~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 152 (549)
++|+.|.. ...+..-...-++|.+.|..+..+=|..........++..++++++++...
T Consensus 51 ~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 51 KPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred CCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 35666554 566777777788888999888776665555556678888999999887654
No 240
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=22.87 E-value=5.8e+02 Score=26.12 Aligned_cols=76 Identities=11% Similarity=0.058 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCC----------------CHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN----------------TESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 94 ~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~----------------~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
.|.+|+|..+...-+-++-+ +..+|..++.+-... +..++..++++.++.++|..........
T Consensus 310 ~Gkrvai~~~~~~~~~l~~~-l~elGm~v~~~~~~~~~~~~~~~~~~~~~~~D~~~l~~~i~~~~~dliig~s~~k~~A~ 388 (432)
T TIGR01285 310 GGKKVAIAAEPDLLAAWATF-FTSMGAQIVAAVTTTGSPLLQKLPVETVVIGDLEDLEDLACAAGADLLITNSHGRALAQ 388 (432)
T ss_pred CCCEEEEEcCHHHHHHHHHH-HHHCCCEEEEEEeCCCCHHHHhCCcCcEEeCCHHHHHHHHhhcCCCEEEECcchHHHHH
Confidence 48899999876554444444 457898775544321 3356666666666777776655544444
Q ss_pred cCCCeEEEecCCc
Q 008895 158 KLKHRTILIDSPE 170 (549)
Q Consensus 158 ~~~~~~~~~~~~~ 170 (549)
+.+.+.+-+..+.
T Consensus 389 ~l~ip~ir~g~Pi 401 (432)
T TIGR01285 389 RLALPLVRAGFPL 401 (432)
T ss_pred HcCCCEEEecCCc
Confidence 4555554444333
No 241
>PLN00011 cysteine synthase
Probab=22.84 E-value=5.6e+02 Score=24.95 Aligned_cols=60 Identities=12% Similarity=-0.040 Sum_probs=44.8
Q ss_pred CCCCC-CEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCc
Q 008895 91 RLSKN-DTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS 151 (549)
Q Consensus 91 g~~~g-~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 151 (549)
.+.+| +.|. ....+..-...-++|..+|..+..+=|...+.....+++..++.+++++..
T Consensus 64 ~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 64 LITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred CCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 36777 5554 456677777777888889988777666555567778899999999998753
No 242
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=22.74 E-value=64 Score=20.96 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=19.6
Q ss_pred eEEEEecCCCCHHHHHHHHHhC
Q 008895 310 ETVACGAAPLGKDTIMAFASKF 331 (549)
Q Consensus 310 r~v~~~Ge~l~~~~~~~~~~~~ 331 (549)
+++-++|.|++.+.-..++..|
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHH
Confidence 5688999999999999988887
No 243
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=22.71 E-value=3.2e+02 Score=28.03 Aligned_cols=56 Identities=9% Similarity=0.105 Sum_probs=36.8
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 008895 90 TRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFAT 149 (549)
Q Consensus 90 ~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 149 (549)
.++++||.|.+.. ..+.....++...|+.+++++.+ .+.+.+...+.. +.++|+..
T Consensus 106 ~~~~pGd~VIv~~---~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVA---AGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 3789999887654 33455566777789887776532 357777777653 45666553
No 244
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=22.06 E-value=6.7e+02 Score=26.21 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=64.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++-. .+| ..+|.+.+...+.... .. .+++.+|++....+-.. .++..++..+..|...+..
T Consensus 194 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~- 268 (538)
T TIGR03208 194 PDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYA---ER-LELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ- 268 (538)
T ss_pred CCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHH---hh-cCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-
Confidence 677776532 223 3577777765544333 33 57788999888876543 2455567777888876644
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
+.+++..+...+++.++.++.........+
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 467888999999999999888766555443
No 245
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=22.02 E-value=1.7e+02 Score=23.19 Aligned_cols=40 Identities=15% Similarity=0.285 Sum_probs=30.6
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCC
Q 008895 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGV 120 (549)
Q Consensus 80 ~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~ 120 (549)
..+...+.. .++.+++.|.+++..+.....+.+.+..+|.
