Query 008898
Match_columns 549
No_of_seqs 413 out of 2974
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 17:57:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008898.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008898hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.4E-52 3E-57 434.4 25.3 280 238-523 61-352 (361)
2 KOG0581 Mitogen-activated prot 100.0 1.7E-48 3.7E-53 385.0 19.0 257 253-534 80-345 (364)
3 KOG0615 Serine/threonine prote 100.0 8.1E-49 1.7E-53 389.6 16.5 256 251-531 171-444 (475)
4 KOG0575 Polo-like serine/threo 100.0 1.9E-47 4.2E-52 397.3 23.0 249 252-530 18-275 (592)
5 KOG0598 Ribosomal protein S6 k 100.0 1.7E-47 3.8E-52 377.7 19.0 266 251-545 24-303 (357)
6 KOG0192 Tyrosine kinase specif 100.0 2.5E-45 5.4E-50 378.1 21.0 248 255-524 44-304 (362)
7 KOG0595 Serine/threonine-prote 100.0 7.2E-45 1.6E-49 362.0 21.0 198 251-457 9-219 (429)
8 KOG0694 Serine/threonine prote 100.0 7.6E-45 1.6E-49 381.9 20.7 265 251-545 367-646 (694)
9 KOG0616 cAMP-dependent protein 100.0 2E-44 4.4E-49 344.9 18.4 261 252-545 44-319 (355)
10 KOG0593 Predicted protein kina 100.0 1.6E-44 3.5E-49 346.2 17.1 268 252-534 2-294 (396)
11 KOG0591 NIMA (never in mitosis 100.0 9.9E-46 2.1E-50 351.3 8.4 249 253-521 20-283 (375)
12 KOG0592 3-phosphoinositide-dep 100.0 2.2E-44 4.8E-49 368.8 18.7 259 251-534 72-348 (604)
13 KOG0582 Ste20-like serine/thre 100.0 2.7E-43 5.9E-48 353.3 23.1 273 252-541 26-310 (516)
14 KOG0197 Tyrosine kinases [Sign 100.0 4.4E-44 9.6E-49 368.7 16.6 246 256-524 210-462 (468)
15 KOG0605 NDR and related serine 100.0 4.5E-43 9.8E-48 359.5 20.1 261 250-534 139-455 (550)
16 KOG0583 Serine/threonine prote 100.0 4E-42 8.6E-47 357.1 23.8 253 250-530 15-281 (370)
17 KOG0659 Cdk activating kinase 100.0 2.4E-42 5.2E-47 326.2 18.8 262 252-529 2-286 (318)
18 KOG0578 p21-activated serine/t 100.0 8.3E-43 1.8E-47 360.1 17.1 261 252-539 273-538 (550)
19 KOG0597 Serine-threonine prote 100.0 1.4E-42 3E-47 355.6 16.3 242 252-518 2-250 (808)
20 KOG0198 MEKK and related serin 100.0 2.1E-42 4.5E-47 346.7 16.7 256 252-532 17-284 (313)
21 KOG0588 Serine/threonine prote 100.0 2.6E-42 5.6E-47 360.2 17.7 251 252-533 12-272 (786)
22 KOG0600 Cdc2-related protein k 100.0 2.6E-42 5.6E-47 351.0 17.1 263 251-527 116-403 (560)
23 cd05631 STKc_GRK4 Catalytic do 100.0 4.9E-41 1.1E-45 339.3 23.8 265 254-545 2-283 (285)
24 KOG0661 MAPK related serine/th 100.0 1.7E-42 3.8E-47 349.9 12.6 267 250-532 8-299 (538)
25 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.4E-41 1.6E-45 340.8 24.3 267 251-531 4-295 (303)
26 KOG0201 Serine/threonine prote 100.0 1.5E-42 3.2E-47 348.0 10.9 251 252-531 13-270 (467)
27 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.9E-41 6.3E-46 349.1 20.2 251 251-522 6-333 (338)
28 KOG0580 Serine/threonine prote 100.0 5.9E-42 1.3E-46 319.3 13.2 247 251-529 21-278 (281)
29 KOG0193 Serine/threonine prote 100.0 1.4E-41 3.1E-46 352.0 17.1 255 249-524 389-654 (678)
30 cd05571 STKc_PKB Catalytic dom 100.0 4.1E-41 8.8E-46 346.2 20.3 249 258-536 1-263 (323)
31 KOG0611 Predicted serine/threo 100.0 1.2E-41 2.5E-46 336.6 14.3 241 251-518 52-302 (668)
32 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.3E-40 2.7E-45 336.8 22.1 261 252-527 5-288 (288)
33 cd05612 STKc_PRKX_like Catalyt 100.0 4.1E-41 8.9E-46 340.9 18.6 249 252-533 1-263 (291)
34 KOG0585 Ca2+/calmodulin-depend 100.0 1.6E-41 3.5E-46 342.5 15.1 258 250-530 95-378 (576)
35 PTZ00284 protein kinase; Provi 100.0 1.2E-40 2.7E-45 359.7 23.2 272 246-534 123-448 (467)
36 cd07848 STKc_CDKL5 Catalytic d 100.0 3.3E-40 7.1E-45 332.8 23.8 262 252-527 1-287 (287)
37 PTZ00263 protein kinase A cata 100.0 6.6E-41 1.4E-45 345.6 18.9 250 252-534 18-281 (329)
38 cd07862 STKc_CDK6 Catalytic do 100.0 2.3E-40 4.9E-45 334.5 21.0 259 253-527 2-290 (290)
39 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.8E-40 3.9E-45 342.7 20.6 256 252-532 1-265 (333)
40 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.8E-40 6E-45 341.2 21.3 267 253-532 1-298 (338)
41 PTZ00036 glycogen synthase kin 100.0 2.5E-40 5.4E-45 354.4 21.7 264 251-532 65-359 (440)
42 PHA03212 serine/threonine kina 100.0 6.6E-40 1.4E-44 345.9 23.7 260 252-529 92-381 (391)
43 cd05096 PTKc_DDR1 Catalytic do 100.0 7.8E-40 1.7E-44 333.3 23.1 256 252-522 5-304 (304)
44 cd05595 STKc_PKB_beta Catalyti 100.0 4.9E-40 1.1E-44 338.3 21.6 247 258-534 1-261 (323)
45 cd05585 STKc_YPK1_like Catalyt 100.0 4.2E-40 9E-45 337.0 20.6 244 260-533 1-256 (312)
46 KOG0033 Ca2+/calmodulin-depend 100.0 1.2E-41 2.6E-46 317.6 8.2 256 250-531 9-274 (355)
47 KOG0599 Phosphorylase kinase g 100.0 9.2E-41 2E-45 315.9 13.9 258 249-533 14-292 (411)
48 cd05593 STKc_PKB_gamma Catalyt 100.0 5.6E-40 1.2E-44 338.6 20.9 247 258-534 1-261 (328)
49 PHA02988 hypothetical protein; 100.0 8E-40 1.7E-44 330.4 21.5 243 256-524 24-280 (283)
50 KOG0610 Putative serine/threon 100.0 3.6E-40 7.7E-45 328.5 18.5 259 252-533 77-401 (459)
51 PTZ00426 cAMP-dependent protei 100.0 4.1E-40 9E-45 341.3 19.6 252 252-536 30-296 (340)
52 cd06649 PKc_MEK2 Catalytic dom 100.0 2.4E-39 5.3E-44 334.2 25.1 264 251-531 4-308 (331)
53 cd05626 STKc_LATS2 Catalytic d 100.0 1E-39 2.2E-44 343.6 22.0 262 253-535 2-316 (381)
54 KOG0663 Protein kinase PITSLRE 100.0 4.1E-40 8.9E-45 319.7 17.2 261 251-529 75-366 (419)
55 cd05628 STKc_NDR1 Catalytic do 100.0 3E-39 6.5E-44 337.8 24.9 265 252-535 1-304 (363)
56 KOG1026 Nerve growth factor re 100.0 6E-41 1.3E-45 361.1 12.3 247 253-521 487-760 (774)
57 PLN00034 mitogen-activated pro 100.0 5.5E-39 1.2E-43 334.4 26.8 253 253-532 75-336 (353)
58 KOG0032 Ca2+/calmodulin-depend 100.0 1.5E-39 3.3E-44 337.9 22.0 254 251-530 34-299 (382)
59 cd05589 STKc_PKN Catalytic dom 100.0 1.2E-39 2.7E-44 335.3 20.7 252 254-535 1-268 (324)
60 cd05599 STKc_NDR_like Catalyti 100.0 1.3E-39 2.8E-44 340.4 20.7 260 252-533 1-305 (364)
61 cd07874 STKc_JNK3 Catalytic do 100.0 1.5E-39 3.3E-44 338.8 21.0 268 250-533 15-320 (355)
62 cd05573 STKc_ROCK_NDR_like Cat 100.0 4E-40 8.7E-45 342.0 16.6 261 252-534 1-295 (350)
63 KOG0594 Protein kinase PCTAIRE 100.0 1.1E-39 2.5E-44 322.0 18.8 273 253-540 12-318 (323)
64 cd05104 PTKc_Kit Catalytic dom 100.0 1.3E-39 2.7E-44 342.1 20.3 250 252-522 35-373 (375)
65 cd05614 STKc_MSK2_N N-terminal 100.0 2.6E-39 5.6E-44 333.9 22.0 256 253-533 1-276 (332)
66 cd05584 STKc_p70S6K Catalytic 100.0 2E-39 4.3E-44 333.7 20.8 246 258-533 2-265 (323)
67 cd07876 STKc_JNK2 Catalytic do 100.0 1.7E-39 3.8E-44 338.9 20.5 264 250-529 19-320 (359)
68 cd05594 STKc_PKB_alpha Catalyt 100.0 1E-39 2.2E-44 336.0 18.4 246 258-533 1-261 (325)
69 KOG4721 Serine/threonine prote 100.0 5.2E-40 1.1E-44 336.4 15.7 245 256-531 128-385 (904)
70 cd05625 STKc_LATS1 Catalytic d 100.0 2E-39 4.3E-44 341.4 20.4 262 253-536 2-317 (382)
71 KOG4717 Serine/threonine prote 100.0 8.7E-40 1.9E-44 331.3 16.8 250 252-531 18-277 (864)
72 cd05106 PTKc_CSF-1R Catalytic 100.0 1.6E-39 3.6E-44 341.1 19.6 251 251-522 37-371 (374)
73 cd07863 STKc_CDK4 Catalytic do 100.0 2.6E-39 5.5E-44 326.2 20.1 259 253-527 1-288 (288)
74 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.6E-39 9.9E-44 319.0 21.6 247 252-521 4-256 (256)
75 cd05587 STKc_cPKC Catalytic do 100.0 5.4E-39 1.2E-43 330.5 22.8 250 253-532 1-265 (324)
76 cd06650 PKc_MEK1 Catalytic dom 100.0 5.5E-39 1.2E-43 331.9 22.8 264 251-532 4-307 (333)
77 cd07875 STKc_JNK1 Catalytic do 100.0 2.9E-39 6.3E-44 337.9 20.9 266 251-532 23-326 (364)
78 cd05621 STKc_ROCK2 Catalytic d 100.0 1.8E-39 4E-44 340.2 19.4 257 250-531 41-311 (370)
79 cd05608 STKc_GRK1 Catalytic do 100.0 7.1E-39 1.5E-43 322.6 22.8 248 260-533 1-266 (280)
80 KOG0658 Glycogen synthase kina 100.0 3.8E-40 8.2E-45 325.1 13.0 271 253-541 25-323 (364)
81 cd05596 STKc_ROCK Catalytic do 100.0 2.5E-39 5.4E-44 339.3 19.9 257 251-532 42-312 (370)
82 cd05072 PTKc_Lyn Catalytic dom 100.0 4.9E-39 1.1E-43 319.5 20.9 248 252-522 6-260 (261)
83 cd05618 STKc_aPKC_iota Catalyt 100.0 4.4E-39 9.6E-44 332.0 21.2 251 258-532 1-270 (329)
84 cd05048 PTKc_Ror Catalytic Dom 100.0 5.9E-39 1.3E-43 322.8 21.6 249 252-522 5-282 (283)
85 cd05616 STKc_cPKC_beta Catalyt 100.0 4.7E-39 1E-43 330.8 21.2 252 253-534 1-267 (323)
86 KOG0660 Mitogen-activated prot 100.0 4.5E-40 9.8E-45 323.9 12.9 270 251-533 21-319 (359)
87 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-38 2.3E-43 326.7 23.7 260 257-527 6-317 (317)
88 cd05598 STKc_LATS Catalytic do 100.0 2.4E-39 5.3E-44 340.0 19.0 259 252-532 1-309 (376)
89 cd05588 STKc_aPKC Catalytic do 100.0 7.3E-39 1.6E-43 330.4 22.2 250 258-531 1-269 (329)
90 cd05590 STKc_nPKC_eta Catalyti 100.0 5.8E-39 1.3E-43 329.8 21.3 246 258-533 1-262 (320)
91 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-38 2.3E-43 322.1 22.8 254 253-533 1-270 (285)
92 cd05068 PTKc_Frk_like Catalyti 100.0 9.9E-39 2.2E-43 317.5 22.1 249 251-522 5-260 (261)
93 PHA03209 serine/threonine kina 100.0 1E-38 2.2E-43 333.1 23.1 259 251-529 65-356 (357)
94 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-38 2.4E-43 327.2 22.9 246 258-533 1-257 (316)
95 cd05592 STKc_nPKC_theta_delta 100.0 9.9E-39 2.1E-43 327.5 22.5 245 258-532 1-256 (316)
96 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.7E-39 1.5E-43 322.7 20.8 266 253-524 4-282 (283)
97 cd05591 STKc_nPKC_epsilon Cata 100.0 3.7E-39 8.1E-44 331.3 19.3 246 258-533 1-263 (321)
98 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.3E-39 1.8E-43 326.6 21.7 265 252-531 6-293 (309)
99 cd05620 STKc_nPKC_delta Cataly 100.0 8.6E-39 1.9E-43 328.0 21.8 246 258-533 1-257 (316)
100 cd05570 STKc_PKC Catalytic dom 100.0 8E-39 1.7E-43 328.5 21.5 246 258-533 1-261 (318)
101 cd07853 STKc_NLK Catalytic dom 100.0 7.1E-39 1.5E-43 336.0 21.0 264 253-530 1-294 (372)
102 cd05064 PTKc_EphR_A10 Catalyti 100.0 1E-38 2.2E-43 318.8 21.2 249 251-522 4-264 (266)
103 cd05601 STKc_CRIK Catalytic do 100.0 2.5E-39 5.3E-44 333.7 17.3 255 252-532 1-271 (330)
104 cd05629 STKc_NDR_like_fungal C 100.0 5.4E-39 1.2E-43 337.5 19.8 258 252-531 1-312 (377)
105 PHA03211 serine/threonine kina 100.0 1.8E-38 3.9E-43 340.1 23.9 262 251-529 168-460 (461)
106 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4E-39 8.7E-44 333.9 18.2 266 250-533 13-307 (343)
107 PHA03207 serine/threonine kina 100.0 1.4E-38 2.9E-43 336.3 22.0 263 251-530 91-381 (392)
108 PTZ00267 NIMA-related protein 100.0 2E-38 4.3E-43 343.3 23.7 249 253-528 68-327 (478)
109 PTZ00283 serine/threonine prot 100.0 1.2E-38 2.5E-43 345.9 21.7 249 248-518 28-296 (496)
110 cd05575 STKc_SGK Catalytic dom 100.0 9.1E-39 2E-43 328.7 19.7 247 258-534 1-261 (323)
111 cd05052 PTKc_Abl Catalytic dom 100.0 1.9E-38 4.1E-43 316.0 21.2 248 252-522 6-261 (263)
112 PF00069 Pkinase: Protein kina 100.0 2.5E-38 5.4E-43 313.3 21.8 251 254-527 1-260 (260)
113 KOG2345 Serine/threonine prote 100.0 9.6E-40 2.1E-44 305.8 10.8 258 251-522 20-299 (302)
114 cd05059 PTKc_Tec_like Catalyti 100.0 2.3E-38 5E-43 314.1 21.3 245 253-520 5-255 (256)
115 cd06625 STKc_MEKK3_like Cataly 100.0 4.7E-38 1E-42 312.3 23.5 251 252-527 2-263 (263)
116 cd05049 PTKc_Trk Catalytic dom 100.0 1.7E-38 3.7E-43 318.7 20.5 248 252-521 5-279 (280)
117 cd06619 PKc_MKK5 Catalytic dom 100.0 2E-38 4.4E-43 318.9 21.0 254 252-531 1-260 (279)
118 cd06637 STKc_TNIK Catalytic do 100.0 1.7E-38 3.6E-43 317.4 20.1 250 250-527 4-272 (272)
119 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.6E-38 5.7E-43 325.9 22.2 253 258-534 1-270 (327)
120 cd05627 STKc_NDR2 Catalytic do 100.0 9.6E-39 2.1E-43 333.5 19.0 261 252-534 1-303 (360)
121 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.6E-38 5.7E-43 314.0 21.1 247 252-521 4-256 (256)
122 cd05607 STKc_GRK7 Catalytic do 100.0 6.6E-38 1.4E-42 315.1 24.3 251 260-532 1-262 (277)
123 KOG0589 Serine/threonine prote 100.0 2.5E-39 5.4E-44 332.5 14.0 244 252-519 4-258 (426)
124 cd05630 STKc_GRK6 Catalytic do 100.0 3.4E-38 7.4E-43 318.6 22.2 250 254-530 2-267 (285)
125 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.8E-38 8.3E-43 313.1 22.1 247 252-522 6-259 (260)
126 cd05582 STKc_RSK_N N-terminal 100.0 4.3E-39 9.4E-44 330.3 15.7 245 258-532 2-262 (318)
127 cd07867 STKc_CDC2L6 Catalytic 100.0 2.9E-38 6.3E-43 323.2 21.7 258 258-527 7-317 (317)
128 cd08228 STKc_Nek6 Catalytic do 100.0 5.4E-38 1.2E-42 312.9 23.0 251 252-523 2-265 (267)
129 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.8E-38 6E-43 334.1 22.1 251 251-522 36-396 (400)
130 KOG0667 Dual-specificity tyros 100.0 8.4E-39 1.8E-43 336.3 17.9 263 253-532 187-510 (586)
131 cd05615 STKc_cPKC_alpha Cataly 100.0 2.8E-38 6.1E-43 325.2 21.5 251 253-533 1-266 (323)
132 cd05622 STKc_ROCK1 Catalytic d 100.0 1.8E-38 3.9E-43 332.9 20.2 260 247-531 38-311 (371)
133 cd05090 PTKc_Ror1 Catalytic do 100.0 3.3E-38 7.1E-43 317.7 21.3 249 252-522 5-282 (283)
134 cd05071 PTKc_Src Catalytic dom 100.0 4.6E-38 9.9E-43 313.4 22.0 247 252-522 6-259 (262)
135 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.7E-38 3.7E-43 315.3 18.7 248 251-522 5-260 (261)
136 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.4E-38 7.4E-43 320.8 21.1 267 252-533 6-295 (301)
137 cd05062 PTKc_IGF-1R Catalytic 100.0 3.3E-38 7.3E-43 316.6 20.4 251 250-522 4-277 (277)
138 cd05108 PTKc_EGFR Catalytic do 100.0 3.8E-38 8.3E-43 322.9 20.9 250 252-524 7-269 (316)
139 cd05604 STKc_SGK3 Catalytic do 100.0 1.8E-38 3.8E-43 326.8 18.4 249 258-532 1-259 (325)
140 cd05602 STKc_SGK1 Catalytic do 100.0 2.7E-38 5.9E-43 325.5 19.7 251 258-534 1-261 (325)
141 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.1E-38 1.3E-42 311.6 21.5 248 251-522 5-259 (260)
142 cd05603 STKc_SGK2 Catalytic do 100.0 2.4E-38 5.2E-43 325.2 19.1 247 258-534 1-261 (321)
143 KOG0690 Serine/threonine prote 100.0 3.3E-39 7.2E-44 311.7 11.7 260 252-541 168-441 (516)
144 cd07839 STKc_CDK5 Catalytic do 100.0 3.9E-38 8.5E-43 316.9 20.1 261 253-527 1-284 (284)
145 KOG1095 Protein tyrosine kinas 100.0 9.8E-39 2.1E-43 355.4 17.0 252 253-526 693-964 (1025)
146 cd05091 PTKc_Ror2 Catalytic do 100.0 2.8E-38 6.1E-43 318.0 18.7 248 253-522 6-282 (283)
147 cd05084 PTKc_Fes Catalytic dom 100.0 6.9E-38 1.5E-42 309.6 21.2 241 259-521 2-251 (252)
148 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-37 2.5E-42 314.6 23.2 253 254-533 2-270 (285)
149 cd05033 PTKc_EphR Catalytic do 100.0 8.1E-38 1.7E-42 311.8 21.7 249 252-522 4-264 (266)
150 cd07861 STKc_CDK1_euk Catalyti 100.0 7E-38 1.5E-42 315.1 21.4 259 253-527 1-285 (285)
151 cd08529 STKc_FA2-like Catalyti 100.0 1.1E-37 2.4E-42 308.2 22.3 242 253-518 1-252 (256)
152 cd05069 PTKc_Yes Catalytic dom 100.0 1.5E-37 3.3E-42 308.9 23.0 247 252-522 6-259 (260)
153 cd05093 PTKc_TrkB Catalytic do 100.0 6.2E-38 1.4E-42 316.8 20.4 250 252-523 5-279 (288)
154 cd05034 PTKc_Src_like Catalyti 100.0 1.2E-37 2.6E-42 309.3 21.7 249 251-522 5-260 (261)
155 cd05054 PTKc_VEGFR Catalytic d 100.0 3.6E-38 7.8E-43 326.4 18.7 250 252-522 7-332 (337)
156 cd06654 STKc_PAK1 Catalytic do 100.0 1.9E-37 4E-42 314.9 23.4 254 251-531 19-277 (296)
157 KOG0194 Protein tyrosine kinas 100.0 8.8E-39 1.9E-43 334.3 13.9 250 252-524 157-421 (474)
158 cd05597 STKc_DMPK_like Catalyt 100.0 1.8E-37 4E-42 320.2 23.6 260 252-535 1-277 (331)
159 PF07714 Pkinase_Tyr: Protein 100.0 3.2E-38 6.9E-43 314.3 17.0 242 257-520 4-259 (259)
160 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.6E-38 1.4E-42 319.7 19.7 255 252-528 18-304 (307)
161 KOG1989 ARK protein kinase fam 100.0 3.9E-38 8.5E-43 340.9 18.9 252 251-522 36-310 (738)
162 cd05045 PTKc_RET Catalytic dom 100.0 1.2E-37 2.5E-42 315.0 21.0 248 253-522 1-285 (290)
163 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-37 2.3E-42 315.6 20.6 251 252-524 5-283 (291)
164 cd06612 STKc_MST1_2 Catalytic 100.0 2.2E-37 4.7E-42 306.1 22.3 248 252-527 3-256 (256)
165 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.8E-37 1E-41 305.6 24.8 252 252-524 2-266 (267)
166 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-37 3.1E-42 312.2 21.2 251 251-522 5-277 (277)
167 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.6E-37 3.5E-42 312.1 21.4 255 252-533 1-270 (283)
168 cd06624 STKc_ASK Catalytic dom 100.0 3.3E-37 7.1E-42 307.8 23.4 253 249-527 5-268 (268)
169 cd08227 PK_STRAD_alpha Pseudok 100.0 2.4E-37 5.2E-42 318.6 23.0 260 256-530 2-313 (327)
170 cd05061 PTKc_InsR Catalytic do 100.0 1.5E-37 3.3E-42 314.0 20.9 258 251-530 5-286 (288)
171 cd06615 PKc_MEK Catalytic doma 100.0 3.8E-37 8.3E-42 314.4 24.0 259 252-530 1-293 (308)
172 cd05586 STKc_Sck1_like Catalyt 100.0 3.4E-38 7.4E-43 325.3 16.2 245 260-533 1-262 (330)
173 cd08229 STKc_Nek7 Catalytic do 100.0 2.1E-37 4.7E-42 308.5 21.4 251 252-523 2-265 (267)
174 cd06656 STKc_PAK3 Catalytic do 100.0 3.4E-37 7.4E-42 313.2 23.1 254 251-531 18-276 (297)
175 cd06638 STKc_myosinIIIA Cataly 100.0 1.8E-37 4E-42 312.4 20.9 259 242-527 8-286 (286)
176 cd06639 STKc_myosinIIIB Cataly 100.0 3.3E-37 7.3E-42 311.6 22.7 260 242-528 12-291 (291)
177 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-37 3.2E-42 311.4 19.9 249 251-521 5-276 (277)
178 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-37 4.4E-42 320.0 21.5 260 252-535 1-277 (332)
179 cd05055 PTKc_PDGFR Catalytic d 100.0 1.9E-37 4.1E-42 315.8 21.0 251 251-522 34-300 (302)
180 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2E-37 4.3E-42 311.7 20.7 257 243-527 7-282 (282)
181 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-37 2.9E-42 321.2 19.9 259 252-534 1-276 (331)
182 cd05116 PTKc_Syk Catalytic dom 100.0 2.9E-37 6.3E-42 306.4 21.5 242 259-522 2-254 (257)
183 KOG0574 STE20-like serine/thre 100.0 1.3E-39 2.8E-44 311.6 4.3 249 254-530 35-289 (502)
184 cd06631 STKc_YSK4 Catalytic do 100.0 4.1E-37 8.8E-42 306.4 22.5 253 253-527 1-265 (265)
185 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.4E-37 1.2E-41 310.1 23.6 263 251-527 4-291 (291)
186 cd05035 PTKc_Axl_like Catalyti 100.0 3E-37 6.6E-42 308.0 21.5 247 254-522 1-271 (273)
187 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.6E-37 9.9E-42 306.2 22.7 251 253-527 1-267 (267)
188 cd07844 STKc_PCTAIRE_like Cata 100.0 3.2E-37 6.8E-42 311.6 21.8 262 252-527 5-291 (291)
189 cd05097 PTKc_DDR_like Catalyti 100.0 3.1E-37 6.7E-42 312.8 21.7 256 252-522 5-295 (295)
190 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-37 2.6E-42 315.0 18.7 250 251-522 11-290 (293)
191 cd05111 PTK_HER3 Pseudokinase 100.0 3.8E-37 8.2E-42 309.8 22.1 248 252-522 7-267 (279)
192 cd05039 PTKc_Csk_like Catalyti 100.0 4.3E-37 9.3E-42 304.6 22.1 243 252-522 6-255 (256)
193 cd06646 STKc_MAP4K5 Catalytic 100.0 4.3E-37 9.3E-42 306.5 22.3 249 251-519 8-265 (267)
194 cd05075 PTKc_Axl Catalytic dom 100.0 2.3E-37 5.1E-42 309.1 20.4 247 254-522 1-270 (272)
195 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.1E-37 4.5E-42 315.4 20.4 250 251-522 14-295 (304)
196 PLN00113 leucine-rich repeat r 100.0 4.3E-37 9.3E-42 360.3 25.7 260 250-523 688-951 (968)
197 cd08223 STKc_Nek4 Catalytic do 100.0 8.6E-37 1.9E-41 302.2 23.8 246 253-527 1-257 (257)
198 cd05092 PTKc_TrkA Catalytic do 100.0 2.5E-37 5.5E-42 311.1 20.3 248 252-521 5-279 (280)
199 cd05089 PTKc_Tie1 Catalytic do 100.0 2E-37 4.4E-42 314.6 19.8 246 252-522 2-274 (297)
200 cd05073 PTKc_Hck Catalytic dom 100.0 3.9E-37 8.5E-42 306.0 21.3 248 251-522 5-259 (260)
201 KOG0596 Dual specificity; seri 100.0 3.6E-38 7.7E-43 323.2 14.0 253 251-529 360-632 (677)
202 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-36 2.4E-41 305.8 24.7 255 253-536 5-265 (277)
203 cd05065 PTKc_EphR_B Catalytic 100.0 2.3E-37 5E-42 309.0 19.7 251 253-522 5-267 (269)
204 cd05051 PTKc_DDR Catalytic dom 100.0 4.7E-37 1E-41 310.9 22.0 257 251-522 4-296 (296)
205 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.2E-37 4.8E-42 310.7 19.3 251 253-532 5-261 (277)
206 cd05085 PTKc_Fer Catalytic dom 100.0 6.4E-37 1.4E-41 302.1 22.3 240 259-521 2-249 (250)
207 cd06655 STKc_PAK2 Catalytic do 100.0 7.2E-37 1.6E-41 310.7 23.2 253 252-531 19-276 (296)
208 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.6E-37 1E-41 306.5 21.3 251 251-522 4-266 (268)
209 cd05050 PTKc_Musk Catalytic do 100.0 3.5E-37 7.5E-42 311.0 20.6 250 251-522 4-288 (288)
210 cd05082 PTKc_Csk Catalytic dom 100.0 5.3E-37 1.1E-41 304.2 21.6 242 252-522 6-255 (256)
211 KOG1094 Discoidin domain recep 100.0 2.4E-37 5.2E-42 318.1 19.6 257 252-523 538-804 (807)
212 KOG0579 Ste20-like serine/thre 100.0 1.1E-38 2.4E-43 329.4 9.8 250 252-528 32-293 (1187)
213 cd06611 STKc_SLK_like Catalyti 100.0 5.3E-37 1.2E-41 308.2 21.9 258 251-535 4-273 (280)
214 cd06609 STKc_MST3_like Catalyt 100.0 3.7E-37 8E-42 308.4 20.6 254 252-533 1-260 (274)
215 KOG0577 Serine/threonine prote 100.0 1.2E-38 2.6E-43 327.5 9.6 238 254-518 28-277 (948)
216 cd05112 PTKc_Itk Catalytic dom 100.0 6.4E-37 1.4E-41 303.2 21.7 247 252-521 4-256 (256)
217 cd06645 STKc_MAP4K3 Catalytic 100.0 5.6E-37 1.2E-41 305.7 21.4 247 252-518 9-264 (267)
218 cd07860 STKc_CDK2_3 Catalytic 100.0 3.9E-37 8.5E-42 309.6 20.5 259 253-527 1-284 (284)
219 PTZ00266 NIMA-related protein 100.0 3E-37 6.5E-42 347.1 21.6 255 250-530 11-301 (1021)
220 cd05060 PTKc_Syk_like Catalyti 100.0 6.6E-37 1.4E-41 303.6 21.7 244 258-523 1-255 (257)
221 cd07850 STKc_JNK Catalytic dom 100.0 5.2E-37 1.1E-41 319.6 21.8 267 250-532 14-319 (353)
222 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-36 2.3E-41 303.9 23.2 251 252-528 2-265 (266)
223 cd05043 PTK_Ryk Pseudokinase d 100.0 3.9E-37 8.5E-42 309.2 20.1 252 251-524 5-277 (280)
224 PHA03210 serine/threonine kina 100.0 2.3E-37 4.9E-42 336.6 19.6 275 251-538 147-468 (501)
225 cd06644 STKc_STK10_LOK Catalyt 100.0 1.3E-36 2.8E-41 307.7 23.8 254 252-532 12-277 (292)
226 cd06608 STKc_myosinIII_like Ca 100.0 6.4E-37 1.4E-41 305.5 21.2 251 250-527 4-275 (275)
227 cd05095 PTKc_DDR2 Catalytic do 100.0 5.5E-37 1.2E-41 311.1 21.1 256 252-522 5-296 (296)
228 cd05574 STKc_phototropin_like 100.0 9.4E-37 2E-41 312.2 23.0 260 253-535 2-300 (316)
229 cd06630 STKc_MEKK1 Catalytic d 100.0 8.9E-37 1.9E-41 304.0 22.2 256 253-528 1-268 (268)
230 cd07837 STKc_CdkB_plant Cataly 100.0 9E-37 2E-41 308.7 22.4 263 252-528 1-295 (295)
231 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.6E-37 1E-41 314.6 20.5 250 252-523 12-293 (314)
232 cd08219 STKc_Nek3 Catalytic do 100.0 7.2E-37 1.6E-41 302.9 21.1 243 253-519 1-252 (255)
233 cd05109 PTKc_HER2 Catalytic do 100.0 6.3E-37 1.4E-41 307.7 20.9 250 252-524 7-269 (279)
234 cd06616 PKc_MKK4 Catalytic dom 100.0 5.9E-37 1.3E-41 309.2 20.7 256 253-532 5-275 (288)
235 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.1E-37 8.8E-42 325.2 20.2 250 252-522 37-398 (401)
236 cd06605 PKc_MAPKK Catalytic do 100.0 5.8E-37 1.3E-41 304.8 20.1 253 253-530 2-263 (265)
237 cd06613 STKc_MAP4K3_like Catal 100.0 2E-36 4.4E-41 300.2 24.0 247 252-518 3-259 (262)
238 cd00192 PTKc Catalytic domain 100.0 9.1E-37 2E-41 301.6 21.3 242 258-521 1-262 (262)
239 cd06643 STKc_SLK Catalytic dom 100.0 1.1E-36 2.4E-41 306.5 22.3 250 254-530 7-268 (282)
240 KOG0983 Mitogen-activated prot 100.0 3.1E-37 6.7E-42 292.2 17.0 244 254-518 94-348 (391)
241 cd07832 STKc_CCRK Catalytic do 100.0 1.5E-36 3.1E-41 305.4 23.0 261 253-527 1-285 (286)
242 cd05041 PTKc_Fes_like Catalyti 100.0 1.3E-36 2.9E-41 300.0 22.2 242 258-521 1-250 (251)
243 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.9E-36 6.3E-41 303.2 25.1 261 252-527 1-286 (286)
244 cd07843 STKc_CDC2L1 Catalytic 100.0 1.2E-36 2.6E-41 307.9 22.3 261 252-527 5-293 (293)
245 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.5E-37 9.8E-42 309.7 19.0 254 253-522 5-282 (284)
246 cd05066 PTKc_EphR_A Catalytic 100.0 8.8E-37 1.9E-41 304.7 20.8 250 252-522 4-265 (267)
247 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.5E-37 1.4E-41 308.3 19.9 259 252-522 4-282 (284)
248 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9E-37 2E-41 307.5 20.9 253 252-531 1-269 (286)
249 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.7E-37 1E-41 318.8 19.3 250 252-522 7-338 (343)
250 cd06607 STKc_TAO Catalytic dom 100.0 2.5E-36 5.3E-41 308.1 24.3 249 252-532 15-275 (307)
251 PRK13184 pknD serine/threonine 100.0 1.4E-36 3.1E-41 340.3 24.5 252 252-520 2-287 (932)
252 cd05088 PTKc_Tie2 Catalytic do 100.0 4.3E-37 9.4E-42 313.3 18.6 245 252-521 7-278 (303)
253 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.6E-37 1.4E-41 308.6 19.7 254 252-529 5-271 (284)
254 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.3E-36 9.4E-41 303.2 25.6 260 252-531 1-273 (287)
255 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.8E-36 3.9E-41 302.9 22.5 253 253-527 2-272 (272)
256 PLN00009 cyclin-dependent kina 100.0 2.2E-36 4.8E-41 306.1 23.3 266 252-531 2-291 (294)
257 cd07841 STKc_CDK7 Catalytic do 100.0 2.1E-36 4.6E-41 306.6 23.2 264 253-531 1-289 (298)
258 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.4E-36 5.1E-41 301.9 23.0 245 259-521 2-268 (269)
259 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.2E-36 6.8E-41 299.4 23.7 255 252-527 1-267 (267)
260 cd06652 STKc_MEKK2 Catalytic d 100.0 2.9E-36 6.3E-41 300.4 23.5 250 252-527 2-264 (265)
261 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-36 4E-41 301.1 21.9 241 260-522 3-254 (257)
262 cd05044 PTKc_c-ros Catalytic d 100.0 1.1E-36 2.4E-41 303.7 20.1 242 259-522 2-269 (269)
263 cd07831 STKc_MOK Catalytic dom 100.0 2.9E-36 6.2E-41 302.7 23.1 256 254-527 1-282 (282)
264 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.5E-37 1.2E-41 308.7 17.8 261 252-527 1-286 (286)
265 cd07842 STKc_CDK8_like Catalyt 100.0 1.9E-36 4.2E-41 309.2 22.1 264 253-527 1-316 (316)
266 cd08218 STKc_Nek1 Catalytic do 100.0 2E-36 4.4E-41 299.6 21.3 246 253-527 1-256 (256)
267 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-36 3.2E-41 303.8 20.4 239 259-522 2-267 (270)
268 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 9.6E-37 2.1E-41 306.2 19.1 256 252-523 4-283 (284)
269 cd05083 PTKc_Chk Catalytic dom 100.0 1.6E-36 3.4E-41 300.5 20.2 241 252-522 6-253 (254)
270 cd06641 STKc_MST3 Catalytic do 100.0 3.4E-36 7.3E-41 302.2 22.9 252 253-533 5-262 (277)
271 cd05580 STKc_PKA Catalytic dom 100.0 3.9E-36 8.4E-41 304.0 23.5 250 252-534 1-264 (290)
272 cd08217 STKc_Nek2 Catalytic do 100.0 3.5E-36 7.6E-41 298.2 22.7 245 253-518 1-261 (265)
273 cd07836 STKc_Pho85 Catalytic d 100.0 2.5E-36 5.3E-41 303.6 21.9 260 253-527 1-284 (284)
274 cd07849 STKc_ERK1_2_like Catal 100.0 7E-37 1.5E-41 316.3 18.3 270 250-531 3-299 (336)
275 cd08220 STKc_Nek8 Catalytic do 100.0 2.3E-36 4.9E-41 298.8 21.1 246 253-527 1-256 (256)
276 cd05040 PTKc_Ack_like Catalyti 100.0 2.2E-36 4.8E-41 299.5 21.0 243 258-521 1-256 (257)
277 cd07835 STKc_CDK1_like Catalyt 100.0 2.4E-36 5.1E-41 303.8 21.4 258 254-527 1-283 (283)
278 cd07845 STKc_CDK10 Catalytic d 100.0 2.7E-36 5.9E-41 307.9 22.1 265 251-530 6-296 (309)
279 cd08221 STKc_Nek9 Catalytic do 100.0 4.2E-36 9.1E-41 297.3 22.8 242 253-518 1-252 (256)
280 cd07833 STKc_CDKL Catalytic do 100.0 2E-36 4.4E-41 304.7 20.5 261 253-527 2-288 (288)
281 cd06647 STKc_PAK_I Catalytic d 100.0 4.2E-36 9.2E-41 304.5 22.7 256 252-534 19-279 (293)
282 cd05042 PTKc_Aatyk Catalytic d 100.0 4.9E-36 1.1E-40 299.5 22.8 245 259-521 2-268 (269)
283 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.5E-36 5.4E-41 311.9 21.0 250 252-523 12-293 (334)
284 cd07865 STKc_CDK9 Catalytic do 100.0 4.1E-36 8.8E-41 305.7 22.2 266 251-527 11-310 (310)
285 cd06623 PKc_MAPKK_plant_like C 100.0 4.3E-36 9.3E-41 298.0 21.7 252 252-530 1-262 (264)
286 cd06632 STKc_MEKK1_plant Catal 100.0 3.7E-36 8E-41 297.4 21.1 246 253-527 1-258 (258)
287 cd06917 STKc_NAK1_like Catalyt 100.0 4.8E-36 1E-40 300.6 22.1 251 253-531 2-262 (277)
288 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-36 2.4E-41 308.7 17.6 255 254-535 24-283 (292)
289 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.2E-36 1.3E-40 296.2 22.4 232 259-521 2-259 (259)
290 KOG4236 Serine/threonine prote 100.0 9.4E-37 2E-41 310.0 16.7 254 257-538 569-833 (888)
291 cd07852 STKc_MAPK15 Catalytic 100.0 1.6E-36 3.4E-41 313.7 18.7 272 250-531 5-302 (337)
292 KOG0696 Serine/threonine prote 100.0 3.2E-37 7E-42 305.7 12.9 270 252-546 349-629 (683)
293 cd07879 STKc_p38delta_MAPK13 C 100.0 1.4E-36 3E-41 315.1 18.3 267 251-534 14-307 (342)
294 cd05058 PTKc_Met_Ron Catalytic 100.0 4.1E-36 8.9E-41 298.4 20.9 245 258-522 1-258 (262)
295 cd05046 PTK_CCK4 Pseudokinase 100.0 4.2E-36 9.1E-41 300.7 20.7 248 252-521 5-274 (275)
296 PHA02882 putative serine/threo 100.0 1.4E-35 3E-40 301.0 24.7 259 251-521 11-294 (294)
297 cd06614 STKc_PAK Catalytic dom 100.0 8E-36 1.7E-40 300.8 22.7 259 250-535 17-281 (286)
298 cd06626 STKc_MEKK4 Catalytic d 100.0 9.2E-36 2E-40 295.8 22.8 253 253-527 1-264 (264)
299 cd05572 STKc_cGK_PKG Catalytic 100.0 4.2E-36 9E-41 298.6 20.2 245 260-531 1-259 (262)
300 cd06618 PKc_MKK7 Catalytic dom 100.0 7.6E-36 1.6E-40 302.8 22.4 257 252-535 15-284 (296)
301 cd08225 STKc_Nek5 Catalytic do 100.0 3E-36 6.6E-41 298.1 18.9 247 253-527 1-257 (257)
302 KOG4279 Serine/threonine prote 100.0 5E-37 1.1E-41 320.1 13.8 245 259-529 582-837 (1226)
303 cd08226 PK_STRAD_beta Pseudoki 100.0 1.3E-35 2.8E-40 305.9 24.2 266 259-533 5-317 (328)
304 cd06659 STKc_PAK6 Catalytic do 100.0 2.6E-36 5.7E-41 306.7 18.7 253 256-535 25-282 (297)
305 smart00219 TyrKc Tyrosine kina 100.0 9.1E-36 2E-40 294.3 22.1 244 254-520 1-258 (258)
306 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.5E-36 1.2E-40 311.0 21.2 271 243-532 8-308 (345)
307 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.1E-35 2.3E-40 296.6 22.5 233 259-520 2-261 (262)
308 cd05057 PTKc_EGFR_like Catalyt 100.0 7.2E-36 1.6E-40 300.0 21.3 249 252-523 7-268 (279)
309 cd07840 STKc_CDK9_like Catalyt 100.0 9.6E-36 2.1E-40 299.1 21.5 260 254-527 1-287 (287)
310 KOG4278 Protein tyrosine kinas 100.0 8.4E-37 1.8E-41 315.0 14.0 247 253-522 268-522 (1157)
311 KOG0604 MAP kinase-activated p 100.0 1.6E-36 3.6E-41 290.6 15.0 256 250-531 59-329 (400)
312 cd07855 STKc_ERK5 Catalytic do 100.0 3.1E-36 6.8E-41 311.2 18.3 273 251-534 4-304 (334)
313 KOG4257 Focal adhesion tyrosin 100.0 2.2E-36 4.8E-41 312.6 16.7 246 254-523 391-649 (974)
314 cd05633 STKc_GRK3 Catalytic do 100.0 1.5E-35 3.2E-40 298.4 22.4 251 259-538 1-269 (279)
315 cd05609 STKc_MAST Catalytic do 100.0 2.5E-35 5.4E-40 300.4 24.4 261 252-531 1-280 (305)
316 cd05110 PTKc_HER4 Catalytic do 100.0 8.3E-36 1.8E-40 303.8 20.6 248 252-522 7-267 (303)
317 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4E-36 8.7E-41 310.9 18.5 265 251-531 4-298 (337)
318 KOG0584 Serine/threonine prote 100.0 9.6E-37 2.1E-41 318.1 13.8 247 258-532 46-304 (632)
319 cd06635 STKc_TAO1 Catalytic do 100.0 2.3E-35 5E-40 302.5 23.9 239 253-518 26-276 (317)
320 cd06606 STKc_MAPKKK Catalytic 100.0 2.4E-35 5.2E-40 290.5 22.9 250 253-527 1-260 (260)
321 PTZ00024 cyclin-dependent prot 100.0 1.3E-35 2.8E-40 306.5 21.9 271 251-531 7-320 (335)
322 cd08528 STKc_Nek10 Catalytic d 100.0 1.8E-35 3.8E-40 295.2 22.1 245 253-521 1-268 (269)
323 cd05578 STKc_Yank1 Catalytic d 100.0 3.6E-36 7.8E-41 298.4 17.0 247 253-527 1-258 (258)
324 cd07838 STKc_CDK4_6_like Catal 100.0 3.5E-35 7.7E-40 295.2 24.4 258 254-527 1-287 (287)
325 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.5E-35 3.2E-40 305.7 22.0 268 248-533 6-297 (328)
326 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.5E-36 9.7E-41 298.2 17.3 234 259-521 2-258 (258)
327 cd05056 PTKc_FAK Catalytic dom 100.0 1.2E-35 2.5E-40 296.9 20.2 247 252-522 6-264 (270)
328 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.1E-35 9E-40 293.1 24.1 245 259-521 2-267 (268)
329 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.1E-36 2E-40 309.1 19.7 267 249-533 12-307 (343)
330 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.5E-35 3.3E-40 297.6 20.6 234 259-521 2-274 (274)
331 PHA03390 pk1 serine/threonine- 100.0 5.4E-35 1.2E-39 292.4 24.4 249 247-528 9-266 (267)
332 cd05118 STKc_CMGC Catalytic do 100.0 2.5E-35 5.4E-40 295.8 22.0 259 254-527 1-283 (283)
333 KOG0586 Serine/threonine prote 100.0 5.2E-36 1.1E-40 312.3 17.6 255 251-538 55-320 (596)
334 cd05577 STKc_GRK Catalytic dom 100.0 2.5E-35 5.5E-40 295.9 22.1 246 260-532 1-262 (277)
335 cd06648 STKc_PAK_II Catalytic 100.0 3.7E-35 7.9E-40 296.4 23.2 253 253-532 20-277 (285)
336 cd07866 STKc_BUR1 Catalytic do 100.0 7.6E-36 1.7E-40 303.8 18.3 267 251-527 7-311 (311)
337 cd07864 STKc_CDK12 Catalytic d 100.0 2.4E-35 5.2E-40 299.3 21.7 263 250-527 5-302 (302)
338 cd06633 STKc_TAO3 Catalytic do 100.0 5.7E-35 1.2E-39 299.1 24.2 246 254-531 23-280 (313)
339 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.2E-35 4.7E-40 295.0 20.6 247 254-522 1-271 (273)
340 cd05122 PKc_STE Catalytic doma 100.0 5.2E-35 1.1E-39 286.9 22.3 243 253-518 1-250 (253)
341 KOG0986 G protein-coupled rece 100.0 1.2E-36 2.5E-41 305.5 10.6 267 252-545 185-468 (591)
342 KOG1035 eIF-2alpha kinase GCN2 100.0 4E-36 8.7E-41 331.4 15.6 251 248-518 475-870 (1351)
343 cd08216 PK_STRAD Pseudokinase 100.0 5.9E-35 1.3E-39 298.4 23.3 267 259-535 9-306 (314)
344 cd07834 STKc_MAPK Catalytic do 100.0 1.4E-35 3E-40 305.4 18.7 269 253-533 1-298 (330)
345 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.7E-35 3.6E-40 306.9 18.4 270 251-530 4-306 (342)
346 cd07857 STKc_MPK1 Catalytic do 100.0 3.5E-35 7.5E-40 303.2 20.3 267 253-531 1-299 (332)
347 KOG1006 Mitogen-activated prot 100.0 7.8E-37 1.7E-41 288.5 7.1 264 239-532 58-335 (361)
348 KOG0196 Tyrosine kinase, EPH ( 100.0 8.6E-37 1.9E-41 323.1 8.1 244 256-522 633-890 (996)
349 cd05606 STKc_beta_ARK Catalyti 100.0 9E-35 1.9E-39 292.5 22.5 249 259-536 1-267 (278)
350 cd08215 STKc_Nek Catalytic dom 100.0 6.7E-35 1.4E-39 287.6 20.8 246 253-527 1-258 (258)
351 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-34 3.1E-39 292.2 23.4 259 253-536 1-280 (290)
352 cd07830 STKc_MAK_like Catalyti 100.0 8.5E-35 1.8E-39 292.3 21.4 259 254-527 1-283 (283)
353 KOG0612 Rho-associated, coiled 100.0 6E-36 1.3E-40 327.6 13.8 273 246-545 69-358 (1317)
354 cd05579 STKc_MAST_like Catalyt 100.0 3E-35 6.6E-40 291.5 17.5 248 260-530 1-263 (265)
355 cd05581 STKc_PDK1 Catalytic do 100.0 4E-35 8.6E-40 293.6 18.4 251 252-527 1-280 (280)
356 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-34 2.8E-39 287.5 21.7 246 258-530 2-257 (260)
357 cd06634 STKc_TAO2 Catalytic do 100.0 7.2E-35 1.6E-39 297.6 20.3 246 253-530 16-273 (308)
358 cd06627 STKc_Cdc7_like Catalyt 100.0 1.5E-34 3.3E-39 284.9 21.8 246 253-527 1-254 (254)
359 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-34 2.4E-39 286.5 20.5 240 253-518 1-252 (256)
360 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.8E-34 3.8E-39 287.6 22.1 246 252-518 2-260 (264)
361 cd07829 STKc_CDK_like Catalyti 100.0 8.5E-35 1.8E-39 291.7 19.8 258 254-527 1-282 (282)
362 cd07851 STKc_p38 Catalytic dom 100.0 2.2E-35 4.8E-40 306.1 16.1 265 250-533 13-307 (343)
363 KOG0607 MAP kinase-interacting 100.0 5.2E-36 1.1E-40 289.1 10.5 271 243-533 74-370 (463)
364 cd06657 STKc_PAK4 Catalytic do 100.0 1.4E-34 3.1E-39 293.4 20.6 249 257-532 25-278 (292)
365 cd08222 STKc_Nek11 Catalytic d 100.0 7.2E-35 1.6E-39 289.3 18.1 245 253-527 1-260 (260)
366 KOG0614 cGMP-dependent protein 100.0 2.3E-36 4.9E-41 306.5 5.7 257 253-538 421-691 (732)
367 KOG0671 LAMMER dual specificit 100.0 1.5E-35 3.3E-40 292.9 10.0 262 250-529 87-411 (415)
368 KOG4645 MAPKKK (MAP kinase kin 100.0 4.3E-36 9.3E-41 332.5 6.3 261 247-531 1230-1501(1509)
369 cd05583 STKc_MSK_N N-terminal 100.0 8.6E-34 1.9E-38 286.3 22.3 260 253-534 1-276 (288)
370 KOG0199 ACK and related non-re 100.0 1.1E-34 2.4E-39 303.3 14.5 240 257-518 115-367 (1039)
371 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-33 2.7E-38 316.8 23.2 140 252-395 4-152 (669)
372 KOG0608 Warts/lats-like serine 100.0 4E-34 8.6E-39 296.2 17.6 260 253-534 630-938 (1034)
373 cd05123 STKc_AGC Catalytic dom 100.0 7E-34 1.5E-38 280.0 18.7 238 260-527 1-250 (250)
374 KOG0587 Traf2- and Nck-interac 100.0 1.1E-33 2.5E-38 303.6 20.4 262 246-534 13-292 (953)
375 KOG4250 TANK binding protein k 100.0 1.8E-34 3.8E-39 304.6 13.8 249 254-511 15-296 (732)
376 KOG0603 Ribosomal protein S6 k 100.0 2.1E-34 4.4E-39 301.9 13.6 240 251-527 321-566 (612)
377 KOG0666 Cyclin C-dependent kin 100.0 2.4E-34 5.1E-39 277.0 11.4 262 252-518 24-336 (438)
378 cd05576 STKc_RPK118_like Catal 100.0 2.6E-33 5.6E-38 275.2 18.2 224 263-527 4-237 (237)
379 KOG0662 Cyclin-dependent kinas 100.0 1.4E-33 3E-38 252.5 14.4 262 253-528 3-287 (292)
380 KOG0669 Cyclin T-dependent kin 100.0 3E-35 6.5E-40 275.8 2.9 268 252-531 17-322 (376)
381 KOG0695 Serine/threonine prote 100.0 3.9E-33 8.5E-38 270.4 14.9 195 251-454 249-453 (593)
382 PLN03225 Serine/threonine-prot 100.0 7.9E-33 1.7E-37 303.5 19.2 260 251-531 131-457 (566)
383 KOG3653 Transforming growth fa 100.0 4.2E-33 9.2E-38 281.8 14.2 260 253-524 211-504 (534)
384 KOG0668 Casein kinase II, alph 100.0 4.8E-33 1E-37 257.7 12.7 270 251-536 37-334 (338)
385 KOG2052 Activin A type IB rece 100.0 5.1E-32 1.1E-36 272.2 19.7 282 230-521 189-501 (513)
386 KOG1151 Tousled-like protein k 100.0 6.9E-33 1.5E-37 277.0 11.4 260 248-518 459-740 (775)
387 KOG0200 Fibroblast/platelet-de 100.0 5.1E-32 1.1E-36 299.8 19.0 249 252-522 296-578 (609)
388 KOG0984 Mitogen-activated prot 100.0 1.5E-31 3.2E-36 244.6 15.9 200 256-464 50-264 (282)
389 smart00220 S_TKc Serine/Threon 100.0 4E-31 8.7E-36 257.2 20.0 237 264-527 1-244 (244)
390 KOG1025 Epidermal growth facto 100.0 2.8E-32 6.1E-37 289.8 12.1 244 254-520 698-954 (1177)
391 PLN03224 probable serine/threo 100.0 6.8E-31 1.5E-35 282.0 19.4 256 251-529 144-505 (507)
392 KOG1027 Serine/threonine prote 100.0 7.9E-32 1.7E-36 288.2 10.1 242 254-518 511-766 (903)
393 KOG1024 Receptor-like protein 100.0 4.8E-31 1E-35 260.8 13.0 257 246-524 278-556 (563)
394 KOG1290 Serine/threonine prote 100.0 9.3E-30 2E-34 258.1 18.9 267 252-533 78-559 (590)
395 KOG0670 U4/U6-associated splic 100.0 7.6E-31 1.7E-35 267.1 6.8 270 243-528 423-750 (752)
396 KOG1167 Serine/threonine prote 100.0 1.4E-29 3.1E-34 253.8 11.5 278 246-532 30-389 (418)
397 KOG1152 Signal transduction se 100.0 1E-29 2.2E-34 261.9 9.9 191 252-453 561-770 (772)
398 KOG0665 Jun-N-terminal kinase 100.0 1.8E-29 4E-34 244.6 10.3 257 252-528 17-314 (369)
399 KOG0664 Nemo-like MAPK-related 100.0 1E-30 2.2E-35 247.7 1.5 263 252-523 53-347 (449)
400 cd00180 PKc Catalytic domain o 100.0 1.1E-27 2.4E-32 226.9 22.3 204 260-519 1-214 (215)
401 KOG1345 Serine/threonine kinas 100.0 6.9E-29 1.5E-33 235.4 9.9 251 249-518 21-283 (378)
402 KOG0576 Mitogen-activated prot 100.0 3.5E-29 7.5E-34 261.8 4.4 248 251-518 14-270 (829)
403 PLN00181 protein SPA1-RELATED; 99.9 3.3E-28 7.2E-33 278.9 10.9 203 303-530 28-271 (793)
404 smart00221 STYKc Protein kinas 99.9 1.3E-26 2.8E-31 223.6 20.2 193 254-454 1-202 (225)
405 smart00750 KIND kinase non-cat 99.9 1.3E-25 2.9E-30 209.8 14.4 165 331-530 1-171 (176)
406 KOG1164 Casein kinase (serine/ 99.9 3.6E-23 7.8E-28 212.8 19.8 256 253-522 19-296 (322)
407 KOG0590 Checkpoint kinase and 99.9 1.2E-24 2.7E-29 238.5 6.7 262 255-533 321-594 (601)
408 COG0515 SPS1 Serine/threonine 99.9 6.6E-22 1.4E-26 198.7 24.7 254 254-518 2-274 (384)
409 PRK09188 serine/threonine prot 99.9 2.2E-23 4.8E-28 215.3 13.6 167 249-427 15-195 (365)
410 KOG1163 Casein kinase (serine/ 99.9 2.9E-22 6.3E-27 187.6 11.5 258 251-520 14-281 (341)
411 KOG1165 Casein kinase (serine/ 99.9 8.8E-22 1.9E-26 192.1 15.3 201 253-457 29-241 (449)
412 KOG1240 Protein kinase contain 99.8 8.6E-22 1.9E-26 216.4 6.1 251 253-524 24-296 (1431)
413 KOG0603 Ribosomal protein S6 k 99.8 6E-22 1.3E-26 208.5 4.0 226 260-520 2-241 (612)
414 PRK12274 serine/threonine prot 99.8 3E-20 6.4E-25 175.9 14.0 191 254-457 4-212 (218)
415 PRK10359 lipopolysaccharide co 99.8 6.4E-21 1.4E-25 183.9 9.2 170 249-446 28-216 (232)
416 PF14531 Kinase-like: Kinase-l 99.8 1.5E-19 3.3E-24 179.4 17.7 225 254-510 14-288 (288)
417 KOG0195 Integrin-linked kinase 99.8 6.8E-21 1.5E-25 181.1 5.9 234 259-522 197-445 (448)
418 cd05147 RIO1_euk RIO kinase fa 99.8 9.4E-20 2E-24 172.9 11.1 133 257-396 2-166 (190)
419 cd05145 RIO1_like RIO kinase f 99.8 6.1E-19 1.3E-23 167.5 15.2 134 257-397 2-167 (190)
420 PRK10345 hypothetical protein; 99.8 6.5E-19 1.4E-23 169.1 15.0 136 254-394 4-156 (210)
421 KOG1023 Natriuretic peptide re 99.8 1.7E-18 3.7E-23 182.4 12.1 213 301-525 1-226 (484)
422 KOG4158 BRPK/PTEN-induced prot 99.8 2.7E-18 5.8E-23 171.2 11.9 196 305-517 274-508 (598)
423 KOG1166 Mitotic checkpoint ser 99.8 2.7E-18 5.9E-23 192.5 13.1 194 250-451 696-902 (974)
424 KOG0606 Microtubule-associated 99.8 6.5E-19 1.4E-23 194.0 6.1 220 250-518 81-311 (1205)
425 PRK14879 serine/threonine prot 99.7 7.4E-17 1.6E-21 155.3 13.9 132 258-396 2-143 (211)
426 cd05144 RIO2_C RIO kinase fami 99.7 1.6E-16 3.5E-21 151.8 12.4 135 251-396 14-174 (198)
427 smart00090 RIO RIO-like kinase 99.7 1.2E-16 2.7E-21 156.8 11.3 135 253-396 29-197 (237)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 4.3E-16 9.3E-21 148.7 13.9 128 259-396 1-138 (199)
429 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.1E-17 2.4E-22 173.3 2.7 171 321-516 330-509 (516)
430 PRK09605 bifunctional UGMP fam 99.7 3.5E-16 7.7E-21 171.8 14.3 134 252-396 333-476 (535)
431 cd05119 RIO RIO kinase family, 99.6 1.4E-15 3E-20 143.6 9.3 131 257-396 2-163 (187)
432 cd05120 APH_ChoK_like Aminogly 99.6 6.7E-15 1.4E-19 132.4 12.2 134 256-396 2-138 (155)
433 KOG0590 Checkpoint kinase and 99.6 2.4E-16 5.1E-21 173.4 -2.7 255 253-529 21-291 (601)
434 PRK01723 3-deoxy-D-manno-octul 99.5 4.2E-14 9.1E-19 139.1 12.9 133 257-396 36-191 (239)
435 KOG0601 Cyclin-dependent kinas 99.4 4.8E-13 1E-17 141.5 9.0 249 251-518 113-378 (524)
436 TIGR01982 UbiB 2-polyprenylphe 99.3 9.9E-12 2.2E-16 132.7 13.8 138 257-398 122-308 (437)
437 KOG1243 Protein kinase [Genera 99.3 9.5E-11 2.1E-15 125.4 17.3 166 272-448 33-199 (690)
438 cd05151 ChoK Choline Kinase (C 99.3 1.9E-11 4E-16 113.2 9.5 128 258-395 4-135 (170)
439 KOG1266 Protein kinase [Signal 99.3 1.1E-11 2.4E-16 121.9 7.7 197 301-518 121-330 (458)
440 cd01989 STK_N The N-terminal d 99.2 2.6E-10 5.6E-15 103.2 13.5 120 24-143 1-145 (146)
441 PRK04750 ubiB putative ubiquin 99.2 3.3E-11 7.2E-16 130.5 8.6 143 251-399 119-316 (537)
442 KOG0601 Cyclin-dependent kinas 99.1 3.9E-11 8.4E-16 127.2 4.7 243 247-519 260-514 (524)
443 cd05146 RIO3_euk RIO kinase fa 99.1 7E-10 1.5E-14 105.0 11.6 130 258-396 3-173 (197)
444 COG3642 Mn2+-dependent serine/ 99.1 1.4E-09 2.9E-14 100.1 12.6 128 259-396 3-140 (204)
445 KOG0606 Microtubule-associated 99.1 2.1E-11 4.6E-16 135.4 0.6 267 251-537 803-1105(1205)
446 cd05154 ACAD10_11_like Acyl-Co 99.0 1.2E-09 2.5E-14 105.5 10.5 138 258-395 4-205 (223)
447 KOG3087 Serine/threonine prote 99.0 6.4E-09 1.4E-13 95.3 12.9 137 256-396 11-165 (229)
448 PF01163 RIO1: RIO1 family; I 98.8 2.2E-08 4.8E-13 94.4 10.6 121 267-396 1-155 (188)
449 PF00582 Usp: Universal stress 98.8 8.9E-08 1.9E-12 84.4 12.4 117 23-141 3-139 (140)
450 COG4248 Uncharacterized protei 98.7 3.9E-07 8.4E-12 93.1 17.0 253 255-522 14-299 (637)
451 PRK15123 lipopolysaccharide co 98.7 4.1E-07 8.8E-12 90.8 15.5 134 258-395 28-193 (268)
452 KOG2137 Protein kinase [Signal 98.7 7.2E-09 1.6E-13 111.7 2.0 154 351-519 107-265 (700)
453 cd01987 USP_OKCHK USP domain i 98.6 4.3E-07 9.2E-12 79.5 11.3 115 24-141 1-123 (124)
454 COG0478 RIO-like serine/threon 98.6 2.6E-07 5.6E-12 90.1 9.4 130 255-394 94-249 (304)
455 KOG3741 Poly(A) ribonuclease s 98.6 3.8E-06 8.3E-11 88.1 18.3 160 266-451 290-475 (655)
456 PRK15005 universal stress prot 98.5 1.4E-06 3.1E-11 78.3 11.9 116 23-141 3-143 (144)
457 PRK15456 universal stress prot 98.5 1.3E-06 2.9E-11 78.5 11.5 115 23-141 3-141 (142)
458 PRK15118 universal stress glob 98.5 1.1E-06 2.4E-11 79.2 10.9 117 22-142 3-138 (144)
459 cd00293 USP_Like Usp: Universa 98.4 4.1E-06 8.9E-11 72.8 11.2 113 24-139 1-128 (130)
460 PRK09982 universal stress prot 98.4 3.5E-06 7.5E-11 75.9 10.7 115 23-141 4-137 (142)
461 PF06293 Kdo: Lipopolysacchari 98.3 3.7E-06 8E-11 80.8 11.2 103 291-396 55-170 (206)
462 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 6.2E-06 1.3E-10 80.4 12.7 131 258-395 7-181 (226)
463 PRK09902 hypothetical protein; 98.3 8.1E-06 1.7E-10 77.8 11.8 130 260-395 26-178 (216)
464 PF10707 YrbL-PhoP_reg: PhoP r 98.3 1.7E-05 3.6E-10 75.5 14.0 131 256-393 5-169 (199)
465 cd01988 Na_H_Antiporter_C The 98.2 1.9E-05 4E-10 69.5 12.4 116 24-141 1-131 (132)
466 PRK10116 universal stress prot 98.2 1.4E-05 2.9E-10 71.7 11.6 116 22-142 3-138 (142)
467 KOG0576 Mitogen-activated prot 98.2 1.6E-07 3.4E-12 100.5 -2.5 179 257-454 247-432 (829)
468 PF06176 WaaY: Lipopolysacchar 98.1 3.5E-05 7.7E-10 73.8 12.0 134 250-394 29-181 (229)
469 COG1718 RIO1 Serine/threonine 98.0 3.3E-05 7.2E-10 74.9 10.7 145 242-396 35-215 (268)
470 PF01636 APH: Phosphotransfera 98.0 6.1E-05 1.3E-09 72.8 11.5 136 258-395 3-196 (239)
471 COG0661 AarF Predicted unusual 97.9 5E-05 1.1E-09 82.3 10.5 134 258-397 131-315 (517)
472 cd05150 APH Aminoglycoside 3'- 97.9 0.00017 3.6E-09 71.0 12.7 69 260-331 6-76 (244)
473 COG2112 Predicted Ser/Thr prot 97.9 0.00011 2.5E-09 67.5 10.2 127 256-396 26-155 (201)
474 PF12260 PIP49_C: Protein-kina 97.8 8.1E-05 1.7E-09 70.4 8.8 96 296-397 8-112 (188)
475 PRK11175 universal stress prot 97.7 0.00023 5E-09 72.5 11.5 119 23-143 4-146 (305)
476 PLN02876 acyl-CoA dehydrogenas 97.7 0.00024 5.3E-09 82.3 12.5 141 257-397 43-258 (822)
477 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00033 7.2E-09 68.6 10.7 69 258-331 3-78 (235)
478 KOG1235 Predicted unusual prot 97.5 0.00061 1.3E-08 73.8 11.6 132 258-397 167-355 (538)
479 PF13095 FTA2: Kinetochore Sim 97.5 0.00095 2.1E-08 63.3 11.4 124 252-394 37-206 (207)
480 PRK05231 homoserine kinase; Pr 97.5 0.0026 5.6E-08 65.2 15.5 134 258-395 28-216 (319)
481 cd05157 ETNK_euk Ethanolamine 97.5 0.0013 2.8E-08 64.3 11.8 70 258-331 4-76 (235)
482 PRK10593 hypothetical protein; 97.4 0.0018 3.9E-08 65.9 12.8 73 257-331 19-97 (297)
483 cd05153 HomoserineK_II Homoser 97.4 0.00062 1.3E-08 69.0 8.9 135 257-395 19-204 (296)
484 PRK11175 universal stress prot 97.3 0.0024 5.3E-08 64.9 11.5 119 21-142 151-299 (305)
485 PRK09550 mtnK methylthioribose 97.2 0.0075 1.6E-07 63.6 14.8 72 258-331 32-115 (401)
486 TIGR02721 ycfN_thiK thiamine k 97.2 0.0015 3.3E-08 64.7 9.0 129 260-395 4-174 (256)
487 TIGR00938 thrB_alt homoserine 97.1 0.01 2.2E-07 60.6 14.6 135 257-394 27-215 (307)
488 PRK12652 putative monovalent c 97.1 0.0038 8.3E-08 64.7 11.3 95 22-117 5-124 (357)
489 KOG1035 eIF-2alpha kinase GCN2 97.1 0.0018 3.8E-08 74.6 9.0 190 294-518 229-433 (1351)
490 COG0589 UspA Universal stress 97.0 0.014 3E-07 52.2 12.5 119 22-142 5-151 (154)
491 KOG2268 Serine/threonine prote 96.8 0.0014 3.1E-08 65.8 4.3 143 241-394 78-249 (465)
492 cd05156 ChoK_euk Choline Kinas 96.7 0.0077 1.7E-07 61.2 9.7 69 259-331 5-81 (302)
493 KOG1093 Predicted protein kina 96.3 0.0092 2E-07 63.5 7.0 166 292-518 27-193 (725)
494 KOG2270 Serine/threonine prote 96.2 0.017 3.8E-07 59.2 8.3 133 258-396 150-313 (520)
