BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008897
(549 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFE-DDVLWYCEDCEPKVAK 57
C+ C KG + LI C++C A H++CL PA +E D W C C+P A+
Sbjct: 1187 CKVCRKKGEDDKLILCDEC-NKAFHLFCL--RPALYEVPDGEWQCPACQPATAR 1237
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFE-DDVLWYCEDCEPKVAK 57
C+ C KG + LI C++C A H++CL PA +E D W C C+P A+
Sbjct: 1187 CKVCRKKGEDDKLILCDEC-NKAFHLFCL--RPALYEVPDGEWQCPACQPPTAR 1237
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 40.0 bits (92), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCL-PVLPASFEDDVLWYCEDCEPK 54
C+ C KG E+++ C+ C HIYC+ P L E D W+C +C PK
Sbjct: 225 CKVCRKKGDGESMVLCDGCDR-GHHIYCVRPKLKYVPEGD--WFCPECHPK 272
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 39.7 bits (91), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCL-PVLPASFE-DDVLWYCEDCEPKVAKPST 60
C+ C KG + LI C++C A H++CL PVL F D W C C+P A+ S+
Sbjct: 1154 CKVCRKKGEDDKLILCDEC-NKAFHLFCLRPVL---FNIPDGEWLCPACQPATARRSS 1207
>sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1
PE=3 SV=2
Length = 775
Score = 39.3 bits (90), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDC 51
+ C CG K E + C++C A HIYCL ++ D WYC DC
Sbjct: 315 MCACYVCGGKQDPEKQLLCDECDM-AFHIYCLKPPLSAIPQDEDWYCPDC 363
>sp|A2BIL7|BAZ1B_DANRE Tyrosine-protein kinase BAZ1B OS=Danio rerio GN=baz1b PE=1 SV=2
Length = 1536
Score = 38.9 bits (89), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCL-PVL---PASFEDDVLWYCEDCEPKVAKPST 60
C+ C KG + LI C++C A H++CL P L PA W C C+P +A+ S+
Sbjct: 1205 CKVCRRKGEDDKLILCDEC-NKAFHLFCLRPALYRIPAGE-----WLCPACQPTIARRSS 1258
>sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1
Length = 786
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDC 51
+ C CG K + + C++C A HIYCL +S + WYC DC
Sbjct: 319 MCACHVCGGKQDPDKQLMCDECDM-AFHIYCLRPPLSSVPPEEEWYCPDC 367
>sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1
Length = 776
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDC 51
V C CG K + + C++C A H YCL + DD WYC DC
Sbjct: 313 VCNCHVCGIKQDPDKQLLCDECDM-AFHTYCLNPPLTTIPDDEDWYCPDC 361
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCL-PVLPASFEDDVLWYCEDCEPK 54
C+ C KG E ++ C+ C H YC+ P L A + D W+C +C PK
Sbjct: 1152 CKICRKKGDAENMVLCDGCDR-GHHTYCVRPKLKAVPDGD--WFCPECRPK 1199
>sp|B6CHA3|UHRF1_XENLA E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2
SV=1
Length = 772
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDC 51
+ C CG K E + C++C A HIYCL + D WYC DC
Sbjct: 313 MCACCICGGKQDPEKQLLCDECDL-AFHIYCLKPPLSVIPQDEDWYCPDC 361
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCL-PVLPASFEDDVLWYCEDCEPK 54
C+ C KG E ++ C+ C H YC+ P L E D W+C +C PK
Sbjct: 1151 CKICRKKGDAENMVLCDGCDR-GHHTYCVRPKLKTVPEGD--WFCPECRPK 1198
>sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1
SV=1
Length = 793
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDC 51
V C CG + + + C++C A HIYCL +S + WYC +C
Sbjct: 315 VCACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPPLSSVPSEDEWYCPEC 363
>sp|Q6BNL6|YNG2_DEBHA Chromatin modification-related protein YNG2 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=YNG2 PE=3 SV=1
Length = 285
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 14 YEALIGCEK--CQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55
+ +IGC+ C+ H C+ + A +DD +WYC DC PK+
Sbjct: 235 FGEMIGCDNDDCKFEWFHWSCVGIT-APPKDDEIWYCPDCAPKM 277
>sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana
GN=ORTH2 PE=1 SV=1
Length = 645
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKVAKPSTIVN 63
VC +C E + C C T H+ CL P + + W+C DC S ++
Sbjct: 14 VCMRCKSNPPPEESLTCGTC-VTPWHVSCLSSPPKTLASTLQWHCPDC-------SGEID 65
Query: 64 PSSVLGGRCDSDSENLEIVQATQS 87
P V GG +S ++V A ++
Sbjct: 66 PLPVSGGATGFESAGSDLVAAIRA 89
>sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1
SV=1
Length = 803
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCE 52
C +CG+K + C++C A HIYCL ++ WYC C+
Sbjct: 348 CHKCGEKRDPNMQLLCDEC-NMAYHIYCLSPPLDKVPEEEYWYCPSCK 394
>sp|Q24746|NEUR_DROVI Protein neuralized OS=Drosophila virilis GN=neur PE=4 SV=1
Length = 747
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 22/102 (21%)