T Consensus 64 ~~~~~~~~~-~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAA-LGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHH-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 345556666 7888999999999888777777777777785
No 246
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=21.97 E-value=6.7e+02 Score=26.20 Aligned_cols=89 Identities=12% Similarity=0.007 Sum_probs=58.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCC-CCCEEEEEcCCCCh-HHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLS-KNDTAFVLSTNSIE-IPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~-~g~~V~i~~~~~~~-~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++.. .+| ..+|.+.+...+..++.. .++. ++|++....|-... .+..+++.+..|+..+..+
T Consensus 151 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 151 SGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR----VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH----hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 667777643 222 468998887766655432 4667 88888877765532 2235677888898887665
Q ss_pred C-CC--CHHHHHHHHhhcCCeEEEE
Q 008895 127 P-VN--TESEISRQIQLSNPVIAFA 148 (549)
Q Consensus 127 ~-~~--~~~~l~~~l~~~~~~~ii~ 148 (549)
+ .+ .+..+...+++.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 3 12 4567788888888876543
No 247
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=21.91 E-value=2.6e+02 Score=20.62 Aligned_cols=18 Identities=17% Similarity=0.259 Sum_probs=13.5
Q ss_pred EEEecCCeEEEEcccCCe
Q 008895 426 CYIDEDGFLFIVDRLKDL 443 (549)
Q Consensus 426 ~~~~~~g~~~~~GR~~d~ 443 (549)
..-|++|.+.+.|..++.
T Consensus 33 ~~Td~~G~F~l~G~~~e~ 50 (80)
T PF01060_consen 33 TKTDSDGNFELSGSTNEF 50 (80)
T ss_pred EEECCCceEEEEEEccCC
Confidence 344788888888887765
No 248
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=21.89 E-value=2.8e+02 Score=29.22 Aligned_cols=102 Identities=16% Similarity=0.127 Sum_probs=72.8
Q ss_pred CCCcEEEE---CCCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCCh--HHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALIN---SVTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~---~~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~--~~v~~la~~~~G~~~v~l~ 126 (549)
.+.++++- +.+| ...|-+.+.-.....+.+... +++||++--..+.+.- ....+++-+..|++.+..+
T Consensus 170 ~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~---~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~e 246 (528)
T COG0365 170 ADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGD---LLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYD 246 (528)
T ss_pred CCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhC---CCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeC
Confidence 45566553 2333 457777777777766666554 4588887776666533 3345699999999998765
Q ss_pred C--CCCHHHHHHHHhhcCCeEEEEcCccHHHHhcCC
Q 008895 127 P--VNTESEISRQIQLSNPVIAFATSSVVHKLAKLK 160 (549)
Q Consensus 127 ~--~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 160 (549)
. .++++++..++++.++.++.+.+-.+..+.+.+
T Consensus 247 g~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g 282 (528)
T COG0365 247 GRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLG 282 (528)
T ss_pred CCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcC
Confidence 3 336899999999999999999998887776543
No 249
>PLN02654 acetate-CoA ligase
Probab=21.62 E-value=4.1e+02 Score=29.02 Aligned_cols=68 Identities=7% Similarity=0.039 Sum_probs=51.4
Q ss_pred cCCCCCCEEEEEcCCCCh--HHHHHHHHHHcCCeEccCCC--C-CCHHHHHHHHhhcCCeEEEEcCccHHHHh
Q 008895 90 TRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPANP--V-NTESEISRQIQLSNPVIAFATSSVVHKLA 157 (549)
Q Consensus 90 ~g~~~g~~V~i~~~~~~~--~~v~~la~~~~G~~~v~l~~--~-~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (549)
.+++++|++....+-+.- ....+++.+..|+..+..+. . ..++.+..++++.++.++.+.+.....+.
T Consensus 312 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 384 (666)
T PLN02654 312 FDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLM 384 (666)
T ss_pred cCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 578999987776655432 23456788999999888764 2 35888999999999999998887766554
No 250
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=21.60 E-value=3.9e+02 Score=26.63 Aligned_cols=64 Identities=9% Similarity=0.051 Sum_probs=41.5
Q ss_pred HHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCC-----CCCHHHHHHHHhh---cCCeEEE
Q 008895 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQL---SNPVIAF 147 (549)
Q Consensus 80 ~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii 147 (549)
..+...+.. +++++||.|.+..+. +....-++...|+.++.++. ..+.+.+...++. -++++|+
T Consensus 55 ~al~~~l~a-l~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 55 SALHIACLA-LGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred HHHHHHHHH-cCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 344445555 678899987765543 44455667778987776553 2467888888863 3556665
No 251
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=21.47 E-value=5.6e+02 Score=26.23 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCC-CCC---HHHHHHHHhh
Q 008895 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-VNT---ESEISRQIQL 140 (549)
Q Consensus 93 ~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~-~~~---~~~l~~~l~~ 140 (549)
-.|.+|+|..+....+-++-+-. .+|+.++.+-. ... .+++..+++.