495 PRK10490 sensor protein KdpD; 96.2 0.033 7.1E-07 65.4 11.7 112 21-133 249-365 (895)
496 cd05152 MPH2' Macrolide 2'-Pho 95.9 0.05 1.1E-06 54.7 9.9 45 260-305 19-63 (276)
497 PLN02236 choline kinase 95.9 0.057 1.2E-06 56.2 10.6 133 259-395 43-230 (344)
498 PRK11768 serine/threonine prot 95.7 0.46 1E-05 48.9 16.3 69 263-331 36-111 (325)
499 PLN02421 phosphotransferase, a 95.6 0.082 1.8E-06 54.6 10.3 69 259-331 21-94 (330)
500 TIGR02906 spore_CotS spore coa 95.5 0.2 4.4E-06 50.8 12.8 28 365-394 187-214 (313)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-52 Score=434.44 Aligned_cols=280 Identities=45% Similarity=0.775 Sum_probs=249.6
Q ss_pred CccccCHHHHHhhhcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEE
Q 008898 238 SSRRFTSQELCHLTHNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYC 316 (549)
Q Consensus 238 ~~~~~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~ 316 (549)
..+.|++.++..+|++|...++||+|+||.||+|...+|..+|||.+...... ..+|..|++++.+++|||+++|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999988999999988876554 66799999999999999999999999
Q ss_pred EcCC-eEEEEEecc-CCCHHHHHH-----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEe
Q 008898 317 HSKE-MYAIVYNLL-NGSLKQYLK-----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLS 389 (549)
Q Consensus 317 ~~~~-~~~lv~e~~-~gsL~~~l~-----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~ 389 (549)
.+.+ ..+|||||+ +|+|.++|. .++|..+++||.++|+||+|||+.+...||||||||+|||||+++ ++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-NAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC-CEEcc
Confidence 9988 599999999 899999983 468999999999999999999999888899999999999999996 89999
Q ss_pred eeccccccccccccccCcccccc-ccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCccc-chhhHHHHHH
Q 008898 390 DFGAAMVHHQSHQVSENVKPVNV-VGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKA-NRESLVLWAR 467 (549)
Q Consensus 390 DFGla~~~~~~~~~~~~~~~~~~-~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~-~~~~l~~~~~ 467 (549)
|||+|+..... .....+. .||++|+|||++..+..+.|+|||||||+|+||+||+++.+...+ ....+..|+.
T Consensus 220 DFGLa~~~~~~-----~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 220 DFGLAKLGPEG-----DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred CccCcccCCcc-----ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 99999554320 1111122 799999999999999999999999999999999999999987653 4556999999
Q ss_pred HhhcccccccccCCccc-ccCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 468 SLLSSGLCERLIDPQLN-EEYNR-EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~-~~~~~-~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
+....+.+.+++|+.+. ..+.. ++...+..++..|++.+|..||+|.+|++.|+..
T Consensus 295 ~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 295 PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 99999999999999987 66665 6889999999999999999999999999988443
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-48 Score=384.96 Aligned_cols=257 Identities=28% Similarity=0.409 Sum_probs=211.1
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecC--CcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC-eEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCT--NWSEEEVLREVELLSSIKHENIVRIIGYCHSKE-MYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-~~~lv~e~ 328 (549)
+.+..+.||+|..|+||++.| .+++.+|+|++... ....+++.+|++|++..+|||||.+||.|..+. ...|+|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 445567799999999999998 57999999999433 334578999999999999999999999999888 59999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
| +|+|+++++. +++.....++.+|++||.|||+ . +||||||||+|||++.. |++||||||.+....++
T Consensus 160 MDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNsk-GeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSK-GEVKICDFGVSGILVNS--- 232 (364)
T ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccC-CCEEeccccccHHhhhh---
Confidence 9 7899999976 8888899999999999999996 5 99999999999999998 89999999998654432
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
...+++||..|||||.+.+..|+.++||||||+.++|+.+|+.|+................+.. -.-|.+
T Consensus 233 ----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~------~ppP~l 302 (364)
T KOG0581|consen 233 ----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD------EPPPRL 302 (364)
T ss_pred ----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc------CCCCCC
Confidence 5568899999999999999999999999999999999999999998753222211111111111 112333
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
+.. .+...+..++..||++||.+||++.++++ |+|++.....+
T Consensus 303 P~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~-----Hpfi~~~~~~~ 345 (364)
T KOG0581|consen 303 PEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQ-----HPFIKKFEDPN 345 (364)
T ss_pred Ccc---cCCHHHHHHHHHHhcCCcccCCCHHHHhc-----CHHHhhccccc
Confidence 332 35566777889999999999999999999 99998766543
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-49 Score=389.64 Aligned_cols=256 Identities=25% Similarity=0.342 Sum_probs=207.2
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--------CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--------SEEEVLREVELLSSIKHENIVRIIGYCHSKEM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 321 (549)
.+.|.+.+.||+|+||.|-+|.. .+|+.||||++++... ....+.+|++||++|+|||||+++++|+..+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 45688889999999999999965 7899999999975421 22346799999999999999999999999999
Q ss_pred EEEEEecc-CCCHHHHHH---HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC--CCceEEeeecccc
Q 008898 322 YAIVYNLL-NGSLKQYLK---QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN--FHHPQLSDFGAAM 395 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~---~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~~kL~DFGla~ 395 (549)
.|+||||+ +|+|.+++- .+.+..-..+++|++.|+.|||+. ||+||||||+|||+..+ .-.+||+|||+|+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhh
Confidence 99999999 789999983 366666678999999999999999 99999999999999765 1268999999998
Q ss_pred ccccccccccCccccccccCCccccccccccCCC---CchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc
Q 008898 396 VHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKV---DEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS 472 (549)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~---~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 472 (549)
+... .....+.||||.|.|||++..+++ ..++|+||+||+||-+|+|.+||........... .+. .
T Consensus 328 ~~g~------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~e----QI~-~ 396 (475)
T KOG0615|consen 328 VSGE------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKE----QIL-K 396 (475)
T ss_pred cccc------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHH----HHh-c
Confidence 7543 334568899999999999987653 4588999999999999999999987654432111 111 1
Q ss_pred cccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 473 GLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 473 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
|... ..+.+-....+...++|.+||..||++|||+.|+++ |+||+...
T Consensus 397 G~y~------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~-----hpW~~~~~ 444 (475)
T KOG0615|consen 397 GRYA------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN-----HPWFKDAP 444 (475)
T ss_pred Cccc------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc-----Chhhhccc
Confidence 1110 111223455678889999999999999999999999 99998544
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-47 Score=397.30 Aligned_cols=249 Identities=28% Similarity=0.417 Sum_probs=211.7
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecC----CcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCT----NWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
..|...++||+|||++||.+.. .+|..||+|++.+. ....+.+.+|++|.++|+|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3588999999999999999988 78999999999763 344577899999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
|+| +|+|.+++++ +++.++..+..||+.||.|||++ +|||||||..|+||++++ ++||+|||+|.....
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~-~VKIgDFGLAt~le~--- 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENM-NVKIGDFGLATQLEY--- 170 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcC-cEEecccceeeeecC---
Confidence 999 8999999964 88999999999999999999999 999999999999999995 899999999976543
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
+..+..+.||||.|+|||++...+++..+||||+|||||-||.|++||+...-.. ....+ ...+..-
T Consensus 171 --~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-----ty~~I----k~~~Y~~-- 237 (592)
T KOG0575|consen 171 --DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-----TYNKI----KLNEYSM-- 237 (592)
T ss_pred --cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-----HHHHH----HhcCccc--
Confidence 3345568999999999999999999999999999999999999999998764321 11111 1112211
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
+........+||..+|++||.+|||+++|+. |+||+.-
T Consensus 238 -----P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~-----h~Ff~~g 275 (592)
T KOG0575|consen 238 -----PSHLSAEAKDLIRKLLRPNPSERPSLDEVLD-----HPFFKSG 275 (592)
T ss_pred -----ccccCHHHHHHHHHHhcCCcccCCCHHHHhc-----CHhhhCC
Confidence 1233445667889999999999999999998 8888443
No 5
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-47 Score=377.70 Aligned_cols=266 Identities=26% Similarity=0.332 Sum_probs=216.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
.++|++.++||+|+||+||.++. .+++.||+|++++... ..+....|..||..++||+||+++-.|++.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 35799999999999999999987 5699999999986543 235688999999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
++|+ +|.|.-+|++ +.+.....++..|+.||.|||++ +||||||||+|||||.+ |+++|+|||+|+..
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~-GHi~LtDFgL~k~~---- 175 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQ-GHIKLTDFGLCKED---- 175 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCC-CcEEEeccccchhc----
Confidence 9999 6799999974 78888888999999999999999 99999999999999999 89999999999643
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
...+....++|||+.|||||++.+.+|+.++|+||||+++|||++|.+||...+.. .+.+.+.... +
T Consensus 176 -~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~-----~~~~~I~~~k----~--- 242 (357)
T KOG0598|consen 176 -LKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK-----KMYDKILKGK----L--- 242 (357)
T ss_pred -ccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH-----HHHHHHhcCc----C---
Confidence 33444556799999999999999999999999999999999999999999876532 2222222222 0
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCC----CHHHHHHHhcCCchhhhhhhHHHHHHh-hccCCCC
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRP----TMKTLLKLFQEPDYWLKMKREKEELLN-ERRSNGP 545 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP----s~~evl~~L~~~~~w~~~~~~~~~~~~-~~~~~~~ 545 (549)
..++.-......+++...+..||++|. .+.+|-+ |+||+..++..-..+ ..+.+.|
T Consensus 243 ---~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~-----HpfF~~inW~~l~~k~l~PpF~P 303 (357)
T KOG0598|consen 243 ---PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR-----HPFFKGINWEKLLAKKLSPPFKP 303 (357)
T ss_pred ---CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc-----CcccccCCHHHHHhcCCCCCeec
Confidence 111112334567778999999999996 4555544 788888887776654 3334443
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=378.09 Aligned_cols=248 Identities=30% Similarity=0.481 Sum_probs=203.4
Q ss_pred CCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCC-eEEEEEecc-
Q 008898 255 SPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKE-MYAIVYNLL- 329 (549)
Q Consensus 255 ~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-~~~lv~e~~- 329 (549)
...+.||.|+||+||+|.+.....+|||++...... .+.|.+|+.+|++++|||||+++|+|.+.. .+++||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 344459999999999999865555999999865433 347999999999999999999999999887 799999999
Q ss_pred CCCHHHHHH-----HhchhHHHHHHHHHHHHHHHHHhCCCCC-EEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 330 NGSLKQYLK-----QLKWNERMDVAIGVAKALEYLHHTCDPP-IIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 330 ~gsL~~~l~-----~~~~~~~~~i~~~i~~aL~yLH~~~~~~-iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+|+|.+++. .+++..++.++.|||.||.|||++ + ||||||||+|||++.++.++||+|||+++......
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 899999993 378888999999999999999999 7 99999999999999993389999999997755432
Q ss_pred ccCccccccccCCccccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 404 SENVKPVNVVGTFGYLAPEYMM--YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~--~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.......||+.|||||++. ...|+.|+||||||++||||+||+.||......+.. .... ..
T Consensus 199 ---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~-----~~v~---------~~ 261 (362)
T KOG0192|consen 199 ---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVA-----SAVV---------VG 261 (362)
T ss_pred ---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHH-----HHHH---------hc
Confidence 2222368999999999999 568999999999999999999999999887652211 1111 11
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
.....++..+...+..++..||..||..||++.+++..|+...
T Consensus 262 ~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 262 GLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred CCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 1222223336667888889999999999999999999987654
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-45 Score=362.03 Aligned_cols=198 Identities=30% Similarity=0.492 Sum_probs=175.9
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
..+|...+.||+|+||+||+|.+ .++..||||.+.+.... .+-+..|+.||+.++|||||.+++++..++.+++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 35788888899999999999988 56899999999766422 345789999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC-----CceEEeeecccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF-----HHPQLSDFGAAMVH 397 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~-----~~~kL~DFGla~~~ 397 (549)
||| +|+|.+|+++ +++.....++.||+.||++||++ +||||||||+||||+... ..+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999 6899999965 67788889999999999999999 999999999999998641 25899999999875
Q ss_pred ccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCccc
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKA 457 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~ 457 (549)
.. .....+.||+|-|||||+++.+.|+.|+|+||+|+|+|+|++|++||+....
T Consensus 166 ~~------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 166 QP------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred Cc------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 53 4455688999999999999999999999999999999999999999987654
No 8
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-45 Score=381.90 Aligned_cols=265 Identities=21% Similarity=0.295 Sum_probs=214.9
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~l 324 (549)
.++|...++||+|.||+|+++.. .+++.||||+++++.. +.+..+.|..|+.... ||++++|++.|++.+.+|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 35799999999999999999987 5688999999998753 3456888999988775 9999999999999999999
Q ss_pred EEecc-CCCHHHHH--HHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 325 VYNLL-NGSLKQYL--KQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 325 v~e~~-~gsL~~~l--~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
||||+ +|+|..+. ..+++..+..++..|+.||+|||++ +|||||||.+|||||.+ |++||+|||+++.
T Consensus 447 vmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~e-Gh~kiADFGlcKe----- 517 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTE-GHVKIADFGLCKE----- 517 (694)
T ss_pred EEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEccc-CcEEecccccccc-----
Confidence 99999 56755544 3488888889999999999999999 99999999999999999 8999999999943
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
....+..+.++||||.|||||++.+..|+.++|+|||||+|||||.|..||.+++++. .+ ..+. ..|+
T Consensus 518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-~F----dsI~-------~d~~ 585 (694)
T KOG0694|consen 518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-VF----DSIV-------NDEV 585 (694)
T ss_pred cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-HH----HHHh-------cCCC
Confidence 3445557789999999999999999999999999999999999999999998776432 11 1111 1122
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhcCCchhhhhhhHHHHHHh-hccCCCC
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTM-----KTLLKLFQEPDYWLKMKREKEELLN-ERRSNGP 545 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~L~~~~~w~~~~~~~~~~~~-~~~~~~~ 545 (549)
.+ +.-+......+++.+|.++|++|..+ .+|.+ |++|+...+.+-..+ ..+++.|
T Consensus 586 ~y----P~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~-----hpFFr~i~w~~L~~r~i~PPf~P 646 (694)
T KOG0694|consen 586 RY----PRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKK-----HPFFRSIDWDDLLNRRIKPPFVP 646 (694)
T ss_pred CC----CCcccHHHHHHHHHHhccCcccccCCCCCCchhhhh-----CCccccCCHHHHhhccCCCCCCc
Confidence 22 33334455667789999999999976 44554 788888887765554 4444444
No 9
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=344.87 Aligned_cols=261 Identities=23% Similarity=0.330 Sum_probs=213.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|+..+.||.|+||+|.+++. .+|..||+|++++.... .+....|..+|+.+.||+++++++.|.+.+.+++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4799999999999999999987 56899999999866532 245778999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||. +|.|..++++ +++.....+|.+|+.||+|||++ +|++|||||+|||+|.+ |++||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~-G~iKitDFGFAK~v~~--- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQN-GHIKITDFGFAKRVSG--- 196 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccC-CcEEEEeccceEEecC---
Confidence 999 7789999965 88899999999999999999999 99999999999999999 8999999999965432
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.+.+.||||.|+|||++...+|+.++|+|||||++|||+.|.+||....+.+ . .+.+... ++ .
T Consensus 197 -----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~----i-Y~KI~~~----~v---~ 259 (355)
T KOG0616|consen 197 -----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ----I-YEKILEG----KV---K 259 (355)
T ss_pred -----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH----H-HHHHHhC----cc---c
Confidence 3568899999999999999999999999999999999999999998776521 1 1122111 11 1
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCC-----CCHHHHHHHhcCCchhhhhhhHHHHHHh-hccCCCC
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRR-----PTMKTLLKLFQEPDYWLKMKREKEELLN-ERRSNGP 545 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~R-----Ps~~evl~~L~~~~~w~~~~~~~~~~~~-~~~~~~~ 545 (549)
. +.-....+.+|++..++.|-.+| +...+|-. |+||+...+.+.+.. -+.+++|
T Consensus 260 f----P~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~-----H~wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 260 F----PSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKN-----HPWFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred C----CcccCHHHHHHHHHHHhhhhHhhhcCcCCCcccccc-----CcccccccHHHHhhccccCCCCC
Confidence 1 22223346677788899999888 33445554 799998887776655 3334444
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.6e-44 Score=346.18 Aligned_cols=268 Identities=23% Similarity=0.341 Sum_probs=212.7
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCH---HHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSE---EEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
+.|+...++|+|+||.||+|++ .+|+.||||.+..+..++ +-.++|+.+|++|+|+|+|.|+.+|.....+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 3577788899999999999988 459999999998665443 347899999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
||..++.+-|+. .+......+++|++.|+.|+|++ ++|||||||+|||++.+ |.+||||||+|+....
T Consensus 82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~-gvvKLCDFGFAR~L~~---- 153 (396)
T KOG0593|consen 82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQN-GVVKLCDFGFARTLSA---- 153 (396)
T ss_pred ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecC-CcEEeccchhhHhhcC----
Confidence 999887777765 56677888999999999999999 99999999999999999 7999999999977542
Q ss_pred ccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc---------
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG--------- 473 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~--------- 473 (549)
.+...+..+.|..|.|||.+.+ ..|+..+||||+||++.||++|.+.|.+..+- +.+....+.+..--
T Consensus 154 -pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi-DQLy~I~ktLG~L~prhq~iF~~ 231 (396)
T KOG0593|consen 154 -PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI-DQLYLIRKTLGNLIPRHQSIFSS 231 (396)
T ss_pred -CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH-HHHHHHHHHHcccCHHHHHHhcc
Confidence 3344556788999999999987 57999999999999999999999999887642 33443333332111
Q ss_pred --cccccc--CCcccccC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 474 --LCERLI--DPQLNEEY---NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 474 --~~~~~~--d~~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
.+..+. .+.-..+. .+....-+.++++.||..||.+|++-++++. |++|..-.+.+
T Consensus 232 N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~-----H~yFd~~~er~ 294 (396)
T KOG0593|consen 232 NPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH-----HPYFDGFIERE 294 (396)
T ss_pred CCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc-----ChHHHHHHHHH
Confidence 111111 11111111 1233457889999999999999999999997 77775544443
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.9e-46 Score=351.26 Aligned_cols=249 Identities=23% Similarity=0.375 Sum_probs=200.7
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEE-EE-EcCCeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIG-YC-HSKEMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~-~~-~~~~~~~lv~ 326 (549)
+|.++++||+|.||.||++.+ .+|..+|.|.+.....+ ..++..|+.+|++|+|||||++++ .+ +++..+.|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 578888999999999999976 78999999999755433 356889999999999999999998 34 4455599999
Q ss_pred ecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCC-CEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 327 NLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDP-PIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 327 e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~-~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
|+| .|+|.+.++. +++...++++.|++.||..+|+.-.+ -|+||||||.||+|+.+ |.+||+|||+++.+
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~-gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN-GVVKLGDFGLGRFL 178 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCC-CceeeccchhHhHh
Confidence 999 7999999854 67788999999999999999994322 38999999999999999 79999999999876
Q ss_pred ccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
.... ......+|||.||+||.+.+.+|+.|+||||+||++|||+.-++||.+.. +....+.+... .
T Consensus 179 ~s~~-----tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-----~~~L~~KI~qg-d--- 244 (375)
T KOG0591|consen 179 SSKT-----TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-----LLSLCKKIEQG-D--- 244 (375)
T ss_pred cchh-----HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-----HHHHHHHHHcC-C---
Confidence 5532 34457799999999999999999999999999999999999999998762 32333332221 1
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
-|.++ +.-....+.+++..|+..||+.||+.-.+++.+.
T Consensus 245 --~~~~p---~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 245 --YPPLP---DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred --CCCCc---HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 11111 2445567888899999999999998555544433
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-44 Score=368.80 Aligned_cols=259 Identities=24% Similarity=0.355 Sum_probs=215.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 324 (549)
.++|..++.||+|+|++||+|.. .+++.||||++.+.... .+.+.+|-++|.+| .||.|++||..|++...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 46899999999999999999976 57999999999765332 24577899999999 79999999999999999999
Q ss_pred EEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|+||+ +|+|.++|++ +.+.....++.+|+.||+|||++ |||||||||+|||||.| ++++|+|||.|+.+...
T Consensus 152 vLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~d-mhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKD-GHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCC-CcEEEeeccccccCChh
Confidence 99999 8999999976 56666778999999999999999 99999999999999999 69999999999887664
Q ss_pred ccc-----c---cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc
Q 008898 401 HQV-----S---ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS 472 (549)
Q Consensus 401 ~~~-----~---~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 472 (549)
... . .......++||..|.+||++..+..+..+|+|+||||||+|+.|.+||....+- ..+.+.+
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----liFqkI~--- 300 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----LIFQKIQ--- 300 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----HHHHHHH---
Confidence 332 1 112235699999999999999999999999999999999999999999865431 1111111
Q ss_pred cccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 473 GLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 473 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
-++-.+ ++..++.+.+|+++.|..||.+|+|..+|-+ |+||....+++
T Consensus 301 -----~l~y~f----p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~-----HpFF~~Vdw~n 348 (604)
T KOG0592|consen 301 -----ALDYEF----PEGFPEDARDLIKKLLVRDPSDRLTSQQIKA-----HPFFEGVDWEN 348 (604)
T ss_pred -----HhcccC----CCCCCHHHHHHHHHHHccCccccccHHHHhh-----CcccccCChhh
Confidence 012222 3333467788889999999999999999998 89998888887
No 13
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-43 Score=353.29 Aligned_cols=273 Identities=28% Similarity=0.412 Sum_probs=220.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+....||.|..+.||+|.. ..+..||||++..+.. +.+.+.+|+..|+.++||||++++..|..+..+|+||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 5799999999999999999976 6689999999976543 346789999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
| .|++.+.++. +.+..+..|..++++||.|||.+ |.||||||+.||||+++ |.+||+|||.+.....+.
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~d-G~VkLadFgvsa~l~~~G- 180 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSD-GTVKLADFGVSASLFDSG- 180 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCC-CcEEEcCceeeeeecccC-
Confidence 9 7899999965 66777888999999999999999 99999999999999999 899999999876655433
Q ss_pred cccCccc-cccccCCccccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 403 VSENVKP-VNVVGTFGYLAPEYMM--YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 403 ~~~~~~~-~~~~gt~~y~APE~~~--~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
...... .+++||++|||||+++ ..+|+.|+||||||+...||.+|..||....+.+..+.. + ++......
T Consensus 181 -~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t----L--qn~pp~~~ 253 (516)
T KOG0582|consen 181 -DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT----L--QNDPPTLL 253 (516)
T ss_pred -ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH----h--cCCCCCcc
Confidence 222222 6889999999999965 457999999999999999999999999887664432221 1 11111111
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHHHHhhcc
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEELLNERR 541 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~~~~~~~ 541 (549)
-..+...........+.+++..||..||.+|||++++++ |.||+.....+.+.+..+
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk-----h~FFk~~k~~~~~~~~~l 310 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK-----HAFFKKAKSKEYLVKKLL 310 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc-----cHHHhhccchhhcchhhh
Confidence 111122222334457888999999999999999999999 899998887776665443
No 14
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-44 Score=368.72 Aligned_cols=246 Identities=29% Similarity=0.437 Sum_probs=205.8
Q ss_pred CCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHH
Q 008898 256 PKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLK 334 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~ 334 (549)
..+.||+|-||.||.|.+.....+|+|.++......++|.+|+.+|++|+|+|||+|+++|..++.++|||||| .|+|.
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence 34569999999999999987779999999988878889999999999999999999999999988999999999 89999
Q ss_pred HHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccc
Q 008898 335 QYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKP 409 (549)
Q Consensus 335 ~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 409 (549)
+||+. +...+.+.++.|||+|++||+++ ++|||||...||||+++ ..+||+|||||+......+......
T Consensus 290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~-~~vKIsDFGLAr~~~d~~Y~~~~~~- 364 (468)
T KOG0197|consen 290 DYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDED-LVVKISDFGLARLIGDDEYTASEGG- 364 (468)
T ss_pred HHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccC-ceEEEcccccccccCCCceeecCCC-
Confidence 99975 66788899999999999999999 99999999999999999 6899999999985443332222111
Q ss_pred cccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCC
Q 008898 410 VNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYN 488 (549)
Q Consensus 410 ~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 488 (549)
.-...|.|||.+..+.++.|+|||||||+||||+| |+.|+...... +.+ +.++....-+-+
T Consensus 365 ---kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-ev~--------------~~le~GyRlp~P 426 (468)
T KOG0197|consen 365 ---KFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-EVL--------------ELLERGYRLPRP 426 (468)
T ss_pred ---CCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-HHH--------------HHHhccCcCCCC
Confidence 22457999999999999999999999999999999 77777655432 211 122233333445
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 489 REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 489 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
..++..+.+++..||+.+|++|||++.+...|++..
T Consensus 427 ~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 427 EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 667888999999999999999999999988776543
No 15
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.5e-43 Score=359.46 Aligned_cols=261 Identities=22% Similarity=0.310 Sum_probs=211.2
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
..++|+.+++||+|+||.||+|+. .+|..||+|+++++... .+.+..|-.||....+|+||+||-.|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 357899999999999999999976 56999999999887532 3567889999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+|||+ +|++..+|.. +++.....++.+++.|+..||+. |+|||||||+|+|||.. |++||+||||+.-....
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~-GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAK-GHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCC-CCEeeccccccchhhhh
Confidence 99999 7899888854 78888899999999999999999 99999999999999999 89999999998532211
Q ss_pred ccc------------------ccCc------------------------cccccccCCccccccccccCCCCchhhHHHH
Q 008898 401 HQV------------------SENV------------------------KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSY 438 (549)
Q Consensus 401 ~~~------------------~~~~------------------------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSl 438 (549)
... .+.. .....+|||.|||||++++.+|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 000 0000 1124689999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCcccchh--hHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC---H
Q 008898 439 GVVLLELITGKEAIQTNKANRE--SLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT---M 513 (549)
Q Consensus 439 Gvil~elltG~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs---~ 513 (549)
|||+||||.|.+||.+..+... .++.|...+.... .........++|.+|+. ||.+|.. +
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~--------------~~~~s~eA~DLI~rll~-d~~~RLG~~G~ 439 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE--------------EVDLSDEAKDLITRLLC-DPENRLGSKGA 439 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC--------------cCcccHHHHHHHHHHhc-CHHHhcCcccH
Confidence 9999999999999998876432 3444443332111 11122556778888888 9999975 6
Q ss_pred HHHHHHhcCCchhhhhhhHHH
Q 008898 514 KTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 514 ~evl~~L~~~~~w~~~~~~~~ 534 (549)
.||-+ |+||+...+..
T Consensus 440 ~EIK~-----HPfF~~v~W~~ 455 (550)
T KOG0605|consen 440 EEIKK-----HPFFKGVDWDH 455 (550)
T ss_pred HHHhc-----CCccccCCcch
Confidence 67766 89998887653
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-42 Score=357.12 Aligned_cols=253 Identities=25% Similarity=0.373 Sum_probs=207.1
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecC----C--cCHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCe
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCT----N--WSEEEVLREVELLSSIK-HENIVRIIGYCHSKEM 321 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~----~--~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~ 321 (549)
....|...+.||+|+||+|+.|.+ .+|..+|+|+++.. . ...+.+.+|+.+++.+. ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 356899999999999999999976 67899999987653 1 12345678999999999 9999999999999999
Q ss_pred EEEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 322 YAIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
+++||||+ +|+|.+++.. +.+.+...++.|++.|++|||++ ||+||||||+|||++.+.+++||+|||++...
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 99999999 6799999954 77788899999999999999999 99999999999999988458999999999664
Q ss_pred ccccccccCccccccccCCccccccccccCC-CC-chhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccc
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMYGK-VD-EKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLC 475 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~-~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 475 (549)
. .......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+...... ....+...
T Consensus 172 ~-----~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~-----l~~ki~~~--- 238 (370)
T KOG0583|consen 172 P-----GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN-----LYRKIRKG--- 238 (370)
T ss_pred C-----CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-----HHHHHhcC---
Confidence 2 2334556889999999999999987 85 78999999999999999999998743211 11111111
Q ss_pred ccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 476 ERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 476 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
.+ .++.... ...+..++.+|+..||..|+|+.+|++ |+||+..
T Consensus 239 -~~---~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~-----h~w~~~~ 281 (370)
T KOG0583|consen 239 -EF---KIPSYLL---SPEARSLIEKMLVPDPSTRITLLEILE-----HPWFQKE 281 (370)
T ss_pred -Cc---cCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhh-----ChhhccC
Confidence 11 1111111 455777889999999999999999997 9999973
No 17
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.4e-42 Score=326.20 Aligned_cols=262 Identities=24% Similarity=0.348 Sum_probs=210.2
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.+|...+.||+|.||.||+|++ .+|+.||||.++..+.. .....+|++.|+.++|+||+.|+++|-..+.+.+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 3577888999999999999976 77999999999876543 3568899999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+..+|+..++. +...+...++.++++||+|||.+ .|+||||||+|+|++++ |.+||+|||+|+........
T Consensus 82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~-g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSD-GQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCC-CcEEeecccchhccCCCCcc
Confidence 999999999965 67778889999999999999999 99999999999999999 79999999999876553322
Q ss_pred ccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc---------
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG--------- 473 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~--------- 473 (549)
....+-|..|.|||.+.|. .|+..+||||.|||+.||+-|.+-|.+..+ -+++......+.-..
T Consensus 158 -----~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-idQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 158 -----QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-IDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred -----cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-HHHHHHHHHHcCCCCcccCccccc
Confidence 2223678899999998875 599999999999999999999988877664 233333222221110
Q ss_pred -----ccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 474 -----LCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 474 -----~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
.+.....+.+.. +-..+.+...+++..|+..||.+|+|+++.++ |+||+.
T Consensus 232 lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~-----~~yf~~ 286 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALK-----HPYFKS 286 (318)
T ss_pred cccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhc-----chhhhc
Confidence 011111111111 22344556789999999999999999999999 888874
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-43 Score=360.10 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=217.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHH-HHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEE-VLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~-~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
..|.....||+|+.|.||.+.. .+++.||||++.......++ +++|+.+|+..+|+|||++++.|..++.+++||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 3566777899999999999966 67899999999877766554 689999999999999999999888889999999999
Q ss_pred -CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 -NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 -~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+|+|.+.+.. +++.++..|+.++++||+|||.+ +|||||||.+|||++.+ |.+||+|||+|.... ...
T Consensus 353 ~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~-g~vKltDFGFcaqi~-----~~~ 423 (550)
T KOG0578|consen 353 EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMD-GSVKLTDFGFCAQIS-----EEQ 423 (550)
T ss_pred CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccC-CcEEEeeeeeeeccc-----ccc
Confidence 7789999864 78888999999999999999999 99999999999999999 799999999985433 334
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
....+.+|||+|||||++....|++|+||||||++++||+-|.+||-...+-++. .++..+-...+-.
T Consensus 424 ~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl------yLIa~ng~P~lk~------ 491 (550)
T KOG0578|consen 424 SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNGTPKLKN------ 491 (550)
T ss_pred CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH------HHHhhcCCCCcCC------
Confidence 4667889999999999999999999999999999999999999999875543321 1121211112211
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHHHHhh
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEELLNE 539 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~~~~~ 539 (549)
.......+.+++.+||..|+.+||+++|||+ |+|+++.....++...
T Consensus 492 -~~klS~~~kdFL~~cL~~dv~~RasA~eLL~-----HpFl~~a~p~ssL~pL 538 (550)
T KOG0578|consen 492 -PEKLSPELKDFLDRCLVVDVEQRASAKELLE-----HPFLKMAKPESSLNPL 538 (550)
T ss_pred -ccccCHHHHHHHHHHhhcchhcCCCHHHHhc-----ChhhhhcCCHHHhHHH
Confidence 2334456777889999999999999999999 9999888877777653
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.4e-42 Score=355.58 Aligned_cols=242 Identities=28% Similarity=0.397 Sum_probs=206.0
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHH---HHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEE---EVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~---~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
++|...+.||+|+||+||||+. .+.+.||+|.+.+....++ .+.+|++|++.++||||+.++++|++...+++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4678888999999999999976 5689999999987665554 47789999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 328 LLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 328 ~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
|+-|+|..++.+ ++++....++.++..||.|||++ +|+|||+||.|||++.. +.+|+||||+|+.+.....
T Consensus 82 ~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~-~~~KlcdFg~Ar~m~~~t~-- 155 (808)
T KOG0597|consen 82 YAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKG-GTLKLCDFGLARAMSTNTS-- 155 (808)
T ss_pred hhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCC-CceeechhhhhhhcccCce--
Confidence 999999999965 88999999999999999999999 99999999999999999 7999999999987665332
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
....+.|||.|||||...++.|+..+|+||+|||+|||++|++||.... +....+.+..+ +.
T Consensus 156 ---vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-----i~~Lv~~I~~d--------~v-- 217 (808)
T KOG0597|consen 156 ---VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-----ITQLVKSILKD--------PV-- 217 (808)
T ss_pred ---eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-----HHHHHHHHhcC--------CC--
Confidence 2345679999999999999999999999999999999999999996543 33333333222 21
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.++......+..+++-.+.+||.+|.|-.+++.
T Consensus 218 -~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 -KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 122345556677778999999999999999987
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-42 Score=346.70 Aligned_cols=256 Identities=29% Similarity=0.436 Sum_probs=201.5
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCC--eEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKE--MYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~lv~e 327 (549)
.+|...+.||+|+||.||++.+. +|..+|||.+...+.. .+.+.+|+.+|++++|||||+++|...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35777889999999999999874 5999999998765322 355889999999999999999999854444 6999999
Q ss_pred cc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEec-CCCceEEeeecccccccccc
Q 008898 328 LL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSE-NFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 328 ~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~~kL~DFGla~~~~~~~ 401 (549)
|+ +|+|.+++.. +++.....+..||++||.|||++ |||||||||+|||++. + +.+||+|||++.....
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~-~~~KlaDFG~a~~~~~-- 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSN-GDVKLADFGLAKKLES-- 170 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCC-CeEEeccCcccccccc--
Confidence 99 8899999975 57888899999999999999999 9999999999999999 5 6899999999865543
Q ss_pred ccccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCc-ccchhhHHHHHHHhhccccccccc
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTN-KANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~-~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
..........+.||+.|||||++..+. ...++|||||||++.||+||.+||... ......+ .+.... .
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~-----~ig~~~-----~ 240 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALL-----LIGRED-----S 240 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHH-----HHhccC-----C
Confidence 111222334678999999999999643 345999999999999999999999864 2111111 111111 1
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
-|.+ +........+++..|+..||..|||+.++|+ |+|......
T Consensus 241 ~P~i----p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~-----hpf~~~~~~ 284 (313)
T KOG0198|consen 241 LPEI----PDSLSDEAKDFLRKCFKRDPEKRPTAEELLE-----HPFLKQNSI 284 (313)
T ss_pred CCCC----CcccCHHHHHHHHHHhhcCcccCcCHHHHhh-----Chhhhcccc
Confidence 2223 3334555667778999999999999999999 888876654
No 21
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-42 Score=360.15 Aligned_cols=251 Identities=25% Similarity=0.331 Sum_probs=207.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
.-|..++-||+|+.|.|-+|++ .+|+.+|||++.+.. .....+.+|+.||+.+.|||+++||++++++..+|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 3477888899999999999988 789999999997542 22356889999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|.|++++-. +.+.+..+++.||+.|+.|||.. +|+||||||+|+|||.. +.+||+|||+|....
T Consensus 92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~-~nIKIADFGMAsLe~---- 163 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVK-NNIKIADFGMASLEV---- 163 (786)
T ss_pred EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcc-cCEeeeccceeeccc----
Confidence 999 7899999943 78889999999999999999999 99999999999999998 469999999996533
Q ss_pred cccCccccccccCCccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKV-DEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.+....+-||.|.|.|||+++|.+| +.++||||.|||||.||+|+.||+++.-. .+..... .|.+
T Consensus 164 --~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir-----~LLlKV~-~G~f------ 229 (786)
T KOG0588|consen 164 --PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR-----VLLLKVQ-RGVF------ 229 (786)
T ss_pred --CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH-----HHHHHHH-cCcc------
Confidence 3334457799999999999999999 57999999999999999999999854321 1111111 1111
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
..+........+|+++|+..||.+|.|+.||++ |+|+...-..
T Consensus 230 ----~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k-----HP~l~g~~~~ 272 (786)
T KOG0588|consen 230 ----EMPSNISSEAQDLLRRMLDVDPSTRITTEEILK-----HPFLSGYTSL 272 (786)
T ss_pred ----cCCCcCCHHHHHHHHHHhccCccccccHHHHhh-----CchhhcCCCC
Confidence 112233345677889999999999999999999 9998766533
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-42 Score=350.98 Aligned_cols=263 Identities=24% Similarity=0.348 Sum_probs=207.8
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcC--CeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSK--EMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~l 324 (549)
.+.|+.++.||+|.||.||++++ .+|+.||+|.+..+... ..-..+||.||++|+||||++|.+...+. ..+|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 35688888999999999999976 77999999999876533 24567999999999999999999988765 68999
Q ss_pred EEeccCCCHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLLNGSLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~~gsL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|+|||..+|..++. +++..++..++.|+++||+|||.+ ||+|||||.+|||||.+ |.+||+|||||++....
T Consensus 196 VFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~-G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNN-GVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCC-CCEEeccccceeeccCC
Confidence 99999999999985 488899999999999999999999 99999999999999999 89999999999876543
Q ss_pred cccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc--c--
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL--C-- 475 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~-- 475 (549)
.. ...+..+-|..|.|||.++|. .|+.++|+||.||||.||++|++.|++..+ -+++....+....... .