Query: 335 SLIASSRPSNIPEHCFVPAQPIIEPIWKGNLRL--SSDKYGSIEGLVAHLSTSACSKVFQ 392
++ S+RP I E V I W G +R +S+ S+EG
Sbjct: 126 AITFSARPVRINERICVKFAEISNN-WNGGIRFGFTSNDPASLEGA-------------- 170
Query: 393 EAKLLPQLLCPELLPRSNSWPKSFHKWGPSDDNIALYLFPNN 434
LP+ CP+L R W K+ H+ DNI LY + NN
Sbjct: 171 ----LPKYACPDLTNRPGFWAKALHEQYCEKDNI-LYYYVNN 207
>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1
SV=2
Length = 782
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDC 51
C CG + E + C++C A H+YCL S + WYC C
Sbjct: 322 ACHVCGGREAPEKQLLCDECDM-AFHLYCLKPPLTSVPPEPEWYCPSC 368
>sp|Q4R8E0|E2AK1_MACFA Eukaryotic translation initiation factor 2-alpha kinase 1 OS=Macaca
fascicularis GN=EIF2AK1 PE=2 SV=1
Length = 631
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 360 IWKGNLRLSSDKYGSIEGLVAHLSTSACSKVFQEAKLLPQLLCPELLPRSNSWPKSFHKW 419
++K +L Y + L+ + + C KV +E K+L L P ++ +W + H
Sbjct: 181 VYKVRNKLDGQYYAIKKILIKGATKTDCMKVLREVKVLAGLQHPNIVGYHTAWIEHVHVI 240
Query: 420 GPSDDNIALYL 430
P D A+ L
Sbjct: 241 QPRADRAAIEL 251
>sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1
SV=1
Length = 802
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCL-PVLPASFEDDVLWYCEDCE 52
C+ CG K + C++C A HIYCL P L E++ WYC C+
Sbjct: 347 CRVCGGKHEPNMQLLCDEC-NVAYHIYCLNPPLDKVPEEE-YWYCPSCK 393
>sp|Q8S8M9|ALFL6_ARATH PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2
SV=1
Length = 256
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 3 TVCQQCGDK-GFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKVAKP 58
VC CGD G E I C+ C+ H C+ + PA E + C C K A+P
Sbjct: 201 AVCGACGDNYGTDEFWICCDACEKW-FHGKCVKITPAKAEHIKHYKCPTCSNKRARP 256
>sp|P53127|SNT2_YEAST SANT domain-containing protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNT2 PE=1 SV=1
Length = 1403
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 5 CQQCGDKGFYEALIGCEKCQTTAVHIYCL-PVLPASFEDDVLWYCEDC 51
CQ C + + + C++C A H+YC+ P L DV+W C C
Sbjct: 320 CQFCKEWCIQKESLSCDECGVCA-HLYCMDPPLDRKPNKDVVWTCFSC 366
>sp|Q5EAW9|TAF3_XENLA Transcription initiation factor TFIID subunit 3 OS=Xenopus laevis
GN=taf3 PE=2 SV=1
Length = 845
Score = 32.3 bits (72), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCE 52
+C C +IGC++C H C+ + A ED+ W+C CE
Sbjct: 783 ICPGCNKPDDGSPMIGCDQCDD-WYHWPCVGINAAPPEDE-QWFCTKCE 829
>sp|B0S1C1|MUTS_FINM2 DNA mismatch repair protein MutS OS=Finegoldia magna (strain ATCC
29328) GN=mutS PE=3 SV=1
Length = 856
Score = 32.3 bits (72), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 31/208 (14%)
Query: 219 VVTNDPPYTRECSSNAHKVVVIEVHSMGNDKKGYQFRRQRELVKNSSDTGTKSLKNSLVT 278
+ T D YT S + +K++ E+ + +E++ N + T NSL T
Sbjct: 143 ISTGDVSYTNTTSDDIYKIIENEISKIT----------PKEIIFNDHEFST----NSLET 188
Query: 279 TSHSFSIPKHSSNVSEKSIFEVQFKEDAVKDLSPIRWSGLNGGSST-------EESESSK 331
+ FSI + N SI D + S I + N ++ + +
Sbjct: 189 IASKFSIVLTTVNNGTDSI-------DFIN--SKITYDNTNSETTNICVANLLKYVFRYQ 239
Query: 332 KETSLIASSRPSNIPEHCFVPAQPIIEPIWKGNLRLSSDKYGSIEGLVAHLSTSACSKVF 391
+ I SSR I E + + +I + NL +S K GS+ G++ H TS S++
Sbjct: 240 DDLVHINSSRKYYINEFMEIDSNSVINLEIQKNLYTNS-KNGSLFGVLNHTKTSMGSRLL 298
Query: 392 QEAKLLPQLLCPELLPRSNSWPKSFHKW 419
P + E+L R N + F +
Sbjct: 299 HSYLERPLMDKEEILIRQNRVEEIFEDY 326
>sp|Q5AHB8|YNG2_CANAL Chromatin modification-related protein YNG2 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=YNG2 PE=3 SV=2
Length = 298
Score = 32.3 bits (72), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 1 MVTVCQQCGDKGFYEALIGC--EKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55
+ CQ+ + +IGC E C+ H C+ + +DD +WYC DC K+
Sbjct: 238 LYCFCQRVS----FGEMIGCDNEDCKYEWFHWSCVGITSPP-KDDEIWYCPDCASKM 289
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,231,417
Number of Sequences: 539616
Number of extensions: 8082097
Number of successful extensions: 18231
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 18085
Number of HSP's gapped (non-prelim): 216
length of query: 549
length of database: 191,569,459
effective HSP length: 123
effective length of query: 426
effective length of database: 125,196,691
effective search space: 53333790366
effective search space used: 53333790366
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)