T Consensus 301 l~gkrv~i~g~~~~~~~la~~L~-elGm~v~~~~~~~~~~~~~~~~~~~l~~ 351 (435)
T cd01974 301 LHGKKFALYGDPDFLIGLTSFLL-ELGMEPVHVLTGNGGKRFEKEMQALLDA 351 (435)
T ss_pred cCCCEEEEEcChHHHHHHHHHHH-HCCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 45889999886655444444444 78988755332 111 3445555554
No 252
>PRK05852 acyl-CoA synthetase; Validated
Probab=21.35 E-value=9.4e+02 Score=25.06 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=59.6
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEcc-CCCCCCHHHHHHHHhhcCCe
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISP-ANPVNTESEISRQIQLSNPV 144 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~ 144 (549)
..+|+..+...+..+.. . .+++++|++....+... .+...+++++..|...+. -....+...+...+++.++.
T Consensus 194 v~~~~~~~~~~~~~~~~---~-~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t 269 (534)
T PRK05852 194 VPWTHANIASSVRAIIT---G-YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGAT 269 (534)
T ss_pred EEecHHHHHHHHHHHHH---H-hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCc
Confidence 45788888766655543 3 56788998887766443 455567778887776543 23456778888899999999
Q ss_pred EEEEcCccHHHHh
Q 008895 145 IAFATSSVVHKLA 157 (549)
Q Consensus 145 ~ii~~~~~~~~~~ 157 (549)
.++..+.....+.
T Consensus 270 ~~~~~P~~~~~l~ 282 (534)
T PRK05852 270 WYTAVPTIHQILL 282 (534)
T ss_pred EEEcChHHHHHHH
Confidence 8887777665543
No 253
>PRK13383 acyl-CoA synthetase; Provisional
Probab=21.31 E-value=4.7e+02 Score=27.24 Aligned_cols=84 Identities=12% Similarity=0.026 Sum_probs=56.7
Q ss_pred hhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC-cCHHHHHHHHHHhceeeeee
Q 008895 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (549)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~l~~ 287 (549)
.+|...+...+......+ .+..+++++...++-.- ......+.++..|+..+.+.+ ...+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 356666654443333322 14677788877766432 233556778888999888764 67899999999999999988
Q ss_pred cHHHHHHH
Q 008895 288 TPPIVVAM 295 (549)
Q Consensus 288 ~P~~l~~l 295 (549)
.+.....+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 77665443
No 254
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=21.03 E-value=6.2e+02 Score=29.74 Aligned_cols=97 Identities=19% Similarity=0.110 Sum_probs=65.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCC--ChHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~--~~~~v~~la~~~~G~~~v~l~ 126 (549)
|+.+|++-. .+| ..+|.+.+...+....+ . .++.++|++...+|-. ..+...++..+..|+..+..+
T Consensus 792 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 792 PDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---R-IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---h-hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 677776542 233 35888888766655543 3 5678899988877643 233355677788898887766
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
.......+...+++.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 555566777888888988888776555443
No 255
>PRK06381 threonine synthase; Validated
Probab=20.96 E-value=2.8e+02 Score=26.90 Aligned_cols=88 Identities=6% Similarity=-0.063 Sum_probs=54.4
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHH
Q 008895 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (549)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~ 137 (549)
++.+-++..+.+=||++-- +..+...+.+ .|. +.| +....+..-..+-++|...|..+..+=|...+......
T Consensus 32 ~i~~K~E~~nptGS~K~R~--a~~~l~~a~~-~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~ 104 (319)
T PRK06381 32 KIYLKFEGANPTGTQKDRI--AEAHVRRAMR-LGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKE 104 (319)
T ss_pred eEEEEecCCCCccCcHHHH--HHHHHHHHHH-cCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 5666655444455555522 2222223344 342 344 34556777777788888999887775555454555668
Q ss_pred HhhcCCeEEEEcCcc
Q 008895 138 IQLSNPVIAFATSSV 152 (549)
Q Consensus 138 l~~~~~~~ii~~~~~ 152 (549)
++..++++++++...