T Consensus 272 ~~----~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE-veQl~kIfklcGSP~e~~W~~ 346 (560)
T KOG0600|consen 272 GS----APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE-VEQLHKIFKLCGSPTEDYWPV 346 (560)
T ss_pred CC----cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH-HHHHHHHHHHhCCCChhcccc
Confidence 22 224456779999999999976 599999999999999999999999998765 2233332222221110 0
Q ss_pred ccccCCcc---cccCCH-------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 476 ERLIDPQL---NEEYNR-------EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 476 ~~~~d~~l---~~~~~~-------~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..+..... ...|.. ......++|+..+|..||.+|.|+.+.|+ +.||
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~-----seyF 403 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ-----SEYF 403 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc-----Cccc
Confidence 01110000 011111 22356778889999999999999999998 5666
No 23
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.9e-41 Score=339.26 Aligned_cols=265 Identities=24% Similarity=0.299 Sum_probs=206.5
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
|+..+.||+|+||.||++.. .+|+.+|+|.+..... ....+.+|+.+++.++|+||+++++++.+++.++++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999976 6799999999875432 123567899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+|||++++ +.++|+|||++......
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~-- 155 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDR-GHIRISDLGLAVQIPEG-- 155 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCC-CCEEEeeCCCcEEcCCC--
Confidence 9 6789887742 56778888999999999999999 99999999999999988 68999999998654321
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ........ ..
T Consensus 156 ----~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~-~~--------- 220 (285)
T cd05631 156 ----ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDRRVK-ED--------- 220 (285)
T ss_pred ----CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHHHhh-cc---------
Confidence 1123457999999999999999999999999999999999999999865432111 11111110 00
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcCCchhhhhhhHH-HHHHhhccCCCC
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPT-----MKTLLKLFQEPDYWLKMKREK-EELLNERRSNGP 545 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~L~~~~~w~~~~~~~-~~~~~~~~~~~~ 545 (549)
...++......+.+++..||..||.+||+ +.++++ |+||..-... .+....++++.|
T Consensus 221 -~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~-----h~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05631 221 -QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ-----HPIFKNINFKRLEANMLEPPFCP 283 (285)
T ss_pred -cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc-----CHhhcCCCHHHHHhCcCCcCCCC
Confidence 01122233456778899999999999997 889998 8999876533 333334455554
No 24
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=349.92 Aligned_cols=267 Identities=22% Similarity=0.324 Sum_probs=211.7
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHH--HHHHHHHHhcCC-CCCeeeEEEEEEcCC-eEEE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEE--VLREVELLSSIK-HENIVRIIGYCHSKE-MYAI 324 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~--~~~E~~il~~l~-h~nIv~l~~~~~~~~-~~~l 324 (549)
+.++|...+.||.|+||.||+|.. .+|..||||.++..-...++ -+||+..|++|+ ||||++|.+++.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 346788888999999999999976 67999999999876555454 468999999999 999999999998877 9999
Q ss_pred EEeccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|||||..+|++.++. +++..+..|+.||++||.|+|.+ |+.|||+||+|||+..++ .+||+|||+|+....
T Consensus 88 VfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~-~iKiaDFGLARev~S- 162 (538)
T KOG0661|consen 88 VFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGND-VIKIADFGLAREVRS- 162 (538)
T ss_pred eHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccc-eeEeccccccccccc-
Confidence 999999999999965 88899999999999999999999 999999999999999663 799999999976443
Q ss_pred cccccCccccccccCCccccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc-----
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMM-YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL----- 474 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~----- 474 (549)
....+..+.|..|.|||++. .+-|+.++|+||+|||++|+.+-++.|.+..+-+. +......+...+.
T Consensus 163 -----kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq-i~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 163 -----KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ-IYKICEVLGTPDKDSWPE 236 (538)
T ss_pred -----CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH-HHHHHHHhCCCccccchh
Confidence 33455678899999999986 55689999999999999999999999988765332 3222222221110
Q ss_pred ---cc---cccCCcc----cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 475 ---CE---RLIDPQL----NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 475 ---~~---~~~d~~l----~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
+. .+.-|.. ....-+.+.....+++..|++.||.+|||+.++++ |++|.....
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~-----~pffq~~~~ 299 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ-----HPFFQVGRA 299 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc-----Ccccccccc
Confidence 00 0111111 01111235667888899999999999999999999 777765543
No 25
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=7.4e-41 Score=340.80 Aligned_cols=267 Identities=23% Similarity=0.350 Sum_probs=204.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.++|...+.||+|+||.||+|.. .+++.+|+|+++.... ....+.+|+.+++.++||||+++++++.+++.++++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 46799999999999999999987 4689999999975432 23457789999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.++|.+++.. +....+..++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++......
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~--- 156 (303)
T cd07869 84 YVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDT-GELKLADFGLARAKSVP--- 156 (303)
T ss_pred CCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC-CCEEECCCCcceeccCC---
Confidence 999999888854 56778888999999999999999 99999999999999988 68999999998543221
Q ss_pred ccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc--cc---c
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL--CE---R 477 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~---~ 477 (549)
........||+.|+|||++.+. .++.++|||||||++|||++|..||.......+.+............ .. .
T Consensus 157 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 157 --SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred --CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 1122345689999999998754 58899999999999999999999998755433333222211110000 00 0
Q ss_pred --ccCCcccccCC-----H-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 478 --LIDPQLNEEYN-----R-----EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 478 --~~d~~l~~~~~-----~-----~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
..++.....+. . .....+.+++..||..||.+|||+.++++ |+||+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~-----h~~f~~~~ 295 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS-----HEYFSDLP 295 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc-----CcccccCC
Confidence 00000000000 0 01245678999999999999999999998 99997643
No 26
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=347.97 Aligned_cols=251 Identities=28% Similarity=0.367 Sum_probs=211.5
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
..|....+||+|.||.||+|.. .+++.||+|++..+.. ..+++.+|+.+|.+++++||.++|+.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3577778899999999999976 6799999999987653 346789999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+ +|++.+.++. +.+....-++.++..||.|||.. +.||||||+.|||+..+ |.+||+|||.+.....
T Consensus 93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~-g~vkl~DfgVa~ql~~----- 163 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSES-GDVKLADFGVAGQLTN----- 163 (467)
T ss_pred hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEecc-CcEEEEecceeeeeec-----
Confidence 9 7789888865 35666677889999999999999 99999999999999999 7999999999855433
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
...+..+++|||.|||||++....|+.|+||||||++++||.+|.+|+...++.. +..++-...+
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr---------------vlflIpk~~P 228 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR---------------VLFLIPKSAP 228 (467)
T ss_pred hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce---------------EEEeccCCCC
Confidence 2334468999999999999998899999999999999999999999998877632 2222333333
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
..+...+...+.+++..||.+||+.||++.++++ |++++...
T Consensus 229 P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK-----h~FIk~a~ 270 (467)
T KOG0201|consen 229 PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK-----HKFIKRAK 270 (467)
T ss_pred CccccccCHHHHHHHHHHhhcCcccCcCHHHHhh-----hHHHHhcC
Confidence 3344455566788889999999999999999999 77877654
No 27
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.9e-41 Score=349.14 Aligned_cols=251 Identities=24% Similarity=0.407 Sum_probs=194.4
Q ss_pred hcCCCCCceEcccCceEEEEEEe------cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcC-C
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH------VDGQVAAVKVLKCTNW--SEEEVLREVELLSSI-KHENIVRIIGYCHSK-E 320 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~-~ 320 (549)
.++|.+.+.||+|+||.||+|.+ .+++.||||+++.... ....+.+|+.+++.+ +||||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46799999999999999999964 2356899999975432 234688999999999 899999999988754 4
Q ss_pred eEEEEEecc-CCCHHHHHHH------------------------------------------------------------
Q 008898 321 MYAIVYNLL-NGSLKQYLKQ------------------------------------------------------------ 339 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~------------------------------------------------------------ 339 (549)
.++++|||+ +|+|.+++..
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 688999999 7899998853
Q ss_pred -----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcccccccc
Q 008898 340 -----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVG 414 (549)
Q Consensus 340 -----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~g 414 (549)
+.+.....++.||++||.|||+. +|+||||||+|||++.+ +.+||+|||++........ ........+
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~-~~~kl~DfG~a~~~~~~~~---~~~~~~~~~ 238 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPD---YVRKGSARL 238 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCC-CcEEEeecccccccccCcc---hhcccCCCC
Confidence 34456678899999999999999 99999999999999988 6899999999865432111 111123356
Q ss_pred CCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHH
Q 008898 415 TFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIE 493 (549)
Q Consensus 415 t~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 493 (549)
++.|+|||++.+..++.++|||||||++|||++ |..||........ + ...+. .+. .... +.....
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~---~~~~~-~~~-----~~~~----~~~~~~ 304 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-F---CQRLK-DGT-----RMRA----PENATP 304 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-H---HHHHh-cCC-----CCCC----CCCCCH
Confidence 788999999999999999999999999999997 9999976543221 1 11111 111 0111 122345
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 494 IVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 494 ~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+.+++..||..||.+|||+.+|++.|+.
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 67889999999999999999999998864
No 28
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-42 Score=319.32 Aligned_cols=247 Identities=24% Similarity=0.371 Sum_probs=208.5
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
-++|++++.||+|-||.||.|+. .++..+|+|++.++.. ...++.+|++|.+.|+||||+++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 35799999999999999999976 5688999999976642 346788999999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHH-----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 326 YNLL-NGSLKQYLK-----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 326 ~e~~-~gsL~~~l~-----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
+||. .|+|...|+ ++++.....+..|+|.||.|+|.+ +||||||||+|+|++.+ +.+||+|||.+...+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~-~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSA-GELKIADFGWSVHAP- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCC-CCeeccCCCceeecC-
Confidence 9999 899999996 377778889999999999999999 99999999999999999 799999999986532
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
..+..+.|||..|++||+..+..++..+|+|++|++.||++.|.+||..... .+......+ .++.
T Consensus 176 ------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-~etYkrI~k--------~~~~ 240 (281)
T KOG0580|consen 176 ------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-SETYKRIRK--------VDLK 240 (281)
T ss_pred ------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-HHHHHHHHH--------cccc
Confidence 3455688999999999999999999999999999999999999999987662 222211111 1122
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
+| ........++|..|+..+|.+|.+..++++ |+|+..
T Consensus 241 ~p-------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~-----hpwI~a 278 (281)
T KOG0580|consen 241 FP-------STISGGAADLISRLLVKNPIERLALTEVMD-----HPWIVA 278 (281)
T ss_pred CC-------cccChhHHHHHHHHhccCccccccHHHHhh-----hHHHHh
Confidence 22 223345777889999999999999999999 899753
No 29
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=351.98 Aligned_cols=255 Identities=27% Similarity=0.401 Sum_probs=203.7
Q ss_pred hhhcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCH---HHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 249 HLTHNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSE---EEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 249 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
...+++.....||+|.||+||+|.+. ..||||+++.+.... +.|..|+..+++-+|.||+-++|+|..... .||
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred cCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 34456677888999999999999874 348999998776554 457899999999999999999999988776 899
Q ss_pred EeccCC-CHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 326 YNLLNG-SLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 326 ~e~~~g-sL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
..+|.| +|+.++. ++.....+.||.||++|+.|||.+ +|||||||..|||+.++ +.+||+|||++......
T Consensus 466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~-~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHED-LKVKIGDFGLATVKTRW 541 (678)
T ss_pred ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccC-CcEEEecccceeeeeee
Confidence 999966 6999983 478888899999999999999999 99999999999999998 68999999999654432
Q ss_pred cccccCccccccccCCcccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMY---GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
..........|...|||||+++. .+|++.+||||||+++|||+||..||.....++. ++.-|.-.-
T Consensus 542 ---~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI--------ifmVGrG~l 610 (678)
T KOG0193|consen 542 ---SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI--------IFMVGRGYL 610 (678)
T ss_pred ---ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe--------EEEeccccc
Confidence 33334445678889999999874 4689999999999999999999999983332221 111111111
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
..|. .....++++.|.+|+..||..++++||++.+|+..|+...
T Consensus 611 ~pd~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 611 MPDL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred Cccc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 1111 2234567788899999999999999999999999666544
No 30
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.1e-41 Score=346.22 Aligned_cols=249 Identities=20% Similarity=0.298 Sum_probs=200.3
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
++||+|+||.||++.+ .+|+.+|+|+++.... ....+.+|+.+++.++||||+++++++..++.++++|||+ +|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999977 5789999999975421 2245678999999999999999999999999999999999 67
Q ss_pred CHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcc
Q 008898 332 SLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVK 408 (549)
Q Consensus 332 sL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~ 408 (549)
+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++..... ....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~-~~~kl~DfG~a~~~~~-----~~~~ 151 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIS-----DGAT 151 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCC-CCEEEeeCCCCccccc-----CCCc
Confidence 89888854 67788888999999999999999 99999999999999998 6899999999854221 1222
Q ss_pred ccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCC
Q 008898 409 PVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYN 488 (549)
Q Consensus 409 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 488 (549)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... +. ...... +..++
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~---~~~~~~-------~~~~p---- 215 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LF---ELILME-------EIRFP---- 215 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH--HH---HHHHcC-------CCCCC----
Confidence 335679999999999999999999999999999999999999997643221 11 111100 11112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHHHH
Q 008898 489 REEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKEEL 536 (549)
Q Consensus 489 ~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~~~ 536 (549)
......+.+++..||..||.+|| ++.++++ |+||.........
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~-----h~~f~~~~~~~~~ 263 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME-----HRFFASINWQDVV 263 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc-----CCCcCCCCHHHHH
Confidence 22344577888999999999999 8999998 8999876655444
No 31
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=336.60 Aligned_cols=241 Identities=25% Similarity=0.402 Sum_probs=202.3
Q ss_pred hcCCCCCceEcccCceEEEEEE-ecCCcEEEEEEeecCCcCH----HHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTN-HVDGQVAAVKVLKCTNWSE----EEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~~AvK~l~~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
..+|++.+.||+|.||+|-++. +..|+.||||.++++.... -.+.+|++||+.|+||||+.+|.+|+..+...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 4567888889999999999995 4789999999998765433 3477899999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
|||. +|.|++|+.. +++.+...++.||..|+.|+|.+ +++|||||.+|||+|.+ +++||+|||++.++.
T Consensus 132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N-~NiKIADFGLSNly~--- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQN-NNIKIADFGLSNLYA--- 204 (668)
T ss_pred EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCC-CCeeeeccchhhhhc---
Confidence 9999 8899999954 88888999999999999999999 99999999999999999 699999999986543
Q ss_pred ccccCccccccccCCccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKV-DEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
......++||+|-|.+||++.+.+| ++.+|-|||||+||-|+.|..||++.+... + +..+- ...+..
T Consensus 205 ---~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~--l---vrQIs----~GaYrE 272 (668)
T KOG0611|consen 205 ---DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR--L---VRQIS----RGAYRE 272 (668)
T ss_pred ---cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH--H---HHHhh----cccccC
Confidence 3445568999999999999999998 688999999999999999999998765321 1 11111 111222
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
|.. +....-+|++||..||++|.|+.+|..
T Consensus 273 P~~--------PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 273 PET--------PSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred CCC--------CchHHHHHHHHHhcCcccchhHHHHhh
Confidence 222 223455789999999999999999998
No 32
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.3e-40 Score=336.75 Aligned_cols=261 Identities=24% Similarity=0.365 Sum_probs=200.4
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|...+.||+|+||.||+|.. .+++.+|+|+++.... ....+.+|+.+++.++||||+++++++.+++.++++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 4689999999999999999977 5689999999975432 234678999999999999999999999999999999999
Q ss_pred cCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+.|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++......
T Consensus 85 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~-~~~kl~DfG~~~~~~~~---- 156 (288)
T cd07871 85 LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEK-GELKLADFGLARAKSVP---- 156 (288)
T ss_pred CCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCC-CCEEECcCcceeeccCC----
Confidence 99999998854 56777888999999999999999 99999999999999998 68999999998653321
Q ss_pred cCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc-----------c
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS-----------S 472 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~-----------~ 472 (549)
........||+.|+|||++.+ ..++.++|||||||++|||++|++||........ +......... .
T Consensus 157 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 157 -TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred -CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccccc
Confidence 112234568999999998875 4689999999999999999999999976543222 1111111100 0
Q ss_pred cccccccCCccccc----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 473 GLCERLIDPQLNEE----YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 473 ~~~~~~~d~~l~~~----~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
........+..... ..........++++.||..||.+|||++|+++ |+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~-----hp~f 288 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR-----HSYF 288 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc-----CCCC
Confidence 00001111110000 00112345678999999999999999999998 8886
No 33
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.1e-41 Score=340.93 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=202.7
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...+.||+|+||.||++.. .+|+.+|+|++..... ..+.+.+|+.+++.++||||+++++++.+++.++++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 3688899999999999999987 4689999999975431 2345788999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~-~~~kl~Dfg~~~~~~~--- 153 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKE-GHIKLTDFGFAKKLRD--- 153 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCC-CCEEEEecCcchhccC---
Confidence 999 6799999854 67778888999999999999999 99999999999999988 6899999999865322
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||....... . ...+... . ..
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--~---~~~i~~~-~------~~ 216 (291)
T cd05612 154 -----RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--I---YEKILAG-K------LE 216 (291)
T ss_pred -----CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--H---HHHHHhC-C------cC
Confidence 1224579999999999999899999999999999999999999997654321 1 1111111 0 11
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcCCchhhhhhhHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPT-----MKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~L~~~~~w~~~~~~~ 533 (549)
+.. .....+.++++.||..||.+||+ +.++++ |+|+......
T Consensus 217 ~~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~-----h~~~~~~~~~ 263 (291)
T cd05612 217 FPR----HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN-----HRWFKSVDWD 263 (291)
T ss_pred CCc----cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc-----CccccCCCHH
Confidence 111 22345778999999999999995 999997 8999765544
No 34
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=342.46 Aligned_cols=258 Identities=26% Similarity=0.356 Sum_probs=205.7
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---------------HHHHHHHHHHHhcCCCCCeeeEE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---------------EEEVLREVELLSSIKHENIVRII 313 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---------------~~~~~~E~~il~~l~h~nIv~l~ 313 (549)
..++|.+.+.||+|.||+|-+|.. .+++.||||++.+.... .+.+.+|+.||++|+|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 346899999999999999999977 67999999999654321 25688999999999999999999
Q ss_pred EEEEc--CCeEEEEEecc-CCCHHHHH--HH-hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceE
Q 008898 314 GYCHS--KEMYAIVYNLL-NGSLKQYL--KQ-LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQ 387 (549)
Q Consensus 314 ~~~~~--~~~~~lv~e~~-~gsL~~~l--~~-~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~k 387 (549)
.+..+ .+.+|+|+||| .|.+...- +. +.+.+.+.++.++..||+|||.+ |||||||||+|+||+++ |++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~-g~VK 250 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD-GTVK 250 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC-CcEE
Confidence 99965 46899999999 55543322 22 77889999999999999999999 99999999999999999 8999
Q ss_pred EeeeccccccccccccccCccccccccCCccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHH
Q 008898 388 LSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGK----VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLV 463 (549)
Q Consensus 388 L~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~ 463 (549)
|+|||.+..+...............+|||.|+|||...++. .+.+.||||+||+||.|+.|+.||-....-
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~----- 325 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL----- 325 (576)
T ss_pred eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH-----
Confidence 99999997765442222233334578999999999988743 257899999999999999999999765421
Q ss_pred HHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 464 LWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 464 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
.. ...++...+.-+-.++..+.+.++|.++|.+||+.|.++.+|.. |+|....
T Consensus 326 ~l---------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~-----Hpwvt~~ 378 (576)
T KOG0585|consen 326 EL---------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL-----HPWVTRD 378 (576)
T ss_pred HH---------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhee-----cceeccC
Confidence 11 12223333333333466788999999999999999999999987 8897544
No 35
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.2e-40 Score=359.74 Aligned_cols=272 Identities=19% Similarity=0.247 Sum_probs=200.5
Q ss_pred HHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCC------CCeeeEEEEEEc
Q 008898 246 ELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKH------ENIVRIIGYCHS 318 (549)
Q Consensus 246 el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h------~nIv~l~~~~~~ 318 (549)
++...+++|.+.++||+|+||+||++.+ .+++.||||+++.......+...|+.+++.+.| .+++++++++..
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3334567899999999999999999977 568899999997543333455667777776654 458899998865
Q ss_pred C-CeEEEEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCC---------
Q 008898 319 K-EMYAIVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFH--------- 384 (549)
Q Consensus 319 ~-~~~~lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~--------- 384 (549)
+ ..+++||++++++|.+++.+ +.+.....++.||+.||.|||+ . +||||||||+|||++.+..
T Consensus 203 ~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccccccc
Confidence 4 57899999999999998854 6788889999999999999997 6 9999999999999986521
Q ss_pred ------ceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc
Q 008898 385 ------HPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN 458 (549)
Q Consensus 385 ------~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~ 458 (549)
.+||+|||.+.... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||......
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~--------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER--------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred cCCCCceEEECCCCccccCc--------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 48999999874321 1223568999999999999999999999999999999999999999765432
Q ss_pred hhhHHHHHHHhhc--------------------ccccccccCCccc------c-cCCHHHHHHHHHHHHHhcccCCCCCC
Q 008898 459 RESLVLWARSLLS--------------------SGLCERLIDPQLN------E-EYNREEIEIVMCAARLCLLHSSSRRP 511 (549)
Q Consensus 459 ~~~l~~~~~~~~~--------------------~~~~~~~~d~~l~------~-~~~~~~~~~l~~li~~Cl~~dP~~RP 511 (549)
+.+......+.. .+......++... . .........+.+++..||..||.+||
T Consensus 352 -~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 352 -EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred -HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 111111111000 0000000000000 0 00001124577999999999999999
Q ss_pred CHHHHHHHhcCCchhhhhhhHHH
Q 008898 512 TMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 512 s~~evl~~L~~~~~w~~~~~~~~ 534 (549)
|++|+++ |+||.......
T Consensus 431 ta~e~L~-----Hp~~~~~~~~~ 448 (467)
T PTZ00284 431 NARQMTT-----HPYVLKYYPEC 448 (467)
T ss_pred CHHHHhc-----CccccccCCcc
Confidence 9999998 99998765543
No 36
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.3e-40 Score=332.78 Aligned_cols=262 Identities=23% Similarity=0.319 Sum_probs=200.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
++|.+.+.||+|+||.||++.+ .+++.+|+|+++.... ..+.+.+|+.+++.++||||+++++++..++.++++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 3688999999999999999987 4688999999975432 23567889999999999999999999999999999999
Q ss_pred ccCCCHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.+++.+.+. .+++.....++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~-- 154 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHN-DVLKLCDFGFARNLSEGS-- 154 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCC-CcEEEeeccCcccccccc--
Confidence 99766555553 267778889999999999999999 99999999999999988 689999999986643211
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHH-----------hhcc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARS-----------LLSS 472 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~-----------~~~~ 472 (549)
........||+.|+|||++.+..++.++|||||||++|||++|++||........ +...... ....
T Consensus 155 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07848 155 --NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYSN 231 (287)
T ss_pred --cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhcc
Confidence 1122345789999999999998999999999999999999999999986543221 1111100 0000
Q ss_pred cccccccCCcccc------cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 473 GLCERLIDPQLNE------EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 473 ~~~~~~~d~~l~~------~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
........+.... .+.......+.++++.||+.||.+|||++++++ |+||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~-----hp~f 287 (287)
T cd07848 232 PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN-----HPAF 287 (287)
T ss_pred chhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc-----CCCC
Confidence 0000110111100 011123456889999999999999999999998 8886
No 37
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.6e-41 Score=345.60 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=203.0
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|.+.+.||+|+||.||+|.+ .+|+.+|+|+++.... ..+.+.+|+.+++.++||||+++++++.+++.++++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 5788999999999999999987 4689999999975421 2345789999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~-~~~kl~Dfg~~~~~~~--- 170 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNK-GHVKVTDFGFAKKVPD--- 170 (329)
T ss_pred cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCC-CCEEEeeccCceEcCC---
Confidence 998 6799999864 56777788999999999999999 99999999999999998 6899999999865432
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.. +. ..
T Consensus 171 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~~~~i~~-~~------~~ 233 (329)
T PTZ00263 171 -----RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR-----IYEKILA-GR------LK 233 (329)
T ss_pred -----CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH-----HHHHHhc-CC------cC
Confidence 1224579999999999999999999999999999999999999997654321 1111111 11 01
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcCCchhhhhhhHHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPT-----MKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~L~~~~~w~~~~~~~~ 534 (549)
++..+ ...+.+++..||..||.+||+ +.+++. |+||+......
T Consensus 234 ~p~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~-----hp~f~~~~~~~ 281 (329)
T PTZ00263 234 FPNWF----DGRARDLVKGLLQTDHTKRLGTLKGGVADVKN-----HPYFHGANWDK 281 (329)
T ss_pred CCCCC----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc-----CCccCCCCHHH
Confidence 11122 245678899999999999997 799998 89998755443
No 38
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.3e-40 Score=334.46 Aligned_cols=259 Identities=22% Similarity=0.377 Sum_probs=196.5
Q ss_pred CCCCCceEcccCceEEEEEEe-c-CCcEEEEEEeecCCcC---HHHHHHHHHHHhcC---CCCCeeeEEEEEE-----cC
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-V-DGQVAAVKVLKCTNWS---EEEVLREVELLSSI---KHENIVRIIGYCH-----SK 319 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~-~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l---~h~nIv~l~~~~~-----~~ 319 (549)
+|...+.||+|+||.||++.+ . +|+.+|+|.++..... ...+.+|+.+++.+ +||||++++++|. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 688899999999999999976 3 4688999998754322 24566788777765 6999999999885 34
Q ss_pred CeEEEEEeccCCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 320 EMYAIVYNLLNGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 320 ~~~~lv~e~~~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
..++++||++.|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~-~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSS-GQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCC-CCEEEccccce
Confidence 56899999999999999854 56778899999999999999999 99999999999999998 68999999998
Q ss_pred cccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc-
Q 008898 395 MVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG- 473 (549)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~- 473 (549)
...... .......||+.|+|||.+.+..++.++|||||||++|||++|++||....... .+...........
T Consensus 158 ~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~ 230 (290)
T cd07862 158 RIYSFQ------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGE 230 (290)
T ss_pred EeccCC------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCCh
Confidence 654321 22234578999999999998899999999999999999999999998764322 1111111110000
Q ss_pred -cc-------ccccCCcc---cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 474 -LC-------ERLIDPQL---NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 474 -~~-------~~~~d~~l---~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.. .....+.. ......+....+.+++.+||+.||++|||+.++++ |+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~-----hp~f 290 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS-----HPYF 290 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc-----CCCC
Confidence 00 00000000 00111223456778999999999999999999998 8886
No 39
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.8e-40 Score=342.74 Aligned_cols=256 Identities=22% Similarity=0.296 Sum_probs=204.4
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|.+.+.||+|+||.||+|.+. +++.+|+|+++.... ....+..|+.++..++||||+++++++..++.++++|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999874 589999999975421 2345788999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~-~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDAS-GHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCC-CCEEEEeCcCCccccc---
Confidence 999 7799999864 67778888999999999999999 99999999999999998 6899999999864332
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
......||+.|+|||++.+..++.++|||||||++|||++|..||........ ...... .... +..+.
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~i~~---~~~~---~~~~~ 221 (333)
T cd05600 154 -----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-WENLKY---WKET---LQRPV 221 (333)
T ss_pred -----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-HHHHHh---cccc---ccCCC
Confidence 22356799999999999999999999999999999999999999976543221 111000 0000 00111
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
. ..........+.+++..||..+|.+||++.++++ |+||.....
T Consensus 222 ~-~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~-----h~~~~~~~~ 265 (333)
T cd05600 222 Y-DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN-----HPFFKEVDW 265 (333)
T ss_pred C-CccccccCHHHHHHHHHHhhChhhhcCCHHHHHh-----CcccCCCCH
Confidence 1 0001123456778889999999999999999999 899886543
No 40
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.8e-40 Score=341.20 Aligned_cols=267 Identities=24% Similarity=0.330 Sum_probs=199.6
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC-----CeEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSK-----EMYA 323 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~ 323 (549)
+|...+.||+|+||.||+|.. .+|+.||||.++... .....+.+|+.+++.++||||+++++++... ..++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 477889999999999999986 568999999987432 2234578999999999999999999988533 3589
Q ss_pred EEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 324 IVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 324 lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
++|||++++|.+++.. +++.....++.||++||.|||+. +|+||||||+|||++.+ +.+||+|||++......
T Consensus 81 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANAD-CKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCC-CcEEEccCccccccccc
Confidence 9999999999998854 77888899999999999999999 99999999999999998 68999999998653221
Q ss_pred cccccCccccccccCCcccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHh---------
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMY--GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSL--------- 469 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~--------- 469 (549)
.. .........||+.|+|||++.+ ..++.++|||||||++|||++|++||....... .+.......
T Consensus 157 ~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 157 TP--TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH-QLDLITDLLGTPSPETIS 233 (338)
T ss_pred cC--ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCCHHHHH
Confidence 11 1112234579999999999875 678999999999999999999999997654311 110000000
Q ss_pred --hccc---ccccccCCcccccCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 470 --LSSG---LCERLIDPQLNEEYN---REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 470 --~~~~---~~~~~~d~~l~~~~~---~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
.... ....+ .+.....+. ......+.+++..||..||.+|||++++++ |+||+....
T Consensus 234 ~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~-----hp~f~~~~~ 298 (338)
T cd07859 234 RVRNEKARRYLSSM-RKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA-----DPYFKGLAK 298 (338)
T ss_pred HhhhhhHHHHHHhh-cccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc-----CchhhhcCc
Confidence 0000 00000 000000000 112345678999999999999999999998 899976544
No 41
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.5e-40 Score=354.37 Aligned_cols=264 Identities=22% Similarity=0.301 Sum_probs=198.7
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC--------Ce
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSK--------EM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--------~~ 321 (549)
..+|...+.||+|+||.||+|.+ .+++.+|||.+.... ....+|+.+|+.++||||+++++++... ..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 45799999999999999999987 568999999886443 2345799999999999999998876321 25
Q ss_pred EEEEEeccCCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 322 YAIVYNLLNGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
++++|||+.++|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+.+.+||+|||+|
T Consensus 142 l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 142 LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred EEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 778999999998887742 56677888999999999999999 99999999999999977457999999999
Q ss_pred cccccccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc
Q 008898 395 MVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG 473 (549)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~ 473 (549)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|.+||....... .+......+....
T Consensus 219 ~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~ 291 (440)
T PTZ00036 219 KNLLAG------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPT 291 (440)
T ss_pred hhccCC------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCC
Confidence 654321 122345789999999998764 68999999999999999999999997654322 2222111110000
Q ss_pred ---------ccccc-----cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 474 ---------LCERL-----IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 474 ---------~~~~~-----~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
....+ ....+...++...+..+.+++..||..||.+|||+.++++ |+||.....
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~-----hp~f~~~~~ 359 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA-----DPFFDDLRD 359 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC-----ChhHHhhhc
Confidence 00000 0001111112223456888999999999999999999999 899976544
No 42
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.6e-40 Score=345.87 Aligned_cols=260 Identities=21% Similarity=0.268 Sum_probs=200.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEeccC
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLLN 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 330 (549)
.+|...+.||+|+||.||++.. .+++.+|+|... ...+.+|+.+++.++||||+++++++..+...++++|++.
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~ 166 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK 166 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC
Confidence 5799999999999999999976 568999999754 2357789999999999999999999999999999999999
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
++|..++.. +++...+.++.||+.||.|||++ +|+||||||+|||++.+ +.++|+|||+|...... ...
T Consensus 167 ~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~-~~vkL~DFG~a~~~~~~----~~~ 238 (391)
T PHA03212 167 TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHP-GDVCLGDFGAACFPVDI----NAN 238 (391)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCC-CCEEEEeCCcccccccc----ccc
Confidence 999988854 67788899999999999999999 99999999999999988 68999999998543221 111
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCccc------chhhHHHHHHHhhcc---------
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKA------NRESLVLWARSLLSS--------- 472 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~------~~~~l~~~~~~~~~~--------- 472 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+..........
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 22356799999999999999999999999999999999999988754321 011111111100000
Q ss_pred ccccc---------ccCCcccccC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 473 GLCER---------LIDPQLNEEY--NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 473 ~~~~~---------~~d~~l~~~~--~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
..... ...+...... ....+..+.+++.+||..||.+|||++|+++ |+||..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~-----hp~f~~ 381 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD-----FAAFQD 381 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc-----Chhhcc
Confidence 00000 0000000000 1123456888999999999999999999998 899965
No 43
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.8e-40 Score=333.30 Aligned_cols=256 Identities=22% Similarity=0.354 Sum_probs=195.5
Q ss_pred cCCCCCceEcccCceEEEEEEecC-----------------CcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVD-----------------GQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRI 312 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~-----------------g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l 312 (549)
++|.+.+.||+|+||.||++...+ +..+|+|++..... ...++.+|+.++..++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578899999999999999996432 34799999876432 23468899999999999999999
Q ss_pred EEEEEcCCeEEEEEecc-CCCHHHHHHH----------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEE
Q 008898 313 IGYCHSKEMYAIVYNLL-NGSLKQYLKQ----------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIH 369 (549)
Q Consensus 313 ~~~~~~~~~~~lv~e~~-~gsL~~~l~~----------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiH 369 (549)
++++.+.+..+++|||+ +|+|.+++.. +++...+.++.||+.||.|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 99999999999999999 7799998853 34566788999999999999999 9999
Q ss_pred ecCCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc--
Q 008898 370 RDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-- 447 (549)
Q Consensus 370 rDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-- 447 (549)
|||||+|||++.+ +.+||+|||++......... .......+++.|+|||++.++.++.++|||||||++|||++
T Consensus 162 ~dlkp~Nill~~~-~~~kl~DfG~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 162 RDLATRNCLVGEN-LTIKIADFGMSRNLYAGDYY---RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred cCcchhheEEcCC-ccEEECCCccceecccCcee---EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 9999999999998 68999999998654332111 11123356789999999998899999999999999999987
Q ss_pred CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 448 GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 448 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
+..||..... .................. .. ..+..++..+.+++..||..||.+|||+.+|.+.|++
T Consensus 238 ~~~p~~~~~~--~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 238 KEQPYGELTD--EQVIENAGEFFRDQGRQV--YL----FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCCcCCH--HHHHHHHHHHhhhccccc--cc----cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 5567765432 112222222111111000 00 0112234568889999999999999999999998763
No 44
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.9e-40 Score=338.27 Aligned_cols=247 Identities=20% Similarity=0.282 Sum_probs=197.9
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
+.||+|+||.||++.. .+|+.||+|+++... .....+.+|+.+++.++||||+++++++..++.+++||||+ +|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999976 568999999997532 12245678999999999999999999999999999999999 67
Q ss_pred CHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcc
Q 008898 332 SLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVK 408 (549)
Q Consensus 332 sL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~ 408 (549)
+|..++.. +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++..... ....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~-----~~~~ 151 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKD-GHIKITDFGLCKEGIS-----DGAT 151 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCC-CCEEecccHHhccccC-----CCCc
Confidence 89888854 67788889999999999999999 99999999999999998 6899999999854221 1122
Q ss_pred ccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCC
Q 008898 409 PVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYN 488 (549)
Q Consensus 409 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 488 (549)
.....||+.|+|||++.++.++.++|||||||++|||++|+.||........ .. ..... +..++.
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~~----~~~~~-------~~~~p~--- 216 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FE----LILME-------EIRFPR--- 216 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-HH----HHhcC-------CCCCCC---
Confidence 2346799999999999999999999999999999999999999976543211 11 11000 011112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHH
Q 008898 489 REEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 489 ~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~ 534 (549)
.....+.+++..||..||.+|| ++.++++ |+||.......
T Consensus 217 -~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~-----h~~~~~~~~~~ 261 (323)
T cd05595 217 -TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME-----HRFFLSINWQD 261 (323)
T ss_pred -CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc-----CCCcCCCCHHH
Confidence 2334577888999999999998 8999998 88987655443
No 45
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.2e-40 Score=336.99 Aligned_cols=244 Identities=24% Similarity=0.286 Sum_probs=195.4
Q ss_pred EcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 260 IGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 260 lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
||+|+||.||++.+ .+++.+|+|+++... .....+.+|+.++++++||||+++++++.+.+.++++|||+ +|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999987 468899999997532 22345778999999999999999999999999999999999 7799
Q ss_pred HHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcccc
Q 008898 334 KQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPV 410 (549)
Q Consensus 334 ~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 410 (549)
.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++..... ......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~-----~~~~~~ 151 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQ-GHIALCDFGLCKLNMK-----DDDKTN 151 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCC-CcEEEEECcccccCcc-----CCCccc
Confidence 999854 67788888999999999999999 99999999999999998 6899999999864322 112233
Q ss_pred ccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHH
Q 008898 411 NVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNRE 490 (549)
Q Consensus 411 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 490 (549)
..+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......... ..+ +..
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~-----~~~~~~~~~-------~~~----~~~ 215 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE-----MYRKILQEP-------LRF----PDG 215 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH-----HHHHHHcCC-------CCC----CCc
Confidence 5679999999999999999999999999999999999999997653321 111111110 111 122
Q ss_pred HHHHHHHHHHHhcccCCCCCCC---HHHHHHHhcCCchhhhhhhHH
Q 008898 491 EIEIVMCAARLCLLHSSSRRPT---MKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 491 ~~~~l~~li~~Cl~~dP~~RPs---~~evl~~L~~~~~w~~~~~~~ 533 (549)
....+.+++..||..||.+||+ +.+++. |+||......
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~-----hp~~~~~~~~ 256 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN-----HPFFSQLSWK 256 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc-----CCCcCCCCHH
Confidence 3345778889999999999975 677777 8998876443
No 46
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=317.60 Aligned_cols=256 Identities=24% Similarity=0.356 Sum_probs=203.6
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecC---CcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCT---NWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
++++|++.+.||+|.|+.||++.+ .+|+.+|+|+++.. ..+.+++.+|+.|.+.|+||||++|.+...+....++|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 356788888999999999999966 67999999998543 34567899999999999999999999999999999999
Q ss_pred Eecc-CCCHH-HHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC--CCceEEeeecccccccc
Q 008898 326 YNLL-NGSLK-QYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN--FHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 326 ~e~~-~gsL~-~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~~kL~DFGla~~~~~ 399 (549)
+|++ +|+|. +..++ +++...-.++.||++||.|+|.+ +|||||+||+|+++.+. ..-+||+|||+|....
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~- 164 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN- 164 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence 9999 55664 44454 44455567899999999999999 99999999999999532 2368999999996643
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
.+.....++|||+|||||++...+|+..+|||+.|||||-||.|.+||.+....+ + .+.+.... --+
T Consensus 165 -----~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--l---ye~I~~g~---yd~ 231 (355)
T KOG0033|consen 165 -----DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--L---YEQIKAGA---YDY 231 (355)
T ss_pred -----CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--H---HHHHhccc---cCC
Confidence 3445567899999999999999999999999999999999999999998754322 2 22222111 111
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
++...+ ...+...+++++||..||.+|.|+.|.|+ |+|++...
T Consensus 232 ~~~~w~----~is~~Ak~LvrrML~~dP~kRIta~EAL~-----HpWi~~r~ 274 (355)
T KOG0033|consen 232 PSPEWD----TVTPEAKSLIRRMLTVNPKKRITADEALK-----HPWICNRE 274 (355)
T ss_pred CCcccC----cCCHHHHHHHHHHhccChhhhccHHHHhC-----CchhcchH
Confidence 222222 23345677889999999999999999998 99986544
No 47
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.2e-41 Score=315.90 Aligned_cols=258 Identities=27% Similarity=0.414 Sum_probs=207.9
Q ss_pred hhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-----CH----HHHHHHHHHHhcCC-CCCeeeEEEEEE
Q 008898 249 HLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-----SE----EEVLREVELLSSIK-HENIVRIIGYCH 317 (549)
Q Consensus 249 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-----~~----~~~~~E~~il~~l~-h~nIv~l~~~~~ 317 (549)
.+.+.|.+.+.||.|..+.|-++.+ .+|+.+|+|++..... .. +...+|+.||+++. ||||+.+.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3456788999999999999999876 6789999999864321 11 34567999999985 999999999999
Q ss_pred cCCeEEEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecc
Q 008898 318 SKEMYAIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGA 393 (549)
Q Consensus 318 ~~~~~~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGl 393 (549)
.+..+++|+|+| .|.|+++|.. +++.+...++.|+.+|++|||.+ +|+||||||+|||++++ .+++|+|||+
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn-~~i~isDFGF 169 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDN-MNIKISDFGF 169 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccc-cceEEeccce
Confidence 999999999999 8999999965 78888899999999999999999 99999999999999999 4899999999
Q ss_pred ccccccccccccCccccccccCCcccccccccc------CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHH
Q 008898 394 AMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY------GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWAR 467 (549)
Q Consensus 394 a~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~ 467 (549)
|.. ...+.+....||||+|+|||.+.. .+|+..+|+||+|||||-||.|.+||-.... +.+ -
T Consensus 170 a~~------l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ----mlM--L 237 (411)
T KOG0599|consen 170 ACQ------LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ----MLM--L 237 (411)
T ss_pred eec------cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH----HHH--H
Confidence 865 344556678899999999999853 3588899999999999999999999964432 222 1
Q ss_pred HhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 468 SLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
.++.+|..+ +-.| -=.+......+++++||+.||.+|.|.+|+|. |+||.+...+
T Consensus 238 R~ImeGkyq-F~sp-----eWadis~~~KdLIsrlLqVdp~~Ritake~La-----Hpff~q~~~~ 292 (411)
T KOG0599|consen 238 RMIMEGKYQ-FRSP-----EWADISATVKDLISRLLQVDPTKRITAKEALA-----HPFFIQIAQQ 292 (411)
T ss_pred HHHHhcccc-cCCc-----chhhccccHHHHHHHHHeeCchhcccHHHHhc-----ChHHHHHHHh
Confidence 222222211 1111 11233456788999999999999999999999 9999665543
No 48
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.6e-40 Score=338.61 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=198.1
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
+.||+|+||.||++.. .+|+.+|+|+++... .....+.+|+.+++.++||||+++++++..++.+++||||+ +|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999976 568999999997542 12345778999999999999999999999999999999999 77
Q ss_pred CHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcc
Q 008898 332 SLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVK 408 (549)
Q Consensus 332 sL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~ 408 (549)
+|..++.. +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++..... ....
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~-~~~kL~DfG~~~~~~~-----~~~~ 151 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKD-GHIKITDFGLCKEGIT-----DAAT 151 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCC-CcEEEecCcCCccCCC-----cccc
Confidence 89888853 67788889999999999999999 99999999999999988 6899999999854221 1112
Q ss_pred ccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCC
Q 008898 409 PVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYN 488 (549)
Q Consensus 409 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 488 (549)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... . ...... .+..++..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~--~---~~~~~~-------~~~~~p~~-- 217 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--L---FELILM-------EDIKFPRT-- 217 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH--H---HHHhcc-------CCccCCCC--
Confidence 234679999999999999999999999999999999999999997653321 1 111110 01112222
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHH
Q 008898 489 REEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 489 ~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~ 534 (549)
....+.+++..||..||.+|| ++.++++ |+||.......
T Consensus 218 --~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~-----h~~~~~~~~~~ 261 (328)
T cd05593 218 --LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR-----HSFFTGVNWQD 261 (328)
T ss_pred --CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc-----CCCcCCCCHHH
Confidence 234567788999999999997 8999998 88987765543
No 49
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8e-40 Score=330.41 Aligned_cols=243 Identities=20% Similarity=0.321 Sum_probs=194.2
Q ss_pred CCceEcccCceEEEEEEecCCcEEEEEEeecCCcCH----HHHHHHHHHHhcCCCCCeeeEEEEEEc----CCeEEEEEe
Q 008898 256 PKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSE----EEVLREVELLSSIKHENIVRIIGYCHS----KEMYAIVYN 327 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~~lv~e 327 (549)
....||+|++|.||+|.. +|+.+|||.++...... +.+.+|+.+|++++||||+++++++.+ ...++++||
T Consensus 24 ~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred CCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 336799999999999987 78899999997654433 456799999999999999999999866 457899999
Q ss_pred cc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+ +|+|.+++.. +++.....++.+++.||.|||+.. +++||||||+|||++.+ +.+||+|||++......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~-~~~kl~dfg~~~~~~~~--- 176 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTEN-YKLKIICHGLEKILSSP--- 176 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCC-CcEEEcccchHhhhccc---
Confidence 99 6789999954 678888999999999999999742 78899999999999998 68999999998653221
Q ss_pred ccCccccccccCCcccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMY--GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... + .......+. .+
T Consensus 177 -----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--~---~~~i~~~~~-----~~ 241 (283)
T PHA02988 177 -----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--I---YDLIINKNN-----SL 241 (283)
T ss_pred -----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--H---HHHHHhcCC-----CC
Confidence 123468899999999876 689999999999999999999999998654221 1 111111110 11
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
..+...+..+.+++.+||+.||.+|||+.++++.|+...
T Consensus 242 ----~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 242 ----KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ----CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 112234567888999999999999999999999887653
No 50
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-40 Score=328.53 Aligned_cols=259 Identities=22% Similarity=0.279 Sum_probs=209.9
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
+.|+..+.||.|.-|+||+++.. ++..+|+|++.+.... ...+..|.+||+.+.||++..||..++.+...+++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 45778889999999999999874 4689999999765433 234677999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 327 NLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 327 e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
||| +|+|...+++ ++...+..++..++.||+|||.+ |||+|||||+||||.++ |++.|+||.++......
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvred-GHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVRED-GHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecC-CcEEeeeccccccCCCC
Confidence 999 8899988854 77888889999999999999999 99999999999999999 89999999997432110
Q ss_pred c---------------------------------c------------------cccCccccccccCCccccccccccCCC
Q 008898 401 H---------------------------------Q------------------VSENVKPVNVVGTFGYLAPEYMMYGKV 429 (549)
Q Consensus 401 ~---------------------------------~------------------~~~~~~~~~~~gt~~y~APE~~~~~~~ 429 (549)
. . .....+...++||-.|+|||++.|.+.
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 001123346899999999999999999
Q ss_pred CchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCC
Q 008898 430 DEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSR 509 (549)
Q Consensus 430 ~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~ 509 (549)
+.++|||+|||++||||.|..||.+...... +.. . +-..+.-.-.+.......+||+..|.+||.+
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-l~N---I----------v~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-LRN---I----------VGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhh-HHH---H----------hcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 9999999999999999999999987764432 211 1 1111111111244567888999999999999
Q ss_pred CCC----HHHHHHHhcCCchhhhhhhHH
Q 008898 510 RPT----MKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 510 RPs----~~evl~~L~~~~~w~~~~~~~ 533 (549)
|.. +.||-+ |+||+..++.
T Consensus 379 Rlg~~rGA~eIK~-----HpFF~gVnWa 401 (459)
T KOG0610|consen 379 RLGSKRGAAEIKR-----HPFFEGVNWA 401 (459)
T ss_pred hhccccchHHhhc-----CccccCCChh
Confidence 998 888888 8888888887
No 51
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.1e-40 Score=341.26 Aligned_cols=252 Identities=20% Similarity=0.314 Sum_probs=202.9
Q ss_pred cCCCCCceEcccCceEEEEEEec-C-CcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-D-GQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~-g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
++|...+.||+|+||.||+|.+. + +..+|+|++.... ...+.+.+|+.+++.++||||+++++++.+++.++++
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 46889999999999999999753 3 4689999986532 2234678899999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
|||+ +|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~-~~ikL~DFG~a~~~~~-- 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKD-GFIKMTDFGFAKVVDT-- 183 (340)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCC-CCEEEecCCCCeecCC--
Confidence 9999 7799999854 67778889999999999999999 99999999999999988 6999999999865422
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
......||+.|+|||++.+..++.++|||||||++|||++|..||....... .+. .+.. +. .
T Consensus 184 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~----~~~-~i~~-~~------~ 245 (340)
T PTZ00426 184 ------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL----IYQ-KILE-GI------I 245 (340)
T ss_pred ------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH----HHH-HHhc-CC------C
Confidence 1235679999999999998889999999999999999999999997654311 111 1111 10 0
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHHHH
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKEEL 536 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~~~ 536 (549)
.++..++ ..+.+++++|++.||.+|+ +++++++ |+||.........
T Consensus 246 ~~p~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~-----hp~f~~~~~~~~~ 296 (340)
T PTZ00426 246 YFPKFLD----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE-----HPWFGNIDWVSLL 296 (340)
T ss_pred CCCCCCC----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHc-----CCCcCCCCHHHHH
Confidence 1112222 3467788999999999995 8999998 8999876554433
No 52
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.4e-39 Score=334.15 Aligned_cols=264 Identities=25% Similarity=0.349 Sum_probs=203.8
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.++|+..+.||+|+||.||++.+ .+|..+|+|++..... ....+.+|+++++.++||||+++++++..++.++++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 36899999999999999999987 4688999999875432 23568899999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+ +|+|.+++.. +++.....++.|++.||.|||+.+ +|+||||||+|||++.+ +.++|+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~--- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS--- 157 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCC-CcEEEccCccccccccc---
Confidence 99 6799999864 677788899999999999999852 69999999999999998 68999999998543221
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHH-Hhhcccc--------
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWAR-SLLSSGL-------- 474 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~-~~~~~~~-------- 474 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... +..... .......
T Consensus 158 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISP 231 (331)
T ss_pred ----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCc
Confidence 1234579999999999999999999999999999999999999997543211 111100 0000000
Q ss_pred -------------------------cccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 475 -------------------------CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 475 -------------------------~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
...+................+.+++.+||..||++|||++++++ |+|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~-----h~~~~~ 306 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN-----HTFIKR 306 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc-----ChHHhh
Confidence 00000000000001123456788999999999999999999998 899876
Q ss_pred hh
Q 008898 530 KR 531 (549)
Q Consensus 530 ~~ 531 (549)
..
T Consensus 307 ~~ 308 (331)
T cd06649 307 SE 308 (331)
T ss_pred cc
Confidence 54
No 53
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1e-39 Score=343.60 Aligned_cols=262 Identities=20% Similarity=0.264 Sum_probs=199.3
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.|...+.||+|+||.||+|.+ .+++.+|+|+++.... ....+.+|+.+++.++||||+++++++.+.+.++++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 588889999999999999976 5689999999975432 12457889999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+ +|+|.+++.+ +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.........
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~-~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLD-GHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCC-CCEEEeeCcCCccccccccc
Confidence 99 7799999855 56677788899999999999999 99999999999999988 79999999997532110000
Q ss_pred ------------------------------------------ccCccccccccCCccccccccccCCCCchhhHHHHHHH
Q 008898 404 ------------------------------------------SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVV 441 (549)
Q Consensus 404 ------------------------------------------~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvi 441 (549)
.........+||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00001134679999999999999899999999999999
Q ss_pred HHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHH--hcccCCCCCCCHHHHHHH
Q 008898 442 LLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARL--CLLHSSSRRPTMKTLLKL 519 (549)
Q Consensus 442 l~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~--Cl~~dP~~RPs~~evl~~ 519 (549)
+|||++|..||........... ....... ..-+ ....++.+.. +++.+ |+..+|..||++.++++
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~----i~~~~~~---~~~~-~~~~~s~~~~----dli~~ll~~~~~~~~R~~~~~~l~- 304 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLK----VINWENT---LHIP-PQVKLSPEAV----DLITKLCCSAEERLGRNGADDIKA- 304 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHH----HHccccc---cCCC-CCCCCCHHHH----HHHHHHccCcccccCCCCHHHHhc-
Confidence 9999999999976554222111 0000000 0000 1112344444 44444 66777778999999998
Q ss_pred hcCCchhhhhhhHHHH
Q 008898 520 FQEPDYWLKMKREKEE 535 (549)
Q Consensus 520 L~~~~~w~~~~~~~~~ 535 (549)
|+||........
T Consensus 305 ----hp~f~~~~~~~~ 316 (381)
T cd05626 305 ----HPFFSEVDFSSD 316 (381)
T ss_pred ----CcccCCCChhHH
Confidence 899987655443
No 54
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.1e-40 Score=319.69 Aligned_cols=261 Identities=25% Similarity=0.289 Sum_probs=205.4
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCH---HHHHHHHHHHhcCCCCCeeeEEEEEE--cCCeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSE---EEVLREVELLSSIKHENIVRIIGYCH--SKEMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~l 324 (549)
-++|+..+.|++|+||.||+|++ .+++.||+|.++.+.... -...+||.+|.+++|||||.+-.+.. +-+.+|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 35688899999999999999976 678999999998665221 24689999999999999999988775 3467999
Q ss_pred EEeccCCCHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLLNGSLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~~gsL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
||||+..+|...+. .+...+...++.|++.|++|||.+ .|+||||||+|+|++.. |.+||+|||+|+....
T Consensus 155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~-G~lKiaDFGLAR~ygs- 229 (419)
T KOG0663|consen 155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHK-GILKIADFGLAREYGS- 229 (419)
T ss_pred eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccC-CcEEecccchhhhhcC-
Confidence 99999998888884 466778889999999999999999 99999999999999999 7999999999965443
Q ss_pred cccccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
.....+..+-|..|.|||.+.+.+ |+.++|+||+|||+.||+++++.|.+..+- +++......+. ...+-+
T Consensus 230 ----p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-dQl~~If~llG---tPte~i 301 (419)
T KOG0663|consen 230 ----PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-DQLDKIFKLLG---TPSEAI 301 (419)
T ss_pred ----CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-HHHHHHHHHhC---CCcccc
Confidence 233445667799999999998764 899999999999999999999999887652 23333222221 111111
Q ss_pred CCcc-------------------cccCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 480 DPQL-------------------NEEYNRE-EIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 480 d~~l-------------------~~~~~~~-~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
.|.+ ...+... ..+.-++++...|..||.+|.|+++.|+ |.||..
T Consensus 302 wpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~-----h~~F~e 366 (419)
T KOG0663|consen 302 WPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK-----HEYFRE 366 (419)
T ss_pred CCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc-----cccccc
Confidence 1111 0111111 2356677889999999999999999998 889865
No 55
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3e-39 Score=337.80 Aligned_cols=265 Identities=21% Similarity=0.336 Sum_probs=198.4
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|+..+.||+|+||.||++.+ .+++.+|+|+++.... ....+.+|+.++..++||||+++++.+.+++.+++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4788999999999999999977 4689999999975421 1245778999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.+ +++.....++.|++.||.|||++ +|+||||||+|||++.+ +.+||+|||++........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~-~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSK-GHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCC-CCEEEeeccCccccccccc
Confidence 999 6799999854 67788889999999999999999 99999999999999998 7999999999865432110
Q ss_pred c------------------------------ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 008898 403 V------------------------------SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAI 452 (549)
Q Consensus 403 ~------------------------------~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~ 452 (549)
. .........+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0 0001113468999999999999999999999999999999999999999
Q ss_pred CCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 453 QTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 453 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
........ . ..+.... ..+..+. ...++.+..+.+..+ .|...++..||++.+|++ |+||.....
T Consensus 237 ~~~~~~~~-~----~~i~~~~--~~~~~p~-~~~~s~~~~~li~~l--~~~~~~r~~r~~~~ei~~-----hp~f~~~~~ 301 (363)
T cd05628 237 CSETPQET-Y----KKVMNWK--ETLIFPP-EVPISEKAKDLILRF--CCEWEHRIGAPGVEEIKT-----NPFFEGVDW 301 (363)
T ss_pred CCCCHHHH-H----HHHHcCc--CcccCCC-cCCCCHHHHHHHHHH--cCChhhcCCCCCHHHHhC-----CCCCCCCCH
Confidence 76543211 1 1111100 0111111 012334333333222 133334456799999998 899987765
Q ss_pred HHH
Q 008898 533 KEE 535 (549)
Q Consensus 533 ~~~ 535 (549)
..-
T Consensus 302 ~~~ 304 (363)
T cd05628 302 EHI 304 (363)
T ss_pred HHH
Confidence 543
No 56
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6e-41 Score=361.13 Aligned_cols=247 Identities=28% Similarity=0.470 Sum_probs=205.3
Q ss_pred CCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
+....+.||+|+||+||+|+.. +...||||.++..... ..+|.+|++.|..|+|||||+|+|+|.+++.+++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 4445567999999999999542 2468999999876544 4689999999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH-----------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCce
Q 008898 325 VYNLL-NGSLKQYLKQ-----------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHP 386 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~-----------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~ 386 (549)
|+||| .|+|.+||+. ++..+.+.||.|||.|+.||-++ .++||||..+|+||.++. .+
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l-~V 642 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL-VV 642 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce-EE
Confidence 99999 8999999942 55678899999999999999999 999999999999999995 89
Q ss_pred EEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHH
Q 008898 387 QLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLW 465 (549)
Q Consensus 387 kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~ 465 (549)
||+|||+++.....++...... ..-..+|||||.+++++|+.++|||||||+|||+++ |+.|+.....++ .+
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~---t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-VI--- 715 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGN---TLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-VI--- 715 (774)
T ss_pred EecccccchhhhhhhhhcccCC---ceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-HH---
Confidence 9999999988777665543321 123568999999999999999999999999999998 888887765432 12
Q ss_pred HHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 466 ARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 466 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
.....+.+ -+.+..++..++.++..||..+|.+||+++||-..|+
T Consensus 716 --e~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 716 --ECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred --HHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 11222222 2335677889999999999999999999999998874
No 57
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.5e-39 Score=334.44 Aligned_cols=253 Identities=23% Similarity=0.348 Sum_probs=194.7
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
+|+..+.||+|+||.||++.+ .+|+.||||++...... ...+.+|+++++.++|+||+++++++..++.++++|||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 466677899999999999987 56899999999654322 356889999999999999999999999999999999999
Q ss_pred -CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcc
Q 008898 330 -NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVK 408 (549)
Q Consensus 330 -~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~ 408 (549)
+|+|.+.. .........++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++....... ..
T Consensus 155 ~~~~L~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~-~~~kL~DfG~~~~~~~~~-----~~ 224 (353)
T PLN00034 155 DGGSLEGTH-IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSA-KNVKIADFGVSRILAQTM-----DP 224 (353)
T ss_pred CCCcccccc-cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCC-CCEEEcccccceeccccc-----cc
Confidence 56776542 244566778999999999999999 99999999999999998 689999999986543211 11
Q ss_pred ccccccCCcccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 409 PVNVVGTFGYLAPEYMMY-----GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 409 ~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
.....||+.|+|||++.. ...+.++|||||||++|||++|+.||........ .......... ..+.
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~~------~~~~- 295 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW--ASLMCAICMS------QPPE- 295 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH--HHHHHHHhcc------CCCC-
Confidence 234579999999998743 2245689999999999999999999974332211 1111111000 0011
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
........+.+++..||..||.+|||+.|+++ |+|+.....
T Consensus 296 ---~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~-----hp~~~~~~~ 336 (353)
T PLN00034 296 ---APATASREFRHFISCCLQREPAKRWSAMQLLQ-----HPFILRAQP 336 (353)
T ss_pred ---CCCccCHHHHHHHHHHccCChhhCcCHHHHhc-----CcccccCCc
Confidence 11223456788899999999999999999999 899987643
No 58
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=337.88 Aligned_cols=254 Identities=26% Similarity=0.353 Sum_probs=211.4
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~l 324 (549)
...|...+.||+|.||.||++.. .+|+.+|+|++++... ..+.+.+|+.||+++. ||||+.++++|++.+.+++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 45688889999999999999987 4599999999976543 3367899999999998 9999999999999999999
Q ss_pred EEecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC---CceEEeeeccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF---HHPQLSDFGAAMVHH 398 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~---~~~kL~DFGla~~~~ 398 (549)
|||++ +|.|.+.+.. +++.....++.|+++|+.|||+. ||+||||||+|+|+.... +.++++|||++....
T Consensus 114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 99999 6889999866 78888899999999999999999 999999999999996542 369999999997644
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
. .......+||+.|+|||++....|+..+||||+||++|.|++|.+||.........+ .+.. +..
T Consensus 191 ~------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-----~i~~-~~~--- 255 (382)
T KOG0032|consen 191 P------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-----AILR-GDF--- 255 (382)
T ss_pred C------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-----HHHc-CCC---
Confidence 3 334567899999999999999999999999999999999999999998876533322 1111 111
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
.....+-....+.+.++++.|+..||..|+|+.++++ |+|+...
T Consensus 256 ---~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~-----HpWi~~~ 299 (382)
T KOG0032|consen 256 ---DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ-----HPWIKSI 299 (382)
T ss_pred ---CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc-----CccccCC
Confidence 2222222334566778889999999999999999999 8998753
No 59
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.2e-39 Score=335.27 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=198.1
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHH---hcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELL---SSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il---~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
|.+.+.||+|+||.||++.+ .+|+.+|||+++... ...+.+.+|+.++ +.++||||+++++++..++.+++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56788999999999999976 568999999997542 1224466666654 567899999999999999999999
Q ss_pred Eecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
|||+ +|+|..++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~-~~~kL~Dfg~~~~~~~--- 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTE-GFVKIADFGLCKEGMG--- 153 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCC-CcEEeCcccCCccCCC---
Confidence 9999 6789888754 78888899999999999999999 99999999999999998 6899999999854221
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||....... . ...+.... ..
T Consensus 154 --~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-~----~~~i~~~~-------~~ 219 (324)
T cd05589 154 --FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-V----FDSIVNDE-------VR 219 (324)
T ss_pred --CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-H----HHHHHhCC-------CC
Confidence 1122345679999999999999999999999999999999999999997654321 1 11111110 11
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
.+. .....+.+++.+||..||.+|| ++.++++ |+||+.......
T Consensus 220 ~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~-----~~~f~~~~~~~~ 268 (324)
T cd05589 220 YPR----FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK-----QPFFRDINWDDL 268 (324)
T ss_pred CCC----CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh-----CCCcCCCCHHHH
Confidence 112 2234567888999999999999 6788877 789877654443
No 60
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.3e-39 Score=340.35 Aligned_cols=260 Identities=21% Similarity=0.311 Sum_probs=201.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|+..+.||+|+||.||++.. .+|+.+|||+++.... ....+.+|+.+++.++||||+++++++.+++.++++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4788999999999999999987 4689999999975421 2245678999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++........
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAK-GHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCC-CCEEEeecccceecccccc
Confidence 999 7799999854 67788889999999999999999 99999999999999998 6899999999865432110
Q ss_pred cc---------------------------------cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCC
Q 008898 403 VS---------------------------------ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGK 449 (549)
Q Consensus 403 ~~---------------------------------~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~ 449 (549)
.. ........+||+.|+|||++....++.++|||||||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 00 000112357999999999999999999999999999999999999
Q ss_pred CCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHhcCCchh
Q 008898 450 EAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT---MKTLLKLFQEPDYW 526 (549)
Q Consensus 450 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs---~~evl~~L~~~~~w 526 (549)
.||........ . ..+.... ..+..+ . .......+.+++..|+. +|.+|++ +.++++ |+|
T Consensus 237 ~Pf~~~~~~~~-~----~~i~~~~--~~~~~~---~--~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~-----h~~ 298 (364)
T cd05599 237 PPFCSDNPQET-Y----RKIINWK--ETLQFP---D--EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS-----HPF 298 (364)
T ss_pred CCCCCCCHHHH-H----HHHHcCC--CccCCC---C--CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc-----CCC
Confidence 99976543221 1 1111100 000001 0 00123345667788886 9999998 999998 899
Q ss_pred hhhhhHH
Q 008898 527 LKMKREK 533 (549)
Q Consensus 527 ~~~~~~~ 533 (549)
|+.....
T Consensus 299 ~~~~~~~ 305 (364)
T cd05599 299 FKGVDWE 305 (364)
T ss_pred cCCCCHH
Confidence 9776543
No 61
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.5e-39 Score=338.82 Aligned_cols=268 Identities=21% Similarity=0.263 Sum_probs=203.5
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcC------
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSK------ 319 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 319 (549)
..++|...+.||+|+||.||++.. .+++.+|+|.+...... ...+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 356899999999999999999976 56899999999754322 34677899999999999999999988543
Q ss_pred CeEEEEEeccCCCHHHHHH-HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 320 EMYAIVYNLLNGSLKQYLK-QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 320 ~~~~lv~e~~~gsL~~~l~-~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
..++++|||+.++|.+++. .+++.....++.|+++||.|||+. +|+||||||+|||++.+ +.+||+|||++....
T Consensus 95 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~-~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSD-CTLKILDFGLARTAG 170 (355)
T ss_pred ceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCC-CCEEEeeCcccccCC
Confidence 3579999999999888774 367788888999999999999999 99999999999999998 689999999986533
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHh---------
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSL--------- 469 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~--------- 469 (549)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .....+
T Consensus 171 ~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~ 243 (355)
T cd07874 171 TS------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN-KVIEQLGTPCPEFMK 243 (355)
T ss_pred Cc------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCHHHHH
Confidence 21 12234578999999999999999999999999999999999999997654321110 000000
Q ss_pred ---------hcc-cccccccCCc------c--cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 470 ---------LSS-GLCERLIDPQ------L--NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 470 ---------~~~-~~~~~~~d~~------l--~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
... .....+..+. . ...........+.+++.+||..||++|||+.++++ |+|+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~-----hp~~~~~~ 318 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ-----HPYINVWY 318 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc-----Ccchhccc
Confidence 000 0000000000 0 00111122356788999999999999999999998 89997654
Q ss_pred HH
Q 008898 532 EK 533 (549)
Q Consensus 532 ~~ 533 (549)
..
T Consensus 319 ~~ 320 (355)
T cd07874 319 DP 320 (355)
T ss_pred Ch
Confidence 43
No 62
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4e-40 Score=341.96 Aligned_cols=261 Identities=23% Similarity=0.295 Sum_probs=205.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|.+.+.||+|+||.||++.. .+|+.+|+|+++... .....+..|+.++..++||||+++++++.+++.+++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 3688999999999999999987 469999999997543 22345788999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc-
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH- 401 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~- 401 (549)
||+ +|+|.+++.. ++......++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDAD-GHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCC-CCEEeecCCCCccCcccCc
Confidence 999 7799999854 67788889999999999999998 99999999999999998 689999999986544321
Q ss_pred -----------------------ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc
Q 008898 402 -----------------------QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN 458 (549)
Q Consensus 402 -----------------------~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~ 458 (549)
............||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 000011233567999999999999999999999999999999999999999866532
Q ss_pred hhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHhcCCchhhhhhhHHH
Q 008898 459 RESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT-MKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 459 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-~~evl~~L~~~~~w~~~~~~~~ 534 (549)
.. + ..+.... ..+.-+.. ......+.+++..|+. ||.+||+ +.++++ |+|++......
T Consensus 237 ~~----~-~~i~~~~--~~~~~p~~-----~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~-----hp~~~~~~~~~ 295 (350)
T cd05573 237 ET----Y-NKIINWK--ESLRFPPD-----PPVSPEAIDLICRLLC-DPEDRLGSFEEIKS-----HPFFKGIDWEN 295 (350)
T ss_pred HH----H-HHHhccC--CcccCCCC-----CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc-----CCCcCCCCHHH
Confidence 11 1 1111100 00101110 1134557778889997 9999999 999998 89987655443
No 63
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=322.02 Aligned_cols=273 Identities=23% Similarity=0.307 Sum_probs=210.5
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCC-eeeEEEEEEcCC------e
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHEN-IVRIIGYCHSKE------M 321 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~------~ 321 (549)
.|...+.||+|+||+||+|.. .+|+.||+|.+..+.. .+....+|+-+|+.|+|+| |+.|++++.+.+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 355566799999999999976 6799999999986644 3466899999999999999 999999998877 8
Q ss_pred EEEEEeccCCCHHHHHHHhc-------hhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 322 YAIVYNLLNGSLKQYLKQLK-------WNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~~~-------~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
+++|+||+.-+|..++...+ ...+..++.||+.||.|||++ +|+||||||.||||+++ |.+||+|||+|
T Consensus 92 l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~-G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSS-GVLKLADFGLA 167 (323)
T ss_pred EEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCC-CcEeeeccchH
Confidence 99999999999999997644 346788999999999999999 99999999999999998 89999999999
Q ss_pred cccccccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc
Q 008898 395 MVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG 473 (549)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~ 473 (549)
+...- ........++|..|.|||++.+. .|+..+||||+|||++||+++++.|.+..+. +.+......+.-.+
T Consensus 168 ra~~i-----p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~-~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 168 RAFSI-----PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI-DQLFRIFRLLGTPN 241 (323)
T ss_pred HHhcC-----CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH-HHHHHHHHHcCCCC
Confidence 74331 22224566789999999999987 6899999999999999999999999887753 22322222222111
Q ss_pred ---cc--ccccCCc--cc-----ccCCHHHH---HHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHHHHh
Q 008898 474 ---LC--ERLIDPQ--LN-----EEYNREEI---EIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEELLN 538 (549)
Q Consensus 474 ---~~--~~~~d~~--l~-----~~~~~~~~---~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~~~~ 538 (549)
+. ..+.+-. .. ..+..... ....+++.+|++.+|.+|.|++..++ |+||..-......+.
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~-----h~yf~~~~~~~~~~~ 316 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT-----HPYFSELPEKSSQLL 316 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc-----Chhhcccccchhhhh
Confidence 10 0111111 11 11111112 36788999999999999999999999 788876655554444
Q ss_pred hc
Q 008898 539 ER 540 (549)
Q Consensus 539 ~~ 540 (549)
..
T Consensus 317 ~~ 318 (323)
T KOG0594|consen 317 LQ 318 (323)
T ss_pred cc
Confidence 33
No 64
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.3e-39 Score=342.13 Aligned_cols=250 Identities=24% Similarity=0.363 Sum_probs=195.0
Q ss_pred cCCCCCceEcccCceEEEEEEe------cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH------VDGQVAAVKVLKCTNW--SEEEVLREVELLSSI-KHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 322 (549)
++|+..+.||+|+||.||+|.. .++..+|||+++.... ..+.+.+|+.+++.+ +||||++++++|..++..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4688899999999999999853 2366899999975432 234678999999999 899999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH--------------------------------------------------------------
Q 008898 323 AIVYNLL-NGSLKQYLKQ-------------------------------------------------------------- 339 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~-------------------------------------------------------------- 339 (549)
+++|||+ +|+|.+++..
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 9999999 7899988853
Q ss_pred ----------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 340 ----------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 340 ----------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHG-RITKICDFGLARDIRNDSNY 270 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECC-CcEEEecCccceeccCcccc
Confidence 34556778999999999999999 99999999999999988 68999999998654332111
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||........ +..+. ..+.. +.
T Consensus 271 ---~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~~~----~~~~~-----~~ 337 (375)
T cd05104 271 ---VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYKMI----KEGYR-----ML 337 (375)
T ss_pred ---cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHHHH----HhCcc-----CC
Confidence 11112345678999999999999999999999999999998 8888866543221 11111 11110 00
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. +...+..+.+++..||..||.+|||+.+|++.|++
T Consensus 338 ~----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 338 S----PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred C----CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 0 11123467889999999999999999999998864
No 65
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.6e-39 Score=333.87 Aligned_cols=256 Identities=22% Similarity=0.281 Sum_probs=199.9
Q ss_pred CCCCCceEcccCceEEEEEEe----cCCcEEEEEEeecCC-----cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH----VDGQVAAVKVLKCTN-----WSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~~AvK~l~~~~-----~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 322 (549)
+|++.+.||+|+||.||++.. .+++.+|+|+++... ...+.+..|+.+++.+ +||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999865 358899999997532 1224577899999999 599999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
+++|||+ +|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~-~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSE-GHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCC-CCEEEeeCcCCcccc
Confidence 9999999 6799998854 67788889999999999999999 99999999999999998 689999999986532
Q ss_pred cccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
... ........||+.|+|||++.+. .++.++|||||||++|||++|..||........ ...+......
T Consensus 157 ~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~------ 225 (332)
T cd05614 157 SEE----KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILK------ 225 (332)
T ss_pred ccC----CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhc------
Confidence 211 1122346799999999998865 478999999999999999999999975432111 1111111111
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHH
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~ 533 (549)
.++.+... ....+.+++..||..||.+|| +++++++ |+|++.....
T Consensus 226 -~~~~~~~~----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~-----h~~~~~~~~~ 276 (332)
T cd05614 226 -CDPPFPSF----IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE-----HPFFKGLDWE 276 (332)
T ss_pred -CCCCCCCC----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc-----CCCcCCCCHH
Confidence 12222222 234567788999999999999 7889998 8998765433
No 66
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-39 Score=333.69 Aligned_cols=246 Identities=24% Similarity=0.333 Sum_probs=195.7
Q ss_pred ceEcccCceEEEEEEe----cCCcEEEEEEeecCC-----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 258 MLIGQGGNSKVYRTNH----VDGQVAAVKVLKCTN-----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~----~~g~~~AvK~l~~~~-----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+.||+|+||.||++.. .+++.+|+|+++... .....+..|+.+++.++||||+++++++..++.++++|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999965 357899999997532 1224567899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+ +|+|.+++.. +.+.....++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~----- 152 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQ-GHVKLTDFGLCKESIH----- 152 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCC-CCEEEeeCcCCeeccc-----
Confidence 9 6799999865 45667778899999999999999 99999999999999998 6899999999854322
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... . ..++
T Consensus 153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~-----~~~~~~~-~------~~~~ 220 (323)
T cd05584 153 EGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT-----IDKILKG-K------LNLP 220 (323)
T ss_pred CCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcC-C------CCCC
Confidence 11222345799999999999988899999999999999999999999976543211 1111111 0 1111
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHH
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~ 533 (549)
. .....+.+++..||..||.+|| ++.++++ |+|++.....
T Consensus 221 ~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~-----h~~~~~~~~~ 265 (323)
T cd05584 221 P----YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS-----HPFFRHVNWD 265 (323)
T ss_pred C----CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc-----CCCcCCCCHH
Confidence 1 2234577888999999999999 8999998 8898765443
No 67
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-39 Score=338.94 Aligned_cols=264 Identities=22% Similarity=0.290 Sum_probs=200.5
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC-----
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKE----- 320 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 320 (549)
..++|...+.||+|+||.||++.+ .+|+.+|+|++..... ....+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 346899999999999999999977 5689999999965422 2356778999999999999999999886443
Q ss_pred -eEEEEEeccCCCHHHHHH-HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 321 -MYAIVYNLLNGSLKQYLK-QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 321 -~~~lv~e~~~gsL~~~l~-~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
.++++|||+.++|.+.+. .++......++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++....
T Consensus 99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~-~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 99 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSD-CTLKILDFGLARTAC 174 (359)
T ss_pred ceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCC-CCEEEecCCCccccc
Confidence 579999999988887764 467778888999999999999999 99999999999999998 689999999986432
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc-----
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG----- 473 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~----- 473 (549)
. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||....... .+...........
T Consensus 175 ~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 175 T------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred c------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCcHHHHH
Confidence 2 112234578999999999999999999999999999999999999998654311 1111000000000
Q ss_pred ----cccccc--CCccc----------------ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 474 ----LCERLI--DPQLN----------------EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 474 ----~~~~~~--d~~l~----------------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
....+. .+... ..........+.+++.+||..||.+|||+.|+++ |+|+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~-----hp~~~~ 320 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR-----HPYITV 320 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc-----Cchhhh
Confidence 000000 00000 0001112355788999999999999999999998 899864
No 68
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1e-39 Score=336.01 Aligned_cols=246 Identities=20% Similarity=0.288 Sum_probs=196.6
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
+.||+|+||.||++.+ .+|+.+|+|+++... .....+..|+.+++.++||||+++++++..++.+++||||+ +|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999976 578999999997542 12245678999999999999999999999999999999999 67
Q ss_pred CHHHHHHH---hchhHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 332 SLKQYLKQ---LKWNERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 332 sL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
+|..++.. +++.....++.||+.||.|||+ . +|+||||||+|||++.+ +.+||+|||++..... ...
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~-~~~kL~Dfg~~~~~~~-----~~~ 151 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIK-----DGA 151 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCC-CCEEEecCCCCeecCC-----CCc
Confidence 89888854 6778888999999999999997 6 99999999999999998 6899999999854221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... . ....... ...++..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~--~---~~~i~~~-------~~~~p~~~ 219 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--L---FELILME-------EIRFPRTL 219 (325)
T ss_pred ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH--H---HHHHhcC-------CCCCCCCC
Confidence 2234579999999999999999999999999999999999999997654321 1 1111100 11112222
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~ 533 (549)
...+.+++..||+.||.+|+ ++.++++ |+||......
T Consensus 220 ----~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~-----h~~~~~~~~~ 261 (325)
T cd05594 220 ----SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ-----HKFFAGIVWQ 261 (325)
T ss_pred ----CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc-----CCCcCCCCHH
Confidence 34567788999999999997 8999998 8898865544
No 69
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-40 Score=336.37 Aligned_cols=245 Identities=26% Similarity=0.443 Sum_probs=199.2
Q ss_pred CCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHH
Q 008898 256 PKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLK 334 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~ 334 (549)
.++-||.|+.|.||+|+.. ++.||||.++ +.-..+|+-|++|+||||+.+.|+|.....|+|+|||| .|-|.
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~------elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVR------ELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHh------hhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 3456999999999999874 6789999875 22235788899999999999999999999999999999 89999
Q ss_pred HHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccc
Q 008898 335 QYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVN 411 (549)
Q Consensus 335 ~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~ 411 (549)
+.|+. +.......+..+||.|+.|||.+ .|||||||.=||||+.+ ..+||+|||.++.... ......
T Consensus 201 ~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~-d~VKIsDFGTS~e~~~------~STkMS 270 (904)
T KOG4721|consen 201 EVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYD-DVVKISDFGTSKELSD------KSTKMS 270 (904)
T ss_pred HHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeecc-ceEEeccccchHhhhh------hhhhhh
Confidence 99965 55566677889999999999999 99999999999999988 5899999998755332 234457
Q ss_pred cccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHH
Q 008898 412 VVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREE 491 (549)
Q Consensus 412 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 491 (549)
++||..|||||++...+.++|+|||||||+|||||||.-||..-.... . +..-| ...+--..+..+
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA---I-----IwGVG------sNsL~LpvPstc 336 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA---I-----IWGVG------SNSLHLPVPSTC 336 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe---e-----EEecc------CCcccccCcccC
Confidence 899999999999999999999999999999999999999986543211 1 11111 011222345667
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc---------hhhhhhh
Q 008898 492 IEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD---------YWLKMKR 531 (549)
Q Consensus 492 ~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~---------~w~~~~~ 531 (549)
++-+..|++.||+..|++||++++|+..|+=-. .||+.+.
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~~tee~yf~sq~ 385 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLSTTEETYFKSQA 385 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhcccHHHHHHHHH
Confidence 788899999999999999999999998775322 6776655
No 70
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2e-39 Score=341.40 Aligned_cols=262 Identities=21% Similarity=0.277 Sum_probs=197.3
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.|...+.||+|+||.||+|.. .+++.+|+|++..... ....+.+|+.+++.++||||+++++.+.+++.+++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999977 5688999999975432 12457789999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc-
Q 008898 328 LL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ- 402 (549)
Q Consensus 328 ~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~- 402 (549)
|+ +|+|.+++.+ ++......++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+|........
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~-g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC-CCEEEeECCCCccccccccc
Confidence 99 6799999854 56677788899999999999999 99999999999999998 7999999999753211000
Q ss_pred -----------------------------------------cccCccccccccCCccccccccccCCCCchhhHHHHHHH
Q 008898 403 -----------------------------------------VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVV 441 (549)
Q Consensus 403 -----------------------------------------~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvi 441 (549)
..........+||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000011124579999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 008898 442 LLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT---MKTLLK 518 (549)
Q Consensus 442 l~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs---~~evl~ 518 (549)
+|||++|++||.......... ...... .....+. ...++.+ ..+++.+|+ .+|.+|++ +.++++
T Consensus 238 l~elltG~~Pf~~~~~~~~~~-----~i~~~~--~~~~~p~-~~~~s~~----~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQM-----KVINWQ--TSLHIPP-QAKLSPE----ASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHH-----HHHccC--CCcCCCC-cccCCHH----HHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999998654322111 010000 0000010 1123333 344445554 49999997 888887
Q ss_pred HhcCCchhhhhhhHHHHH
Q 008898 519 LFQEPDYWLKMKREKEEL 536 (549)
Q Consensus 519 ~L~~~~~w~~~~~~~~~~ 536 (549)
|+||+........
T Consensus 305 -----hp~f~~~~~~~~~ 317 (382)
T cd05625 305 -----HPFFKTIDFSSDL 317 (382)
T ss_pred -----CCCcCCcChHHHH
Confidence 8999876555443
No 71
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-40 Score=331.34 Aligned_cols=250 Identities=22% Similarity=0.388 Sum_probs=213.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.=|..++-||+|-|+.|-+++| .+|.+||||++.+.. .....++.|+..|+.++|||||+||.+..+...+|++.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 3477778899999999999988 789999999997654 344679999999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 328 LL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 328 ~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+- +|+|++|+-+ +.+....+++.||..|+.|+|+. .++||||||+|+.+-+..|-+||+|||++..
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNk------ 168 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNK------ 168 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecccccc------
Confidence 99 6799999943 67777889999999999999999 8999999999999999889999999999743
Q ss_pred cccCccccccccCCccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVD-EKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~-~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
...+....+.||...|-|||++.+..|+ +++||||||||||-|++|++||+...+.. . +..++|.
T Consensus 169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-T-------------LTmImDC 234 (864)
T KOG4717|consen 169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-T-------------LTMIMDC 234 (864)
T ss_pred CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-h-------------hhhhhcc
Confidence 4455566788999999999999999996 68999999999999999999998765432 1 2334555
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
.+. .+........++|..||.+||.+|.+.++|.. +.|++...
T Consensus 235 KYt--vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s-----~~Wlq~~D 277 (864)
T KOG4717|consen 235 KYT--VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS-----TSWLQAGD 277 (864)
T ss_pred ccc--CchhhhHHHHHHHHHHHhcCchhhccHHHHhc-----cccccCCC
Confidence 542 24555667778889999999999999999998 78976543
No 72
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.6e-39 Score=341.12 Aligned_cols=251 Identities=24% Similarity=0.400 Sum_probs=195.2
Q ss_pred hcCCCCCceEcccCceEEEEEEe------cCCcEEEEEEeecCCcC--HHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH------VDGQVAAVKVLKCTNWS--EEEVLREVELLSSI-KHENIVRIIGYCHSKEM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 321 (549)
.++|...+.||+|+||.||++.. .++..||+|+++..... ...+.+|+.+++.+ +|+||++++++|...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 34788999999999999999864 22458999999754322 34578999999999 89999999999999999
Q ss_pred EEEEEecc-CCCHHHHHHH-------------------------------------------------------------
Q 008898 322 YAIVYNLL-NGSLKQYLKQ------------------------------------------------------------- 339 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~------------------------------------------------------------- 339 (549)
++++|||+ +|+|.+++..
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 99999999 7899998843
Q ss_pred ------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 340 ------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 340 ------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
+++.....++.||++||.|||++ +|+||||||+|||++++ +.++|+|||++........ ..
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~-~~~kL~DfGla~~~~~~~~---~~ 269 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDG-RVAKICDFGLARDIMNDSN---YV 269 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCC-CeEEEeeceeeeeccCCcc---ee
Confidence 34556788999999999999999 99999999999999988 6899999999865432111 11
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
......+++.|+|||++.+..++.++|||||||++|||++ |+.||............ ...+ ..+.....
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~-----~~~~-----~~~~~~~~ 339 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM-----VKRG-----YQMSRPDF 339 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH-----HHcc-----cCccCCCC
Confidence 1122345678999999998899999999999999999997 99999765433221111 1111 01111111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+..+.+++..||+.||.+|||+.+|++.|++
T Consensus 340 ----~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 340 ----APPEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred ----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 23467888899999999999999999998864
No 73
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.6e-39 Score=326.24 Aligned_cols=259 Identities=24% Similarity=0.346 Sum_probs=195.8
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcC---CCCCeeeEEEEEEc-----CC
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSI---KHENIVRIIGYCHS-----KE 320 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l---~h~nIv~l~~~~~~-----~~ 320 (549)
+|++.+.||+|+||.||++.+ .+|+.+|+|.++.... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 478889999999999999987 4689999999875321 224566787777665 79999999998854 34
Q ss_pred eEEEEEeccCCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 321 MYAIVYNLLNGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 321 ~~~lv~e~~~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
.++++||++.++|.+++.. +++.....++.|++.||.|||+. +|+||||||+|||++.+ +.+||+|||++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~-~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSG-GQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC-CCEEECccCccc
Confidence 6899999999999998864 67788899999999999999999 99999999999999988 689999999986
Q ss_pred ccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc--
Q 008898 396 VHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG-- 473 (549)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~-- 473 (549)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|++||....... .+...........
T Consensus 157 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~ 229 (288)
T cd07863 157 IYSCQ------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPED 229 (288)
T ss_pred cccCc------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChh
Confidence 54321 12234568999999999998899999999999999999999999997654322 1111111110000
Q ss_pred -ccc------cccCCccc---ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 474 -LCE------RLIDPQLN---EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 474 -~~~------~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
... ....+... ....+...+.+.+++..||..||.+|||+.+++. |+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~-----hp~f 288 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ-----HPFF 288 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc-----CCCC
Confidence 000 00000000 0111233456788999999999999999999998 8886
No 74
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4.6e-39 Score=318.96 Aligned_cols=247 Identities=24% Similarity=0.378 Sum_probs=199.4
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++|...+.||+|+||.||++...++..+|+|.++.......++.+|+.+++.++||||+++++++..++.++++|||+ +
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 357888899999999999998888889999998866666778999999999999999999999999999999999999 6
Q ss_pred CCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 331 GSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 331 gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
|+|.+++.. +++.....++.|++.||.|||++ +|+|+||||+||+++.+ +.++|+|||++.........
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~-~~~kl~d~g~~~~~~~~~~~--- 156 (256)
T cd05114 84 GCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSST-GVVKVSDFGMTRYVLDDEYT--- 156 (256)
T ss_pred CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCC-CeEEECCCCCccccCCCcee---
Confidence 899998853 57788899999999999999999 99999999999999988 68999999998654322111
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .+ ..+.... ....+.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~-~~----~~i~~~~---~~~~~~--- 224 (256)
T cd05114 157 -SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE-VV----EMISRGF---RLYRPK--- 224 (256)
T ss_pred -ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH-HH----HHHHCCC---CCCCCC---
Confidence 1112245678999999998899999999999999999999 899997654321 11 1111111 111111
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
.....+.+++.+||..+|.+||++.++++.|.
T Consensus 225 ----~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 ----LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ----CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12346788999999999999999999999763
No 75
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.4e-39 Score=330.52 Aligned_cols=250 Identities=20% Similarity=0.314 Sum_probs=197.1
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCC-CCeeeEEEEEEcCCeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKH-ENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h-~nIv~l~~~~~~~~~~~lv~ 326 (549)
+|...+.||+|+||.||+|.. .+++.+|+|+++... ...+.+..|..++..+.| ++|+++++++.+.+.++++|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 478889999999999999977 457899999997532 223457789999999976 56888999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.++|+|||++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~-~~~kL~Dfg~~~~~~~--- 153 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAE-GHIKIADFGMCKENIF--- 153 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCC-CCEEEeecCcceecCC---
Confidence 999 6799988854 67788889999999999999999 99999999999999998 6899999999853221
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||....... .. ..+... ...
T Consensus 154 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~---~~i~~~-------~~~ 219 (324)
T cd05587 154 --GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--LF---QSIMEH-------NVS 219 (324)
T ss_pred --CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HH---HHHHcC-------CCC
Confidence 1122335679999999999999999999999999999999999999997654321 11 111110 111
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhcCCchhhhhhhH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTM-----KTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~L~~~~~w~~~~~~ 532 (549)
++.. ....+.+++..||..||.+||+. .++++ |+||.....
T Consensus 220 ~~~~----~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~-----hp~~~~~~~ 265 (324)
T cd05587 220 YPKS----LSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE-----HAFFRRIDW 265 (324)
T ss_pred CCCC----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc-----CCCcCCCCH
Confidence 1122 23456788899999999999986 67766 788766543
No 76
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.5e-39 Score=331.88 Aligned_cols=264 Identities=25% Similarity=0.339 Sum_probs=202.8
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.++|+..+.||+|+||.||++.+ .++..+|+|++..... ....+.+|+++++.++||||++++++|.+++.++++||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 46899999999999999999987 4688999999875432 23568899999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+ +|+|.+++.. +.+.....++.|++.||.|||+.+ +|+|+||||+|||++.+ +.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~~--- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS--- 157 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCC-CCEEEeeCCcchhhhhh---
Confidence 99 6799999864 566777889999999999999742 79999999999999988 68999999998543221
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc-------
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE------- 476 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~------- 476 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...... ...+...
T Consensus 158 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~ 230 (333)
T cd06650 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL--ELMFGC-PVEGDPAESETSPR 230 (333)
T ss_pred ----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH--HHHhcC-cccCCccccccCcc
Confidence 12245789999999999988899999999999999999999999976543211 100000 0000000
Q ss_pred --------------------------cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 477 --------------------------RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 477 --------------------------~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
..................+.+++.+||..||.+|||+.++++ |+|++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~-----h~~~~~~ 305 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV-----HAFIKRS 305 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh-----CHHHhcC
Confidence 000000000000012345788999999999999999999998 8999776
Q ss_pred hH
Q 008898 531 RE 532 (549)
Q Consensus 531 ~~ 532 (549)
..
T Consensus 306 ~~ 307 (333)
T cd06650 306 EA 307 (333)
T ss_pred cc
Confidence 43
No 77
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.9e-39 Score=337.87 Aligned_cols=266 Identities=22% Similarity=0.271 Sum_probs=201.9
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC------C
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSK------E 320 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~ 320 (549)
.++|...+.||+|+||.||++.+ ..++.+|||++.... .....+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 46899999999999999999976 568899999997542 2235678899999999999999999987543 3
Q ss_pred eEEEEEeccCCCHHHHHHH-hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 321 MYAIVYNLLNGSLKQYLKQ-LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 321 ~~~lv~e~~~gsL~~~l~~-~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
.+++||||+.++|.+++.. +++.....++.|++.||.|||++ +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~-~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSD-CTLKILDFGLARTAGT 178 (364)
T ss_pred eEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCC-CcEEEEeCCCccccCC
Confidence 5799999999998887753 67778888999999999999999 99999999999999998 6899999999965432
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc--------
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS-------- 471 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~-------- 471 (549)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ +.........
T Consensus 179 ~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~ 251 (364)
T cd07875 179 S------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKK 251 (364)
T ss_pred C------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHh
Confidence 1 122345789999999999999999999999999999999999999976543211 1111110000
Q ss_pred ----------cc-cc-----ccccCCcc---cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 472 ----------SG-LC-----ERLIDPQL---NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 472 ----------~~-~~-----~~~~d~~l---~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
.. .. ..+..... ...........+.+++.+|+..||.+|||+.++++ |+|+.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~-----hp~~~~~~~ 326 (364)
T cd07875 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ-----HPYINVWYD 326 (364)
T ss_pred hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc-----CcccccccC
Confidence 00 00 00000000 00011112346788999999999999999999999 899865433
No 78
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.8e-39 Score=340.21 Aligned_cols=257 Identities=21% Similarity=0.299 Sum_probs=199.3
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
..++|+..+.||+|+||.||++.+ .+++.+|+|++.... .....+.+|+.+++.++||||+++++++.+++.+++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 357899999999999999999987 468899999996422 122447789999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
||||+ +|+|.+++.. ++......++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+|.......
T Consensus 121 v~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~-~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 121 VMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKH-GHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCC-CCEEEEecccceecccCC
Confidence 99999 7899999865 56667788999999999999999 99999999999999988 699999999986543211
Q ss_pred ccccCccccccccCCccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGK----VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
.......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... .. ..+..... .
T Consensus 197 ----~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-~~----~~i~~~~~--~ 265 (370)
T cd05621 197 ----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-TY----SKIMDHKN--S 265 (370)
T ss_pred ----ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-HH----HHHHhCCc--c
Confidence 11223567999999999987543 7889999999999999999999997654321 11 11111110 0
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhcCCchhhhhhh
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSR--RPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~~L~~~~~w~~~~~ 531 (549)
+ ..+. .......+.+++..|+..++.+ ||++.++++ |+||+...
T Consensus 266 ~---~~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~-----hp~~~~~~ 311 (370)
T cd05621 266 L---NFPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ-----HPFFKNDQ 311 (370)
T ss_pred c---CCCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhc-----CcccCCCC
Confidence 0 0111 1122445667778888765544 899999999 89997643
No 79
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.1e-39 Score=322.63 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=196.0
Q ss_pred EcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 260 IGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 260 lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
||+|+||+||++.+ .+|+.+|+|.+...... .+.+..|+.+++.++||||+++.+++..++.++++|||+ +|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999976 57899999998754322 245678999999999999999999999999999999999 6789
Q ss_pred HHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 334 KQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 334 ~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
..++.. +++.....++.||+.||.|||+. +|+||||||+||+++.+ +.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~----- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDND-GNVRISDLGLAVELKDGQ----- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC-CCEEEeeCccceecCCCC-----
Confidence 887732 66778889999999999999999 99999999999999988 689999999986543321
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ....... ... ..
T Consensus 152 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~---------~~~--~~ 219 (280)
T cd05608 152 SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-ELKQRIL---------NDS--VT 219 (280)
T ss_pred ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH-HHHHhhc---------ccC--CC
Confidence 12234578999999999999999999999999999999999999997654321111 1111111 000 11
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHH
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~ 533 (549)
++......+.+++..||+.||.+|| +++++++ |+||+.....
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~-----h~~~~~~~~~ 266 (280)
T cd05608 220 YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT-----HPLFRDLNWR 266 (280)
T ss_pred CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc-----ChhhhcCCHh
Confidence 1223445677888999999999999 7788888 8999875443
No 80
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-40 Score=325.05 Aligned_cols=271 Identities=22% Similarity=0.318 Sum_probs=208.9
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC---C--eEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSK---E--MYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~---~--~~~lv~ 326 (549)
.|...+++|.|+||.||.|.. .+++.+|||.+-.+. +.-.+|++||+.+.|||||+|.-+|... + .+.+||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~---r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK---RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC---CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 477788999999999999976 557999999886543 2334799999999999999998877432 1 456799
Q ss_pred eccCCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 327 NLLNGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 327 e~~~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
||+..+|.++++. ++...+.-+.+||.+||.|||+. +|+||||||.|+|+|.+.|.+||||||.|+....
T Consensus 102 eymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 102 EYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred HhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 9999999999974 44455667899999999999998 9999999999999999989999999999987544
Q ss_pred ccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc--c-
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL--C- 475 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~- 475 (549)
+........|..|.|||.+.+. .|+.+.||||.||++.||+-|++.|.+.. ..++++...+.+.-... +
T Consensus 179 ------~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 179 ------GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred ------CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHHHHhCCCCHHHHh
Confidence 2233455678899999998875 59999999999999999999999998855 44455555554432211 0
Q ss_pred ----c--cccCCccc-----ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHHHHhhcc
Q 008898 476 ----E--RLIDPQLN-----EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEELLNERR 541 (549)
Q Consensus 476 ----~--~~~d~~l~-----~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~~~~~~~ 541 (549)
. +...|.+. .-+........++++.+++..+|.+|.++.+++. |++|......+..++-++
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~-----h~fFdelr~~~~~l~~g~ 323 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA-----HPFFDELRDPNTKLPNGR 323 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc-----chhhHHhhCcCccCcCCC
Confidence 0 11112111 1123344566788889999999999999999998 888877766655444433
No 81
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.5e-39 Score=339.30 Aligned_cols=257 Identities=22% Similarity=0.282 Sum_probs=201.6
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
.++|...+.||+|+||.||++.+ .+++.+|+|+++... .....+.+|+.+++.++||||+++++++.+++.+++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 46799999999999999999987 568999999997532 1223467899999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
|||+ +|+|.+++.. ++......++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~-~~~kL~DfG~~~~~~~~~- 196 (370)
T cd05596 122 MEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMDANG- 196 (370)
T ss_pred EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCC-CCEEEEeccceeeccCCC-
Confidence 9999 7899999865 55667778899999999999999 99999999999999998 699999999986543211
Q ss_pred cccCccccccccCCccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYG----KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.......+||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ...+..... .+
T Consensus 197 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-----~~~i~~~~~--~~ 266 (370)
T cd05596 197 ---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-----YSKIMDHKN--SL 266 (370)
T ss_pred ---cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH-----HHHHHcCCC--cC
Confidence 1122356799999999998653 478999999999999999999999976543211 111111100 00
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhcCCchhhhhhhH
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSR--RPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
..+. .......+.+++..||..+|.+ ||++.++++ |+|++....
T Consensus 267 ---~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~-----h~~~~~~~~ 312 (370)
T cd05596 267 ---TFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS-----HPFFKNDQW 312 (370)
T ss_pred ---CCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc-----CcccCCCCh
Confidence 0111 1122456677889999999988 999999998 899877543
No 82
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.9e-39 Score=319.48 Aligned_cols=248 Identities=24% Similarity=0.387 Sum_probs=201.1
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++|+..+.||+|+||.||+|...++..+|+|.+.......+.+.+|+.+++.++|+||+++++++.+.+..+++|||+ +
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence 568889999999999999998878889999998766655678899999999999999999999999999999999998 7
Q ss_pred CCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 GSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
|+|.+++.. +++.....++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++.........
T Consensus 86 ~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~~~~-- 159 (261)
T cd05072 86 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSES-LMCKIADFGLARVIEDNEYT-- 159 (261)
T ss_pred CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCC-CcEEECCCccceecCCCcee--
Confidence 899999854 56677888999999999999999 99999999999999998 68999999999664332111
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
......++..|+|||++.++.++.++|||||||++|+|++ |..||....... .... +.. + ...+ .
T Consensus 160 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~---~~~-~----~~~~-~- 225 (261)
T cd05072 160 --AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSA---LQR-G----YRMP-R- 225 (261)
T ss_pred --ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHH---HHc-C----CCCC-C-
Confidence 1122345778999999998889999999999999999998 999997654322 1111 110 1 0001 1
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
....+..+.+++.+|+..+|++||+++++.+.|++
T Consensus 226 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 226 ---MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11233557888999999999999999999999875
No 83
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.4e-39 Score=332.05 Aligned_cols=251 Identities=19% Similarity=0.252 Sum_probs=193.9
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||++.. .+++.+|+|+++.... ....+.+|+.++.++ +||||+++++++..++.++++|||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3699999999999987 5688999999975421 224467888888776 7999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|..++.. +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++..... ...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~-~~~kL~DfG~~~~~~~-----~~~ 151 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLR-----PGD 151 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCC-CCEEEeeCCccccccC-----CCC
Confidence 789888753 67788889999999999999999 99999999999999998 6899999999854221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc---hhhHHHHHHHhhcccccccccCCccc
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN---RESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+......... ..++
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------~~~p 225 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------IRIP 225 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC------CCCC
Confidence 223567999999999999999999999999999999999999999632211 1111111111111111 1112
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHHhcCCchhhhhhhH
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPT------MKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs------~~evl~~L~~~~~w~~~~~~ 532 (549)
......+.+++..||..||.+||+ +.++++ |+||+....
T Consensus 226 ----~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~-----hp~f~~~~~ 270 (329)
T cd05618 226 ----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG-----HPFFRNVDW 270 (329)
T ss_pred ----CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc-----CCCCCCCCH
Confidence 222345678889999999999998 578876 899876543
No 84
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.9e-39 Score=322.78 Aligned_cols=249 Identities=24% Similarity=0.411 Sum_probs=198.1
Q ss_pred cCCCCCceEcccCceEEEEEEecC-C-----cEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVD-G-----QVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYA 323 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~-g-----~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 323 (549)
++|+..+.||+|+||.||+|.... + ..+|+|.++..... ...+.+|+.+++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468888999999999999997532 2 57999998754322 345789999999999999999999999889999
Q ss_pred EEEecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC
Q 008898 324 IVYNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF 383 (549)
Q Consensus 324 lv~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~ 383 (549)
++|||+ +|+|.+++.. +++...+.++.|++.||.|||+. +++|+||||+||+++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~- 160 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG- 160 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCC-
Confidence 999999 6899999854 45567788999999999999999 99999999999999998
Q ss_pred CceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhH
Q 008898 384 HHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESL 462 (549)
Q Consensus 384 ~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l 462 (549)
+.++|+|||++........ ........+++.|+|||.+.++.++.++|||||||++|||++ |..||......+ +
T Consensus 161 ~~~~L~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--~ 235 (283)
T cd05048 161 LTVKISDFGLSRDIYSADY---YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--V 235 (283)
T ss_pred CcEEECCCcceeecccccc---ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--H
Confidence 6899999999865432211 111223456889999999998899999999999999999998 999997654321 1
Q ss_pred HHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 463 VLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 463 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.. .+ ..+ .....+...+..+.+++.+||+.||.+||++.+|++.|+.
T Consensus 236 ~~---~i-~~~---------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 236 IE---MI-RSR---------QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH---HH-HcC---------CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 11 111 1111233455778899999999999999999999998864
No 85
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.7e-39 Score=330.85 Aligned_cols=252 Identities=21% Similarity=0.351 Sum_probs=198.2
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
+|...+.||+|+||.||++.+ .+++.+|+|+++.... ....+..|..++..+ +|++|+++++++.+.+.+++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 578889999999999999987 4578999999975421 223466788888777 5899999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. +++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~-~~~kL~DfG~~~~~~~--- 153 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSE-GHIKIADFGMCKENMW--- 153 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCC-CcEEEccCCCceecCC---
Confidence 999 6899988854 67788899999999999999999 99999999999999999 6899999999854321
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||....... +. ..+... ...
T Consensus 154 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~--~~---~~i~~~-------~~~ 219 (323)
T cd05616 154 --DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LF---QSIMEH-------NVA 219 (323)
T ss_pred --CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH--HH---HHHHhC-------CCC
Confidence 1122335679999999999999999999999999999999999999997654321 11 111110 011
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhcCCchhhhhhhHHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTM-----KTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~L~~~~~w~~~~~~~~ 534 (549)
++......+.+++..|++.||.+|++. .++++ |+||+......
T Consensus 220 ----~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~-----h~~~~~~~~~~ 267 (323)
T cd05616 220 ----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE-----HAFFRYIDWEK 267 (323)
T ss_pred ----CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc-----CCCcCCCCHHH
Confidence 122234457788899999999999985 66655 78887655443
No 86
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=323.94 Aligned_cols=270 Identities=24% Similarity=0.352 Sum_probs=206.2
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecC---CcCHHHHHHHHHHHhcCCCCCeeeEEEEEEc-----CCe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCT---NWSEEEVLREVELLSSIKHENIVRIIGYCHS-----KEM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-----~~~ 321 (549)
...|...+.||+|+||.|+.+.. .+|+.||+|.+... ....+...+|+.+|+.++|+||+.+++++.. -+.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 45566778899999999999976 67999999998622 2334678899999999999999999998854 458
Q ss_pred EEEEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 322 YAIVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
.|+|+|+|+.+|.+.++. ++......+++||+.||.|+|+. +|+||||||.|+|++.+ ..+||||||+|+...
T Consensus 101 vYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~-c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 101 VYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNAD-CDLKICDFGLARYLD 176 (359)
T ss_pred eEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccC-CCEEeccccceeecc
Confidence 999999999999999965 66777888999999999999999 99999999999999999 489999999998765
Q ss_pred cccccccCccccccccCCccccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCccc-chhhHHHHHHHhhcccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMM-YGKVDEKIDVYSYGVVLLELITGKEAIQTNKA-NRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~-~~~~l~~~~~~~~~~~~~~ 476 (549)
.. ......+..+-|..|.|||++. ...|+.++||||.|||+.|||+|++.|.+.+. .+-.+....-.......+.
T Consensus 177 ~~---~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 177 KF---FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred cc---CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence 43 2233335667899999999876 55799999999999999999999999987654 2222221111111111111
Q ss_pred ccc--------C--Cc-----ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 477 RLI--------D--PQ-----LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 477 ~~~--------d--~~-----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
.+- . |. +...++ .......+++.+||..||.+|+|++|.|+ |+++......
T Consensus 254 ~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~-----hPYl~~~hdp 319 (359)
T KOG0660|consen 254 KIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALA-----HPYLAPYHDP 319 (359)
T ss_pred HhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhc-----ChhhhhhcCC
Confidence 111 0 00 001111 22345677889999999999999999999 7776655433
No 87
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-38 Score=326.68 Aligned_cols=260 Identities=21% Similarity=0.290 Sum_probs=188.9
Q ss_pred CceEcccCceEEEEEEec---CCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEc--CCeEEEEEeccCC
Q 008898 257 KMLIGQGGNSKVYRTNHV---DGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHS--KEMYAIVYNLLNG 331 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~---~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~g 331 (549)
.+.||+|+||.||+|... +++.+|+|.++.... ...+.+|+.+++.++||||+++++++.. +..++++|||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 457999999999999764 467999999875432 3467889999999999999999998853 5678999999999
Q ss_pred CHHHHHH------------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEec---CCCceEEeeeccccc
Q 008898 332 SLKQYLK------------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSE---NFHHPQLSDFGAAMV 396 (549)
Q Consensus 332 sL~~~l~------------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~~kL~DFGla~~ 396 (549)
+|.+++. .++......++.||+.||.|||+. +|+||||||+|||++. ..+.+||+|||++..
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 9988874 256677888999999999999999 9999999999999942 225899999999976
Q ss_pred cccccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccch--------hhHHHHHH
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANR--------ESLVLWAR 467 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~--------~~l~~~~~ 467 (549)
...... .........||+.|+|||++.+. .++.++||||+||++|||++|++||....... ..+.....