T Consensus 105 l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 105 MEKYGAEIIYVDGKY 119 (319)
T ss_pred HHHcCCEEEEcCCCH
Confidence 999999999998653
No 256
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=20.78 E-value=2.2e+02 Score=21.92 Aligned_cols=52 Identities=12% Similarity=0.076 Sum_probs=36.1
Q ss_pred eecHHHHHHH----HHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCe
Q 008895 69 RVSFSEFTRR----TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (549)
Q Consensus 69 ~~Ty~el~~~----a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~ 121 (549)
.+.+.++... ...+...+.. .++.+++.|.+++.++.....+...+...|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGF-PKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcc-cCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4556665432 2345566665 67778889999998888777777777788863
No 257
>PRK12434 tRNA pseudouridine synthase A; Reviewed
Probab=20.70 E-value=3.8e+02 Score=24.93 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCCcceEEEEeecCCCCC----ceeEEEEEeCCCCCCCHHHHHHHHHhcCCCCCcccEEEEe
Q 008895 454 AELEHLLLSHREVADAAVIPYPDEEAG----QMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFI 520 (549)
Q Consensus 454 ~~IE~~l~~~~~v~~~~vv~~~~~~~~----~~~~~~v~~~~~~~~~~~~i~~~l~~~l~~~~~p~~i~~v 520 (549)
.+||.+|...-+ .+.-+++..+.+.| ..++.|-. ....+.+.+...|++.||+.-+...+..+
T Consensus 30 ~~le~aL~~~~~-~~~~~~~agRTD~GVHA~~qv~~f~~---~~~~~~~~l~~~lN~~LP~dI~V~~~~~v 96 (245)
T PRK12434 30 GKIESVLSEMTG-EEIEIIGCGRTDAGVHALNQVANFQT---DEKLSEDKIKKYLNEYLPNDIVVTNVEEV 96 (245)
T ss_pred HHHHHHHHHHhC-CCeEEEEeccCCCCcCccCcEEEEEc---CCCCCHHHHHHHHHccCCCCeEEEEEEEC
Confidence 478888877643 45556666655544 23333332 22356778999999999865544444333
No 258
>PRK10717 cysteine synthase A; Provisional
Probab=20.69 E-value=5.8e+02 Score=24.88 Aligned_cols=90 Identities=10% Similarity=-0.058 Sum_probs=54.0
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHH
Q 008895 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (549)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~ 137 (549)
++.+-.+....+-+++.- .....+...+.+ ..+++|+.|.- ...+..-..+-++|..+|..+..+=|...+......
T Consensus 29 ~i~~K~E~~nptGS~K~R-ga~~~v~~a~~~-g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~ 105 (330)
T PRK10717 29 EILGKAEFLNPGGSVKDR-AALNIIWDAEKR-GLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDL 105 (330)
T ss_pred eEEEEeeccCCCCCchHH-HHHHHHHHHHHc-CCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 455554433333444432 122223333333 22466766544 556677777777888899877776665555666788
Q ss_pred HhhcCCeEEEEcC
Q 008895 138 IQLSNPVIAFATS 150 (549)
Q Consensus 138 l~~~~~~~ii~~~ 150 (549)
++..++++++++.
T Consensus 106 ~~~~GA~V~~~~~ 118 (330)
T PRK10717 106 LRALGAELVLVPA 118 (330)
T ss_pred HHHcCCEEEEeCC
Confidence 8999999998875
No 259
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=20.54 E-value=7.1e+02 Score=23.73 Aligned_cols=90 Identities=12% Similarity=-0.003 Sum_probs=54.3
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCChHHHHHHHHHHcCCeEccCCCCCCHHHHHHH
Q 008895 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (549)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~ 137 (549)
++.+-.+..+.+=++++-- ....+...+.+ ..+.+|+.|.- ...+..-...-++|...|..+..+-|...+......
T Consensus 24 ~i~~K~E~~nptGS~K~R~-a~~~v~~a~~~-g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 100 (290)
T TIGR01138 24 EVWLKLEGNNPAGSVKDRP-ALSMIVEAEKR-GEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAA 100 (290)
T ss_pred eEEEEEccCCCCccHHHHH-HHHHHHHHHHc-CCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHH
Confidence 4555544333344444321 12223333333 23467776655 455666777777888899887776665555556678
Q ss_pred HhhcCCeEEEEcC
Q 008895 138 IQLSNPVIAFATS 150 (549)
Q Consensus 138 l~~~~~~~ii~~~ 150 (549)
++..++.+++++.