T Consensus 162 ~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07868 162 FNSPLK--PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239 (317)
T ss_pred cCCCCc--cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence 543211 11122356789999999998874 58999999999999999999999997543211 11111000
Q ss_pred Hhhccc---------------ccccccC-----Ccccc---cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 468 SLLSSG---------------LCERLID-----PQLNE---EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 468 ~~~~~~---------------~~~~~~d-----~~l~~---~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
.+.... ....... ..+.. .........+.++++.||..||.+|||++|+++ |
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~-----h 314 (317)
T cd07868 240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ-----D 314 (317)
T ss_pred hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc-----C
Confidence 000000 0000000 00000 000001134678999999999999999999998 8
Q ss_pred hhh
Q 008898 525 YWL 527 (549)
Q Consensus 525 ~w~ 527 (549)
+||
T Consensus 315 p~f 317 (317)
T cd07868 315 PYF 317 (317)
T ss_pred CCC
Confidence 886
No 88
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.4e-39 Score=339.96 Aligned_cols=259 Identities=21% Similarity=0.278 Sum_probs=197.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|++.+.||+|+||.||++.. .+++.+|+|++.... .....+.+|+++++.++||||+++++.+.+++.++++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688999999999999999987 568999999996432 12345778999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. ++......++.||+.||.|||++ +|+||||||+|||++.+ +.++|+|||+|........
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~-~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCC-CCEEEEeCCCCcccccccc
Confidence 999 7899999865 45667778899999999999999 99999999999999988 6899999999743210000
Q ss_pred --------------------------------------cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHH
Q 008898 403 --------------------------------------VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLE 444 (549)
Q Consensus 403 --------------------------------------~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~e 444 (549)
..........+||+.|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 000011124579999999999999999999999999999999
Q ss_pred HHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCC---CHHHHHHHhc
Q 008898 445 LITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRP---TMKTLLKLFQ 521 (549)
Q Consensus 445 lltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP---s~~evl~~L~ 521 (549)
|++|+.||.......... .+.... .....+. ...++. .+.+++..|+ .+|.+|+ ++.++++
T Consensus 237 ll~G~~Pf~~~~~~~~~~-----~i~~~~--~~~~~~~-~~~~s~----~~~~li~~l~-~~p~~R~~~~t~~ell~--- 300 (376)
T cd05598 237 MLVGQPPFLADTPAETQL-----KVINWE--TTLHIPS-QAKLSR----EASDLILRLC-CGAEDRLGKNGADEIKA--- 300 (376)
T ss_pred hhhCCCCCCCCCHHHHHH-----HHhccC--ccccCCC-CCCCCH----HHHHHHHHHh-cCHhhcCCCCCHHHHhC---
Confidence 999999998765422111 111000 0000110 112233 3445556655 4999999 8999998
Q ss_pred CCchhhhhhhH
Q 008898 522 EPDYWLKMKRE 532 (549)
Q Consensus 522 ~~~~w~~~~~~ 532 (549)
|+||+....
T Consensus 301 --h~~~~~~~~ 309 (376)
T cd05598 301 --HPFFKGIDF 309 (376)
T ss_pred --CCCcCCCCH
Confidence 899876543
No 89
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.3e-39 Score=330.39 Aligned_cols=250 Identities=18% Similarity=0.256 Sum_probs=195.3
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||++.+ .+++.+|+|+++.... ....+.+|..++..+ +||||+++++++.+++.++++|||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999987 5689999999986432 123477899999988 7999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|.+++.. +++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++..... ...
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~-----~~~ 151 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAE-GHIKLTDYGMCKEGIR-----PGD 151 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCC-CCEEECcCcccccccc-----CCC
Confidence 789888843 77888899999999999999999 99999999999999998 6899999999853211 122
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc---hhhHHHHHHHhhcccccccccCCccc
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN---RESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+......... ..++
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------~~~p 225 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ------IRIP 225 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC------CCCC
Confidence 234568999999999999999999999999999999999999999642211 1111111111111111 1112
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHHhcCCchhhhhhh
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPT------MKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs------~~evl~~L~~~~~w~~~~~ 531 (549)
..+ ...+.+++..||..||.+||+ +.++++ |+||....
T Consensus 226 ~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~-----hp~~~~~~ 269 (329)
T cd05588 226 RSL----SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS-----HPFFRNID 269 (329)
T ss_pred CCC----CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc-----CCCCCCCC
Confidence 222 345677889999999999997 788887 89987644
No 90
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.8e-39 Score=329.83 Aligned_cols=246 Identities=22% Similarity=0.289 Sum_probs=195.2
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||++.. .+++.+|+|+++... .....+..|..++..+ +||||+++++++...+.+++||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999987 468999999997532 2234567888888876 6999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|.+++.. +++.....++.|++.||.|||++ +|+||||||+|||++.+ +.++|+|||++..... ...
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~-~~~kL~DfG~~~~~~~-----~~~ 151 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHE-GHCKLADFGMCKEGIF-----NGK 151 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCC-CcEEEeeCCCCeecCc-----CCC
Confidence 799988854 67788888999999999999999 99999999999999998 6899999999854221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... + ...+.... ...+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~---~~~i~~~~-------~~~~~~- 218 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD--L---FEAILNDE-------VVYPTW- 218 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--H---HHHHhcCC-------CCCCCC-
Confidence 2335679999999999998899999999999999999999999997654321 1 11111110 111112
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHhcCCchhhhhhhHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTM------KTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~------~evl~~L~~~~~w~~~~~~~ 533 (549)
....+.++++.||..||.+||++ +++++ |+||......
T Consensus 219 ---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~-----h~~f~~~~~~ 262 (320)
T cd05590 219 ---LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILR-----HPFFKELDWE 262 (320)
T ss_pred ---CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHc-----CCCcCCCCHH
Confidence 23456788899999999999998 77776 8998765443
No 91
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-38 Score=322.14 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=202.5
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
+|+..++||+|+||.||++.. .+++.+|+|++...... ...+.+|+.+++.++||||+++++.+.+++.++++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 377889999999999999976 56899999999754321 2346789999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 328 LL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 328 ~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
|+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+||+++++ +.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDY-GHIRISDLGLAVEIPEG- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCC-CCEEEeeCCCceecCCC-
Confidence 99 6789888732 66778888999999999999999 99999999999999988 68999999998654321
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...+. .
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~~~~~~~~-~--------- 219 (285)
T cd05605 156 -----ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KREEVERRVK-E--------- 219 (285)
T ss_pred -----CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHHHHHHHhh-h---------
Confidence 11224578999999999998899999999999999999999999998654321 1111111110 0
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHH
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~ 533 (549)
....++......+.+++..||..||.+|| ++.++++ |+||......
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~-----~~~~~~~~~~ 270 (285)
T cd05605 220 -DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA-----HPFFRTANFK 270 (285)
T ss_pred -cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc-----CcCccCCCHH
Confidence 00112233455678899999999999999 8999998 8999875544
No 92
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=9.9e-39 Score=317.47 Aligned_cols=249 Identities=25% Similarity=0.374 Sum_probs=202.2
Q ss_pred hcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
.++|+..+.||+|+||.||++...+++.+|+|.++......+++.+|+.++++++||||+++++++...+.++++||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 3568889999999999999998877888999999876666678999999999999999999999999999999999999
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+++|.+++.. +++.....++.|++.||.|||+. +|+|+||||+||+++++ +.++|+|||++.........
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGEN-NICKVADFGLARVIKEDIYE- 159 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCC-CCEEECCcceEEEccCCccc-
Confidence 7899999854 66888899999999999999999 99999999999999998 68999999998765421111
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
......++..|+|||++.+..++.++||||||+++|||++ |+.||....... .+. .... .. .
T Consensus 160 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~----~~~~-~~-----~--- 222 (261)
T cd05068 160 ---AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-VLQ----QVDQ-GY-----R--- 222 (261)
T ss_pred ---ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHH----HHHc-CC-----C---
Confidence 1111223457999999998899999999999999999999 999997654221 111 1111 00 0
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..........+.+++.+|++.+|.+||++.++++.|+.
T Consensus 223 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 -MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 01122334668889999999999999999999999875
No 93
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-38 Score=333.11 Aligned_cols=259 Identities=21% Similarity=0.294 Sum_probs=194.1
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
..+|.+.+.||+|+||.||+|.. .+++.+|+|+.... ....|+.+++.++||||+++++++...+..+++++++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 35799999999999999999987 45789999975432 3456999999999999999999999999999999999
Q ss_pred CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 ~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
.|+|.+++.. +++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.++|+|||++.....
T Consensus 140 ~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~------ 209 (357)
T PHA03209 140 SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDV-DQVCIGDLGAAQFPVV------ 209 (357)
T ss_pred CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC-CCEEEecCcccccccc------
Confidence 9999998853 67888899999999999999999 99999999999999998 6899999999864221
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcc-cchh-hH----HHHHHHhhccccc-ccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNK-ANRE-SL----VLWARSLLSSGLC-ERL 478 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~-~~~~-~l----~~~~~~~~~~~~~-~~~ 478 (549)
........||+.|+|||++.+..++.++|||||||++|||+++..|+.... .... .. ..+.......+.. ..+
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (357)
T PHA03209 210 APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEF 289 (357)
T ss_pred CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhc
Confidence 112234579999999999999999999999999999999998665553221 1111 00 0111100000000 000
Q ss_pred ------------cCC--cccccC-------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 479 ------------IDP--QLNEEY-------NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 479 ------------~d~--~l~~~~-------~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
.+. .....+ .........+++..||+.||.+|||+.|+++ |+||++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~-----hp~f~~ 356 (357)
T PHA03209 290 PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN-----YPMFAQ 356 (357)
T ss_pred CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc-----Cchhcc
Confidence 000 000000 0011234456899999999999999999999 899975
No 94
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.1e-38 Score=327.18 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=194.3
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhc-CCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSS-IKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~-l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+.||+|+||.||+|.+ .+++.+|+|+++... ........|..++.. ++||||+++++++.+++.++++|||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 3699999999999987 458899999997542 223456678888875 58999999999999999999999999 7
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+|||++.+ +.++|+|||++..... ...
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~-~~~kl~Dfg~~~~~~~-----~~~ 151 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTD-GHIKIADFGMCKENML-----GDA 151 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCC-CCEEEccCCcceECCC-----CCC
Confidence 899999864 67788889999999999999999 99999999999999998 6899999999854221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... +. ..+.. ..+..+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~~---~~i~~-------~~~~~~~~- 218 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--LF---QSIRM-------DNPCYPRW- 218 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--HH---HHHHh-------CCCCCCcc-
Confidence 2235679999999999999999999999999999999999999997654221 11 11110 01111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHhcCCchhhhhhhHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMK-TLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~-evl~~L~~~~~w~~~~~~~ 533 (549)
....+.+++..||..||.+||++. ++++ |+||+.....
T Consensus 219 ---~~~~~~~li~~~l~~~P~~R~~~~~~l~~-----h~~~~~~~~~ 257 (316)
T cd05619 219 ---LTREAKDILVKLFVREPERRLGVKGDIRQ-----HPFFREIDWS 257 (316)
T ss_pred ---CCHHHHHHHHHHhccCHhhcCCChHHHHc-----CcccCCCCHH
Confidence 234567788999999999999997 6766 7888776543
No 95
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=9.9e-39 Score=327.54 Aligned_cols=245 Identities=22% Similarity=0.307 Sum_probs=191.7
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhc-CCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSS-IKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~-l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||+|.+ .+++.||+|+++... ...+.+..|..++.. .+||||+++++++..++.+++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999987 458899999997542 122345667777764 48999999999999999999999999 7
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|.+++.. ++......++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++...... ..
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~-~~~kL~Dfg~a~~~~~~-----~~ 151 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKD-GHIKIADFGMCKENMNG-----EG 151 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCC-CCEEEccCcCCeECCCC-----CC
Confidence 799988854 66778888999999999999999 99999999999999998 68999999998643221 12
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+ ..+... .+.++.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-~~----~~i~~~-------~~~~~~-- 217 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-LF----DSILND-------RPHFPR-- 217 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-HH----HHHHcC-------CCCCCC--
Confidence 2335679999999999999999999999999999999999999997654321 11 111110 111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHhcCCchhhhhhhH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMK-TLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~-evl~~L~~~~~w~~~~~~ 532 (549)
.....+.+++..||..||.+||++. ++++ |+|++....
T Consensus 218 --~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~-----h~~~~~~~~ 256 (316)
T cd05592 218 --WISKEAKDCLSKLFERDPTKRLGVDGDIRQ-----HPFFRGIDW 256 (316)
T ss_pred --CCCHHHHHHHHHHccCCHHHcCCChHHHHc-----CcccCCCCH
Confidence 2234567788999999999999875 5655 788876543
No 96
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=6.7e-39 Score=322.72 Aligned_cols=266 Identities=24% Similarity=0.344 Sum_probs=198.3
Q ss_pred CC-CCCceEcccCceEEEEEEe-----cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEc--CCeE
Q 008898 253 NF-SPKMLIGQGGNSKVYRTNH-----VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHS--KEMY 322 (549)
Q Consensus 253 ~f-~~~~~lG~G~fg~Vy~~~~-----~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~ 322 (549)
+| ...+.||+|+||+||++.. .+++.+|+|+++.... ....+.+|+++++.++||||+++++++.. ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 7888999999999988642 4578999999976532 34567899999999999999999998865 3468
Q ss_pred EEEEecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
+++|||+ +|+|.+++.. +++..+..++.|++.||.|||++ +|+||||||+|||++++ +.++|+|||++.....
T Consensus 84 ~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDND-RLVKIGDFGLAKAVPE 159 (283)
T ss_pred EEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCC-CcEEEeecccccccCC
Confidence 8999999 6789999864 78888999999999999999999 99999999999999988 6899999999865443
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
..... .......++..|+|||.+.+..++.++|||||||++|||++|..|+............+..............
T Consensus 160 ~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 160 GHEYY--RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred cchhh--ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 21110 0111234566799999998888999999999999999999999998654322111111110000001111111
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
+.......+...+..+.+++..||+.+|.+|||++++++.|+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111223334567888999999999999999999999887543
No 97
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.7e-39 Score=331.29 Aligned_cols=246 Identities=22% Similarity=0.282 Sum_probs=194.9
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||+|.+ .+++.+|+|+++... .....+..|.+++..+ +||||+++++++..++.+++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3699999999999987 458899999997542 2224567888888865 7999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|..++.. +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.++|+|||++..... ...
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~-~~~kL~Dfg~~~~~~~-----~~~ 151 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAE-GHCKLADFGMCKEGIL-----NGV 151 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCC-CCEEEeecccceeccc-----CCc
Confidence 789888854 67778888999999999999999 99999999999999998 6899999999854321 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+ ..+.... ...+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-~~----~~i~~~~-------~~~p~~- 218 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-LF----ESILHDD-------VLYPVW- 218 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-HH----HHHHcCC-------CCCCCC-
Confidence 2335679999999999999899999999999999999999999998654321 11 1111111 111111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHHhcCCchhhhhhhHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRP-------TMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RP-------s~~evl~~L~~~~~w~~~~~~~ 533 (549)
....+.+++..||..||.+|| ++.++++ |+||......
T Consensus 219 ---~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~-----hp~~~~~~~~ 263 (321)
T cd05591 219 ---LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ-----HPFFKEIDWV 263 (321)
T ss_pred ---CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc-----CCccCCCCHH
Confidence 234567788999999999999 8888987 8898765443
No 98
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.3e-39 Score=326.61 Aligned_cols=265 Identities=22% Similarity=0.343 Sum_probs=201.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|...+.||+|+||.||+|.. .+++.+|+|.++.... ....+.+|+.+++.++||||+++++++..++.++++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 5688999999999999999976 4688999999875432 234577899999999999999999999999999999999
Q ss_pred cCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+.++|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++......
T Consensus 86 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~---- 157 (309)
T cd07872 86 LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINER-GELKLADFGLARAKSVP---- 157 (309)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC-CCEEECccccceecCCC----
Confidence 99999998854 56777888999999999999999 99999999999999998 68999999998643221
Q ss_pred cCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--c--------
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--G-------- 473 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~-------- 473 (549)
........+|+.|+|||.+.+ ..++.++|||||||++|+|++|++||......+. +.......... .
T Consensus 158 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 158 -TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred -ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhhcch
Confidence 111223467999999998865 4589999999999999999999999976654222 11111100000 0
Q ss_pred -ccccccCCcccc----cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 474 -LCERLIDPQLNE----EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 474 -~~~~~~d~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
.....-.+.... .........+.+++..||..||.+|||+.|+++ |+||+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~-----h~~~~~~~ 293 (309)
T cd07872 236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK-----HAYFRSLG 293 (309)
T ss_pred hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc-----Chhhhhcc
Confidence 000000000000 001122345678999999999999999999998 89997654
No 99
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8.6e-39 Score=327.99 Aligned_cols=246 Identities=22% Similarity=0.280 Sum_probs=193.5
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhc-CCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSS-IKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~-l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||++.+ .+|+.+|+|+++... ........|..++.. ++||||+++++++.+++.+++||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999987 468999999997542 223456678888875 48999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|..++.. +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.++|+|||++..... ...
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~-~~~kl~Dfg~~~~~~~-----~~~ 151 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRD-GHIKIADFGMCKENVF-----GDN 151 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCC-CCEEeCccCCCeeccc-----CCC
Confidence 799988854 67778888999999999999999 99999999999999998 6899999999853221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... + ...+.. ..+.+...+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~--~---~~~~~~-------~~~~~~~~~ 219 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE--L---FESIRV-------DTPHYPRWI 219 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--H---HHHHHh-------CCCCCCCCC
Confidence 2345679999999999999999999999999999999999999997654321 1 111110 111222222
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHhcCCchhhhhhhHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMK-TLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~-evl~~L~~~~~w~~~~~~~ 533 (549)
...+.+++..||..||.+||++. ++++ |+||......
T Consensus 220 ----~~~~~~li~~~l~~dP~~R~~~~~~~~~-----h~~f~~~~~~ 257 (316)
T cd05620 220 ----TKESKDILEKLFERDPTRRLGVVGNIRG-----HPFFKTINWT 257 (316)
T ss_pred ----CHHHHHHHHHHccCCHHHcCCChHHHHc-----CCCcCCCCHH
Confidence 34567788999999999999984 6666 7888775543
No 100
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8e-39 Score=328.46 Aligned_cols=246 Identities=22% Similarity=0.315 Sum_probs=196.8
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||++.+ .+++.+|+|+++... .....+..|..+++.+ +||||+++++++...+.++++|||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999987 458899999998542 2234567888999887 6999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|..++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++..... ...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~-----~~~ 151 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSE-GHIKIADFGMCKEGIL-----GGV 151 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCC-CcEEecccCCCeecCc-----CCC
Confidence 789888853 67888899999999999999999 99999999999999998 6899999999854211 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||....... . ...+... ....
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~--~---~~~i~~~-------~~~~---- 215 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE--L---FQSILED-------EVRY---- 215 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH--H---HHHHHcC-------CCCC----
Confidence 2234579999999999999999999999999999999999999997554221 1 1111111 0111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhcCCchhhhhhhHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTM-----KTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~L~~~~~w~~~~~~~ 533 (549)
+......+.+++..||..||.+||++ .++++ |+|++.....
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~-----~~~~~~~~~~ 261 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG-----HPFFREIDWD 261 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc-----CCCcCCCCHH
Confidence 12234567888999999999999999 99988 8999776543
No 101
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7.1e-39 Score=335.99 Aligned_cols=264 Identities=23% Similarity=0.325 Sum_probs=200.8
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC-----eEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKE-----MYA 323 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~~ 323 (549)
+|++.+.||+|+||.||++.. .+|+.||+|.+..... ....+.+|+.+++.++||||+++++++...+ .++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999986 5799999999864322 2356789999999999999999999998776 789
Q ss_pred EEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 324 IVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 324 lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+++||+.++|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++......
T Consensus 81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~-~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSN-CVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCC-CCEEeccccceeecccC
Confidence 9999999999888843 67888899999999999999999 99999999999999998 68999999998654321
Q ss_pred cccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc-------
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS------- 472 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~------- 472 (549)
. ........+|+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+..........
T Consensus 157 ~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 157 E----SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred c----cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHH
Confidence 1 1122234688999999998874 47999999999999999999999997655321 111111100000
Q ss_pred ---cc----cccccCCc-cc--ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 473 ---GL----CERLIDPQ-LN--EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 473 ---~~----~~~~~d~~-l~--~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
+. ......+. .. ........+.+.+++..||..||.+|||+.++++ |+|+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~-----hp~~~~~ 294 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA-----HPYLDEG 294 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc-----CHhhCCC
Confidence 00 00000000 00 0011122456788999999999999999999998 8998764
No 102
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1e-38 Score=318.82 Aligned_cols=249 Identities=18% Similarity=0.318 Sum_probs=196.5
Q ss_pred hcCCCCCceEcccCceEEEEEEec----CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV----DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
.++|++.+.||+|+||.||+|.+. .+..+|+|.++..... ...+.+|+.+++.++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888999999999999999652 3568999998765322 2467899999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
||||+ +|+|.+++.. +++...+.++.||+.||.|||+. +++||||||+|||++.+ +.++++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~-~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSD-LVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCC-CcEEECCCcccccccc
Confidence 99999 6789999854 57888899999999999999999 99999999999999998 6899999998644221
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.. ........++..|+|||.+.++.++.++|||||||++|||++ |..||....... . ...+. .+.
T Consensus 160 ~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~---~~~~~-~~~---- 225 (266)
T cd05064 160 EA----IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--V---IKAVE-DGF---- 225 (266)
T ss_pred cc----hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--H---HHHHH-CCC----
Confidence 11 011112345678999999999999999999999999999775 999997654321 1 11111 110
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. ...+...+..+.+++..||+.+|.+||++.+|++.|.+
T Consensus 226 -~----~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 226 -R----LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred -C----CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 0 11123345668889999999999999999999998754
No 103
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.5e-39 Score=333.72 Aligned_cols=255 Identities=22% Similarity=0.286 Sum_probs=200.4
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...+.||+|+||.||++.. .+|+.+|+|+++.... ....+.+|+.+++.++||||+++++++.+++.+++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688899999999999999977 5689999999985432 2345778999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 327 NLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 327 e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
||+ +|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~-~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRT-GHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCC-CCEEeccCCCCeECCCCC
Confidence 999 7899999854 56777888999999999999999 99999999999999998 789999999986543321
Q ss_pred ccccCccccccccCCccccccccc------cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccc
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMM------YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLC 475 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 475 (549)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...+......
T Consensus 157 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-----~~~i~~~~~~ 227 (330)
T cd05601 157 M----VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT-----YNNIMNFQRF 227 (330)
T ss_pred c----eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH-----HHHHHcCCCc
Confidence 1 1222457999999999987 45678999999999999999999999976543221 1111111110
Q ss_pred ccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 476 ERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 476 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
... + . .......+.+++..|+. +|.+|||+.++++ |+||.....
T Consensus 228 ~~~--~---~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~-----h~~~~~~~~ 271 (330)
T cd05601 228 LKF--P---E--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC-----HPFFSKIDW 271 (330)
T ss_pred cCC--C---C--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC-----CCCcCCCCH
Confidence 011 0 0 11123456778889997 9999999999998 899876443
No 104
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.4e-39 Score=337.52 Aligned_cols=258 Identities=21% Similarity=0.299 Sum_probs=196.7
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...+.||+|+||.||++.. .+|+.+|||++..... ....+.+|+++++.++||||+++++++.+++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999999976 5789999999865321 2245778999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+|||++.+ +.++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~-~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRG-GHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCC-CCEEEeecccccccccccc
Confidence 999 7899999854 56777788999999999999999 99999999999999988 7899999999853211000
Q ss_pred c-----------cc-------------------------------CccccccccCCccccccccccCCCCchhhHHHHHH
Q 008898 403 V-----------SE-------------------------------NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGV 440 (549)
Q Consensus 403 ~-----------~~-------------------------------~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGv 440 (549)
. .. .......+||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 00 00011357999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHH
Q 008898 441 VLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRR---PTMKTLL 517 (549)
Q Consensus 441 il~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R---Ps~~evl 517 (549)
++|||++|..||....... .+. .+.... ..+.-+ .. ......+.+++..|+. +|.+| +++.+++
T Consensus 237 il~elltG~~Pf~~~~~~~-~~~----~i~~~~--~~~~~p---~~--~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 237 IMFECLIGWPPFCSENSHE-TYR----KIINWR--ETLYFP---DD--IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred hhhhhhcCCCCCCCCCHHH-HHH----HHHccC--CccCCC---CC--CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 9999999999997654321 111 111100 001001 10 0122446677888987 66664 6999999
Q ss_pred HHhcCCchhhhhhh
Q 008898 518 KLFQEPDYWLKMKR 531 (549)
Q Consensus 518 ~~L~~~~~w~~~~~ 531 (549)
+ |+||+...
T Consensus 304 ~-----hp~~~~~~ 312 (377)
T cd05629 304 S-----HPFFRGVD 312 (377)
T ss_pred c-----CCCcCCCC
Confidence 8 89997654
No 105
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-38 Score=340.05 Aligned_cols=262 Identities=21% Similarity=0.267 Sum_probs=198.4
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
...|.+.+.||+|+||.||++.+ .+++.||||.... ..+.+|+.+|++++|+||+++++++..++..+++|+++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence 45799999999999999999987 4588999996432 34678999999999999999999999999999999999
Q ss_pred CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 ~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
.|+|.+++.. +++..++.++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++....... .
T Consensus 243 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~-~~vkL~DFGla~~~~~~~---~ 315 (461)
T PHA03211 243 RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGP-EDICLGDFGAACFARGSW---S 315 (461)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCC-CCEEEcccCCceeccccc---c
Confidence 9999998853 67889999999999999999999 99999999999999988 689999999987543321 1
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc------hhhHHHHHHHhhc-ccccccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN------RESLVLWARSLLS-SGLCERL 478 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~------~~~l~~~~~~~~~-~~~~~~~ 478 (549)
........||+.|+|||++.+..++.++|||||||+||||++|..|+...... ...+......... .......
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 11123467999999999999999999999999999999999988765432211 1111111111000 0000000
Q ss_pred ----------------cCCcccc-cCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 479 ----------------IDPQLNE-EYN--REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 479 ----------------~d~~l~~-~~~--~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
..+.... .+. ......+.+++.+||+.||.+|||+.|+++ |+||..
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~-----hp~f~~ 460 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR-----LPLFQS 460 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh-----CcccCC
Confidence 0000000 000 011235778999999999999999999999 899965
No 106
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4e-39 Score=333.92 Aligned_cols=266 Identities=23% Similarity=0.323 Sum_probs=200.9
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC------
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSK------ 319 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 319 (549)
+.++|...+.||+|+||.||++.. .+++.||||.+..... ....+.+|+.+++.++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 457899999999999999999976 5688999999875432 234577899999999999999999887533
Q ss_pred CeEEEEEeccCCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 320 EMYAIVYNLLNGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 320 ~~~~lv~e~~~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
..+++++++++++|.++++. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++...
T Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~-~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNED-CELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCC-CCEEEcCCccceec
Confidence 45789999999999988853 78888899999999999999999 99999999999999998 68999999998653
Q ss_pred ccccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc----
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS---- 472 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~---- 472 (549)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+ .+..+.......
T Consensus 169 ~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 169 DD--------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVVGTPSPEV 239 (343)
T ss_pred CC--------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCCHHH
Confidence 32 1234578999999999876 468999999999999999999999997644221 111111110000
Q ss_pred ------cccccccC--Cccccc----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 473 ------GLCERLID--PQLNEE----YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 473 ------~~~~~~~d--~~l~~~----~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
........ +..... ........+.+++..|+..||.+|||+.++++ |+||.....+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~-----hp~~~~~~~~ 307 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA-----HPYFSQYHDP 307 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc-----CcchhccCCC
Confidence 00000000 000000 00011234678999999999999999999998 8999765443
No 107
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-38 Score=336.31 Aligned_cols=263 Identities=22% Similarity=0.285 Sum_probs=202.0
Q ss_pred hcCCCCCceEcccCceEEEEEEec---CCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV---DGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~---~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
..+|.+.+.||+|+||.||++... .++.+|+|.+... ....+|+.+++.++||||+++++++.....++++|+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 457999999999999999999653 3678999988643 345689999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 328 LLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 328 ~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
++.++|.+++.. +++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++.......
T Consensus 167 ~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~-~~~~l~DfG~a~~~~~~~--- 239 (392)
T PHA03207 167 KYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEP-ENAVLGDFGAACKLDAHP--- 239 (392)
T ss_pred hcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCC-CCEEEccCccccccCccc---
Confidence 999999998853 68888999999999999999999 99999999999999998 689999999986543321
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc--hhhHHHHHHHhhccc-cc------
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN--RESLVLWARSLLSSG-LC------ 475 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~--~~~l~~~~~~~~~~~-~~------ 475 (549)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+......+.... ..
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 112223567999999999999999999999999999999999999999765432 111211111110000 00
Q ss_pred ------ccccCCcccccCC-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 476 ------ERLIDPQLNEEYN-------REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 476 ------~~~~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
..+ .......+. ......+.+++++||..||++|||+.+++. |+||+..
T Consensus 320 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~-----~p~f~~~ 381 (392)
T PHA03207 320 NLCKHFKQY-AIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS-----LPLFTKE 381 (392)
T ss_pred hHHHHHHhh-cccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh-----Cchhhcc
Confidence 000 000000000 012345677889999999999999999999 8999653
No 108
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2e-38 Score=343.31 Aligned_cols=249 Identities=23% Similarity=0.296 Sum_probs=197.2
Q ss_pred CCCCCceEcccCceEEEEEEe-cC-CcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VD-GQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~-g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
.|...+.||+|+||.||++.. .+ +..+|+|.+...... ...+.+|+.+++.++||||+++++++..++.+++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 488889999999999999976 44 678888877554332 235678999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 330 -NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 330 -~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+|+|.+++.+ +++.+...++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~-~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPT-GIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCC-CcEEEEeCcCceecCCcc
Confidence 7899988753 56677888999999999999999 99999999999999988 689999999997644321
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... + ....... . .++
T Consensus 224 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~--~---~~~~~~~-~----~~~ 290 (478)
T PTZ00267 224 S---LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE--I---MQQVLYG-K----YDP 290 (478)
T ss_pred c---cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--H---HHHHHhC-C----CCC
Confidence 1 112335679999999999999999999999999999999999999997543211 1 1111111 0 011
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
++......+.+++..||..||.+||++.+++. ++|++
T Consensus 291 -----~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~-----~~~~~ 327 (478)
T PTZ00267 291 -----FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH-----TEFLK 327 (478)
T ss_pred -----CCccCCHHHHHHHHHHhccChhhCcCHHHHHh-----CHHHH
Confidence 11123345788889999999999999999987 55554
No 109
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=345.92 Aligned_cols=249 Identities=28% Similarity=0.330 Sum_probs=197.0
Q ss_pred HhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCH---HHHHHHHHHHhcCCCCCeeeEEEEEEcCC---
Q 008898 248 CHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSE---EEVLREVELLSSIKHENIVRIIGYCHSKE--- 320 (549)
Q Consensus 248 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~--- 320 (549)
....++|.+.+.||+|+||.||++.. .+|+.||||++....... ..+.+|+.++..++|+||++++..+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457899999999999999999976 579999999997654332 45678999999999999999987764322
Q ss_pred -----eEEEEEecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceE
Q 008898 321 -----MYAIVYNLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQ 387 (549)
Q Consensus 321 -----~~~lv~e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~k 387 (549)
.++++|||+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+|||++.+ +.+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~-~~vk 183 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSN-GLVK 183 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCC-CCEE
Confidence 478999999 7899998853 56677888999999999999999 99999999999999998 6899
Q ss_pred EeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHH
Q 008898 388 LSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWAR 467 (549)
Q Consensus 388 L~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~ 467 (549)
|+|||+++...... ........+||+.|+|||++.+..++.++|||||||++|||++|+.||....... +..
T Consensus 184 L~DFGls~~~~~~~---~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~-----~~~ 255 (496)
T PTZ00283 184 LGDFGFSKMYAATV---SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE-----VMH 255 (496)
T ss_pred EEecccCeeccccc---cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-----HHH
Confidence 99999986543321 1122335689999999999999999999999999999999999999997643211 111
Q ss_pred HhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 468 SLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
..... ..++ .+......+.+++..||..||.+||++.++++
T Consensus 256 ~~~~~-----~~~~-----~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 256 KTLAG-----RYDP-----LPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHhcC-----CCCC-----CCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 11111 1111 12223456788899999999999999999997
No 110
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.1e-39 Score=328.70 Aligned_cols=247 Identities=26% Similarity=0.330 Sum_probs=192.7
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHH-HHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVE-LLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+.||+|+||.||++.+ .+|+.+|+|++..... ....+..|.. +++.++||||+++++++.+++.++++|||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 3699999999999987 5799999999975321 1234555555 567899999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|..++.. +.+.....++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++..... ...
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~-~~~kl~Dfg~~~~~~~-----~~~ 151 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQ-GHVVLTDFGLCKEGIE-----HSK 151 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCC-CcEEEeccCCCccccc-----CCC
Confidence 789988854 66777888999999999999999 99999999999999998 6899999999854221 122
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||....... ....+.... ..+...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-----~~~~i~~~~-------~~~~~~- 218 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE-----MYDNILNKP-------LRLKPN- 218 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH-----HHHHHHcCC-------CCCCCC-
Confidence 2335679999999999999999999999999999999999999997654321 111111110 111112
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHH----HHHHHhcCCchhhhhhhHHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMK----TLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~----evl~~L~~~~~w~~~~~~~~ 534 (549)
....+.+++..||+.||.+||++. ++++ |+||.......
T Consensus 219 ---~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~-----~~~~~~~~~~~ 261 (323)
T cd05575 219 ---ISVSARHLLEGLLQKDRTKRLGAKDDFLEIKN-----HVFFSSINWDD 261 (323)
T ss_pred ---CCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHc-----CCCcCCCCHHH
Confidence 244577888999999999999984 6665 78887655443
No 111
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.9e-38 Score=315.99 Aligned_cols=248 Identities=27% Similarity=0.417 Sum_probs=199.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
.+|...+.||+|+||.||+|.. .+++.+|+|.++.+.....++.+|+++++.++||||+++++++..++.++++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 3578888999999999999976 45889999999866655677899999999999999999999999999999999998
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+|+|.+++.. +++..++.++.|+++||.|||++ +++||||||+||+++++ +.++|+|||++.........
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~-~~~kl~df~~~~~~~~~~~~- 160 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN-HLVKVADFGLSRLMTGDTYT- 160 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCC-CcEEeCCCccccccccceee-
Confidence 6899999853 66778889999999999999999 99999999999999988 68999999998654332111
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
......+++.|+|||.+.+..++.++|||||||++|||++ |..||....... + ...+.. + ..+.
T Consensus 161 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~---~~~~~~-~-----~~~~- 225 (263)
T cd05052 161 ---AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V---YELLEK-G-----YRME- 225 (263)
T ss_pred ---ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--H---HHHHHC-C-----CCCC-
Confidence 1112234668999999999999999999999999999998 899987543221 1 111111 1 1111
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+...+..+.+++.+||..||.+|||+.++++.|+.
T Consensus 226 ---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 226 ---RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred ---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 122234568888999999999999999999998864
No 112
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.5e-38 Score=313.31 Aligned_cols=251 Identities=33% Similarity=0.522 Sum_probs=199.0
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHH---HHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEE---VLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~---~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
|+..+.||+|+||.||++.. .+++.+|+|++......... ..+|+.++++++||||+++++++...+.++++|+++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 45678999999999999988 45779999999877644433 356999999999999999999999999999999999
Q ss_pred CC-CHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 NG-SLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 ~g-sL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
.+ +|.+++.. +++..+..++.||++||.|||+. +|+|+||||+||+++.+ +.++|+|||.+.... ..
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~-~~~~l~Dfg~~~~~~-----~~ 151 (260)
T PF00069_consen 81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDEN-GEVKLIDFGSSVKLS-----EN 151 (260)
T ss_dssp TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTT-SEEEESSGTTTEEST-----ST
T ss_pred ccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc-ccccccccccccccc-----cc
Confidence 66 99999963 77888999999999999999999 99999999999999987 689999999986431 11
Q ss_pred CccccccccCCccccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMM-YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
........+|+.|+|||++. +..++.++||||||+++|+|++|..||...... ...................
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~------ 224 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-DQLEIIEKILKRPLPSSSQ------ 224 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-HHHHHHHHHHHTHHHHHTT------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccch-hhhhhhhhccccccccccc------
Confidence 22333567899999999998 788999999999999999999999999876221 1111111111111000000
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
........+.+++..||..||.+||++.++++ |+||
T Consensus 225 --~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~-----~~~~ 260 (260)
T PF00069_consen 225 --QSREKSEELRDLIKKMLSKDPEQRPSAEELLK-----HPWF 260 (260)
T ss_dssp --SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT-----SGGG
T ss_pred --ccchhHHHHHHHHHHHccCChhHCcCHHHHhc-----CCCC
Confidence 00001267888999999999999999999999 8986
No 113
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-40 Score=305.79 Aligned_cols=258 Identities=25% Similarity=0.352 Sum_probs=200.5
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC-cCHHHHHHHHHHHhcCCCCCeeeEEEEEEc-----CCeEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN-WSEEEVLREVELLSSIKHENIVRIIGYCHS-----KEMYA 323 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-----~~~~~ 323 (549)
.++|++.+.||+|||+.||++++ .++..||+|.+.+.. .+.+..++|++..++++|||++++++++.. ....|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 46799999999999999999986 679999999998776 455778999999999999999999987633 33588
Q ss_pred EEEecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 324 IVYNLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 324 lv~e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
++++|. .|+|.+.++. +++.+.+.++.+|++||++||+.. .+++||||||.|||++++ +.++|.|||.+.
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~-~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDS-GLPVLMDLGSAT 177 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCC-CceEEEeccCcc
Confidence 888877 8999999854 677888999999999999999982 259999999999999998 689999999986
Q ss_pred cccccc----ccccCccccccccCCcccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHH
Q 008898 396 VHHQSH----QVSENVKPVNVVGTFGYLAPEYMMY---GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARS 468 (549)
Q Consensus 396 ~~~~~~----~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~ 468 (549)
...-.- ....-.....-..|..|.|||.+.- ...++++|||||||+||.|+.|..||+.......++
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl------ 251 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL------ 251 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE------
Confidence 533211 0111111123457899999999874 456899999999999999999999997544321111
Q ss_pred hhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 469 LLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 469 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.-....+.+.-+-.....+.+.+++++|++.||.+||++.+++..++.
T Consensus 252 ------aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 252 ------ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred ------EEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 011111122222223356788999999999999999999999998765
No 114
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.3e-38 Score=314.09 Aligned_cols=245 Identities=24% Similarity=0.378 Sum_probs=197.5
Q ss_pred CCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
+|+..+.||+|+||.||++.+.++..+|+|++.........+.+|+++++.++||||+++++++...+..+++|||+ ++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 57888899999999999998877788999998766656678889999999999999999999999999999999999 67
Q ss_pred CHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 332 SLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 332 sL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
+|.+++.. +++.....++.||+.||.|||+. +|+||||||+||+++.+ +.+||+|||++.........
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~-~~~kl~dfg~~~~~~~~~~~---- 156 (256)
T cd05059 85 CLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGED-NVVKVSDFGLARYVLDDQYT---- 156 (256)
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCC-CcEEECCcccceeccccccc----
Confidence 89999854 57778899999999999999999 99999999999999998 68999999998654321111
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
......++..|+|||.+.+..++.++|||||||++|||++ |..||........ . ..... + .....
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~----~~~~~-~-----~~~~~--- 222 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-V----ESVSA-G-----YRLYR--- 222 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-H----HHHHc-C-----CcCCC---
Confidence 1111234567999999999999999999999999999999 7999875443211 1 11110 1 01111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLF 520 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 520 (549)
+...+..+.+++.+||..+|++|||+.++++.|
T Consensus 223 -~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 -PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 122345688899999999999999999999876
No 115
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.7e-38 Score=312.32 Aligned_cols=251 Identities=26% Similarity=0.364 Sum_probs=199.2
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC------HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS------EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
++|...+.||+|+||.||++.. .+++.+|+|.+...... ...+.+|++++++++||||+++++++.+++.+++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999999976 56899999998754321 2357789999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
++|++ +++|.+++.. ++......++.|++.||.|||+. +|+|+||+|+||+++.+ +.++|+|||++......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~-~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSA-GNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC-CCEEEeecccceecccc
Confidence 99999 6789998864 56677888999999999999999 99999999999999988 68999999998654321
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
.. .........|+..|+|||.+.+..++.++|||||||++|||++|+.||......... . .....
T Consensus 158 ~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----~-~~~~~-------- 222 (263)
T cd06625 158 CS--SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI----F-KIATQ-------- 222 (263)
T ss_pred cc--ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH----H-HHhcc--------
Confidence 11 111112456888999999999988999999999999999999999999754322111 0 00000
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.....++......+.+++..||..+|.+|||+.++++ |+||
T Consensus 223 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~-----~~~~ 263 (263)
T cd06625 223 -PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR-----HFFV 263 (263)
T ss_pred -CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh-----CCCC
Confidence 0111122233456778889999999999999999999 7775
No 116
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.7e-38 Score=318.69 Aligned_cols=248 Identities=26% Similarity=0.409 Sum_probs=197.3
Q ss_pred cCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYA 323 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 323 (549)
.+|.+.+.||+|+||.||+|... +++.+|+|.++..... .+.+.+|+++++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 45788889999999999999753 2478999999765433 357889999999999999999999999999999
Q ss_pred EEEecc-CCCHHHHHHH-----------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCc
Q 008898 324 IVYNLL-NGSLKQYLKQ-----------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHH 385 (549)
Q Consensus 324 lv~e~~-~gsL~~~l~~-----------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~ 385 (549)
++|||+ +|+|.+++.. +++.....++.|++.||.|||++ +++||||||+||+++.+ +.
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~-~~ 160 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYD-LV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCC-Ce
Confidence 999999 7899999853 45667788999999999999999 99999999999999998 69
Q ss_pred eEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHH
Q 008898 386 PQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVL 464 (549)
Q Consensus 386 ~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~ 464 (549)
++|+|||++......... .......+++.|+|||++.++.++.++|||||||++|||++ |..||....... ...
T Consensus 161 ~kl~d~g~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~~~ 235 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYY---RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--VIE 235 (280)
T ss_pred EEECCcccceecccCcce---ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHH
Confidence 999999998654322111 11123346788999999999999999999999999999998 999987554322 111
Q ss_pred HHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 465 WARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 465 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
. .. .+... ..+......+.+++..||..||.+||++.|+++.|+
T Consensus 236 ~---~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 236 C---IT-QGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred H---HH-cCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1 11 11110 111223456788999999999999999999999885
No 117
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2e-38 Score=318.89 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=199.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+..++||+|+||.||++.+ .+++.+|+|++...... ...+.+|+.++++++||||+++++++...+.++++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999976 57899999998754322 35688999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 329 L-NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 329 ~-~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
+ +|+|..+ ..+++.....++.|++.||.|||+. +|+|+||||+|||++.+ +.++|+|||++......
T Consensus 81 ~~~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~-~~~~l~dfg~~~~~~~~------- 148 (279)
T cd06619 81 MDGGSLDVY-RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTR-GQVKLCDFGVSTQLVNS------- 148 (279)
T ss_pred CCCCChHHh-hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCC-CCEEEeeCCcceecccc-------
Confidence 9 5566544 4567778889999999999999999 99999999999999998 68999999998643221
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhH--HHHHHHhhcccccccccCCcccc
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESL--VLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l--~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
......||..|+|||++.+..++.++|+|||||++|+|++|+.||.......... ..+....... ..+.+.
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------~~~~~~- 221 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE------DPPVLP- 221 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc------CCCCCC-
Confidence 1224578999999999999899999999999999999999999997543221111 1111111100 011111
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
.......+.+++..|+..+|.+||+++++++ |+|+.+..
T Consensus 222 --~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~-----~~~~~~~~ 260 (279)
T cd06619 222 --VGQFSEKFVHFITQCMRKQPKERPAPENLMD-----HPFIVQYN 260 (279)
T ss_pred --CCcCCHHHHHHHHHHhhCChhhCCCHHHHhc-----Cccccccc
Confidence 1112345778889999999999999999998 89987554
No 118
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.7e-38 Score=317.41 Aligned_cols=250 Identities=28% Similarity=0.435 Sum_probs=198.1
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcC------Ce
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCHSK------EM 321 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~------~~ 321 (549)
+++.|+..+.||+|+||.||+|.. .+++.+|+|++.........+..|+.+++.+ +||||+++++++... ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 456788889999999999999976 5688999999987666667788999999998 699999999998642 46
Q ss_pred EEEEEecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 322 YAIVYNLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
++++|||+ +|+|.+++.. +++.....++.|++.||.|||+. +|+|+||||+||+++++ +.++|+|||++.
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~-~~~~l~Dfg~~~ 159 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTEN-AEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCC-CCEEEccCCCce
Confidence 89999999 6799998864 56777888999999999999999 99999999999999998 689999999986
Q ss_pred ccccccccccCccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh
Q 008898 396 VHHQSHQVSENVKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL 470 (549)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~ 470 (549)
..... ........|++.|+|||++. +..++.++|||||||++|||++|..||............ .
T Consensus 160 ~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~-----~ 229 (272)
T cd06637 160 QLDRT-----VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-----P 229 (272)
T ss_pred ecccc-----cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH-----h
Confidence 54321 11223467899999999986 345888999999999999999999999754432211100 0
Q ss_pred cccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 471 SSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 471 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
... .+.. ........+.+++.+||..||.+|||+.++++ |+||
T Consensus 230 -~~~-----~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~-----~~~~ 272 (272)
T cd06637 230 -RNP-----APRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK-----HPFI 272 (272)
T ss_pred -cCC-----CCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh-----CCCC
Confidence 000 0111 11123345788899999999999999999998 8886
No 119
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.6e-38 Score=325.94 Aligned_cols=253 Identities=19% Similarity=0.232 Sum_probs=195.7
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||++.. .+++.+|+|+++.... ..+.+.+|+.++.++ +||||+++++++.+.+.+++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3699999999999987 5688999999985432 224477899999888 6999999999999999999999999 7
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|..++.. +++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++..... ...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~-----~~~ 151 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDAD-GHIKLTDYGMCKEGLG-----PGD 151 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCC-CCEEEeccccceeccC-----CCC
Confidence 799888753 77888899999999999999999 99999999999999998 6899999999854221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchh-hHHHHHHHhhcccccccccCCccccc
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRE-SLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....+......... ..++.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------~~~p~- 224 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP------IRIPR- 224 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC------CCCCC-
Confidence 23356799999999999999999999999999999999999999964322110 11111111111110 01111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHHhcCCchhhhhhhHHH
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPT------MKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs------~~evl~~L~~~~~w~~~~~~~~ 534 (549)
.....+.+++..||..||.+||+ +.++++ |+||....+..
T Consensus 225 ---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~-----h~~f~~~~~~~ 270 (327)
T cd05617 225 ---FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKS-----HTFFRSIDWDL 270 (327)
T ss_pred ---CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHc-----CCCCCCCCHHH
Confidence 22345678889999999999998 467776 88988765443
No 120
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.6e-39 Score=333.53 Aligned_cols=261 Identities=21% Similarity=0.306 Sum_probs=198.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|+..+.||+|+||.||++.. .+++.+|+|+++... .....+.+|+.++..++||||+++++.+.+++.+++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688899999999999999987 468999999997532 12345778999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.+ ++......++.|++.||.|||++ +|+||||||+|||++.+ +.++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~-~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAK-GHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCC-CCEEEeeccCCcccccccc
Confidence 999 6799999854 67778888999999999999999 99999999999999988 7999999999864322110
Q ss_pred c------------------------------ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 008898 403 V------------------------------SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAI 452 (549)
Q Consensus 403 ~------------------------------~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~ 452 (549)
. .........+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0 0001122457999999999999999999999999999999999999999
Q ss_pred CCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHhcCCchhhhh
Q 008898 453 QTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT---MKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 453 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs---~~evl~~L~~~~~w~~~ 529 (549)
........ . ..+.... ..+.-+. ...++ ..+.+++..|+ .||.+|++ +.++++ |+||..
T Consensus 237 ~~~~~~~~-~----~~i~~~~--~~~~~p~-~~~~s----~~~~~li~~l~-~~p~~R~~~~~~~ei~~-----hp~f~~ 298 (360)
T cd05627 237 CSETPQET-Y----RKVMNWK--ETLVFPP-EVPIS----EKAKDLILRFC-TDSENRIGSNGVEEIKS-----HPFFEG 298 (360)
T ss_pred CCCCHHHH-H----HHHHcCC--CceecCC-CCCCC----HHHHHHHHHhc-cChhhcCCCCCHHHHhc-----CCCCCC
Confidence 76543221 1 1111100 0010010 01122 34455556665 49999985 677777 899987
Q ss_pred hhHHH
Q 008898 530 KREKE 534 (549)
Q Consensus 530 ~~~~~ 534 (549)
.....
T Consensus 299 ~~~~~ 303 (360)
T cd05627 299 VDWGH 303 (360)
T ss_pred CCHHH
Confidence 65544
No 121
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.6e-38 Score=314.01 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=198.7
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++|...+.||+|+||.||++...++..+|+|.++......+.+.+|+.+++.++||||+++++++...+.++++|||+ +
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 357788899999999999998877777999999876666678999999999999999999999999989999999999 6
Q ss_pred CCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 331 GSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 331 gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
|+|.+++.. +.+...+.++.||+.||.|||+. +++|+||||+||+++.+ +.+||+|||++........
T Consensus 84 ~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~-~~~kl~d~g~~~~~~~~~~---- 155 (256)
T cd05113 84 GCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQ-GCVKVSDFGLSRYVLDDEY---- 155 (256)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCC-CCEEECCCccceecCCCce----
Confidence 789999854 67788899999999999999999 99999999999999988 6899999999865432211
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||....... . ......... +..
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~---~~~~~~~~~------~~~-- 222 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--T---VEKVSQGLR------LYR-- 222 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--H---HHHHhcCCC------CCC--
Confidence 11112345678999999998889999999999999999998 999987544321 1 111111110 001
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
.......+.+++..||..+|.+||++.+|++.|+
T Consensus 223 --~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 --PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1112456788999999999999999999998764
No 122
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.6e-38 Score=315.06 Aligned_cols=251 Identities=23% Similarity=0.290 Sum_probs=193.6
Q ss_pred EcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 260 IGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 260 lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
||+|+||.||++.. .+|+.+|+|.+..... ....+..|+++++.++||||+++++++..+..++++|||+ +|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999976 5699999999864321 1234567999999999999999999999999999999999 6789
Q ss_pred HHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcc
Q 008898 334 KQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVK 408 (549)
Q Consensus 334 ~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~ 408 (549)
.+++.. +.+.....++.||+.||.|||+. +|+||||||+||+++.+ +.++|+|||++...... ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~-~~~~l~Dfg~~~~~~~~------~~ 150 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQ-GNCRLSDLGLAVELKDG------KT 150 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCC-CCEEEeeceeeeecCCC------ce
Confidence 888743 56677788999999999999999 99999999999999998 68999999998654321 11
Q ss_pred ccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCC
Q 008898 409 PVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYN 488 (549)
Q Consensus 409 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 488 (549)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ............ +.. . .
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~-----~~~-~----~ 219 (277)
T cd05607 151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKRRTLEDE-----VKF-E----H 219 (277)
T ss_pred eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHHHhhccc-----ccc-c----c
Confidence 2245689999999999988999999999999999999999999975433211 111111111110 000 0 1
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 489 REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 489 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
......+.+++..||+.||.+||++.|+++.+. .|+||+..+.
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~-~h~~f~~~~~ 262 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDPR-KHEFFKTINF 262 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhhhh-cChhhcCCCH
Confidence 123445788999999999999999966554333 3789977543
No 123
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-39 Score=332.54 Aligned_cols=244 Identities=25% Similarity=0.371 Sum_probs=204.5
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCe-EEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEM-YAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~lv~ 326 (549)
++|...+.+|+|+||.++.+.+ .+++.+++|.+...... ......|+.++++++|||||.+.+.|.+++. ++|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5688899999999999999977 56889999999766533 3457899999999999999999999988888 99999
Q ss_pred ecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 327 NLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 327 e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+|+ +|+|.+.+.+ +++.....++.|++.|+.|||++ .|+|||||+.|||++.+ +.++|+|||+|+...+.
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~-~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKD-KKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhcccc-CceeecchhhhhhcCCc
Confidence 999 7899999854 67788899999999999999998 99999999999999999 67899999999876553
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
. ....+.+|||.||.||++.+.+|+.|+|||||||++|||++-+++|...+... + ...+ ....
T Consensus 160 ~-----~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~--L---i~ki-----~~~~-- 222 (426)
T KOG0589|consen 160 D-----SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE--L---ILKI-----NRGL-- 222 (426)
T ss_pred h-----hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH--H---HHHH-----hhcc--
Confidence 2 24557899999999999999999999999999999999999999998765322 1 1111 1111
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKL 519 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 519 (549)
..+.+......+..++..|++.+|..||++.+++..
T Consensus 223 ---~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 ---YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 223344445567778899999999999999999984
No 124
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.4e-38 Score=318.59 Aligned_cols=250 Identities=24% Similarity=0.348 Sum_probs=198.2
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
|+..+.||+|+||.||++.. .+++.+|+|.+...... ...+..|+.+++.++|+||+++++.+.+++.++++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 67778999999999999976 56899999998754322 23467899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+||+++.+ +.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~-~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCC-CCEEEeeccceeecCCCc-
Confidence 9 6789988843 66677888999999999999998 99999999999999988 689999999986533211
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...... .... . ..
T Consensus 157 -----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~~~-~~~~-----~-~~- 222 (285)
T cd05630 157 -----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVER-LVKE-----V-QE- 222 (285)
T ss_pred -----cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHHHh-hhhh-----h-hh-
Confidence 11234789999999999999999999999999999999999999986543211 000000 0000 0 00
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcCCchhhhhh
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPT-----MKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~L~~~~~w~~~~ 530 (549)
.+.......+.+++..||+.||.+||| +.++++ |+||+..
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~-----h~~~~~~ 267 (285)
T cd05630 223 ---EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE-----HPLFKQI 267 (285)
T ss_pred ---hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc-----Chhhhcc
Confidence 111223345778899999999999999 899998 8999764
No 125
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.8e-38 Score=313.06 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=198.9
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++|++.+.||+|+||.||++...++..+|+|.++......+.+.+|+.+++.++|+|++++++++.. +..+++|||+ +
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSK 84 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecCC
Confidence 4688899999999999999988788889999998766667789999999999999999999998865 5578999999 6
Q ss_pred CCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 GSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
++|.+++.. +++..+..++.+++.||.|||+. +|+||||||+||+++++ +.++|+|||++........
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~-~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDG-LVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCC-ceEEeCCceeeeeccCccc---
Confidence 799999853 67788899999999999999999 99999999999999998 6899999999865432211
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
.......++..|+|||.+.+..++.++|+||||+++|+|++ |..||...... +.+. .+.... .
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~----~~~~~~------~---- 221 (260)
T cd05070 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLE----QVERGY------R---- 221 (260)
T ss_pred -ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHH----HHHcCC------C----
Confidence 11112345678999999988889999999999999999999 88898654321 1111 111100 0
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
...+......+.+++.+|+..+|.+|||+.++.++|++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11122334568889999999999999999999998865
No 126
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.3e-39 Score=330.28 Aligned_cols=245 Identities=24% Similarity=0.327 Sum_probs=194.3
Q ss_pred ceEcccCceEEEEEEe----cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 258 MLIGQGGNSKVYRTNH----VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~----~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
+.||+|+||.||++.. .+|+.+|+|+++.... ....+..|++++++++||||+++++++.+++.+++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5699999999999864 3588999999975432 2245678999999999999999999999999999999999
Q ss_pred CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 ~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+|+|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++...... .
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~-----~ 152 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEE-GHIKLTDFGLSKESIDH-----E 152 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCC-CcEEEeeccCCcccCCC-----C
Confidence 6899999854 67888899999999999999999 99999999999999998 68999999998643221 1
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ . ..+.... ..+
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~----~~i~~~~-------~~~--- 217 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET-M----TMILKAK-------LGM--- 217 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH-H----HHHHcCC-------CCC---
Confidence 223356799999999999988899999999999999999999999976543211 1 1111110 011
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhcCCchhhhhhhH
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTM-----KTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~L~~~~~w~~~~~~ 532 (549)
+......+.++++.||+.||.+||++ .++++ |+||.....
T Consensus 218 -p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~-----~~~~~~~~~ 262 (318)
T cd05582 218 -PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKR-----HPFFSTIDW 262 (318)
T ss_pred -CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhC-----CCCcCCCCH
Confidence 12223457788899999999999994 55554 788876543
No 127
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.9e-38 Score=323.17 Aligned_cols=258 Identities=22% Similarity=0.311 Sum_probs=188.2
Q ss_pred ceEcccCceEEEEEEec---CCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEE--cCCeEEEEEeccCCC
Q 008898 258 MLIGQGGNSKVYRTNHV---DGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCH--SKEMYAIVYNLLNGS 332 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~---~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~lv~e~~~gs 332 (549)
..||+|+||.||+|... ++..+|+|.+..... ...+.+|+.+++.++||||+++++++. .+..++++|||++++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~ 85 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHD 85 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCc
Confidence 57999999999999864 357899999875442 346788999999999999999999884 456789999999999
Q ss_pred HHHHHH------------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEe----cCCCceEEeeeccccc
Q 008898 333 LKQYLK------------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLS----ENFHHPQLSDFGAAMV 396 (549)
Q Consensus 333 L~~~l~------------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~----~~~~~~kL~DFGla~~ 396 (549)
|.+++. .+++.....++.||+.||.|||+. +|+||||||+|||+. .+ +.+||+|||++..
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~-~~~kl~DfG~a~~ 161 (317)
T cd07867 86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPER-GRVKIADMGFARL 161 (317)
T ss_pred HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCC-CcEEEeeccceec
Confidence 988874 255667788999999999999999 999999999999994 33 5899999999976
Q ss_pred cccccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccch--------hhHHHHHH
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANR--------ESLVLWAR 467 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~--------~~l~~~~~ 467 (549)
...... .........||+.|+|||++.+. .++.++|||||||++|||+||++||.....+. ..+..+..
T Consensus 162 ~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07867 162 FNSPLK--PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239 (317)
T ss_pred cCCCcc--cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence 543211 11122345789999999998764 57999999999999999999999997543211 11111111
Q ss_pred Hhhccc--cc---------ccccC---------Cccc---ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 468 SLLSSG--LC---------ERLID---------PQLN---EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 468 ~~~~~~--~~---------~~~~d---------~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
.+.... .. ..... +.+. ..........+.+++..|+..||.+|||+.|+++ |
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~-----h 314 (317)
T cd07867 240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ-----D 314 (317)
T ss_pred hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc-----C
Confidence 000000 00 00000 0000 0000111245778999999999999999999998 8
Q ss_pred hhh
Q 008898 525 YWL 527 (549)
Q Consensus 525 ~w~ 527 (549)
+||
T Consensus 315 p~f 317 (317)
T cd07867 315 PYF 317 (317)
T ss_pred CCC
Confidence 886
No 128
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.4e-38 Score=312.85 Aligned_cols=251 Identities=22% Similarity=0.369 Sum_probs=200.4
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|.+.+.||+|+||.||+|.. .+++.+|+|.++.... ....+.+|+.+++.++||||+++++++.+.+.+++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4788999999999999999976 5789999998864321 1245788999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 327 NLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 327 e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
||+ +|+|.+++.. ++......++.|++.||.|||++ +++|+||||+||+++.+ +.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~-~~~~l~d~g~~~~~~ 157 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITAT-GVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCC-CCEEECccccceecc
Confidence 999 5789888743 45667788999999999999999 99999999999999998 689999999986643
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
... .......|++.|+|||.+.+..++.++|+||||+++|||++|+.||.........+. .......
T Consensus 158 ~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~---~~~~~~~----- 224 (267)
T cd08228 158 SKT-----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC---QKIEQCD----- 224 (267)
T ss_pred chh-----HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH---HHHhcCC-----
Confidence 321 112234688999999999988899999999999999999999999976543322221 1111100
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
.+ ..........+.+++.+||..+|.+||++.++++.|++.
T Consensus 225 -~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 225 -YP---PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -CC---CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11 111223456688899999999999999999999988754
No 129
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.8e-38 Score=334.10 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=196.1
Q ss_pred hcCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIK-HENIVRIIGYCHSKEM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~ 321 (549)
.++|.+.++||+|+||.||+|.+. .+..||||+++..... .+.+.+|+.+++.+. ||||++++++|.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 357889999999999999999752 1347999999754322 356889999999996 9999999999999999
Q ss_pred EEEEEecc-CCCHHHHHHH-------------------------------------------------------------
Q 008898 322 YAIVYNLL-NGSLKQYLKQ------------------------------------------------------------- 339 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~------------------------------------------------------------- 339 (549)
.+++|||+ +|+|.+++.+
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 99999999 7899988743
Q ss_pred --------------------------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEec
Q 008898 340 --------------------------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSE 381 (549)
Q Consensus 340 --------------------------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~ 381 (549)
+++.....++.||++||.|||+. +|+||||||+|||++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 33455677999999999999999 9999999999999999
Q ss_pred CCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchh
Q 008898 382 NFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRE 460 (549)
Q Consensus 382 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~ 460 (549)
+ +.+||+|||++........ ........+++.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 273 ~-~~~kL~DfGla~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 273 G-KIVKICDFGLARDIMHDSN---YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred C-CEEEEEeCCcceecccccc---ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 8 6899999999865432211 112223457788999999998899999999999999999997 9999876433221
Q ss_pred hHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 461 SLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 461 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.. ... ..+. .. ..+...+..+.+++.+||..||.+||++.+|.+.|+.
T Consensus 349 ~~----~~~-~~~~-----~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 349 FY----NKI-KSGY-----RM----AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred HH----HHH-hcCC-----CC----CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 11 111 1110 01 1122345668889999999999999999999998864
No 130
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8.4e-39 Score=336.31 Aligned_cols=263 Identities=24% Similarity=0.338 Sum_probs=206.4
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC-C-----CCeeeEEEEEEcCCeEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIK-H-----ENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~-h-----~nIv~l~~~~~~~~~~~lv 325 (549)
+|.+.++||+|+||.|.+|.. .+++.||||+++....-..+...|+.||..|+ | -|+|+++++|.-.+++|||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 678889999999999999965 77999999999976655567778999999997 4 4899999999999999999
Q ss_pred EeccCCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC-CCceEEeeecccccccc
Q 008898 326 YNLLNGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN-FHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 326 ~e~~~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~~kL~DFGla~~~~~ 399 (549)
+|++.-+|.++++. ++......++.||+.||.+||+. +|||+||||+||||.+. ...+||+|||.|.....
T Consensus 267 fELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 267 FELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred ehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 99999999999976 66778889999999999999999 99999999999999643 23799999999966443
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc------
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG------ 473 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~------ 473 (549)
.. .+.+-+..|.|||++.|.+|+.+.||||||||++||++|.+.|.+..+ .+.+....+.+....
T Consensus 344 ~v--------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne-~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 344 RV--------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE-YDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred cc--------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH-HHHHHHHHHHhCCCCHHHHHh
Confidence 22 144567789999999999999999999999999999999877776654 333322222211100
Q ss_pred --ccccccCC---------------------------------ccc-------ccCCHHHHHHHHHHHHHhcccCCCCCC
Q 008898 474 --LCERLIDP---------------------------------QLN-------EEYNREEIEIVMCAARLCLLHSSSRRP 511 (549)
Q Consensus 474 --~~~~~~d~---------------------------------~l~-------~~~~~~~~~~l~~li~~Cl~~dP~~RP 511 (549)
......+. ..+ ..........+.+++++||..||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 00000110 000 011113346788999999999999999
Q ss_pred CHHHHHHHhcCCchhhhhhhH
Q 008898 512 TMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 512 s~~evl~~L~~~~~w~~~~~~ 532 (549)
|..+.++ |+|+.+..-
T Consensus 495 tp~qal~-----Hpfl~~~~~ 510 (586)
T KOG0667|consen 495 TPAQALN-----HPFLTGTSL 510 (586)
T ss_pred CHHHHhc-----Ccccccccc
Confidence 9999999 999985543
No 131
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.8e-38 Score=325.15 Aligned_cols=251 Identities=21% Similarity=0.341 Sum_probs=197.2
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~ 326 (549)
+|...+.||+|+||.||++.. .+|+.||+|+++... ...+.+..|..+++.+. |++|+++++++.+.+.+++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 477889999999999999976 568999999997542 12245678888988875 577888999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. +++.+...++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++.....
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~-~~ikL~Dfg~~~~~~~--- 153 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSE-GHIKIADFGMCKEHMV--- 153 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCC-CCEEEeccccccccCC---
Confidence 999 6799999854 67888999999999999999999 99999999999999998 6899999999864321
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .. ..+... ...
T Consensus 154 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~---~~i~~~-------~~~ 219 (323)
T cd05615 154 --DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--LF---QSIMEH-------NVS 219 (323)
T ss_pred --CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH--HH---HHHHhC-------CCC
Confidence 1112234579999999999999999999999999999999999999997654321 11 111110 011
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhcCCchhhhhhhHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTM-----KTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~L~~~~~w~~~~~~~ 533 (549)
. +......+.+++.+|+..+|.+|++. .++.+ |+||......
T Consensus 220 ~----p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~-----h~~f~~~~~~ 266 (323)
T cd05615 220 Y----PKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIRE-----HAFFRRIDWD 266 (323)
T ss_pred C----CccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhc-----CcccCCCCHH
Confidence 1 12223456788899999999999984 45554 7888765443
No 132
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.8e-38 Score=332.92 Aligned_cols=260 Identities=20% Similarity=0.273 Sum_probs=199.4
Q ss_pred HHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCe
Q 008898 247 LCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEM 321 (549)
Q Consensus 247 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 321 (549)
+....++|...+.||+|+||.||++.+ .+++.+|+|++.... .....+.+|+.+++.++||||+++++.+.+++.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 334457899999999999999999987 468899999986432 122346789999999999999999999999999
Q ss_pred EEEEEecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 322 YAIVYNLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
++++|||+ +|+|.+++.. ++......++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~-~~ikL~DfG~a~~~~ 193 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCC-CCEEEEeCCceeEcC
Confidence 99999999 6899999865 55666778899999999999999 99999999999999998 799999999986543
Q ss_pred cccccccCccccccccCCccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGK----VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL 474 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 474 (549)
... .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... . ...+.....
T Consensus 194 ~~~----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~----~-~~~i~~~~~ 264 (371)
T cd05622 194 KEG----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----T-YSKIMNHKN 264 (371)
T ss_pred cCC----cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH----H-HHHHHcCCC
Confidence 211 11223567999999999987543 7899999999999999999999997654321 1 111111111
Q ss_pred cccccCCcccccCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhcCCchhhhhhh
Q 008898 475 CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSR--RPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 475 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~~L~~~~~w~~~~~ 531 (549)
...+. . .......+.+++..|+..++.+ ||++.++++ |+||+...
T Consensus 265 ~~~~~-----~--~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~-----h~~~~~~~ 311 (371)
T cd05622 265 SLTFP-----D--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR-----HLFFKNDQ 311 (371)
T ss_pred cccCC-----C--cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc-----CcccCCCC
Confidence 00111 0 1123445677788899844443 789999998 78887643
No 133
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.3e-38 Score=317.71 Aligned_cols=249 Identities=23% Similarity=0.385 Sum_probs=195.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-----cCCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-----VDGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
++|+..+.||+|+||.||+|.. .++..+|+|.++..... ...+.+|+.+++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4678889999999999999964 24678999999754322 2467889999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHH--------------------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC
Q 008898 325 VYNLL-NGSLKQYLK--------------------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF 383 (549)
Q Consensus 325 v~e~~-~gsL~~~l~--------------------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~ 383 (549)
+|||+ +|+|.+++. .+++.....++.|++.||.|||++ +|+||||||+|||++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~- 160 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ- 160 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC-
Confidence 99999 679999984 245667788999999999999999 99999999999999988
Q ss_pred CceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhH
Q 008898 384 HHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESL 462 (549)
Q Consensus 384 ~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l 462 (549)
+.+||+|||++......... .......++..|+|||++.++.++.++|||||||++|||++ |..||...... ..
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~~ 235 (283)
T cd05090 161 LHVKISDLGLSREIYSADYY---RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--EV 235 (283)
T ss_pred CcEEeccccccccccCCcce---ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 68999999998654332111 11223446778999999998889999999999999999998 88898654321 11
Q ss_pred HHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 463 VLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 463 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.. ... .... . ..+......+.+++..|++.||.+||++.+|++.|..
T Consensus 236 ~~---~~~-~~~~-----~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 IE---MVR-KRQL-----L----PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HH---HHH-cCCc-----C----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11 111 1110 0 1112234567888899999999999999999998753
No 134
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.6e-38 Score=313.38 Aligned_cols=247 Identities=26% Similarity=0.388 Sum_probs=199.0
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++|.+.+.||+|+||.||+|...++..+|+|.++......+.+.+|+.+++.++||||+++++++.+ +..+++|||+ +
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 84 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCC
Confidence 5688999999999999999987666789999998766666788999999999999999999998755 5578999999 6
Q ss_pred CCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 GSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
|+|.+++.. +++.....++.|+++||.|||+. +++|+||||+||+++++ +.++|+|||.+.........
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~-~~~~L~dfg~~~~~~~~~~~-- 158 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGEN-LVCKVADFGLARLIEDNEYT-- 158 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCC-CcEEeccCCceeeccccccc--
Confidence 799999964 56778899999999999999999 99999999999999998 68999999998654332211
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
......++..|+|||++.+..++.++|||||||++|||++ |..||........ . ....... .
T Consensus 159 --~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-~----~~~~~~~----------~ 221 (262)
T cd05071 159 --ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-L----DQVERGY----------R 221 (262)
T ss_pred --cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-H----HHHhcCC----------C
Confidence 1123346778999999988899999999999999999999 7888865532211 1 1111100 0
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.....+.+..+.+++..|++.||.+||++.+++++|++
T Consensus 222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 11123445678899999999999999999999998864
No 135
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.7e-38 Score=315.33 Aligned_cols=248 Identities=23% Similarity=0.388 Sum_probs=202.0
Q ss_pred hcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
..+|...+.||.|+||.||+|...+++.+|+|+++.... ....+.+|+.+++.++||||+++++++...+.++++|||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 456888999999999999999987799999999986654 3567889999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 330 -NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 330 -~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+|+|.+++.. +++.....++.||+.||.|||+. +|+|+||||+||+++++ +.+||+|||++.......
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~-~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 85 EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGED-LVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCC-ceEEEccccchhhcCCcc--
Confidence 6799999963 67788899999999999999999 99999999999999998 689999999986543211
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......++..|+|||.+.++.++.++||||||+++|+|++ |+.||....... .+.. .. .+
T Consensus 159 ---~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~-~~~~----~~-~~--------- 220 (261)
T cd05148 159 ---YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE-VYDQ----IT-AG--------- 220 (261)
T ss_pred ---ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHH----HH-hC---------
Confidence 11113345778999999998899999999999999999998 899996544221 1111 11 00
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.....+...+..+.+++.+|++.||.+|||+.++++.|+.
T Consensus 221 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 221 YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 0011122334668889999999999999999999999875
No 136
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.4e-38 Score=320.75 Aligned_cols=267 Identities=22% Similarity=0.339 Sum_probs=202.5
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|...+.||+|+||.||++.. .+++.+|+|.++.... ....+.+|+.+++.++||||+++++++..++.++++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 4688999999999999999977 4688999999875432 234677899999999999999999999999999999999
Q ss_pred cCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+.++|.+++.. +++.....++.||++||.|||+. +|+|+||||+|||++.+ +.++|+|||++.......
T Consensus 86 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~--- 158 (301)
T cd07873 86 LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINER-GELKLADFGLARAKSIPT--- 158 (301)
T ss_pred cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCC-CcEEECcCcchhccCCCC---
Confidence 99999998854 56777888999999999999999 99999999999999998 689999999985432211
Q ss_pred cCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc--ccccccc---
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS--SGLCERL--- 478 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~--~~~~~~~--- 478 (549)
.......+++.|+|||.+.+. .++.++|||||||++|||++|++||....... .+......... ......+
T Consensus 159 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 159 --KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred --CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCChhhchhhhcc
Confidence 112234578999999988754 47899999999999999999999997654321 11111110000 0000000
Q ss_pred ------cCCcccc----cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 479 ------IDPQLNE----EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 479 ------~d~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
-.+.... .........+.+++.+|+..||.+|||+.++++ |+||..--+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~-----h~~f~~~~~~ 295 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK-----HPYFHCLGER 295 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc-----Ccccccccch
Confidence 0011000 001122346788999999999999999999999 8999665443
No 137
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.3e-38 Score=316.64 Aligned_cols=251 Identities=21% Similarity=0.364 Sum_probs=195.7
Q ss_pred hhcCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCe
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEM 321 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 321 (549)
.+++|+..+.||+|+||.||+|.+. ++..+|+|.++.... ...++.+|+.+++.++||||+++++++.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567999999999999999998642 256899999864332 23457899999999999999999999999999
Q ss_pred EEEEEecc-CCCHHHHHHH-------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceE
Q 008898 322 YAIVYNLL-NGSLKQYLKQ-------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQ 387 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~-------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~k 387 (549)
.+++|||+ +|+|.+++.. +.+.....++.|++.||.|||+. +++|+||||+||+++++ +.++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~-~~~~ 159 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED-FTVK 159 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC-CCEE
Confidence 99999998 6799999864 24456778999999999999998 99999999999999998 6899
Q ss_pred EeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHH
Q 008898 388 LSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWA 466 (549)
Q Consensus 388 L~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~ 466 (549)
|+|||++.......... ......+++.|+|||++.++.++.++|||||||++|||++ |..||....... . .
T Consensus 160 l~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~--~---~ 231 (277)
T cd05062 160 IGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ--V---L 231 (277)
T ss_pred ECCCCCccccCCcceee---cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--H---H
Confidence 99999986543321111 1112345788999999998899999999999999999999 688886543321 1 1
Q ss_pred HHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 467 RSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 467 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
........ . ..+...+..+.+++.+|++.||.+|||+.++++.|+.
T Consensus 232 ~~~~~~~~-~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 232 RFVMEGGL-L---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHcCCc-C---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11111110 0 0112234568889999999999999999999998753
No 138
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.8e-38 Score=322.88 Aligned_cols=250 Identities=23% Similarity=0.403 Sum_probs=192.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCc----EEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQ----VAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
.+|+..+.||+|+||.||+|.+ .+|. .+|+|+++.... ...++.+|+.+++.++||||++++++|.... .++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~-~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC-cee
Confidence 4699999999999999999975 3344 489999875432 2356889999999999999999999998754 556
Q ss_pred EEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
+++|+ +|+|.+++.. +++...+.++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~-~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCC-CcEEEccccccccccC
Confidence 77777 8899999864 56777889999999999999999 99999999999999998 6899999999976543
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.... .......++..|+|||.+.+..++.++|||||||++|||++ |..||....... +.. ... .+. ..
T Consensus 162 ~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~~~---~~~-~~~--~~ 230 (316)
T cd05108 162 DEKE---YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISS---ILE-KGE--RL 230 (316)
T ss_pred CCcc---eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHH---HHh-CCC--CC
Confidence 2111 11112234678999999999999999999999999999998 999997543221 111 111 110 01
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
.. +..+...+.+++..||..+|.+||++.+++..|....
T Consensus 231 ~~-------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 231 PQ-------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred CC-------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 10 1112345778889999999999999999999776443
No 139
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.8e-38 Score=326.83 Aligned_cols=249 Identities=26% Similarity=0.303 Sum_probs=190.4
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHH-HHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVE-LLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+.||+|+||.||++.. .+|+.+|+|++.... .....+..|.. +++.++||||+++++++..++.++++|||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3699999999999977 578999999997532 12234555655 577899999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|..++.. +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++..... ...
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~-~~~kL~DfG~~~~~~~-----~~~ 151 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQ-GHVVLTDFGLCKEGIA-----QSD 151 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCC-CCEEEeecCCcccCCC-----CCC
Confidence 789888854 67778888999999999999999 99999999999999998 6899999999854221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||........ ........ ......
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-----~~~~~~~~-------~~~~~~- 218 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM-----YDNILHKP-------LVLRPG- 218 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH-----HHHHHcCC-------ccCCCC-
Confidence 23356799999999999999999999999999999999999999976543211 11111110 011111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
....+.++++.|+..+|.+||++++.++.+. .|+||.....
T Consensus 219 ---~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~-~h~~f~~~~~ 259 (325)
T cd05604 219 ---ASLTAWSILEELLEKDRQRRLGAKEDFLEIQ-EHPFFESLSW 259 (325)
T ss_pred ---CCHHHHHHHHHHhccCHHhcCCCCCCHHHHh-cCCCcCCCCH
Confidence 2345667889999999999998863332222 1678876443
No 140
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.7e-38 Score=325.45 Aligned_cols=251 Identities=25% Similarity=0.313 Sum_probs=191.1
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHH-HHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVE-LLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+.||+|+||.||++.+ .+++.+|+|++..... ....+..|.. +++.++||||+++++++.+++.++++|||+ +
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 3699999999999987 4678999999975321 1233444544 568899999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|.+++.. +.......++.||++||.|||++ +|+||||||+|||++.+ +.++|+|||++..... ...
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~-~~~kl~DfG~a~~~~~-----~~~ 151 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQ-GHIVLTDFGLCKENIE-----HNG 151 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCC-CCEEEccCCCCccccc-----CCC
Confidence 789998854 55677778999999999999999 99999999999999988 6899999999854221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|.+||........ ...+... . ...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----~~~i~~~-~------~~~---- 215 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-----YDNILNK-P------LQL---- 215 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH-----HHHHHhC-C------cCC----
Confidence 23356799999999999999999999999999999999999999976543211 1111110 0 011
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
.......+.+++..|++.||.+||++.+.+..+. .|.|+......+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~-~~~~~~~~~~~~ 261 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIK-NHIFFSPINWDD 261 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHh-cCcccCCCCHHH
Confidence 1223345778889999999999999874433332 256776654443
No 141
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.1e-38 Score=311.61 Aligned_cols=248 Identities=26% Similarity=0.403 Sum_probs=199.9
Q ss_pred hcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
.++|...+.||+|+||.||+|...+++.+|+|.+........++.+|+.+++.++|+||+++++++. .+.++++||++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 4578899999999999999998888999999999877766778999999999999999999999875 45688999998
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+|+|.+++.. +++.....++.|++.||.|||+. +++|+||||+||+++++ +.++|+|||++........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSET-LCCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCC-CCEEEccCcceeecCCCCc--
Confidence 7899998853 67778889999999999999998 99999999999999998 6899999999865442111
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+. .+ .....
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~---~~~-~~-----~~~~~ 224 (260)
T cd05067 158 --TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQ---NLE-RG-----YRMPR 224 (260)
T ss_pred --ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHH---HHH-cC-----CCCCC
Confidence 11123346778999999998889999999999999999999 999997544221 111 110 11 00111
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
....+..+.+++.+|+..+|++||+++++++.|+.
T Consensus 225 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 ----PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 12234568889999999999999999999998864
No 142
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.4e-38 Score=325.16 Aligned_cols=247 Identities=26% Similarity=0.309 Sum_probs=190.7
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHH-HHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVE-LLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||++.+ .+|+.+|+|++..... ....+..|.. +++.++||||+++++++.+.+.++++|||+ +
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999987 5689999999975321 1234555554 678899999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|..++.. +.......++.||++||.|||+. +|+||||||+|||++.+ +.+||+|||++..... ...
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~~~-----~~~ 151 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQ-GHVVLTDFGLCKEGVE-----PEE 151 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCC-CCEEEccCCCCccCCC-----CCC
Confidence 789888754 56777888999999999999999 99999999999999998 6899999999854221 112
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||....... ........ . . .+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~~i~~~-~------~----~~ 215 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ-----MYDNILHK-P------L----QL 215 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH-----HHHHHhcC-C------C----CC
Confidence 2335679999999999998899999999999999999999999997654221 11111111 0 0 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHH----HHHHHhcCCchhhhhhhHHH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMK----TLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~----evl~~L~~~~~w~~~~~~~~ 534 (549)
+......+.+++..||+.||.+||+.. ++++ |.|+.......
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~-----~~~~~~~~~~~ 261 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKN-----HVFFSPINWDD 261 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhC-----CCCcCCCCHHH
Confidence 122334577889999999999999764 4443 67876655443
No 143
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=311.68 Aligned_cols=260 Identities=21% Similarity=0.298 Sum_probs=211.0
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...++||+|.||+|.+++. .+|+.||+|++++.-.. ......|-.+|+..+||++..|--.|+.++.+++||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 5788999999999999999965 67999999999876432 234677999999999999999988899999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||. +|.|.-+|++ +++.....+-..|..||.|||+. +||+||||.+|+|+|.| |++||+|||+++ ..
T Consensus 248 eyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkD-GHIKitDFGLCK-----E~ 318 (516)
T KOG0690|consen 248 EYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKD-GHIKITDFGLCK-----EE 318 (516)
T ss_pred EEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccC-CceEeeecccch-----hc
Confidence 999 5678877754 67777777889999999999999 99999999999999999 899999999994 33
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
........++||||.|+|||++....|+.++|+|.+||+||||++|+.||...+.+.- +.. .+ ..++ .
T Consensus 319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL-FeL---Il-----~ed~---k 386 (516)
T KOG0690|consen 319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL-FEL---IL-----MEDL---K 386 (516)
T ss_pred ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH-HHH---HH-----hhhc---c
Confidence 5556677899999999999999999999999999999999999999999987654321 110 11 1111 2
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHHHHHhhcc
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKEELLNERR 541 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~~~~~~~~ 541 (549)
.+...++ ....++.-.|.+||.+|. .++||.+ |++|...++++...+...
T Consensus 387 FPr~ls~----eAktLLsGLL~kdP~kRLGgGpdDakEi~~-----h~FF~~v~W~~~~~Kki~ 441 (516)
T KOG0690|consen 387 FPRTLSP----EAKTLLSGLLKKDPKKRLGGGPDDAKEIMR-----HRFFASVDWEATYRKKIE 441 (516)
T ss_pred CCccCCH----HHHHHHHHHhhcChHhhcCCCchhHHHHHh-----hhhhccCCHHHHHHhccC
Confidence 2223333 344456788999999996 3566666 789999998888777543
No 144
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.9e-38 Score=316.93 Aligned_cols=261 Identities=22% Similarity=0.304 Sum_probs=198.3
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|...+.||+|+||.||++.. .+|+.+|+|.++..... ...+.+|+.+++.++||||+++++++.+.+.+++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 477888999999999999987 56899999999754322 24577899999999999999999999999999999999
Q ss_pred cCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+.++|.+++.. +++.....++.||++||.|||+. +|+||||||+||+++.+ +.++|+|||++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~--- 153 (284)
T cd07839 81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPV--- 153 (284)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCC-CcEEECccchhhccCCCC---
Confidence 99999888753 67888899999999999999999 99999999999999988 689999999986543211
Q ss_pred cCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc-----ccccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG-----LCERL 478 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~-----~~~~~ 478 (549)
.......+++.|+|||.+.+.. ++.++|||||||++|+|++|..|+.......+.+........... .....
T Consensus 154 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 154 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred --CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 1112346788999999987654 789999999999999999999887544332222221111100000 00000
Q ss_pred cCCc----cc-----ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 479 IDPQ----LN-----EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 479 ~d~~----l~-----~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.+.. .. ....+.....+.+++..||..||.+|||+.++++ |+||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~-----h~~f 284 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ-----HPYF 284 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc-----CCCC
Confidence 0100 00 0111223456788999999999999999999998 8886
No 145
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-39 Score=355.40 Aligned_cols=252 Identities=27% Similarity=0.410 Sum_probs=205.0
Q ss_pred CCCCCceEcccCceEEEEEEecC--Cc----EEEEEEeecCC--cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVD--GQ----VAAVKVLKCTN--WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~--g~----~~AvK~l~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
+-.....||+|+||.||.|...+ |. .||||.++... ....+|.+|..+|+.++||||++++|+|.+....+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 34455679999999999997643 43 48999987653 345679999999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH----------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecc
Q 008898 325 VYNLL-NGSLKQYLKQ----------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGA 393 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGl 393 (549)
++||| +|+|..||+. +...+.+.++.|||+|+.||+++ ++|||||..+|+||+.. ..+||+|||+
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~-r~VKIaDFGl 848 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDER-RVVKIADFGL 848 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeeccc-CcEEEcccch
Confidence 99999 8899999964 56778899999999999999999 99999999999999999 5899999999
Q ss_pred ccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcc
Q 008898 394 AMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSS 472 (549)
Q Consensus 394 a~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 472 (549)
|+......+...+... .-...|||||.+..+.++.|+|||||||+|||++| |..||......+ .+ .....+
T Consensus 849 ArDiy~~~yyr~~~~a---~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-v~----~~~~~g 920 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEA---MLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-VL----LDVLEG 920 (1025)
T ss_pred hHhhhhchheeccCcc---ccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-HH----HHHHhC
Confidence 9966665554444331 12347999999999999999999999999999999 778876654322 22 122233
Q ss_pred cccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchh
Q 008898 473 GLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYW 526 (549)
Q Consensus 473 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w 526 (549)
+. + ..+..+++.+.+++..||+.+|++||++..|++.+...-..
T Consensus 921 gR---L-------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 921 GR---L-------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred Cc---c-------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 31 1 22456778888999999999999999999999977665533
No 146
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.8e-38 Score=318.00 Aligned_cols=248 Identities=22% Similarity=0.337 Sum_probs=194.8
Q ss_pred CCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
+|...+.||+|+||.||+|... +++.+|+|+++..... .+.+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4667778999999999999753 2578999999755432 2457889999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHH-------------------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC
Q 008898 325 VYNLL-NGSLKQYLK-------------------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH 384 (549)
Q Consensus 325 v~e~~-~gsL~~~l~-------------------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 384 (549)
+++|+ +++|.+++. .+++.....++.|++.||.|||+. +|+||||||+|||++++ +
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~-~ 161 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK-L 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC-C
Confidence 99998 678999884 256667788999999999999999 99999999999999988 6
Q ss_pred ceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHH
Q 008898 385 HPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLV 463 (549)
Q Consensus 385 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~ 463 (549)
.+||+|||++......... .......+++.|+|||.+.++.++.++|||||||++|||++ |..||...... +
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~--- 234 (283)
T cd05091 162 NVKISDLGLFREVYAADYY---KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-D--- 234 (283)
T ss_pred ceEecccccccccccchhe---eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-H---
Confidence 8999999998654322111 11123456789999999998899999999999999999998 88888654332 1
Q ss_pred HHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 464 LWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 464 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
+...+..... ..++.+++..+.+++..|++.+|.+||++.+|++.|+.
T Consensus 235 -~~~~i~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 -VIEMIRNRQV----------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HHHHHHcCCc----------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111110 11223445668889999999999999999999998864
No 147
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.9e-38 Score=309.56 Aligned_cols=241 Identities=26% Similarity=0.392 Sum_probs=189.5
Q ss_pred eEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHH
Q 008898 259 LIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLK 334 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~ 334 (549)
.||+|+||.||+|.. .+++.+|+|.+..... ....+.+|+++++.++||||+++++++...+.++++|||+ +++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 589999999999977 5789999998864432 2356889999999999999999999999999999999998 67999
Q ss_pred HHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcccc
Q 008898 335 QYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPV 410 (549)
Q Consensus 335 ~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 410 (549)
+++.. +++...+.++.|+++||.|||+. +|+|+||||+|||++.+ +.++|+|||++......... ....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~---~~~~ 154 (252)
T cd05084 82 TFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEK-NVLKISDFGMSREEEDGVYA---STGG 154 (252)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCC-CcEEECccccCccccccccc---ccCC
Confidence 99854 57778889999999999999999 99999999999999988 68999999998653321110 0011
Q ss_pred ccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCH
Q 008898 411 NVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNR 489 (549)
Q Consensus 411 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 489 (549)
...++..|+|||.+.++.++.++|||||||++|||++ |..||........ . ..... . .....+.
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-~----~~~~~-~---------~~~~~~~ 219 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-R----EAIEQ-G---------VRLPCPE 219 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-H----HHHHc-C---------CCCCCcc
Confidence 1123467999999999999999999999999999998 8888865433211 1 01110 0 0011122
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 490 EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 490 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
..+..+.+++.+|+..+|.+|||+.++++.|+
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 33456888999999999999999999999875
No 148
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-37 Score=314.61 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=200.5
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
|+..+.||+|+||+||++.. .+++.+|+|.+...... ...+.+|+++++.++|+||+++++++..++.++++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66778899999999999977 56899999999754322 23467899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+||+++++ +.++|+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~-~~~kl~Dfg~~~~~~~~-- 155 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDY-GHIRISDLGLAVKIPEG-- 155 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCC-CCEEEecCCcceecCCC--
Confidence 9 6789888743 67788899999999999999999 99999999999999988 68999999998543221
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......|++.|+|||.+.+..++.++|+|||||++|||++|..||........ ...+........ .
T Consensus 156 ----~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~~~~~~~-------~- 222 (285)
T cd05632 156 ----ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDRRVLETE-------E- 222 (285)
T ss_pred ----CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhhccc-------c-
Confidence 112345789999999999988999999999999999999999999976543211 111111111100 0
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcCCchhhhhhhHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPT-----MKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~L~~~~~w~~~~~~~ 533 (549)
.+.......+.+++..|+..||.+||+ +.+++. |+||+.....
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~-----~~~~~~~~~~ 270 (285)
T cd05632 223 ---VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR-----HPFFRNMNFK 270 (285)
T ss_pred ---ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc-----ChhhhcCCHH
Confidence 112223345678889999999999999 778888 8999887554
No 149
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8.1e-38 Score=311.82 Aligned_cols=249 Identities=22% Similarity=0.352 Sum_probs=197.7
Q ss_pred cCCCCCceEcccCceEEEEEEecC----CcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVD----GQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
++|...+.||+|+||.||+|.... ...+|+|.++..... ..++.+|+.+++.++||||+++++++..++..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568899999999999999997632 458999998754322 34678899999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|||+ +|+|.+++.. +++...+.++.|++.||.|||++ +|+|+||||+|||++++ +.++|+|||++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~-~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSN-LVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC-CCEEECccchhhccccc
Confidence 9999 6799999854 67888899999999999999998 99999999999999998 68999999999765421
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
.. ........+++.|+|||.+.+..++.++||||||+++|+|++ |..||....... +.. ..... ..
T Consensus 160 ~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~---~~~~~-----~~ 226 (266)
T cd05033 160 EA---TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIK---AVEDG-----YR 226 (266)
T ss_pred cc---ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHH---HHHcC-----CC
Confidence 11 111112345678999999998899999999999999999998 999986543221 111 11111 00
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+ .....+..+.+++..|++.+|++||++.+|++.|+.
T Consensus 227 ~~-----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 227 LP-----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred CC-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 01 112334568899999999999999999999998864
No 150
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7e-38 Score=315.05 Aligned_cols=259 Identities=21% Similarity=0.312 Sum_probs=196.5
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|...+.||+|+||.||+|.. .++..+|+|.++.... ....+.+|+.+++.++||||+++++++.+++.++++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477888999999999999987 4689999999865432 235678899999999999999999999999999999999
Q ss_pred cCCCHHHHHHH------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 LNGSLKQYLKQ------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~~gsL~~~l~~------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+.|+|.+++.. +++.....++.||++||.|||+. +|+|+||||+||+++.+ +.++|+|||++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCC-CcEEECcccceeecCCCc-
Confidence 99999988843 56777888999999999999999 99999999999999998 689999999986433211
Q ss_pred cccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc---------
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--------- 472 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--------- 472 (549)
.......+++.|+|||.+.+. .++.++|||||||++|+|++|++||............ .......
T Consensus 156 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 156 ----RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRI-FRILGTPTEDVWPGVT 230 (285)
T ss_pred ----ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHHhCCCChhhhhcch
Confidence 111233578899999988754 4789999999999999999999999865432211111 0000000
Q ss_pred ---c---ccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 473 ---G---LCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 473 ---~---~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
. ........... .........+.+++++||..||.+|||+.+|++ |+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~-----~~~~ 285 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN-----HPYF 285 (285)
T ss_pred hhHHHHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc-----CCCC
Confidence 0 00000000000 000112345678899999999999999999998 7886
No 151
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.1e-37 Score=308.20 Aligned_cols=242 Identities=28% Similarity=0.407 Sum_probs=196.6
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|...+.||+|+||.||++.. .+++.+++|.+.... .....+.+|+.+++.++||||+++++++.+++.++++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 477888999999999999977 568999999987543 2345678899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+ +++|.+++.. +++...+.++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~-~~~~l~df~~~~~~~~~~- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAY-DNVKIGDLGVAKLLSDNT- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCC-CCEEEcccccceeccCcc-
Confidence 9 6799999854 45677788999999999999998 99999999999999998 689999999986544321
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||....... ... ... .+. .
T Consensus 156 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~---~~~-~~~----~--- 218 (256)
T cd08529 156 ----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--LIL---KII-RGV----F--- 218 (256)
T ss_pred ----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHH---HHH-cCC----C---
Confidence 11234568899999999999999999999999999999999999997654221 111 111 010 0
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
..........+.+++.+||..+|++||++.++++
T Consensus 219 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 219 --PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred --CCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 1112233456888999999999999999999998
No 152
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.5e-37 Score=308.91 Aligned_cols=247 Identities=25% Similarity=0.404 Sum_probs=197.5
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++|.....||+|+||.||++...++..+|+|.+.......+.+.+|+.+++.++|||++++++++.. +..+++|||+ +
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCCC
Confidence 4588888999999999999988777789999987666556778899999999999999999998864 5678999999 5
Q ss_pred CCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 GSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
|+|.+++.. +++.....++.|+++||.|||+. +++|+||||+||+++++ +.++|+|||++........
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~-~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDN-LVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCC-CeEEECCCccceEccCCcc---
Confidence 699999964 56778889999999999999999 99999999999999998 6899999999865432211
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
.......++..|+|||.+.++.++.++|||||||++|||++ |..||....... ... + .... ..+
T Consensus 158 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~-~---~~~~------~~~--- 222 (260)
T cd05069 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-VLE-Q---VERG------YRM--- 222 (260)
T ss_pred -cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH-H---HHcC------CCC---
Confidence 11112346778999999998899999999999999999999 899987644321 111 1 1110 001
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..+...+..+.+++.+||..||.+||++.+++++|+.
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1122345678889999999999999999999998875
No 153
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.2e-38 Score=316.79 Aligned_cols=250 Identities=27% Similarity=0.412 Sum_probs=197.0
Q ss_pred cCCCCCceEcccCceEEEEEEe------cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH------VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
++|.+.+.||+|+||.||++.. .++..+|+|.+..... ....+.+|++++++++||||+++++++...+.+++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 5688899999999999999964 2345789998875432 23568899999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH----------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceE
Q 008898 325 VYNLL-NGSLKQYLKQ----------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQ 387 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~k 387 (549)
+|||+ +|+|.+++.. +++...+.++.|++.||.|||+. +++||||||+|||++++ +.++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~-~~~k 160 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN-LLVK 160 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC-CcEE
Confidence 99999 6899999852 67778899999999999999999 99999999999999998 6899
Q ss_pred EeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHH
Q 008898 388 LSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWA 466 (549)
Q Consensus 388 L~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~ 466 (549)
|+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||....... ..
T Consensus 161 l~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~---- 232 (288)
T cd05093 161 IGDFGMSRDVYSTDY---YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VI---- 232 (288)
T ss_pred eccCCccccccCCce---eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HH----
Confidence 999999865432211 111123345788999999998899999999999999999998 899987654321 11
Q ss_pred HHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 467 RSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 467 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
..... +.. ...... ....+.+++.+||+.||.+|||+.++++.|+..
T Consensus 233 ~~i~~-~~~-----~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 233 ECITQ-GRV-----LQRPRT----CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred HHHHc-CCc-----CCCCCC----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 11111 111 011111 234578899999999999999999999987654
No 154
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.2e-37 Score=309.30 Aligned_cols=249 Identities=26% Similarity=0.402 Sum_probs=202.1
Q ss_pred hcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
.++|.+.+.||+|+||.||++...+++.+|+|.+.......+++.+|+.+++.++|+||+++++++.....++++||++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 4679999999999999999998877889999999877777788999999999999999999999999989999999998
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+++|.+++.. +++.....++.+++.||.|||++ +++|+||||+||+++++ +.++|+|||++.......
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~-~~~~l~d~g~~~~~~~~~--- 157 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGEN-LVCKIADFGLARLIEDDE--- 157 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCC-CCEEECccccceeccchh---
Confidence 6799999853 57788899999999999999999 99999999999999998 689999999986543211
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
........++..|+|||.+.+..++.++|+|||||++|+|++ |+.||...... ..+.. ... + ...
T Consensus 158 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~----~~~-~-----~~~-- 223 (261)
T cd05034 158 -YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVLEQ----VER-G-----YRM-- 223 (261)
T ss_pred -hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH----HHc-C-----CCC--
Confidence 111112234668999999998889999999999999999998 99999654322 11111 100 0 000
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..+...+..+.+++.+|+..+|.+||+++++++.|+.
T Consensus 224 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 --PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1111224568889999999999999999999998864
No 155
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.6e-38 Score=326.36 Aligned_cols=250 Identities=25% Similarity=0.409 Sum_probs=193.1
Q ss_pred cCCCCCceEcccCceEEEEEEe------cCCcEEEEEEeecCCcC--HHHHHHHHHHHhcC-CCCCeeeEEEEEEc-CCe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH------VDGQVAAVKVLKCTNWS--EEEVLREVELLSSI-KHENIVRIIGYCHS-KEM 321 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l-~h~nIv~l~~~~~~-~~~ 321 (549)
++|++.+.||+|+||.||+|.. .+++.||+|+++..... ...+.+|+.+++++ +|+||++++++|.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 4789999999999999999953 23578999998754322 24577899999999 89999999998854 467
Q ss_pred EEEEEecc-CCCHHHHHH--------------------------------------------------------------
Q 008898 322 YAIVYNLL-NGSLKQYLK-------------------------------------------------------------- 338 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~-------------------------------------------------------------- 338 (549)
++++|||+ +|+|.+++.
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 88899999 678988874
Q ss_pred --HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCC
Q 008898 339 --QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTF 416 (549)
Q Consensus 339 --~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~ 416 (549)
.+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.++|+|||++........ ........++.
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~-~~vkL~DfG~a~~~~~~~~---~~~~~~~~~~~ 239 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPD---YVRKGDARLPL 239 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCC-CcEEEeccccchhcccCcc---hhhccCCCCCc
Confidence 246677888999999999999999 99999999999999988 6899999999865432111 11122345677
Q ss_pred ccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHH
Q 008898 417 GYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIV 495 (549)
Q Consensus 417 ~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l 495 (549)
.|+|||++.+..++.++|||||||++|||++ |..||......+. + ...+ ..+.. +.. +......+
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~---~~~~-~~~~~-----~~~----~~~~~~~~ 305 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-F---CRRL-KEGTR-----MRA----PEYATPEI 305 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-H---HHHH-hccCC-----CCC----CccCCHHH
Confidence 8999999999999999999999999999998 9999975433221 1 1111 11110 011 11223567
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 496 MCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 496 ~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+++.+||+.+|++||++.+|++.|++
T Consensus 306 ~~l~~~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 306 YSIMLDCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 888999999999999999999998864
No 156
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-37 Score=314.92 Aligned_cols=254 Identities=27% Similarity=0.416 Sum_probs=204.5
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
..+|...+.||+|+||.||++.. .+++.+|+|.+...... .+.+.+|+.+++.+.||||+++++++..+...++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 35788999999999999999976 56899999998765433 35678899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 329 L-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 329 ~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
+ +|+|.+++.. +++.+...++.|++.||.|||+. +|+|+||||+|||++.+ +.++|+|||++.......
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~-~~~kl~dfg~~~~~~~~~---- 170 (296)
T cd06654 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQ---- 170 (296)
T ss_pred cCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCC-CCEEECccccchhccccc----
Confidence 9 6799999865 67788889999999999999999 99999999999999988 689999999886433211
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||........ +..+. .... +. .
T Consensus 171 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~----~~~~------~~--~ 236 (296)
T cd06654 171 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIA----TNGT------PE--L 236 (296)
T ss_pred -cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHh----cCCC------CC--C
Confidence 112234689999999999988899999999999999999999999976543221 11110 0000 00 0
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
..+......+.+++.+||..+|.+|||+.++++ ++|+....
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~-----~~~~~~~~ 277 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ-----HQFLKIAK 277 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh-----ChhhhccC
Confidence 112233456788999999999999999999998 88887643
No 157
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-39 Score=334.29 Aligned_cols=250 Identities=28% Similarity=0.414 Sum_probs=197.0
Q ss_pred cCCCCCceEcccCceEEEEEEec--CC--cE-EEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV--DG--QV-AAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~--~g--~~-~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 322 (549)
++-...++||+|+||.||+|... ++ .. ||||..+.+. ....++++|.++|++++||||+++||++.....+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 34455689999999999999763 23 23 8999998533 2235789999999999999999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
++|||+| +|+|.+||+. ++..++..++.+.|.||+|||++ ++|||||-.+|+|++.+ +.+||+|||+++..
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~-~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKK-GVVKISDFGLSRAG 312 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCC-CeEEeCccccccCC
Confidence 9999999 7899999976 66888999999999999999999 99999999999999998 46899999998654
Q ss_pred ccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
.... ... ..-.-...|+|||.+..+.|+.++|||||||++||+++ |..||......+ ....+...+
T Consensus 313 ~~~~-~~~----~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~-----v~~kI~~~~--- 379 (474)
T KOG0194|consen 313 SQYV-MKK----FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE-----VKAKIVKNG--- 379 (474)
T ss_pred ccee-ecc----ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH-----HHHHHHhcC---
Confidence 3110 000 00123468999999999999999999999999999999 788987765432 111221212
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
.....+...+..+..++..||..+|++||||.++.+.|+...
T Consensus 380 ------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~ 421 (474)
T KOG0194|consen 380 ------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE 421 (474)
T ss_pred ------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence 122223355677777888999999999999999998775433
No 158
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.8e-37 Score=320.20 Aligned_cols=260 Identities=20% Similarity=0.250 Sum_probs=196.0
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|.+.+.||+|+||.||++.. .+++.+|+|++.... .....+.+|+.++..++|+||+++++++.+++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688999999999999999987 568999999997422 12345778999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 327 NLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 327 e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
||+ +|+|.+++.+ +++.....++.||+.||.|||++ +|+||||||+|||++.+ +.++|+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKN-GHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCC-CCEEEEECCceeecCCCC
Confidence 998 7899999864 56777888999999999999999 99999999999999988 689999999985543211
Q ss_pred ccccCccccccccCCcccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMY-----GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
. .......||+.|+|||++.. +.++.++|||||||++|||++|+.||........ ...+.......
T Consensus 157 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~-----~~~i~~~~~~~ 227 (331)
T cd05597 157 T----VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-----YGKIMNHKEHF 227 (331)
T ss_pred C----ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH-----HHHHHcCCCcc
Confidence 1 11123469999999999873 4578899999999999999999999976543211 11111111100
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcc--cCCCCCCCHHHHHHHhcCCchhhhhhhHHHH
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLL--HSSSRRPTMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~--~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
.+ +.....+ ...+.++++.|+. .++..||++.++++ |+||........
T Consensus 228 ~~--~~~~~~~----~~~~~~li~~ll~~~~~r~~r~~~~~~l~-----hp~~~~~~~~~~ 277 (331)
T cd05597 228 QF--PPDVTDV----SEEAKDLIRRLICSPETRLGRNGLQDFKD-----HPFFEGIDWDNI 277 (331)
T ss_pred cC--CCccCCC----CHHHHHHHHHHccCcccccCCCCHHHHhc-----CCCCCCCCHHHH
Confidence 11 1111112 3345555666554 44455899999999 899977654433
No 159
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.2e-38 Score=314.34 Aligned_cols=242 Identities=33% Similarity=0.522 Sum_probs=185.3
Q ss_pred CceEcccCceEEEEEEec-----CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 257 KMLIGQGGNSKVYRTNHV-----DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~-----~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
.+.||.|.||.||+|.+. .+..|+||.++..... .+.+.+|++++++++||||++++|++...+.+++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999775 2568999999654322 467899999999999999999999999888899999999
Q ss_pred -CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 330 -NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 330 -~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
.|+|.+++.. +++..+..++.||++||.|||++ +++|+||+++|||++.+ +.+||+|||++.........
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~-~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSN-GQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETT-TEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc-cccccccccccccccccccc
Confidence 5899999965 67788999999999999999999 99999999999999998 69999999998665221111
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......+...|+|||.+.+..++.++||||||+++|||++ |+.||....... +...+.....