T Consensus 101 ~~~~GA~v~~v~~ 113 (290)
T TIGR01138 101 MRAYGAELILVTK 113 (290)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999875
No 260
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=20.36 E-value=7.1e+02 Score=27.70 Aligned_cols=118 Identities=14% Similarity=0.091 Sum_probs=73.5
Q ss_pred CCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccCC-----CCCCC-----------cEEEEecChhhHHHHHHHH
Q 008895 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-----KRVSP-----------AVMLFTMPYFHIYGLFFCF 253 (549)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~~~-----------~~~~~~~pl~~~~g~~~~~ 253 (549)
.++.+|++....|. + ...+|.+.+...+..+...+. +..++ +++...++-.. --+...+
T Consensus 74 ~p~~~Al~~~~~g~---~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~-ew~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSCGE---P-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI-NWLVADL 148 (746)
T ss_pred cCCceeEeccCCCC---C-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH-HHHHHHH
Confidence 35666665332221 1 124677766554444333221 34554 66766665432 2235667
Q ss_pred HHhhhccEEEEec-CcCHHHHHHHHHHhceeeeeecHHHHHHHHhCCCCCCCCCCCceEEEEec
Q 008895 254 RAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (549)
Q Consensus 254 ~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~~G 316 (549)
+++..|+..+.+. .+..+++...|++-++.+++..+..+..+..... .++.++.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEEC
Confidence 7888898888875 5788999999999999999998877777654321 246677776544
No 261
>PRK06060 acyl-CoA synthetase; Validated
Probab=20.11 E-value=6e+02 Score=27.89 Aligned_cols=98 Identities=12% Similarity=0.104 Sum_probs=64.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCC
Q 008895 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (549)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~ 126 (549)
++.+|++-. .+| ..+|...+...+..+.. .. .++.+++++....+-.. .+...++..+..|+..+..+
T Consensus 144 ~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~--~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 220 (705)
T PRK06060 144 GDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCR--KA-LRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINS 220 (705)
T ss_pred CCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHH--Hh-hCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeC
Confidence 567776642 233 35777777665544332 12 56788888776654332 23345667788888887766
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccHHHH
Q 008895 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (549)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (549)
.......+...+++.++.++...+.....+
T Consensus 221 ~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l 250 (705)
T PRK06060 221 APVTPEAAAILSARFGPSVLYGVPNFFARV 250 (705)
T ss_pred CCCCHHHHHHHHHhcCCeEEeeHHHHHHHH
Confidence 667788888889999999998877665544
No 262
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=20.11 E-value=9.7e+02 Score=24.75 Aligned_cols=99 Identities=11% Similarity=-0.005 Sum_probs=62.1
Q ss_pred CCCCEEEEEccCCCCCccchhhhcHHHHHHHHHHhhccC--CCCCCCcEEEEecChhhHHHHHHHHHHhhhccEEEEecC
Q 008895 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (549)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~g~~~~~~~~ 267 (549)
.++.++++.... .+.. -.+|..++...+......+ .+..+++++....+-... .....+.++..|+..+.+.+
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~-~~~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPE-FIFCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEEcCc
Confidence 455666554321 1211 2356666654444433322 146677888777665433 22556678888988888754
Q ss_pred -cCHHHHHHHHHHhceeeeeecHHHHH
Q 008895 268 -FDLKMMLKAVEEFRVTHAAVTPPIVV 293 (549)
Q Consensus 268 -~~~~~~~~~l~~~~~t~l~~~P~~l~ 293 (549)
...+.+...+++.++..++..+....
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhH
Confidence 67899999999999999988876543
No 263
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=20.04 E-value=8.9e+02 Score=24.25 Aligned_cols=82 Identities=11% Similarity=0.062 Sum_probs=46.9
Q ss_pred ceecHHHHHHHHHHHHHHhHHhcCCCCCCEEEEEcCCCC--hHHHHHHHHHHcCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 008895 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (549)
Q Consensus 68 ~~~Ty~el~~~a~~~A~~L~~~~g~~~g~~V~i~~~~~~--~~~v~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (549)
..+|.+.+...+..+++.+.- ...+.+++..++|-.. -+...++..+.+|+..+... ..++..+...++.. .+
T Consensus 113 V~~sh~~l~~~~~~~~~~~~~--~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~ 187 (386)
T TIGR02372 113 VTHSWAALLSEAQAIAKILGE--RPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DL 187 (386)
T ss_pred eEeeHHHHHHHHHHHHHHhCc--CCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CE
Confidence 468999998888777665421 1233456766666542 23344566677898887665 35555544444321 34
Q ss_pred EEEcCccHH
Q 008895 146 AFATSSVVH 154 (549)
Q Consensus 146 ii~~~~~~~ 154 (549)
++..+....
T Consensus 188 ~~~~P~~l~ 196 (386)
T TIGR02372 188 IVGTPFIWE 196 (386)
T ss_pred EEECcHHHH
Confidence 444444433
Done!