T Consensus 160 ---~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-----~~~~~~~~~~-------- 223 (259)
T PF07714_consen 160 ---KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-----IIEKLKQGQR-------- 223 (259)
T ss_dssp ---EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-----HHHHHHTTEE--------
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccc--------
Confidence 11223346778999999999999999999999999999999 678886653221 1122211111
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLF 520 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 520 (549)
...+..++..+.+++..||..||.+|||+.+|++.|
T Consensus 224 --~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 --LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111222345678889999999999999999999876
No 160
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.6e-38 Score=319.70 Aligned_cols=255 Identities=25% Similarity=0.391 Sum_probs=198.3
Q ss_pred cCCCCCceEcccCceEEEEEEec--------CCcEEEEEEeecCCc--CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCC
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV--------DGQVAAVKVLKCTNW--SEEEVLREVELLSSI-KHENIVRIIGYCHSKE 320 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 320 (549)
++|.+.+.||+|+||.||++... ++..+|+|.++.... ...++.+|+.+++.+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56889999999999999999652 235799999976432 234678899999999 7999999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEe
Q 008898 321 MYAIVYNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLS 380 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~ 380 (549)
.++++|||+ +|+|.+++.. +++.+.+.++.|++.||.|||++ +++||||||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 999999999 6799999953 56677889999999999999998 999999999999999
Q ss_pred cCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccch
Q 008898 381 ENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANR 459 (549)
Q Consensus 381 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~ 459 (549)
.+ +.++|+|||++......... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 175 ~~-~~~kL~dfg~a~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~- 249 (307)
T cd05098 175 ED-NVMKIADFGLARDIHHIDYY---KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 249 (307)
T ss_pred CC-CcEEECCCcccccccccchh---hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH-
Confidence 88 68999999998654321111 11112234568999999998889999999999999999998 88888654321
Q ss_pred hhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 460 ESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 460 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
.+ ..... .+.. ...+......+.+++..|+..+|.+|||+.++++.|+....|..
T Consensus 250 -~~---~~~~~-~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 250 -EL---FKLLK-EGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred -HH---HHHHH-cCCC---------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 11 11111 1110 01122234567788999999999999999999999977666544
No 161
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=340.86 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=197.8
Q ss_pred hcCCCCCceEcccCceEEEEEEecCC-cEEEEEEeecCC-cCHHHHHHHHHHHhcCC-CCCeeeEEEEE-E---c---CC
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVDG-QVAAVKVLKCTN-WSEEEVLREVELLSSIK-HENIVRIIGYC-H---S---KE 320 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~g-~~~AvK~l~~~~-~~~~~~~~E~~il~~l~-h~nIv~l~~~~-~---~---~~ 320 (549)
..+++++++|.+|||+.||++....+ ..||+|++-..+ ...+.+.+|+++|+.|+ |+|||.+++.. . . .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 34677889999999999999988655 999999886543 33466889999999997 99999999933 1 1 13
Q ss_pred eEEEEEeccC-CCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 321 MYAIVYNLLN-GSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 321 ~~~lv~e~~~-gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
.++|.||||. |+|-+++.+ +++.++++|++|+++|+.+||.. ..+|||||||-+||||+.+ ++.||||||.|
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~-g~~KLCDFGSa 193 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSAD-GNYKLCDFGSA 193 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCC-CCEEeCccccc
Confidence 6889999995 799999953 88999999999999999999988 5579999999999999999 79999999998
Q ss_pred cccccccccccCc----cccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHH
Q 008898 395 MVHHQSHQVSENV----KPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWAR 467 (549)
Q Consensus 395 ~~~~~~~~~~~~~----~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~ 467 (549)
.-........... ......-|+.|.|||++. +.++++|+|||||||+||-|+....||+....-
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------- 264 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------- 264 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---------
Confidence 4321111000000 001224589999999875 667899999999999999999999999865321
Q ss_pred HhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 468 SLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+++..+.-+..+.....|.+||+.||+.||.+||++-+++..+-.
T Consensus 265 ---------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 265 ---------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred ---------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 1233333333346778899999999999999999999999875533
No 162
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.2e-37 Score=314.96 Aligned_cols=248 Identities=23% Similarity=0.389 Sum_probs=193.3
Q ss_pred CCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
+|...+.||+|+||.||+|... ....+++|.+...... ...+.+|+.+++.++||||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4777889999999999999652 2357899988654322 3468889999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH---------------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCC
Q 008898 325 VYNLL-NGSLKQYLKQ---------------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSN 376 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~---------------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~N 376 (549)
++||+ +|+|.+++.. +++...+.++.|++.||.|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 99999 6899998853 45667789999999999999999 99999999999
Q ss_pred EEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCc
Q 008898 377 ILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTN 455 (549)
Q Consensus 377 ILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 455 (549)
||++++ +.++|+|||++......... .......++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 158 ill~~~-~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 158 VLVAEG-RKMKISDFGLSRDVYEEDSY---VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred EEEcCC-CcEEeccccccccccCccch---hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 999988 68999999998654322111 11123345678999999988889999999999999999998 99999654
Q ss_pred ccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 456 KANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 456 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.... +..+.. .+ ..... +......+.+++..|++.+|.+||++.++++.|++
T Consensus 234 ~~~~--~~~~~~----~~-----~~~~~----~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 234 APER--LFNLLK----TG-----YRMER----PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred CHHH--HHHHHh----CC-----CCCCC----CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 3221 111111 10 01111 12233567788999999999999999999998864
No 163
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-37 Score=315.62 Aligned_cols=251 Identities=25% Similarity=0.418 Sum_probs=198.6
Q ss_pred cCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
.+|...+.||+|+||.||++... ++..+++|.++..... .+.+.+|+.+++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35778889999999999999642 3457899988754432 3568899999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC
Q 008898 325 VYNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH 384 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 384 (549)
+|||+ +|+|.+++.. +++..++.++.||+.||.|||++ +|+||||||+|||++.+ +
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~-~ 160 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN-L 160 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC-C
Confidence 99999 7899999854 56778899999999999999999 99999999999999998 6
Q ss_pred ceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHH
Q 008898 385 HPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLV 463 (549)
Q Consensus 385 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~ 463 (549)
.++|+|||++........ ........|++.|+|||++.+..++.++|||||||++|||++ |..||....... ..
T Consensus 161 ~~~l~dfg~a~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~ 235 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDY---YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VI 235 (291)
T ss_pred cEEECCCCcccccCCCce---eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HH
Confidence 899999999865433211 111223456789999999999999999999999999999998 999987654321 11
Q ss_pred HHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 464 LWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 464 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
. .. ..+.... .....+..+.+++.+||..+|.+|||+++|++.|+...
T Consensus 236 ~---~~-~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 236 E---CI-TQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred H---HH-hCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 1 11 1111111 11223456889999999999999999999999887653
No 164
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.2e-37 Score=306.09 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=201.5
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
++|+..+.||+|+||.||++... +++.+++|.++.... .+++.+|+++++.++||||+++++++.++..+++++|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 57889999999999999999875 488999999975543 567899999999999999999999999999999999999
Q ss_pred CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 ~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
+++|.+++.. +++.....++.|+++||.|||+. +++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~-~~~~l~dfg~~~~~~~~~---- 153 (256)
T cd06612 82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEE-GQAKLADFGVSGQLTDTM---- 153 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCC-CcEEEcccccchhcccCc----
Confidence 5689999853 67888899999999999999999 99999999999999998 689999999986543321
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
.......|+..|+|||++.+..++.++|||||||++|+|++|+.||........... . .....+..
T Consensus 154 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-----~------~~~~~~~~-- 219 (256)
T cd06612 154 -AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-----I------PNKPPPTL-- 219 (256)
T ss_pred -cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-----h------ccCCCCCC--
Confidence 122234588899999999988999999999999999999999999976543221110 0 00000111
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..+......+.+++..|++.||.+|||+.++++ |+|+
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~-----~~~~ 256 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ-----HPFI 256 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc-----CCCC
Confidence 112233456788999999999999999999998 7875
No 165
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.8e-37 Score=305.57 Aligned_cols=252 Identities=23% Similarity=0.359 Sum_probs=201.6
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...+.||+|+||.||+|... +|+.+|+|.++.... ..+.+.+|++++++++|+||+++++++..++.++++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999874 799999998864321 2356889999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 327 NLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 327 e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
||+ +|+|.+++.. +++.....++.+++.||.|||+. +|+|+||+|+||+++.+ +.++|+|||++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~-~~~~l~d~~~~~~~~ 157 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITAT-GVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCC-CcEEEeccceeeecc
Confidence 999 6799998853 56778889999999999999999 99999999999999988 689999999986543
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
... .......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||....... ..+...... +.
T Consensus 158 ~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~-~~---- 224 (267)
T cd08224 158 SKT-----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---YSLCKKIEK-CD---- 224 (267)
T ss_pred CCC-----cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccH---HHHHhhhhc-CC----
Confidence 221 11224568899999999998889999999999999999999999996544221 111111110 10
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
............+.+++..|+..+|.+|||+.+|++.|++.+
T Consensus 225 ----~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 ----YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ----CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 001111234456788999999999999999999999987654
No 166
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-37 Score=312.18 Aligned_cols=251 Identities=26% Similarity=0.359 Sum_probs=195.5
Q ss_pred hcCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 322 (549)
+++|.+.+.||+|+||.||+|.+. .+..+|+|.++.... ....+.+|+.+++.++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 467889999999999999999774 357899998864432 234688999999999999999999999988899
Q ss_pred EEEEecc-CCCHHHHHHH----------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC--CceEEe
Q 008898 323 AIVYNLL-NGSLKQYLKQ----------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF--HHPQLS 389 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~----------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~--~~~kL~ 389 (549)
+++|||+ +|+|.+++.. +++..++.++.||+.||.|||+. +++|+||||+||+++.+. ..++|+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 9999999 7899999853 56777889999999999999999 999999999999998651 258999
Q ss_pred eeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHH
Q 008898 390 DFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARS 468 (549)
Q Consensus 390 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~ 468 (549)
|||++.......... ......+++.|+|||++.+..++.++|||||||++|||++ |..||....... + ...
T Consensus 162 dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~---~~~ 233 (277)
T cd05036 162 DFGMARDIYRASYYR---KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--V---MEF 233 (277)
T ss_pred cCccccccCCcccee---cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--H---HHH
Confidence 999987543221111 1112233568999999999999999999999999999997 999997654321 1 111
Q ss_pred hhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 469 LLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 469 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
...... . ..+...+..+.+++..|++.+|.+||++.+|++.|+.
T Consensus 234 ~~~~~~------~----~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 234 VTGGGR------L----DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHcCCc------C----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 111111 0 1122234567888999999999999999999998753
No 167
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.6e-37 Score=312.07 Aligned_cols=255 Identities=27% Similarity=0.378 Sum_probs=199.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHH-HhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVEL-LSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
++|++.+.||+|+||.||++.+ .+|+.||+|+++.... ....+..|+.+ ++.++||||+++++++..++..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 3688899999999999999987 5699999999976543 23456667665 667799999999999999999999999
Q ss_pred ccCCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 328 LLNGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 328 ~~~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|+.|+|.+++.. +++...+.++.||+.||.|||+++ +++||||||+||+++.+ +.+||+|||++......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRN-GQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCC-CCEEEeecccccccccc
Confidence 999999888853 567788899999999999999743 89999999999999998 68999999998654221
Q ss_pred cccccCccccccccCCcccccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMY----GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.......+.+.... .+
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~--- 223 (283)
T cd06617 158 ------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV-----EE--- 223 (283)
T ss_pred ------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH-----hc---
Confidence 11223468899999998864 4568899999999999999999999965433222221111 00
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
..+.+. .......+.+++..||..+|.+||++.++++ |+|+......
T Consensus 224 --~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~-----~~~~~~~~~~ 270 (283)
T cd06617 224 --PSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ-----HPFFELHLSK 270 (283)
T ss_pred --CCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhc-----Cchhhhcccc
Confidence 111111 1123456788899999999999999999999 8999887644
No 168
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.3e-37 Score=307.76 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=198.1
Q ss_pred hhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 249 HLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 249 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
..++++.....||+|+||.||+|.. .++..+|+|.+..... ..+.+.+|+.+++.++|+||+++++++..++.+++++
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3456677778999999999999976 5678999998875543 3456889999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH----h--chhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 327 NLL-NGSLKQYLKQ----L--KWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 327 e~~-~gsL~~~l~~----~--~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
||+ +++|.+++.. + +......++.||+.||.|||+. +|+||||||+||+++.+.+.++|+|||++.....
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 999 6799999864 2 5566778899999999999999 9999999999999987546899999999865432
Q ss_pred ccccccCccccccccCCccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGK--VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
.. .......|++.|+|||++.... ++.++|+|||||++|+|++|+.||........ ..+......
T Consensus 162 ~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~~~~------ 228 (268)
T cd06624 162 IN-----PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVGMFK------ 228 (268)
T ss_pred CC-----CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhhhhc------
Confidence 11 1122345889999999987654 78999999999999999999999965432211 111111000
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..+ .++......+.+++.+||..+|.+|||+.++++ |+|+
T Consensus 229 -~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~-----~~~~ 268 (268)
T cd06624 229 -IHP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ-----DPFL 268 (268)
T ss_pred -cCC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh-----CCCC
Confidence 011 122334456788899999999999999999999 7885
No 169
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.4e-37 Score=318.59 Aligned_cols=260 Identities=25% Similarity=0.301 Sum_probs=193.9
Q ss_pred CCceEccc--CceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 256 PKMLIGQG--GNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 256 ~~~~lG~G--~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
..++||+| +|++||++.. .+|+.+|+|.++..... ...+.+|+.+++.++||||++++++|..++.++++|||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35679999 7889999976 67999999999754322 235678999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 330 -NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 330 -~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+|+|.+++.. +++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~-~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVD-GKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecC-CcEEEcccchhhcccccccc
Confidence 6799998853 66788889999999999999999 99999999999999998 68999999865332111000
Q ss_pred --ccCccccccccCCcccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 404 --SENVKPVNVVGTFGYLAPEYMMY--GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 404 --~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
..........++..|+|||++.+ ..++.++|||||||++|||++|+.||.............. +......
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~------~~~~~~~ 231 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN------GTVPCLL 231 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc------CCccccc
Confidence 00011122356788999999976 4589999999999999999999999975432221111100 0000000
Q ss_pred C-------------------C-----------------cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 480 D-------------------P-----------------QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 480 d-------------------~-----------------~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
+ . .....+.......+.+++..||..||.+|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~----- 306 (327)
T cd08227 232 DTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN----- 306 (327)
T ss_pred cccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc-----
Confidence 0 0 0001122233457888999999999999999999998
Q ss_pred chhhhhh
Q 008898 524 DYWLKMK 530 (549)
Q Consensus 524 ~~w~~~~ 530 (549)
|+||+..
T Consensus 307 ~p~f~~~ 313 (327)
T cd08227 307 HSFFKQI 313 (327)
T ss_pred Chhhhhc
Confidence 8999653
No 170
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.5e-37 Score=313.96 Aligned_cols=258 Identities=22% Similarity=0.359 Sum_probs=200.2
Q ss_pred hcCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 322 (549)
.++|++.+.||+|+||.||+|... .+..+|+|.++..... ...+.+|+.+++.++||||+++++++.+++..
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 467999999999999999998643 2458999988654322 23577899999999999999999999999999
Q ss_pred EEEEecc-CCCHHHHHHHh-------------chhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEE
Q 008898 323 AIVYNLL-NGSLKQYLKQL-------------KWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQL 388 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~~-------------~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL 388 (549)
+++|||+ +|+|.+++... .+.....++.|++.||.|||++ +|+||||||+|||++++ +.++|
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~-~~~~L 160 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD-FTVKI 160 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC-CcEEE
Confidence 9999999 78999999652 2345678999999999999999 99999999999999998 68999
Q ss_pred eeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHH
Q 008898 389 SDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWAR 467 (549)
Q Consensus 389 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~ 467 (549)
+|||++.......... ......++..|+|||.+.++.++.++|+|||||++|||++ |..||......+ . ..
T Consensus 161 ~Dfg~~~~~~~~~~~~---~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~--~---~~ 232 (288)
T cd05061 161 GDFGMTRDIYETDYYR---KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ--V---LK 232 (288)
T ss_pred CcCCcccccccccccc---ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH--H---HH
Confidence 9999986543221111 1112345678999999998899999999999999999998 788886543221 1 11
Q ss_pred HhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC-Cchhhhhh
Q 008898 468 SLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE-PDYWLKMK 530 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~-~~~w~~~~ 530 (549)
.....+.. ..+......+.+++..|++.||.+|||+.++++.|+. .++||+..
T Consensus 233 ~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 233 FVMDGGYL----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHcCCCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 11111110 0112234678899999999999999999999999886 45777643
No 171
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.8e-37 Score=314.40 Aligned_cols=259 Identities=27% Similarity=0.371 Sum_probs=200.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+..+.||+|+||.||++.+ .++..+|+|.++.... ...++.+|++++++++||||+++++++.+++.++++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688999999999999999977 4688999999875432 224578999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+ +|+|.+++.. +++.....++.|+++||.|||+.+ +++|+||||+|||++.+ +.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~---- 153 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS---- 153 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecC-CcEEEccCCCccccccc----
Confidence 9 6799999864 567778899999999999999732 89999999999999998 68999999998543221
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccc---------
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLC--------- 475 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--------- 475 (549)
......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||....... ...+..........
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE--LEAMFGRPVSEGEAKESHRPVSG 228 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh--HHHhhcCccccccccCCcccccC
Confidence 1234578999999999988889999999999999999999999996543211 11111100000000
Q ss_pred ---------------cccc---CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 476 ---------------ERLI---DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 476 ---------------~~~~---d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
.... .+... .......+.+++.+||..+|.+|||+.++++ |+|+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~-----~~~~~~~ 293 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLP---SGAFSDEFQDFVDKCLKKNPKERADLKELTK-----HPFIKRA 293 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCc---CcccCHHHHHHHHHHccCChhhCcCHHHHhc-----Chhhhhc
Confidence 0000 00000 0113345788999999999999999999999 8999653
No 172
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.4e-38 Score=325.31 Aligned_cols=245 Identities=22% Similarity=0.256 Sum_probs=188.6
Q ss_pred EcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcC---CCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 260 IGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSI---KHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 260 lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
||+|+||.||++.+ .+|+.+|+|++..... .......|..++..+ +||||+++++++.+++.++++|||+ +
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999987 5689999999965321 112345677777655 6999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|.+++.. +++.....++.||++||.|||++ +|+||||||+|||++.+ +.++|+|||++..... ...
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~-~~~kl~Dfg~a~~~~~-----~~~ 151 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDAT-GHIALCDFGLSKANLT-----DNK 151 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCC-CCEEEecCCcCcCCCC-----CCC
Confidence 799888854 67788889999999999999999 99999999999999998 6899999999854222 112
Q ss_pred cccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 408 KPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||....... ....+... . ..+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~-----~~~~i~~~-~------~~~~~- 218 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ-----MYRNIAFG-K------VRFPK- 218 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH-----HHHHHHcC-C------CCCCC-
Confidence 23356799999999998765 48999999999999999999999997654221 11111111 0 01111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC----CHHHHHHHhcCCchhhhhhhHH
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRP----TMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RP----s~~evl~~L~~~~~w~~~~~~~ 533 (549)
......+.++++.||..||.+|| ++.++++ |+|++.....
T Consensus 219 --~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~-----h~~~~~~~~~ 262 (330)
T cd05586 219 --NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE-----HPFFADIDWD 262 (330)
T ss_pred --ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc-----CccccCCCHH
Confidence 11234567788999999999998 5777776 8998765543
No 173
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.1e-37 Score=308.52 Aligned_cols=251 Identities=23% Similarity=0.382 Sum_probs=199.8
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...+.||+|+||.||++.. .+++.+|||.+..... ...++.+|+.+++.++||||+++++++.+++.++++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3678888999999999999986 5799999998865322 2246788999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 327 NLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 327 e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
||+ +++|.+++.. +++...+.++.||+.||.|||++ +++|+||||+||+++.+ +.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~ 157 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITAT-GVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCC-CCEEECcchhhhccc
Confidence 999 5689988853 56777889999999999999999 99999999999999988 689999999986543
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
... .......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.......... ..... ..
T Consensus 158 ~~~-----~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~------~~ 223 (267)
T cd08229 158 SKT-----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL---CKKIE------QC 223 (267)
T ss_pred cCC-----cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH---hhhhh------cC
Confidence 221 11224568999999999998889999999999999999999999997544322111 11111 11
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
..+.. ........+.+++.+|+..||.+|||+.+|++.+.+-
T Consensus 224 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 224 DYPPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 11111 1123455688889999999999999999999988654
No 174
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.4e-37 Score=313.15 Aligned_cols=254 Identities=25% Similarity=0.382 Sum_probs=204.4
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
..+|...+.||+|+||.||++.. .+++.+|+|.+...... .+.+.+|+.+++.++||||+++++++..++.++++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 46799999999999999999986 57999999999765433 35578899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 329 L-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 329 ~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
+ +++|.+++.. +++.+...++.|++.||.|||+. +++||||||+|||++.+ +.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~-~~~~l~Dfg~~~~~~~~~---- 169 (297)
T cd06656 98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQ---- 169 (297)
T ss_pred cCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC-CCEEECcCccceEccCCc----
Confidence 9 7799999864 66778889999999999999999 99999999999999988 689999999986533221
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||............ ........
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~-------------~~~~~~~~ 235 (297)
T cd06656 170 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------------ATNGTPEL 235 (297)
T ss_pred -cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee-------------ccCCCCCC
Confidence 1122346889999999999888999999999999999999999999765432211100 00000001
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
..+......+.+++..||..+|.+||++.++++ |+|+....
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~-----~~~~~~~~ 276 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ-----HPFLKLAK 276 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc-----Cchhcccc
Confidence 112233456788899999999999999999999 89987554
No 175
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.8e-37 Score=312.39 Aligned_cols=259 Identities=26% Similarity=0.365 Sum_probs=200.2
Q ss_pred cCHHHHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEE--
Q 008898 242 FTSQELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCH-- 317 (549)
Q Consensus 242 ~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~-- 317 (549)
+..+.+..+.++|++.+.||+|+||.||++.. .+++.+|+|+++........+..|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 33455566788999999999999999999977 5688999999876554456788899999999 6999999999873
Q ss_pred ---cCCeEEEEEecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCce
Q 008898 318 ---SKEMYAIVYNLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHP 386 (549)
Q Consensus 318 ---~~~~~~lv~e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~ 386 (549)
.++.++++|||+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+||+++.+ +.+
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~-~~~ 163 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE-GGV 163 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC-CCE
Confidence 446799999999 6789888742 55667788999999999999999 99999999999999998 689
Q ss_pred EEeeeccccccccccccccCccccccccCCcccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhh
Q 008898 387 QLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY-----GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRES 461 (549)
Q Consensus 387 kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~ 461 (549)
+|+|||++....... .......|++.|+|||++.. ..++.++|||||||++|||++|+.||........
T Consensus 164 kl~dfg~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~- 237 (286)
T cd06638 164 KLVDFGVSAQLTSTR-----LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA- 237 (286)
T ss_pred EEccCCceeecccCC-----CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-
Confidence 999999986543211 12234468999999998753 4578999999999999999999999976543211
Q ss_pred HHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 462 LVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 462 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+ .. . .........++ ......+.+++.+||..||++|||+.++++ |.|+
T Consensus 238 ~---~~-~-~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~-----~~~~ 286 (286)
T cd06638 238 L---FK-I-PRNPPPTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ-----HVFI 286 (286)
T ss_pred H---hh-c-cccCCCcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhh-----cccC
Confidence 1 10 0 00000111111 112345778899999999999999999998 6664
No 176
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.3e-37 Score=311.63 Aligned_cols=260 Identities=28% Similarity=0.388 Sum_probs=203.7
Q ss_pred cCHHHHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcC
Q 008898 242 FTSQELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCHSK 319 (549)
Q Consensus 242 ~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 319 (549)
++.+++..++++|...+.||+|+||.||++.. .+++.+|+|++.........+.+|+.+++.+ +|||++++++++...
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 44556667788999999999999999999977 5688999999976554556788899999998 799999999998643
Q ss_pred -----CeEEEEEecc-CCCHHHHHH-------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCce
Q 008898 320 -----EMYAIVYNLL-NGSLKQYLK-------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHP 386 (549)
Q Consensus 320 -----~~~~lv~e~~-~gsL~~~l~-------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~ 386 (549)
+.+++++||+ +|+|.++++ .+++.....++.|++.||.|||+. +++|+||||+||+++.+ +.+
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~-~~~ 167 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE-GGV 167 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC-CCE
Confidence 3689999999 679988874 257778889999999999999999 99999999999999988 689
Q ss_pred EEeeeccccccccccccccCccccccccCCccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhh
Q 008898 387 QLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-----KVDEKIDVYSYGVVLLELITGKEAIQTNKANRES 461 (549)
Q Consensus 387 kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~ 461 (549)
+|+|||++........ ......|++.|+|||.+... .++.++|||||||++|||++|+.||........
T Consensus 168 kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~- 241 (291)
T cd06639 168 KLVDFGVSAQLTSTRL-----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT- 241 (291)
T ss_pred EEeecccchhcccccc-----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-
Confidence 9999999865432211 11234688999999988643 368899999999999999999999976543221
Q ss_pred HHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 462 LVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 462 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
+..+. .+....+.+ .......+.+++.+|+..+|++||++.++++ |+||+
T Consensus 242 ~~~~~-----~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~-----~~~~~ 291 (291)
T cd06639 242 LFKIP-----RNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE-----HPFIK 291 (291)
T ss_pred HHHHh-----cCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc-----CcccC
Confidence 11111 011111111 1223346888999999999999999999999 88874
No 177
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.5e-37 Score=311.36 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=196.8
Q ss_pred hcCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 322 (549)
.++|...+.||+|+||.||++... ++..+|+|.+...... ...+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357888999999999999999653 2468999998654322 24678899999999999999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH-------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEE
Q 008898 323 AIVYNLL-NGSLKQYLKQ-------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQL 388 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~-------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL 388 (549)
+++|||+ +|+|.+++.. +.+...+.++.|++.||.|||+. +|+||||||+|||++.+ +.++|
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~-~~~kl 160 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAED-LTVKI 160 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCC-CCEEE
Confidence 9999999 6899999854 35567788999999999999999 99999999999999998 68999
Q ss_pred eeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHH
Q 008898 389 SDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWAR 467 (549)
Q Consensus 389 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~ 467 (549)
+|||++......... .......++..|+|||.+.++.++.++|||||||++|||++ |..||....... ...
T Consensus 161 ~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~--- 232 (277)
T cd05032 161 GDFGMTRDIYETDYY---RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--VLK--- 232 (277)
T ss_pred CCcccchhhccCccc---ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--HHH---
Confidence 999998654332211 11123456789999999998889999999999999999998 899987544321 111
Q ss_pred HhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 468 SLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
... .+.. +.. +...+..+.+++..||..+|.+|||+.++++.|+
T Consensus 233 ~~~-~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 FVI-DGGH-----LDL----PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHh-cCCC-----CCC----CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111 1110 111 1122557888999999999999999999999875
No 178
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2e-37 Score=319.95 Aligned_cols=260 Identities=20% Similarity=0.238 Sum_probs=196.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...+.||+|+||.||++.. .+++.+|+|++.+.. .....+.+|+.++..++|+||+++++++.+.+.+++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 3688899999999999999987 457899999996432 11234678999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 327 NLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 327 e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
||+ +|+|.+++.+ +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~-~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCC-CCEEEeecchheecccCC
Confidence 998 7899999965 56677888999999999999999 99999999999999988 689999999985432211
Q ss_pred ccccCccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
.......+||+.|+|||++. .+.++.++|||||||++|||++|+.||........ ...+.....
T Consensus 157 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~-----~~~i~~~~~-- 225 (332)
T cd05623 157 ----TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-----YGKIMNHKE-- 225 (332)
T ss_pred ----cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH-----HHHHhCCCc--
Confidence 11122357999999999986 34588999999999999999999999976543211 111111110
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhccc--CCCCCCCHHHHHHHhcCCchhhhhhhHHHH
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLH--SSSRRPTMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~--dP~~RPs~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
...-+.... .....+.+++++|+.. ++..||++.++++ |+||........
T Consensus 226 ~~~~p~~~~----~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~-----h~~f~~~~~~~~ 277 (332)
T cd05623 226 RFQFPAQVT----DVSEDAKDLIRRLICSREHRLGQNGIEDFKQ-----HPFFTGIDWDNI 277 (332)
T ss_pred cccCCCccc----cCCHHHHHHHHHHccChhhhcCCCCHHHHhC-----CCCcCCCCHHHH
Confidence 010111111 2234456667777654 4444789999998 899987654433
No 179
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.9e-37 Score=315.84 Aligned_cols=251 Identities=25% Similarity=0.380 Sum_probs=197.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe------cCCcEEEEEEeecCCcC--HHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH------VDGQVAAVKVLKCTNWS--EEEVLREVELLSSI-KHENIVRIIGYCHSKEM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 321 (549)
.++|...+.||+|+||.||++.. .++..+|+|.++..... .+.+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 35788999999999999999863 23558999998754322 24678999999999 79999999999999999
Q ss_pred EEEEEecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 322 YAIVYNLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
.+++|||+ +|+|.+++.. +++.+...++.|++.||.|||++ +|+|+||||+|||++.+ +.++|+|||++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~-~~~~l~dfg~~~ 189 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHG-KIVKICDFGLAR 189 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCC-CeEEECCCcccc
Confidence 99999998 6899999864 67888899999999999999999 99999999999999988 689999999986
Q ss_pred ccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccc
Q 008898 396 VHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGL 474 (549)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~ 474 (549)
....... ........+++.|+|||.+.++.++.++|||||||++|||++ |..||........ +.... ..+.
T Consensus 190 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~~~~----~~~~ 261 (302)
T cd05055 190 DIMNDSN---YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKLI----KEGY 261 (302)
T ss_pred cccCCCc---eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HHHHH----HcCC
Confidence 5432111 011123346788999999999999999999999999999998 9999876543221 11111 1110
Q ss_pred cccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 475 CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 475 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+.. .......+.+++.+|+..+|++|||+.++++.|++
T Consensus 262 -----~~~~----~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 262 -----RMAQ----PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred -----cCCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 0011 11123468889999999999999999999998864
No 180
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2e-37 Score=311.69 Aligned_cols=257 Identities=26% Similarity=0.395 Sum_probs=200.2
Q ss_pred CHHHHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEE---
Q 008898 243 TSQELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCH--- 317 (549)
Q Consensus 243 ~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~--- 317 (549)
+..++....+.|+..+.||.|+||.||+|.+ .+++.+|+|++........++..|+.+++.+ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 3344445567899999999999999999987 5689999999876655556788899999988 6999999999884
Q ss_pred ---cCCeEEEEEecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEE
Q 008898 318 ---SKEMYAIVYNLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQL 388 (549)
Q Consensus 318 ---~~~~~~lv~e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL 388 (549)
..+.++++|||+ +|+|.+++.. +++.....++.||++||.|||+. +|+|+||+|+||+++++ +.++|
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~-~~~~l 162 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN-AEVKL 162 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC-CCEEE
Confidence 346889999999 5689998864 45666788999999999999999 99999999999999988 68999
Q ss_pred eeeccccccccccccccCccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHH
Q 008898 389 SDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLV 463 (549)
Q Consensus 389 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~ 463 (549)
+|||++....... .......|++.|+|||.+. ...++.++|+|||||++|||++|..||...........
T Consensus 163 ~dfg~~~~~~~~~-----~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 163 VDFGVSAQLDRTV-----GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred eeCcchhhhhccc-----cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 9999986433211 1223457899999999876 34688899999999999999999999975443211110
Q ss_pred HHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 464 LWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 464 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
. .....+. .........+.+++..||..||.+||++.+|++ |+|+
T Consensus 238 -----~------~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~-----~~~~ 282 (282)
T cd06636 238 -----I------PRNPPPK---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK-----HPFI 282 (282)
T ss_pred -----H------hhCCCCC---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc-----CCCC
Confidence 0 0000111 111223456888999999999999999999998 7885
No 181
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-37 Score=321.19 Aligned_cols=259 Identities=20% Similarity=0.265 Sum_probs=196.8
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|.+.+.||+|+||.||++.. .+++.+|+|+++... .....+.+|+.++..++|+||+++++++.+++.++++|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4788999999999999999987 468899999997532 12234678999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 327 NLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 327 e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
||+ +|+|.+++.. +++.....++.|++.||.|||++ +|+||||||+|||++.+ +.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMN-GHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCC-CCEEEEeccceeeccCCC
Confidence 999 7899999964 46677788999999999999999 99999999999999988 689999999986543221
Q ss_pred ccccCccccccccCCcccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMY-----GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
. .......||+.|+|||++.+ +.++.++|||||||++|||++|+.||........ . ..+.....
T Consensus 157 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~----~~i~~~~~-- 225 (331)
T cd05624 157 T----VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-Y----GKIMNHEE-- 225 (331)
T ss_pred c----eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH-H----HHHHcCCC--
Confidence 1 11223579999999999875 5678999999999999999999999976543211 1 11111100
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSR--RPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
.. .++.. ..+..+.+.+++.+|+..++.+ |+++.++++ |+||.......
T Consensus 226 ~~---~~p~~-~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~-----h~~f~~~~~~~ 276 (331)
T cd05624 226 RF---QFPSH-ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK-----HAFFEGIDWEN 276 (331)
T ss_pred cc---cCCCc-cccCCHHHHHHHHHHccCchhhcCCCCHHHHhc-----CCCcCCCCHHH
Confidence 00 01111 1123455677778888765544 578999987 88887654433
No 182
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.9e-37 Score=306.40 Aligned_cols=242 Identities=26% Similarity=0.417 Sum_probs=189.0
Q ss_pred eEcccCceEEEEEEe---cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 259 LIGQGGNSKVYRTNH---VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~---~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
.||+|+||.||+|.. .++..+|+|+++..... .+++.+|+.+++.+.||||+++++++.. +.++++|||+ +|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 489999999999954 35789999998755432 3568889999999999999999999864 5678899998 57
Q ss_pred CHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcc
Q 008898 332 SLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVK 408 (549)
Q Consensus 332 sL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~ 408 (549)
+|.+++.. +++.....++.|++.||.|||++ +|+||||||+||+++.+ +.++|+|||++.......... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~-~~~kl~Dfg~~~~~~~~~~~~--~~ 154 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQ-HYAKISDFGLSKALGADENYY--KA 154 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCC-CeEEECCCccccccCCCCCee--ee
Confidence 89999854 67788899999999999999999 99999999999999998 689999999986543322111 11
Q ss_pred ccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 409 PVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 409 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....+++.|+|||.+....++.++|+|||||++|||++ |..||....... + ...+. .+. .+..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~---~~~i~-~~~-----~~~~---- 219 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE--V---TQMIE-SGE-----RMEC---- 219 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--H---HHHHH-CCC-----CCCC----
Confidence 112234678999999988889999999999999999998 999997653321 1 11111 111 0111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
+...+..+.+++..||+.||++||++.+|.+.|++
T Consensus 220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 12234567889999999999999999999998875
No 183
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=311.59 Aligned_cols=249 Identities=26% Similarity=0.368 Sum_probs=209.3
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
|.+...||+|+||.||++.| ..|+.+|+|.+..+. +..++..|+.||++++.|++|++||.+..+..+++||||| .|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 45566799999999999977 569999999987543 5678999999999999999999999999999999999999 68
Q ss_pred CHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 332 SLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 332 sL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
+..+.++ .+.+.++..++...+.||+|||.. .-||||||..|||++.+ |++||+|||.|-.. ...-.
T Consensus 114 SiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~-G~AKLADFGVAGQL-----TDTMA 184 (502)
T KOG0574|consen 114 SISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTD-GIAKLADFGVAGQL-----TDTMA 184 (502)
T ss_pred cHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEccc-chhhhhhccccchh-----hhhHH
Confidence 9999984 378888999999999999999999 88999999999999999 79999999998432 23334
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
+..++.|||.|||||++..-+|+.++||||||+...||.-|++|+..-.+....+. +.. .|...-.-
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM------IPT-------~PPPTF~K 251 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM------IPT-------KPPPTFKK 251 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe------ccC-------CCCCCCCC
Confidence 56688999999999999999999999999999999999999999988776443221 001 11111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
+......+.++++.||-.+|++|-|+.++++ |+|.+..
T Consensus 252 PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~-----H~FiknA 289 (502)
T KOG0574|consen 252 PEEWSSEFNDFIRSCLIKKPEERKTALRLCE-----HTFIKNA 289 (502)
T ss_pred hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh-----hhhhcCC
Confidence 4566778899999999999999999999998 7776543
No 184
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.1e-37 Score=306.38 Aligned_cols=253 Identities=26% Similarity=0.374 Sum_probs=199.4
Q ss_pred CCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC-------HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS-------EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
+|...+.||+|+||.||+|...+|+.+|+|.++..... ...+.+|+++++.++|+||+++++++.+.+.++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47788899999999999998878999999998754321 13477899999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+||+ +|+|.+++.+ +++.....++.|++.||.|||+. +|+|+||+|+||+++++ +.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPN-GIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCC-CeEEeccchhhHhhhhcc
Confidence 9999 6799999865 57777888999999999999999 99999999999999988 689999999986542211
Q ss_pred c-cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 402 Q-VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 402 ~-~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
. ...........|++.|+|||++.+..++.++|+|||||++|+|++|..||.......... .. .. .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~-~~---~~-----~~~~~ 227 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF-YI---GA-----HRGLM 227 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH-Hh---hh-----ccCCC
Confidence 0 011112234568999999999998889999999999999999999999997543221111 00 00 00111
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+.+... ....+.+++++||..+|.+||++.++++ |+||
T Consensus 228 ~~~~~~----~~~~~~~~i~~~l~~~p~~Rp~~~~~l~-----~~~~ 265 (265)
T cd06631 228 PRLPDS----FSAAAIDFVTSCLTRDQHERPSALQLLR-----HDFL 265 (265)
T ss_pred CCCCCC----CCHHHHHHHHHHhcCCcccCCCHHHHhc-----CCCC
Confidence 222222 3455778889999999999999999998 7875
No 185
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.4e-37 Score=310.10 Aligned_cols=263 Identities=23% Similarity=0.312 Sum_probs=198.6
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
+++|...+.||+|+||.||+|.. .+|+.+|+|++..... ....+.+|+.+++.++|+||+++++++..++..++++|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 56899999999999999999976 5689999999865432 22467789999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.++|.+++.. +.+.....++.|++.||.|||+. +|+|+||||+|||++.+ +.++|+|||++......
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~--- 156 (291)
T cd07870 84 YMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYL-GELKLADFGLARAKSIP--- 156 (291)
T ss_pred cccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCC-CcEEEeccccccccCCC---
Confidence 999998887743 45677888999999999999999 99999999999999988 68999999998643221
Q ss_pred ccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc-----------
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS----------- 471 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~----------- 471 (549)
........+++.|+|||.+.+. .++.++|||||||++|+|++|..||.......+.+.........
T Consensus 157 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 157 --SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred --CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 1112234578999999998764 57899999999999999999999998655432322221110000
Q ss_pred -ccccccccCCcccccCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 472 -SGLCERLIDPQLNEEYN-----REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 472 -~~~~~~~~d~~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
......+.......... ......+.+++.+|+..||.+|||+.+++. |+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~-----h~~~ 291 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL-----HPYF 291 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc-----CCCC
Confidence 00000000000000000 011346778899999999999999999998 7886
No 186
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3e-37 Score=308.01 Aligned_cols=247 Identities=21% Similarity=0.334 Sum_probs=191.3
Q ss_pred CCCCceEcccCceEEEEEEec-C---CcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCe-----
Q 008898 254 FSPKMLIGQGGNSKVYRTNHV-D---GQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEM----- 321 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~-~---g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~----- 321 (549)
|.+.+.||+|+||.||+|... + +..+|+|.++..... ...+.+|+++++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567788999999999999763 2 368999999765433 2467899999999999999999998865543
Q ss_pred -EEEEEecc-CCCHHHHHH---------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEee
Q 008898 322 -YAIVYNLL-NGSLKQYLK---------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSD 390 (549)
Q Consensus 322 -~~lv~e~~-~gsL~~~l~---------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~D 390 (549)
.++++||+ +|+|..++. .+++.....++.|++.||.|||+. +++||||||+||+++++ +.+||+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~-~~~kl~d 156 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLRED-MTVCVAD 156 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCC-CeEEECC
Confidence 78999998 789988873 256677888999999999999999 99999999999999998 6899999
Q ss_pred eccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHh
Q 008898 391 FGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSL 469 (549)
Q Consensus 391 FGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~ 469 (549)
||++.......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||......+ + ....
T Consensus 157 fg~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--~---~~~~ 228 (273)
T cd05035 157 FGLSKKIYSGDYYR---QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--I---YDYL 228 (273)
T ss_pred ccceeecccccccc---ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--H---HHHH
Confidence 99987544322111 1112235678999999988889999999999999999999 889886544221 1 1111
Q ss_pred hcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 470 LSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 470 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..... ... +......+.+++.+|++.||.+|||+.++++.|++
T Consensus 229 ~~~~~------~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 229 RHGNR------LKQ----PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HcCCC------CCC----CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11110 111 22334568888899999999999999999998864
No 187
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.6e-37 Score=306.15 Aligned_cols=251 Identities=25% Similarity=0.392 Sum_probs=198.4
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----------HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----------EEEVLREVELLSSIKHENIVRIIGYCHSKEM 321 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 321 (549)
+|.....||+|+||.||+|.. .+++.+|+|.+...... .+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999999976 56889999988654321 1347789999999999999999999999999
Q ss_pred EEEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 322 YAIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
.++++||+ +++|.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++++ +.++|+|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~-~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNK-GGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCC-CCEEecccCCCccc
Confidence 99999999 6689999965 66777888999999999999999 99999999999999988 68999999998665
Q ss_pred cccccc-ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 398 HQSHQV-SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 398 ~~~~~~-~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
...... ..........|++.|+|||.+.+..++.++|+|||||++|+|++|..||.......... .. .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~------~ 225 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF-----KI------G 225 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH-----HH------h
Confidence 421111 11111223568899999999998889999999999999999999999997653321110 00 0
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
....+.. +......+.+++.+||+.||.+||++.++++ |+||
T Consensus 226 ~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~-----~~~~ 267 (267)
T cd06628 226 ENASPEI----PSNISSEAIDFLEKTFEIDHNKRPTAAELLK-----HPFL 267 (267)
T ss_pred ccCCCcC----CcccCHHHHHHHHHHccCCchhCcCHHHHhh-----CCCC
Confidence 1111222 2234456788889999999999999999998 7775
No 188
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.2e-37 Score=311.63 Aligned_cols=262 Identities=23% Similarity=0.354 Sum_probs=197.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+..+.||+|+||.||++.. .+++.||+|.+..... ....+.+|+++++.++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 5788999999999999999977 4689999999875432 224567899999999999999999999999999999999
Q ss_pred cCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+.++|.+++.. +++.....++.|+++||.|||+. +|+||||||+||+++.+ +.++|+|||++......
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~---- 156 (291)
T cd07844 85 LDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISER-GELKLADFGLARAKSVP---- 156 (291)
T ss_pred CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCC-CCEEECccccccccCCC----
Confidence 99999998854 56777888999999999999999 99999999999999998 68999999998543211
Q ss_pred cCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--ccccc----
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--GLCER---- 477 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~---- 477 (549)
........+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.......+.+......+... .....
T Consensus 157 -~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 157 -SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred -CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 111123356889999999875 4588999999999999999999999976543222221111111000 00000
Q ss_pred ---------cc-CCcccccCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 478 ---------LI-DPQLNEEYN-REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 478 ---------~~-d~~l~~~~~-~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.. ...+..... ......+.+++..|+..+|.+|||+.++++ |+||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~-----~~~f 291 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK-----HPYF 291 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc-----CCCC
Confidence 00 000000000 001145678899999999999999999998 7886
No 189
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.1e-37 Score=312.80 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=193.7
Q ss_pred cCCCCCceEcccCceEEEEEEecC---------------CcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVD---------------GQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIG 314 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~---------------g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~ 314 (549)
++|++.+.||+|+||.||++...+ ...+|+|.++.... ....+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 478899999999999999986532 23589999875432 2346889999999999999999999
Q ss_pred EEEcCCeEEEEEecc-CCCHHHHHHH---------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEE
Q 008898 315 YCHSKEMYAIVYNLL-NGSLKQYLKQ---------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNIL 378 (549)
Q Consensus 315 ~~~~~~~~~lv~e~~-~gsL~~~l~~---------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NIL 378 (549)
++...+..+++|||+ +++|.+++.. +.+...+.++.|++.||.|||+. +++|+||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 999999999999999 6799998843 35667788999999999999999 9999999999999
Q ss_pred EecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCcc
Q 008898 379 LSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT--GKEAIQTNK 456 (549)
Q Consensus 379 l~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt--G~~p~~~~~ 456 (549)
++++ +.+||+|||++........ ........+++.|+|||++.++.++.++|||||||++|+|++ |..||....
T Consensus 162 l~~~-~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 162 VGNH-YTIKIADFGMSRNLYSGDY---YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EcCC-CcEEecccccccccccCcc---eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 9988 6899999999865432211 111122345778999999999999999999999999999988 556776543
Q ss_pred cchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 457 ANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 457 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..+ ............+...... .+...+..+.+++.+|+..||.+||++.+|++.|++
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 DEQ-VIENTGEFFRNQGRQIYLS-------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred hHH-HHHHHHHhhhhccccccCC-------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 221 1111111111011100000 111223578899999999999999999999998863
No 190
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-37 Score=314.97 Aligned_cols=250 Identities=26% Similarity=0.432 Sum_probs=196.1
Q ss_pred hcCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCe
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSI-KHENIVRIIGYCHSKEM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 321 (549)
.++|+..+.||+|+||.||++... +...+|+|.+...... ..++.+|+++++.+ +|+||+++++++..++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 457888999999999999999763 2368999998754322 24578899999999 79999999999999999
Q ss_pred EEEEEecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEec
Q 008898 322 YAIVYNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSE 381 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~ 381 (549)
++++|||+ +|+|.+++.. +++...+.++.|++.||.|||+. +|+||||||+|||++.
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 99999998 7899999853 56677889999999999999999 9999999999999998
Q ss_pred CCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchh
Q 008898 382 NFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRE 460 (549)
Q Consensus 382 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~ 460 (549)
+ +.++|+|||++.......... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+.
T Consensus 168 ~-~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 243 (293)
T cd05053 168 D-HVMKIADFGLARDIHHIDYYR---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 243 (293)
T ss_pred C-CeEEeCcccccccccccccee---ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH
Confidence 8 689999999987544321111 1112235678999999998899999999999999999998 9999875543221
Q ss_pred hHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 461 SLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 461 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. ... ..+. ....+......+.+++.+|+..||.+|||+.++++.|+.
T Consensus 244 --~---~~~-~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 244 --F---KLL-KEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred --H---HHH-HcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 1 111 1110 001122334568889999999999999999999998764
No 191
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.8e-37 Score=309.77 Aligned_cols=248 Identities=25% Similarity=0.394 Sum_probs=189.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCc----EEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQ----VAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
++|+..+.||+|+||.||+|.. .+++ .+++|.+..... ...++..|+.+++.+.||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~-~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA-SLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-ccEE
Confidence 4688889999999999999976 3454 477777753321 224567788899999999999999998654 4566
Q ss_pred EEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
++||+ +|+|.+++.. +++.....++.||+.||.|||+. +++||||||+|||++++ +.+||+|||++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~-~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSD-SIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCC-CcEEEcCCccceeccC
Confidence 77777 7999999954 56788899999999999999999 99999999999999998 6899999999875433
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.. .........++..|+|||.+.++.++.++|||||||++|||++ |..||....... ...+ ...+. ..
T Consensus 162 ~~---~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~----~~~~~--~~ 230 (279)
T cd05111 162 DD---KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDL----LEKGE--RL 230 (279)
T ss_pred CC---cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH----HHCCC--cC
Confidence 21 1112224457788999999999999999999999999999998 999997654321 1111 11111 11
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..+. .+...+..++..|+..||.+|||+.++++.|..
T Consensus 231 ~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~ 267 (279)
T cd05111 231 AQPQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTR 267 (279)
T ss_pred CCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 1111 123446778899999999999999999987644
No 192
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.3e-37 Score=304.62 Aligned_cols=243 Identities=26% Similarity=0.393 Sum_probs=198.3
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++|+..+.||.|+||.||++... |+.+|+|.++......+.+.+|+.+++.++|+||+++++++...+..+++|||+ +
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 47888999999999999999764 788999999866554567889999999999999999999999899999999999 5
Q ss_pred CCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 GSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
++|.+++.. +++.....++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||.+.......
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~-~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSED-LVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCC-CCEEEccccccccccccc----
Confidence 799999853 67888999999999999999999 99999999999999998 689999999986542211
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
....++..|+|||.+..+.++.++||||||+++|||++ |..||....... +.. ... .+. ...
T Consensus 157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~---~~~-~~~-----~~~-- 219 (256)
T cd05039 157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP---HVE-KGY-----RME-- 219 (256)
T ss_pred ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHH---HHh-cCC-----CCC--
Confidence 12234567999999998889999999999999999997 999987654321 111 111 110 011
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+...+..+.+++.+|+..+|.+||++.++++.|+.
T Consensus 220 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 --APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred --CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 112234567888999999999999999999998864
No 193
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.3e-37 Score=306.54 Aligned_cols=249 Identities=27% Similarity=0.386 Sum_probs=195.2
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
.++|++.+.||+|+||.||+|.. .+++.+|+|++..... ....+.+|+.+++.++||||+++++++..++.+++++||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35799999999999999999986 5788999999975432 234577899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+||+++.+ +.++|+|||++......
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~-~~~~l~dfg~~~~~~~~---- 159 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDN-GDVKLADFGVAAKITAT---- 159 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCC-CCEEECcCccceeeccc----
Confidence 9 5789998853 57778888999999999999999 99999999999999988 68999999998654321
Q ss_pred cCccccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 405 ENVKPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
........|++.|+|||.+. ...++.++|+|||||++|||++|+.||.......... . ... .....+
T Consensus 160 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-~-----~~~---~~~~~~ 229 (267)
T cd06646 160 -IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-L-----MSK---SNFQPP 229 (267)
T ss_pred -ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-e-----eec---CCCCCC
Confidence 11123456889999999875 3457889999999999999999999986543221110 0 000 011111
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKL 519 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 519 (549)
.... .......+.++++.||..+|++|||++++++.
T Consensus 230 ~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 230 KLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 1111 11234578889999999999999999999984
No 194
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.3e-37 Score=309.12 Aligned_cols=247 Identities=21% Similarity=0.321 Sum_probs=188.6
Q ss_pred CCCCceEcccCceEEEEEEecC-Cc--EEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC------Ce
Q 008898 254 FSPKMLIGQGGNSKVYRTNHVD-GQ--VAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSK------EM 321 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~~-g~--~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~ 321 (549)
|.+.+.||+|+||.||+|...+ +. .+|+|.++.... ..+.+.+|+.+++.++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3466789999999999998744 33 689998875432 235678899999999999999999987432 25
Q ss_pred EEEEEecc-CCCHHHHHHH---------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeee
Q 008898 322 YAIVYNLL-NGSLKQYLKQ---------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDF 391 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~---------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DF 391 (549)
.+++|+|+ +|+|.+++.. +++.....++.||+.||.|||++ +|+||||||+|||++++ +.++|+||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~-~~~kl~Df 156 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNEN-MNVCVADF 156 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCC-CCEEECCC
Confidence 68888998 6899988731 56777889999999999999998 99999999999999988 68999999
Q ss_pred ccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhh
Q 008898 392 GAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLL 470 (549)
Q Consensus 392 Gla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~ 470 (549)
|++.......... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||....... . .....
T Consensus 157 g~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~---~~~~~ 228 (272)
T cd05075 157 GLSKKIYNGDYYR---QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE--I---YDYLR 228 (272)
T ss_pred CcccccCccccee---cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--H---HHHHH
Confidence 9987654322111 1122346778999999998899999999999999999999 788986543211 1 11111
Q ss_pred cccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 471 SSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 471 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..... . ........+.+++.+||..||.+|||+.+|++.|+.
T Consensus 229 ~~~~~------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 229 QGNRL------K----QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred cCCCC------C----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11110 0 112234557889999999999999999999998864
No 195
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-37 Score=315.42 Aligned_cols=250 Identities=24% Similarity=0.386 Sum_probs=194.8
Q ss_pred hcCCCCCceEcccCceEEEEEEe--------cCCcEEEEEEeecCC--cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcC
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH--------VDGQVAAVKVLKCTN--WSEEEVLREVELLSSI-KHENIVRIIGYCHSK 319 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~--------~~g~~~AvK~l~~~~--~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 319 (549)
.++|.+.+.||+|+||.||++.. .++..+|+|.++... ....++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 45688889999999999999964 124579999987542 2235688999999999 799999999999999
Q ss_pred CeEEEEEecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEE
Q 008898 320 EMYAIVYNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILL 379 (549)
Q Consensus 320 ~~~~lv~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl 379 (549)
...+++|||+ +|+|.+++.. +++.....++.||++||.|||++ +|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 9999999999 6799999853 45566788999999999999999 99999999999999
Q ss_pred ecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccc
Q 008898 380 SENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKAN 458 (549)
Q Consensus 380 ~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~ 458 (549)
+.+ +.++|+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 171 ~~~-~~~kl~D~g~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 171 TEN-NVMKIADFGLARDVNNIDY---YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred cCC-CcEEECCCccceecccccc---cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 988 6899999999865433211 111223346778999999998889999999999999999998 78888654321
Q ss_pred hhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 459 RESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 459 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. +...+..... . ..+......+.+++.+||..+|.+|||+.++++.|++
T Consensus 247 ~-----~~~~~~~~~~------~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 247 E-----LFKLLKEGHR------M----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred H-----HHHHHHcCCc------C----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 1 1111111110 0 1112334567888999999999999999999998854
No 196
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.3e-37 Score=360.29 Aligned_cols=260 Identities=27% Similarity=0.489 Sum_probs=216.5
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+...|...++||+|+||.||+|.. .+|..||||.++.... ....|++++++++||||++++++|.+++..++||||
T Consensus 688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 345688889999999999999987 5789999999875432 223568899999999999999999999999999999
Q ss_pred c-CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 329 L-NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 329 ~-~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
+ +|+|.++++.++|..+..++.||++||.|||..+.++|+||||||+||+++.+ +.+++. ||.+.....
T Consensus 765 ~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~-~~~~~~-~~~~~~~~~-------- 834 (968)
T PLN00113 765 IEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGK-DEPHLR-LSLPGLLCT-------- 834 (968)
T ss_pred CCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCC-CceEEE-ecccccccc--------
Confidence 9 78999999999999999999999999999997666699999999999999988 466765 665432211
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc-
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE- 486 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~- 486 (549)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||............|+...........++|+.+...
T Consensus 835 -~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (968)
T PLN00113 835 -DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV 913 (968)
T ss_pred -CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence 112368899999999999999999999999999999999999997655555667778877666666667777766432
Q ss_pred -CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 487 -YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 487 -~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
...++...+.+++.+||+.||++||||+++++.|+..
T Consensus 914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 3456677888999999999999999999999988754
No 197
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.6e-37 Score=302.22 Aligned_cols=246 Identities=26% Similarity=0.395 Sum_probs=196.9
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEc-CCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHS-KEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lv~e 327 (549)
+|+..+.||+|+||.||++.. .+++.+|+|.+...... .+.+.+|+++++.++|+|++++++.+.. +..++++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 478889999999999999976 45889999999754332 3457889999999999999999988764 456889999
Q ss_pred cc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 328 LL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 328 ~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
|+ +++|.+++.. +++.+...++.+++.||.|||++ +++|+||||+||+++.+ +.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~-~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRT-NIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecC-CcEEEecccceEEecccC
Confidence 99 6789998854 67788899999999999999999 99999999999999988 689999999986543211
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||........ ...... +.. +
T Consensus 157 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~-----~~~~~~-~~~-----~ 220 (257)
T cd08223 157 -----DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL-----VYRIIE-GKL-----P 220 (257)
T ss_pred -----CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-----HHHHHh-cCC-----C
Confidence 122345689999999999999999999999999999999999999975432211 111111 111 1
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..+......+.+++.+|+..||.+||++.++++ |+|+
T Consensus 221 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~-----~~~~ 257 (257)
T cd08223 221 ----PMPKDYSPELGELIATMLSKRPEKRPSVKSILR-----QPYI 257 (257)
T ss_pred ----CCccccCHHHHHHHHHHhccCcccCCCHHHHhc-----CCCC
Confidence 112334456888999999999999999999998 7775
No 198
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.5e-37 Score=311.07 Aligned_cols=248 Identities=24% Similarity=0.408 Sum_probs=194.5
Q ss_pred cCCCCCceEcccCceEEEEEEe------cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH------VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
.+|...+.||+|+||.||++.. .++..+|+|.++.... ....+.+|+++++.++|+||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4677888999999999999953 2356889998875432 23568899999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCc
Q 008898 325 VYNLL-NGSLKQYLKQ------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHH 385 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~ 385 (549)
+|||+ +|+|.+++.. +++..++.++.||+.||.|||+. +++||||||+|||++++ +.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~-~~ 160 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG-LV 160 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC-CC
Confidence 99999 6899999853 56677889999999999999999 99999999999999988 68
Q ss_pred eEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHH
Q 008898 386 PQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVL 464 (549)
Q Consensus 386 ~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~ 464 (549)
++|+|||++......... .......+++.|+|||.+.+..++.++|||||||++|||++ |.+||........ .
T Consensus 161 ~kL~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~-- 234 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYY---RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-I-- 234 (280)
T ss_pred EEECCCCceeEcCCCcee---ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-H--
Confidence 999999998654321110 11123345788999999999999999999999999999998 8999865443211 1
Q ss_pred HHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 465 WARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 465 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
....... .... +...+..+.+++..||..||.+||++.+|++.|+
T Consensus 235 --~~~~~~~------~~~~----~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 --ECITQGR------ELER----PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred --HHHHcCc------cCCC----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1111000 0111 1123355788999999999999999999999886
No 199
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2e-37 Score=314.56 Aligned_cols=246 Identities=26% Similarity=0.394 Sum_probs=191.0
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCc--EEEEEEeecCC--cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQ--VAAVKVLKCTN--WSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~--~~AvK~l~~~~--~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv 325 (549)
++|++.++||+|+||.||+|... ++. .+++|.++... ...+.+.+|+.+++++ +||||+++++++...+.++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 47889999999999999999764 343 47888887422 2235688899999999 799999999999999999999
Q ss_pred Eecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCc
Q 008898 326 YNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHH 385 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~ 385 (549)
+||+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+|||++++ +.
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~-~~ 157 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGEN-LA 157 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCC-Ce
Confidence 9998 6899999853 45677889999999999999998 99999999999999988 68
Q ss_pred eEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHH
Q 008898 386 PQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVL 464 (549)
Q Consensus 386 ~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~ 464 (549)
+||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||....... +
T Consensus 158 ~kl~dfg~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--~-- 227 (297)
T cd05089 158 SKIADFGLSRGEEVY------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--L-- 227 (297)
T ss_pred EEECCcCCCccccce------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--H--
Confidence 999999998532110 01111223557999999998889999999999999999997 999997654322 1
Q ss_pred HHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 465 WARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 465 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
...... + ..+.. +......+.+++..|+..+|.+|||+.++++.|+.
T Consensus 228 -~~~~~~-~-----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 274 (297)
T cd05089 228 -YEKLPQ-G-----YRMEK----PRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSR 274 (297)
T ss_pred -HHHHhc-C-----CCCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111110 0 11111 12233567889999999999999999999987743
No 200
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.9e-37 Score=306.00 Aligned_cols=248 Identities=22% Similarity=0.361 Sum_probs=198.6
Q ss_pred hcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
.++|...+.||+|+||.||++...++..+|+|.++......+.+.+|+.+++.++|+||+++++++.+ ..++++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 35788999999999999999987777889999987655555678899999999999999999999887 7788999999
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+|+|.+++.. +++..+..++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++.........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~- 158 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSAS-LVCKIADFGLARVIEDNEYT- 158 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCC-CcEEECCCcceeeccCCCcc-
Confidence 6799999864 56777888999999999999998 99999999999999998 68999999998654332111
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
......++..|+|||++..+.++.++|+|||||++|+|++ |..||....... +..+. ..+. . .
T Consensus 159 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~----~~~~----~-~-- 222 (260)
T cd05073 159 ---AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRAL----ERGY----R-M-- 222 (260)
T ss_pred ---cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH----hCCC----C-C--
Confidence 1112345678999999998889999999999999999999 899997653321 11111 1111 0 0
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
......+..+.+++.+|+..+|++||++.++++.|+.
T Consensus 223 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 --PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1112234568888999999999999999999999875
No 201
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-38 Score=323.16 Aligned_cols=253 Identities=24% Similarity=0.338 Sum_probs=203.0
Q ss_pred hcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS---EEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~ 326 (549)
...|++.+.||+||.++||++...+.+.||+|.+.....+ ..-+..|+..|.+|+ |.+||+||+|-..++.+|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 3569999999999999999999888888998887654433 356889999999996 999999999999999999999
Q ss_pred eccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
|+-+-+|.++|++ .....+..+..||+.|+.++|.. ||||.||||.|+|+-.. .+||+|||.|.....
T Consensus 440 E~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVkG--~LKLIDFGIA~aI~~--- 511 (677)
T KOG0596|consen 440 ECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVKG--RLKLIDFGIANAIQP--- 511 (677)
T ss_pred ecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEee--eEEeeeechhcccCc---
Confidence 9999999999976 22236677899999999999999 99999999999999875 799999999976554
Q ss_pred cccCccccccccCCccccccccccCC-----------CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGK-----------VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS 471 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~-----------~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~ 471 (549)
...+......+||+.||+||.+.... .+.++||||||||||+|+.|++||..... .|++
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~aK---- 581 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QIAK---- 581 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HHHH----
Confidence 33444555779999999999986332 56789999999999999999999975432 1222
Q ss_pred ccccccccCCcccccCCHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 472 SGLCERLIDPQLNEEYNREE-IEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 472 ~~~~~~~~d~~l~~~~~~~~-~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
+..+.||.-.-+|+.-- ...+.++++.||++||.+|||+.++|+ |+|+..
T Consensus 582 ---l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq-----hpFl~~ 632 (677)
T KOG0596|consen 582 ---LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ-----HPFLQI 632 (677)
T ss_pred ---HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc-----Cccccc
Confidence 23445553322222111 112888999999999999999999999 777654
No 202
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-36 Score=305.79 Aligned_cols=255 Identities=26% Similarity=0.348 Sum_probs=205.7
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
.|+..+.||.|+||.||+|.+ .++..+|+|+++.... ....+.+|+.+++.+.||||+++++++.+++.++++|||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 477778899999999999976 4688999999875432 2356788999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 -NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 -~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+|+|.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06640 85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCC-CCEEEcccccceeccCCc-----
Confidence 6799998864 56677788999999999999999 99999999999999988 689999999986543211
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.......++..|+|||++.+..++.++|+|||||++|||++|..||......... ... .......
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-----~~~----------~~~~~~~ 220 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-----FLI----------PKNNPPT 220 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-----hhh----------hcCCCCC
Confidence 1122346888999999999888999999999999999999999999755432110 000 1111122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHHH
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEEL 536 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~~ 536 (549)
.....+..+.+++..||..+|.+||++.++++ |+|+.........
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~-----~~~~~~~~~~~~~ 265 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLK-----HKFIVKNAKKTSY 265 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHh-----ChHhhhcchhhhH
Confidence 34456677889999999999999999999999 8998766654433
No 203
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.3e-37 Score=309.01 Aligned_cols=251 Identities=21% Similarity=0.334 Sum_probs=194.4
Q ss_pred CCCCCceEcccCceEEEEEEec-CC---cEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DG---QVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g---~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
+|...+.||+|+||.||+|... ++ ..+|+|.++.... ...++..|+.+++.++||||+++++++.+++.++++|
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 5778899999999999999763 33 3699999875422 2356889999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 327 NLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 327 e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
||+ +|+|.+++.. +++.+.+.++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSN-LVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCC-CcEEECCCccccccccCc
Confidence 999 6789999854 67788899999999999999999 99999999999999988 689999999986544322
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
.............+..|+|||.+.+..++.++|||||||++|||++ |..||....... ...+. ... ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~--~~~~i---~~~------~~ 229 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VINAI---EQD------YR 229 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH--HHHHH---HcC------Cc
Confidence 1111111111112457999999999999999999999999999886 999997554321 11111 110 00
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
-....+.+..+.+++..||..+|.+||++.+|++.|+.
T Consensus 230 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 230 ----LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred ----CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 01112334567889999999999999999999998764
No 204
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.7e-37 Score=310.94 Aligned_cols=257 Identities=22% Similarity=0.340 Sum_probs=196.5
Q ss_pred hcCCCCCceEcccCceEEEEEEecC-----------------CcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeee
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVD-----------------GQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVR 311 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----------------g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~ 311 (549)
..+|++.+.||+|+||.||++...+ +..+|+|.+..... ..+.+.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578999999999999999986532 24689999875532 2356888999999999999999
Q ss_pred EEEEEEcCCeEEEEEecc-CCCHHHHHHH--------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCC
Q 008898 312 IIGYCHSKEMYAIVYNLL-NGSLKQYLKQ--------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSN 376 (549)
Q Consensus 312 l~~~~~~~~~~~lv~e~~-~gsL~~~l~~--------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~N 376 (549)
+++++..++.+++++|++ +++|.+++.. +++...+.++.|++.||.|||+. +|+|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 999999999999999999 6789999853 46777889999999999999999 99999999999
Q ss_pred EEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCC
Q 008898 377 ILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT--GKEAIQT 454 (549)
Q Consensus 377 ILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt--G~~p~~~ 454 (549)
|+++.+ +.++|+|||++......... .......+++.|+|||.+.++.++.++|||||||++|||++ |..||..
T Consensus 161 ili~~~-~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 161 CLVGKN-YTIKIADFGMSRNLYSSDYY---RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred eeecCC-CceEEccccceeecccCcce---eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 999998 68999999998654332111 11223456789999999998889999999999999999998 6677754
Q ss_pred cccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 455 NKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 455 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..... ................. ...+...+..+.+++..|++.||.+|||+.+|++.|+.
T Consensus 237 ~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 237 LTDQQ--VIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred cChHH--HHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 43211 11111111111100000 01112233568899999999999999999999998763
No 205
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.2e-37 Score=310.69 Aligned_cols=251 Identities=27% Similarity=0.372 Sum_probs=200.2
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
.|+..+.||+|+||.||+|.+ .+++.+|+|.++.... ..+.+.+|+.+++.++||||+++++++..++.+++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 355667799999999999976 5688999999875432 2346789999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 -NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 -~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+++|.+++.. +++.....++.|+++||.|||+. +++|+||+|+||+++++ +.++|+|||++.......
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06642 85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCC-CCEEEccccccccccCcc-----
Confidence 6789988854 56778888999999999999998 99999999999999988 689999999986543211
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.......|+..|+|||++.+..++.++|+|||||++|||++|+.|+........ .. .. .. ...+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~---~~-~~-----~~~~~---- 220 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LF---LI-PK-----NSPPT---- 220 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--Hh---hh-hc-----CCCCC----
Confidence 122234688999999999988899999999999999999999999875433211 00 00 00 01111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
........+.+++..|+..+|.+||++.++++ |+|+.....
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~-----~~~~~~~~~ 261 (277)
T cd06642 221 LEGQYSKPFKEFVEACLNKDPRFRPTAKELLK-----HKFITRYTK 261 (277)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHH-----hHHHHHHhh
Confidence 12234456788999999999999999999999 789876553
No 206
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.4e-37 Score=302.06 Aligned_cols=240 Identities=26% Similarity=0.394 Sum_probs=191.0
Q ss_pred eEcccCceEEEEEEecCCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHHH
Q 008898 259 LIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLKQ 335 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~~ 335 (549)
+||+|+||.||+|...+++.+|+|.++..... ...+.+|+++++.++||||+++++++...+..+++|||+ +|+|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 68999999999998888899999998754322 245788999999999999999999999999999999999 789999
Q ss_pred HHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccc
Q 008898 336 YLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVN 411 (549)
Q Consensus 336 ~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~ 411 (549)
++.. +.+.....++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++......... ....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~----~~~~ 153 (250)
T cd05085 82 FLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGEN-NVLKISDFGMSRQEDDGIYS----SSGL 153 (250)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCC-CeEEECCCccceeccccccc----cCCC
Confidence 8854 56788889999999999999999 99999999999999988 68999999998643321111 1112
Q ss_pred cccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHH
Q 008898 412 VVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNRE 490 (549)
Q Consensus 412 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 490 (549)
..+++.|+|||++.++.++.++|||||||++|+|++ |..||......... .... .+. .. ..+..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~-----~~~~-~~~-----~~----~~~~~ 218 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR-----EQVE-KGY-----RM----SCPQK 218 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH-----HHHH-cCC-----CC----CCCCC
Confidence 234667999999998899999999999999999998 99999765332211 1111 111 00 11122
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 491 EIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 491 ~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
.+..+.+++.+|+..+|++||++.++++.|.
T Consensus 219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 3456888999999999999999999999774
No 207
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.2e-37 Score=310.73 Aligned_cols=253 Identities=25% Similarity=0.393 Sum_probs=204.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
.+|+..+.||.|+||.||++.. .+|+.+|+|.+..... ..+.+.+|+.+++.++||||+++++++...+.+++++||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688899999999999999976 6789999999875443 3456788999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 -NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 -~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+|+|.+++.. +++.++..++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~-~~~kl~dfg~~~~~~~~~----- 169 (296)
T cd06655 99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMD-GSVKLTDFGFCAQITPEQ----- 169 (296)
T ss_pred CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC-CCEEEccCccchhccccc-----
Confidence 6789998865 67888999999999999999999 99999999999999988 689999999986533211
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... .. ... ....+ .
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~-~~----~~~-~~~~~-------~ 236 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LI----ATN-GTPEL-------Q 236 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HH----Hhc-CCccc-------C
Confidence 11223468899999999998889999999999999999999999997665422211 10 000 00000 0
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
.+......+.+++.+||..||.+||++.++++ |+|++...
T Consensus 237 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~-----~~~~~~~~ 276 (296)
T cd06655 237 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ-----HPFLKLAK 276 (296)
T ss_pred CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh-----ChHhhhcc
Confidence 11223345778889999999999999999998 89998655
No 208
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.6e-37 Score=306.51 Aligned_cols=251 Identities=23% Similarity=0.377 Sum_probs=196.0
Q ss_pred hcCCCCCceEcccCceEEEEEEec-CCc---EEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV-DGQ---VAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~---~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
.++|...+.||+|+||.||+|... +++ .+|+|.++.... ....+..|+++++.++||||+++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 346888899999999999999763 333 799999875432 23568889999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
+|||+ +|+|.+++.. +++.....++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSN-LECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCC-CcEEECCCccceeccc
Confidence 99999 6789999854 57788899999999999999999 99999999999999988 6899999999865432
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.... .........++.|+|||++.+..++.++|||||||++|||++ |+.||....... +...+....
T Consensus 160 ~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-----~~~~i~~~~----- 227 (268)
T cd05063 160 DPEG--TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-----VMKAINDGF----- 227 (268)
T ss_pred cccc--ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-----HHHHHhcCC-----
Confidence 2111 111111223467999999998889999999999999999997 999996544321 111111110
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. .....+.+..+.+++..|+..+|.+||++.+|++.|++
T Consensus 228 ~-----~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 228 R-----LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred C-----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 0 01112334567899999999999999999999998865
No 209
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.5e-37 Score=311.05 Aligned_cols=250 Identities=24% Similarity=0.413 Sum_probs=196.1
Q ss_pred hcCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 322 (549)
.++|+..+.||+|+||.||++... ++..+|+|++...... ..++.+|+.+++.++||||+++++++..++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457899999999999999999753 4678999998754322 35688899999999999999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH-------------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCC
Q 008898 323 AIVYNLL-NGSLKQYLKQ-------------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSN 376 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~-------------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~N 376 (549)
+++|||+ +|+|.+++.. +++...+.++.|++.||.|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 9999999 6799999853 45566789999999999999999 99999999999
Q ss_pred EEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCc
Q 008898 377 ILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTN 455 (549)
Q Consensus 377 ILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 455 (549)
||++.+ +.++|+|||++......... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 161 il~~~~-~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 161 CLVGEN-MVVKIADFGLSRNIYSADYY---KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred eEecCC-CceEECccccceecccCccc---cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999998 68999999998643322111 01112234667999999998899999999999999999997 88888654
Q ss_pred ccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 456 KANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 456 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.... . ...... +... ..+...+..+.+++.+|++.+|.+|||+.|+++.|++
T Consensus 237 ~~~~--~---~~~~~~-~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 AHEE--V---IYYVRD-GNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CHHH--H---HHHHhc-CCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 3221 1 111111 1100 0112234568889999999999999999999998864
No 210
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.3e-37 Score=304.16 Aligned_cols=242 Identities=24% Similarity=0.390 Sum_probs=193.1
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEE-EcCCeEEEEEecc-
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYC-HSKEMYAIVYNLL- 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~-~~~~~~~lv~e~~- 329 (549)
.+|...+.||+|+||.||++.. .|..+|+|.++... ..+.+.+|+.+++.++|+|++++++++ .+++..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 4688889999999999999976 47789999987543 345788999999999999999999975 4566789999999
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+|+|.+++.. +++.....++.|++.||.|||+. +++||||||+||+++++ +.+||+|||++......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~---- 155 (256)
T cd05082 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSED-NVAKVSDFGLTKEASST---- 155 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCC-CcEEecCCccceecccc----
Confidence 6799999864 56678889999999999999999 99999999999999998 68999999998543221
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||....... + ...+.. +. .+
T Consensus 156 ----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~--~---~~~~~~-~~-----~~-- 218 (256)
T cd05082 156 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--V---VPRVEK-GY-----KM-- 218 (256)
T ss_pred ----CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--H---HHHHhc-CC-----CC--
Confidence 112345668999999998889999999999999999997 999986543211 1 111111 11 11
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
......+..+.+++.+|+..+|.+|||+.++++.|+.
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 --DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 1122334567888999999999999999999998865
No 211
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=318.12 Aligned_cols=257 Identities=22% Similarity=0.335 Sum_probs=207.6
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
+...+.+.||+|-||.|.++....+.+||||.++..... ..+|.+|+++|.+|+||||+.|+|+|..++.+++++||+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 345677889999999999999877899999999876533 367999999999999999999999999999999999999
Q ss_pred -CCCHHHHHHHh-----chhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 330 -NGSLKQYLKQL-----KWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 330 -~gsL~~~l~~~-----~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+|+|.+|+... .......|+.||+.||+||.+. +++||||.+.|||++.++ ++||+|||+++......+.
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~-~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEF-TIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcc-cEEecCcccccccccCCce
Confidence 89999999764 2334567999999999999999 999999999999999995 8999999999866654443
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHH--cCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELI--TGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ell--tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.... ..+-..+|||||.+..++++.++|+|+|||.+||++ +...||.....+ ..+..+..+....-....
T Consensus 694 ~vqg---r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~~~~~--- 765 (807)
T KOG1094|consen 694 RVQG---RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQGRQVV--- 765 (807)
T ss_pred eeec---ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCCccee---
Confidence 3322 234467899999999999999999999999999975 578888766543 333333333322221111
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
...+..++..+.+++..||++|-.+||+++++...|+++
T Consensus 766 ---l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 ---LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ---ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 223455677888999999999999999999999888654
No 212
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=329.45 Aligned_cols=250 Identities=26% Similarity=0.364 Sum_probs=199.8
Q ss_pred cCCCCCceEcccCceEEEEEEecC-CcEEEEEEeec-CCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVD-GQVAAVKVLKC-TNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~-g~~~AvK~l~~-~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
+.|.++.-||.|+||+||++..++ +-..|.|++.. +....++++-|++||..+.||+|++|++.|.-++.++|+.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 346677779999999999997644 56677888853 3344578999999999999999999999887788899999999
Q ss_pred C-CCHHHHH----HHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 N-GSLKQYL----KQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~-gsL~~~l----~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+ |-.+..+ ..++..++..+++|++.||.|||++ +|||||||..|||++-+ |.++|+|||.+.. ...
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~Tld-GdirLADFGVSAK-----n~~ 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLD-GDIRLADFGVSAK-----NKS 182 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEec-CcEeeeccccccc-----chh
Confidence 5 5566665 3478889999999999999999999 99999999999999999 7999999998732 233
Q ss_pred cCccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
.......+.|||+|||||+++ ..+|+.++||||||+.|.||..+.+|.....+....+- +.......++
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllK------iaKSePPTLl 256 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK------IAKSEPPTLL 256 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHH------HhhcCCCccc
Confidence 344556789999999999986 45799999999999999999999999876654332221 1111111111
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
.+..+...+.+++..||..||..||++.++++ |+|+.
T Consensus 257 -------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~-----Hpfv~ 293 (1187)
T KOG0579|consen 257 -------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK-----HPFVQ 293 (1187)
T ss_pred -------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh-----Ccccc
Confidence 23455667788889999999999999999999 89975
No 213
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=5.3e-37 Score=308.23 Aligned_cols=258 Identities=27% Similarity=0.383 Sum_probs=203.1
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
.++|.+.+.||.|+||.||++.. .++..+|+|+++..... .+.+..|+++++.++||||+++++++..+..++++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 35688889999999999999987 46899999999755432 34688899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 329 L-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 329 ~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+ +|+|.+++.. +++.....++.|++.||.|||+. +|+|+||||+||+++.+ +.++|+|||++......
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~-~~~~l~d~g~~~~~~~~--- 156 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLD-GDVKLADFGVSAKNKST--- 156 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCC-CCEEEccCccchhhccc---
Confidence 9 6689988854 67788899999999999999999 99999999999999998 68999999987543221
Q ss_pred ccCccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
........||+.|+|||.+. ...++.++|+|||||++|+|++|+.||........ .. ..... ..
T Consensus 157 --~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-~~----~~~~~-~~--- 225 (280)
T cd06611 157 --LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-LL----KILKS-EP--- 225 (280)
T ss_pred --ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-HH----HHhcC-CC---
Confidence 11223456899999999875 34467899999999999999999999976543221 11 11111 00
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHH
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
+.+ ..+......+.+++..||..+|.+||++.++++ |+|++...+...
T Consensus 226 --~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~-----~~~~~~~~~~~~ 273 (280)
T cd06611 226 --PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK-----HPFVSDQSDNKA 273 (280)
T ss_pred --CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc-----ChhhcccchhHH
Confidence 111 011223345778889999999999999999999 899987754433
No 214
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.7e-37 Score=308.39 Aligned_cols=254 Identities=29% Similarity=0.379 Sum_probs=205.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+..+.||.|+||.||++.. .+++.+|+|++..... ....+.+|+.+++.++|+||+++++++.++..+++++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 3678888999999999999976 4689999999875532 234678899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 329 L-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 329 ~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
+ +++|.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++++ +.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~---- 152 (274)
T cd06609 81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEE-GDVKLADFGVSGQLTSTM---- 152 (274)
T ss_pred eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCC-CCEEEcccccceeecccc----
Confidence 9 6789999865 68888899999999999999998 99999999999999998 689999999986654321
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||......... ... ... ..+.+..
T Consensus 153 -~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~-----~~~-~~~-----~~~~~~~ 220 (274)
T cd06609 153 -SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL-----FLI-PKN-----NPPSLEG 220 (274)
T ss_pred -cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH-----HHh-hhc-----CCCCCcc
Confidence 1223456889999999999888999999999999999999999999765422110 000 011 1111111
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
. .....+.+++..||..+|.+|||++++++ |+|+......
T Consensus 221 ~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~-----~~~~~~~~~~ 260 (274)
T cd06609 221 N---KFSKPFKDFVSLCLNKDPKERPSAKELLK-----HKFIKKAKKT 260 (274)
T ss_pred c---ccCHHHHHHHHHHhhCChhhCcCHHHHhh-----ChhhcCCCcc
Confidence 1 13445778889999999999999999999 8999776654
No 215
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=327.53 Aligned_cols=238 Identities=32% Similarity=0.438 Sum_probs=199.5
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
|...+-||.|+||.||-+.. .+...||||.+..+.. .-.++..|+.+|++++|||++.+-|+|-.+.+.|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 55566799999999999976 6788999999975532 225799999999999999999999999999999999999
Q ss_pred cCCCHHHHH----HHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYL----KQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l----~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
|-|+-.+.+ +.+.+.++..|..+.+.||.|||+. +.||||||..|||+++. |.+||+|||.|....
T Consensus 108 ClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~-g~VKLaDFGSAsi~~------ 177 (948)
T KOG0577|consen 108 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEP-GLVKLADFGSASIMA------ 177 (948)
T ss_pred HhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCC-CeeeeccccchhhcC------
Confidence 988866666 3477788899999999999999999 99999999999999999 799999999985433
Q ss_pred cCccccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 405 ENVKPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
...+++|||.|||||++. .|.|+-++||||||++..||.-.++|+...+.. ..++..+ +.-.|
T Consensus 178 ---PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-SALYHIA----------QNesP 243 (948)
T KOG0577|consen 178 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIA----------QNESP 243 (948)
T ss_pred ---chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-HHHHHHH----------hcCCC
Confidence 345789999999999985 678999999999999999999999998655432 2232222 12223
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.+. .+++.+.++.++..||+.-|.+|||..++++
T Consensus 244 tLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 244 TLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 332 5678889999999999999999999999998
No 216
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.4e-37 Score=303.16 Aligned_cols=247 Identities=22% Similarity=0.435 Sum_probs=198.0
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
.+|+..+.||+|+||.||++...++..+|+|.++.......++.+|++++++++|||++++++++.....++++|||+ +
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 367788899999999999998877889999999866666678999999999999999999999999999999999999 6
Q ss_pred CCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 331 GSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 331 gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
|+|.+++.. +.+.....++.+++.||.|||+. +++|+||||+||+++.+ +.++|+|||++........
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~---- 155 (256)
T cd05112 84 GCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGEN-QVVKVSDFGMTRFVLDDQY---- 155 (256)
T ss_pred CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCC-CeEEECCCcceeecccCcc----
Confidence 789998853 56777888999999999999999 99999999999999988 6899999999864322111
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
.......++..|+|||.+.++.++.++|||||||++|||++ |..||....... ....+... .....+.
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~---~~~~~~~--- 224 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-----VVETINAG---FRLYKPR--- 224 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-----HHHHHhCC---CCCCCCC---
Confidence 01112235678999999998899999999999999999998 999987544211 11111111 0111111
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
.....+.+++.+||..+|.+|||+.++++.|.
T Consensus 225 ----~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 ----LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ----CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12356888999999999999999999999763
No 217
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.6e-37 Score=305.73 Aligned_cols=247 Identities=26% Similarity=0.398 Sum_probs=194.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
++|...+.||+|+||.||++.. .+++.+|+|+++..... ...+.+|+.+++.++||||+++++++..++.+++++||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4678888899999999999976 56899999999765432 345778999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 -NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 -~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
+|+|.+++.. +++.+...++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++......
T Consensus 89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~-~~~~l~dfg~~~~~~~~----- 159 (267)
T cd06645 89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDN-GHVKLADFGVSAQITAT----- 159 (267)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC-CCEEECcceeeeEccCc-----
Confidence 5789998854 67788899999999999999999 99999999999999988 68999999998654321
Q ss_pred CccccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 406 NVKPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
........|++.|+|||++. .+.++.++|+|||||++|+|++|..||....+....... ... ....+.
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~-----~~~----~~~~~~ 230 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM-----TKS----NFQPPK 230 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh-----hcc----CCCCCc
Confidence 11123457899999999874 456889999999999999999999998655432211100 000 000111
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
... .......+.+++..|+..+|++||++.+|++
T Consensus 231 ~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 231 LKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 110 0112345778899999999999999999998
No 218
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.9e-37 Score=309.64 Aligned_cols=259 Identities=22% Similarity=0.344 Sum_probs=197.2
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|+..+.||.|+||.||+|.. .+|+.+|||.++..... ...+.+|++++++++||||+++++++.+++.++++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 478889999999999999977 56899999998754322 24688999999999999999999999999999999999
Q ss_pred cCCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 329 LNGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 329 ~~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+.++|.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~-~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC-CCEEEeeccchhhcccCc--
Confidence 98899988843 56778889999999999999999 99999999999999998 689999999986443211
Q ss_pred ccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc---------
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG--------- 473 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~--------- 473 (549)
.......+++.|+|||.+.+.. ++.++|||||||++|||+||+.||........ +...........
T Consensus 155 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 155 ---RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred ---cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhhhhH
Confidence 1122335788999999887654 58899999999999999999999976543222 111111100000
Q ss_pred ------ccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 474 ------LCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 474 ------~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.........+ ..........+.+++.+|++.||.+|||+.++++ |+||
T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~-----~~~f 284 (284)
T cd07860 231 LPDYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA-----HPFF 284 (284)
T ss_pred HHHHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc-----CCCC
Confidence 0000000000 0001112345678899999999999999999998 7886
No 219
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-37 Score=347.08 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=196.8
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEc--CCeEE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHS--KEMYA 323 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~ 323 (549)
..++|.+.+.||+|+||.||++.+ .++..+|+|++...... ...+..|+.+++.|+||||++++++|.. ...++
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 456899999999999999999987 45789999998754332 3468899999999999999999998843 46799
Q ss_pred EEEecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCC----CCEEEecCCCCCEEEecC---------
Q 008898 324 IVYNLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCD----PPIIHRDVKSSNILLSEN--------- 382 (549)
Q Consensus 324 lv~e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~----~~iiHrDlkp~NILl~~~--------- 382 (549)
|||||+ +|+|.++|.. +++..++.|+.||+.||.|||+... ++||||||||+||||+.+
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 999999 6799998853 6778889999999999999998521 369999999999999653
Q ss_pred -------CCceEEeeeccccccccccccccCccccccccCCcccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCC
Q 008898 383 -------FHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY--GKVDEKIDVYSYGVVLLELITGKEAIQ 453 (549)
Q Consensus 383 -------~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~ 453 (549)
.+.+||+|||++...... .......||+.|+|||++.+ ..++.++||||||||||||++|..||.
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIE------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred cccccCCCCceEEccCCcccccccc------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 124899999998654321 12234579999999999864 458899999999999999999999997
Q ss_pred CcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 454 TNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 454 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
....... +...+.. + +.+.. ......+.+++..||..+|.+||++.++++ ++|++..
T Consensus 245 ~~~~~~q----li~~lk~-~-------p~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~-----h~~ik~i 301 (1021)
T PTZ00266 245 KANNFSQ----LISELKR-G-------PDLPI---KGKSKELNILIKNLLNLSAKERPSALQCLG-----YQIIKNV 301 (1021)
T ss_pred cCCcHHH----HHHHHhc-C-------CCCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhc-----cHHHhhc
Confidence 5433221 1111111 0 11110 112345778899999999999999999997 6787644
No 220
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=6.6e-37 Score=303.64 Aligned_cols=244 Identities=29% Similarity=0.441 Sum_probs=190.7
Q ss_pred ceEcccCceEEEEEEe-cC---CcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VD---GQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~---g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+.||+|+||.||+|.. .. +..+|+|.+..... ..+++.+|+.+++.+.||||+++++++.. +.++++|+|+ +
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 3699999999999965 22 36899999976554 34568899999999999999999998864 5678999998 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|.+++.. +++..+..++.|++.||.|||.. +++|+||||+|||++.+ +.++|+|||++.......... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~-~~~kl~df~~~~~~~~~~~~~--~ 153 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNR-HQAKISDFGMSRALGAGSDYY--R 153 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCC-CcEEeccccccceeecCCccc--c
Confidence 799999965 67888899999999999999999 99999999999999998 689999999987654322111 1
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
......++..|+|||.+.+..++.++|||||||++|+|++ |..||...... .+..+.. ... .. .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~~----~~~--~~-------~ 218 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAMLE----SGE--RL-------P 218 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHH----cCC--cC-------C
Confidence 1112234568999999998899999999999999999998 99999765432 1211111 110 00 1
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
.+...+..+.+++.+|+..+|.+||++.++++.|++.
T Consensus 219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 219 RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 1122345678899999999999999999999998765
No 221
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.2e-37 Score=319.56 Aligned_cols=267 Identities=21% Similarity=0.272 Sum_probs=202.8
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC------
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSK------ 319 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 319 (549)
+.++|+..+.||+|+||.||++.. .+|+.+|+|.+..... ....+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999976 5789999999864322 234577899999999999999999988543
Q ss_pred CeEEEEEeccCCCHHHHHHH-hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 320 EMYAIVYNLLNGSLKQYLKQ-LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 320 ~~~~lv~e~~~gsL~~~l~~-~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
...+++|||+.++|.+.+.. ++......++.|++.||.|||+. +|+||||||+||+++.+ +.++|+|||++....
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSD-CTLKILDFGLARTAG 169 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCC-CCEEEccCccceeCC
Confidence 35799999999999988753 77778888999999999999999 99999999999999998 689999999986543
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHH----------
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARS---------- 468 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~---------- 468 (549)
.. .......||+.|+|||.+.+..++.++|||||||++|+|++|+.||........ .......
T Consensus 170 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 170 TS------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ-WNKIIEQLGTPSDEFMS 242 (353)
T ss_pred CC------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHH
Confidence 21 112345688999999999999999999999999999999999999976542111 0000000
Q ss_pred --------hhccc------ccccccCC----cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 469 --------LLSSG------LCERLIDP----QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 469 --------~~~~~------~~~~~~d~----~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
..... ....+... .............+.+++.+||..||.+|||+.++++ |+|++.-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~-----~~~~~~~ 317 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ-----HPYINVW 317 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc-----ChhHhhc
Confidence 00000 00011000 0001111233556789999999999999999999998 8988743
Q ss_pred hH
Q 008898 531 RE 532 (549)
Q Consensus 531 ~~ 532 (549)
..
T Consensus 318 ~~ 319 (353)
T cd07850 318 YD 319 (353)
T ss_pred cC
Confidence 33
No 222
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.1e-36 Score=303.88 Aligned_cols=251 Identities=26% Similarity=0.366 Sum_probs=194.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC------HHHHHHHHHHHhcCCCCCeeeEEEEEEc--CCeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS------EEEVLREVELLSSIKHENIVRIIGYCHS--KEMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~ 322 (549)
.+|...+.||+|+||.||++.. .++..+|+|.+...... ...+.+|+.+++.++||||+++++++.+ ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688999999999999999977 56899999998654211 2347789999999999999999998865 4678
Q ss_pred EEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
++++||+ +++|.+++.. +++.....++.|++.||.|||+. +|+|+||||+||+++.+ +.++|+|||++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~-~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSA-GNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCC-CCEEEccCCCccccc
Confidence 8999999 5789999854 56777888999999999999998 99999999999999988 689999999986543
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
..... ........|+..|+|||.+.+..++.++|||||||++|||++|+.||......... .. ... ..
T Consensus 158 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~----~~-~~~-----~~ 225 (266)
T cd06651 158 TICMS--GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI----FK-IAT-----QP 225 (266)
T ss_pred ccccc--CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH----HH-Hhc-----CC
Confidence 21111 11112346889999999999888999999999999999999999999765322111 10 100 01
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
..+.+ +......+.+++ .||..+|.+||++++|++ |+||.
T Consensus 226 ~~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~-----hp~~~ 265 (266)
T cd06651 226 TNPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLR-----HPFAQ 265 (266)
T ss_pred CCCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhc-----Ccccc
Confidence 11222 222334455566 588899999999999998 88875
No 223
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.9e-37 Score=309.19 Aligned_cols=252 Identities=21% Similarity=0.296 Sum_probs=196.9
Q ss_pred hcCCCCCceEcccCceEEEEEEecC-----CcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEc-CCeE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVD-----GQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHS-KEMY 322 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~ 322 (549)
.++|...++||+|+||.||+|.+.+ +..+++|.++.... ....+.+|+.+++.++||||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678889999999999999998754 68899998874422 23557889999999999999999998765 5678
Q ss_pred EEEEecc-CCCHHHHHHH-----------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEee
Q 008898 323 AIVYNLL-NGSLKQYLKQ-----------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSD 390 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~-----------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~D 390 (549)
+++++|+ +|+|.+++.. +++...+.++.|++.||.|||+. +++|+||||+||+++++ +.+||+|
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~-~~~kl~d 160 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEE-LQVKITD 160 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCC-CcEEECC
Confidence 8899998 6899999854 56778889999999999999999 99999999999999988 6899999
Q ss_pred eccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHh
Q 008898 391 FGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSL 469 (549)
Q Consensus 391 FGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~ 469 (549)
||+++......... ......++..|+|||.+.+..++.++|||||||++||+++ |+.||....... +.. ..
T Consensus 161 ~g~~~~~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~---~~ 232 (280)
T cd05043 161 NALSRDLFPMDYHC---LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE--MAA---YL 232 (280)
T ss_pred CCCcccccCCceEE---eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH--HHH---HH
Confidence 99986543221111 1112345778999999998889999999999999999999 999997653211 111 11
Q ss_pred hcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 470 LSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 470 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
..... . ......+..+.+++..||..||++|||+.++++.|+..+
T Consensus 233 ~~~~~------~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 233 KDGYR------L----AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred HcCCC------C----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 11110 0 011123456788999999999999999999999887543
No 224
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-37 Score=336.56 Aligned_cols=275 Identities=20% Similarity=0.212 Sum_probs=194.1
Q ss_pred hcCCCCCceEcccCceEEEEEEec--CCcEEEEE------------------EeecCCcCHHHHHHHHHHHhcCCCCCee
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHV--DGQVAAVK------------------VLKCTNWSEEEVLREVELLSSIKHENIV 310 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~--~g~~~AvK------------------~l~~~~~~~~~~~~E~~il~~l~h~nIv 310 (549)
.++|.+.+.||+|+||+||++... ++...+.| .++........+.+|+.+|+.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999998642 22222222 1111111234577899999999999999
Q ss_pred eEEEEEEcCCeEEEEEeccCCCHHHHHHH--------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC
Q 008898 311 RIIGYCHSKEMYAIVYNLLNGSLKQYLKQ--------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN 382 (549)
Q Consensus 311 ~l~~~~~~~~~~~lv~e~~~gsL~~~l~~--------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~ 382 (549)
++++++...+..+++++++.++|.+++.. ........++.||+.||.|||++ +||||||||+|||++.+
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCD 303 (501)
T ss_pred cEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC
Confidence 99999999999999999999999888743 12345667999999999999999 99999999999999998
Q ss_pred CCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCC-CCccc-chh
Q 008898 383 FHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAI-QTNKA-NRE 460 (549)
Q Consensus 383 ~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~-~~~~~-~~~ 460 (549)
+.+||+|||++....... ........||+.|+|||++.+..++.++|||||||++|||++|..++ ..... ...
T Consensus 304 -~~vkL~DFGla~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 304 -GKIVLGDFGTAMPFEKER----EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred -CCEEEEeCCCceecCccc----ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 689999999996543321 11222467999999999999999999999999999999999987544 32221 111
Q ss_pred hHHHHHHHhhc-ccc-------cccccCCc----ccccCCH-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 461 SLVLWARSLLS-SGL-------CERLIDPQ----LNEEYNR-----EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 461 ~l~~~~~~~~~-~~~-------~~~~~d~~----l~~~~~~-----~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
.+......+.. ... ....++.. ....... .....+.+++.+||..||.+|||+.|+++
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~----- 453 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA----- 453 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh-----
Confidence 22111111100 000 00000000 0000000 11234566789999999999999999998
Q ss_pred chhhhhhhHHHHHHh
Q 008898 524 DYWLKMKREKEELLN 538 (549)
Q Consensus 524 ~~w~~~~~~~~~~~~ 538 (549)
|+||....++.....
T Consensus 454 hp~f~~~~~~~~~~~ 468 (501)
T PHA03210 454 LPLFSAEEEEEILFI 468 (501)
T ss_pred ChhhhcCCchHHHHH
Confidence 899987665554443
No 225
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.3e-36 Score=307.69 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=198.6
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
+.|++.+.||.|+||.||+|.. .+++.+++|.+..... ....+.+|+.+++.++||||+++++++..++.++++|||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 5688999999999999999987 4589999999875542 2356788999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 -NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 -~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+++|..++.+ +++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.++|+|||++......
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~~~---- 163 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLD-GDIKLADFGVSAKNVKT---- 163 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCC-CCEEEccCccceecccc----
Confidence 5678777643 67888899999999999999998 99999999999999988 68999999987542221
Q ss_pred cCccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
........|++.|+|||++. ...++.++|||||||++|||++|..||........ ... .....
T Consensus 164 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~~~----~~~~~------ 231 (292)
T cd06644 164 -LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLK----IAKSE------ 231 (292)
T ss_pred -ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH-HHH----HhcCC------
Confidence 11223456889999999985 34468899999999999999999999976543211 111 11110
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
.+.. ..+......+.+++..||..+|++||++.++++ |+|+.....
T Consensus 232 ~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~-----~~~~~~~~~ 277 (292)
T cd06644 232 PPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE-----HPFVSSVTS 277 (292)
T ss_pred CccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc-----Ccccccccc
Confidence 0110 011222345778889999999999999999998 899876443
No 226
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.4e-37 Score=305.50 Aligned_cols=251 Identities=29% Similarity=0.424 Sum_probs=198.6
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCC------e
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCHSKE------M 321 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~------~ 321 (549)
.+++|+..+.||+|+||.||+|.. .+++.+++|++.......+.+.+|+.+++++ +|+||+++++++.... .
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 467899999999999999999987 4688999999987766667789999999999 7999999999996544 5
Q ss_pred EEEEEecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecc
Q 008898 322 YAIVYNLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGA 393 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGl 393 (549)
++++|||+ +++|.+++.. +++.....++.|+++||.|||+. +++|+||+|+||+++.+ +.++|+|||+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~-~~~~l~d~~~ 159 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKN-AEVKLVDFGV 159 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccC-CeEEECCCcc
Confidence 89999999 5688888743 56777888999999999999999 99999999999999998 6899999999
Q ss_pred ccccccccccccCccccccccCCcccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHH
Q 008898 394 AMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY-----GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARS 468 (549)
Q Consensus 394 a~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~ 468 (549)
+....... .......|++.|+|||++.. ..++.++|||||||++|+|++|..||........ +..
T Consensus 160 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~---- 229 (275)
T cd06608 160 SAQLDSTL-----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA-LFK---- 229 (275)
T ss_pred ceecccch-----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH-HHH----
Confidence 86543211 12234568999999998754 3467899999999999999999999975432221 111
Q ss_pred hhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 469 LLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 469 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.. .+. .+.. .........+.+++.+||..||.+|||+.++++ |+|+
T Consensus 230 ~~-~~~-----~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~-----~~~~ 275 (275)
T cd06608 230 IP-RNP-----PPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE-----HPFI 275 (275)
T ss_pred hh-ccC-----CCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc-----CCCC
Confidence 10 000 1111 112234567888999999999999999999998 7884
No 227
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.5e-37 Score=311.13 Aligned_cols=256 Identities=20% Similarity=0.343 Sum_probs=194.4
Q ss_pred cCCCCCceEcccCceEEEEEEec-----------------CCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-----------------DGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRI 312 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-----------------~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l 312 (549)
++|++.+.||+|+||.||++... ++..+|+|+++.... ...++.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56899999999999999998532 234789999875432 23568899999999999999999
Q ss_pred EEEEEcCCeEEEEEecc-CCCHHHHHHH--------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCE
Q 008898 313 IGYCHSKEMYAIVYNLL-NGSLKQYLKQ--------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNI 377 (549)
Q Consensus 313 ~~~~~~~~~~~lv~e~~-~gsL~~~l~~--------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NI 377 (549)
++++..++..+++|||+ +|+|.+++.. +++.....++.|++.||.|||+. +++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 99999999999999999 6799999854 33457889999999999999999 999999999999
Q ss_pred EEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCc
Q 008898 378 LLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT--GKEAIQTN 455 (549)
Q Consensus 378 Ll~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt--G~~p~~~~ 455 (549)
|++.+ +.++|+|||++......... .......+++.|+|||...++.++.++|||||||++|||++ |..||...
T Consensus 162 li~~~-~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 162 LVGKN-YTIKIADFGMSRNLYSGDYY---RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEcCC-CCEEeccCcccccccCCcce---eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 99988 68999999998654322111 11112344678999999888899999999999999999998 67888654
Q ss_pred ccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 456 KANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 456 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
...+ .............. ....+ .+..++..+.+++.+||+.||.+||++.+|++.|++
T Consensus 238 ~~~~--~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQ--VIENTGEFFRDQGR-QVYLP-----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHH--HHHHHHHHHhhccc-cccCC-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 3321 11111111111000 00001 112234678889999999999999999999998863
No 228
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=9.4e-37 Score=312.18 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=204.8
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
+|...+.||+|+||.||++... +++.+|+|.+...... ...+..|+++++.++||||+++++.+..++..+++||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 6888899999999999999874 5899999999765432 2457889999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 328 LL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 328 ~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
|+ +++|.+++.. +++.....++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++.......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHES-GHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCC-CCEEEeecchhhcccccc
Confidence 98 6799999854 56777888999999999999999 99999999999999998 689999999986443211
Q ss_pred ccc------------------------cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCccc
Q 008898 402 QVS------------------------ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKA 457 (549)
Q Consensus 402 ~~~------------------------~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~ 457 (549)
... .........||..|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 100 01112245789999999999988899999999999999999999999976543
Q ss_pred chhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC----HHHHHHHhcCCchhhhhhhHH
Q 008898 458 NRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT----MKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 458 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs----~~evl~~L~~~~~w~~~~~~~ 533 (549)
... + .... +..............+.+++..|+..||.+||| +.++++ |+||++....
T Consensus 238 ~~~-~---~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~-----~~~~~~~~~~ 298 (316)
T cd05574 238 DET-F---SNIL----------KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ-----HPFFRGVNWA 298 (316)
T ss_pred HHH-H---HHHh----------cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc-----CchhhcCChh
Confidence 221 1 1111 111100111114567888999999999999999 888887 8999876544
Q ss_pred HH
Q 008898 534 EE 535 (549)
Q Consensus 534 ~~ 535 (549)
.-
T Consensus 299 ~~ 300 (316)
T cd05574 299 LI 300 (316)
T ss_pred hc
Confidence 33
No 229
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=8.9e-37 Score=304.01 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=200.9
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-------CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-------SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
+|+..+.||+|+||.||++.. .+++.+|+|+++.... ..+.+.+|+.+++.++|+||+++++++.+.+.+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999976 6789999999975431 12467889999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
++||+ +++|.+++.+ +++.....++.|++.||.|||++ +++|+||+|+||+++.+...++|+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 99999 5789999865 56778888999999999999999 99999999999999877346899999998655432
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
... .........|+..|+|||.+.+..++.++|+|||||++|+|++|..||........ ...+. ....
T Consensus 158 ~~~-~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~-~~~~--------- 225 (268)
T cd06630 158 GTG-AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIF-KIAS--------- 225 (268)
T ss_pred ccc-CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHH-HHhc---------
Confidence 111 11112245689999999999888899999999999999999999999965433211 11111 0000
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
.......+......+.+++..|+..+|.+||++.++++ |+||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~-----~~~~~ 268 (268)
T cd06630 226 ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK-----HPVFR 268 (268)
T ss_pred cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc-----CcccC
Confidence 01112223344566788899999999999999999998 78874
No 230
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9e-37 Score=308.73 Aligned_cols=263 Identities=19% Similarity=0.251 Sum_probs=196.2
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCe-----
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIK-HENIVRIIGYCHSKEM----- 321 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~----- 321 (549)
++|+..+.||+|+||.||++.. .+|+.+|+|.++.... ....+.+|+.+++.+. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3688899999999999999987 5689999999865432 2356788999999995 6999999999876665
Q ss_pred EEEEEeccCCCHHHHHHH--------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecc
Q 008898 322 YAIVYNLLNGSLKQYLKQ--------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGA 393 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~--------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGl 393 (549)
++++|||+.++|.+++.. +++.....++.||++||.|||+. +|+||||||+||+++.+.+.++|+|||+
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeeccc
Confidence 899999999899988843 46778889999999999999999 9999999999999998337899999999
Q ss_pred ccccccccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc
Q 008898 394 AMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS 472 (549)
Q Consensus 394 a~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 472 (549)
+....... .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.......+... ........
T Consensus 158 ~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~ 231 (295)
T cd07837 158 GRAFSIPV-----KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLH-IFKLLGTP 231 (295)
T ss_pred ceecCCCc-----cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHHHhCCC
Confidence 86442211 11122356889999998875 4578999999999999999999999976543222111 11111000
Q ss_pred cc--ccccc-------CCc----ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 473 GL--CERLI-------DPQ----LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 473 ~~--~~~~~-------d~~----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
.. ..... .+. ............+.+++..||..||.+||++.+++. |+|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~-----~~~~~ 295 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT-----HPYFD 295 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc-----CCCcC
Confidence 00 00000 000 000001123456788999999999999999999999 89874
No 231
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-37 Score=314.56 Aligned_cols=250 Identities=25% Similarity=0.417 Sum_probs=193.6
Q ss_pred cCCCCCceEcccCceEEEEEEec--------CCcEEEEEEeecCCc--CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCC
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV--------DGQVAAVKVLKCTNW--SEEEVLREVELLSSI-KHENIVRIIGYCHSKE 320 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 320 (549)
++|.+.+.||+|+||.||++... ....+|+|.++.... ...++..|+.+++.+ +||||+++++++..++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 56888999999999999999642 245789999875432 234678899999999 6999999999999989
Q ss_pred eEEEEEecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEe
Q 008898 321 MYAIVYNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLS 380 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~ 380 (549)
.++++|||+ +|+|.+++.. +++.....++.||+.||.|||++ +|+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 999999999 6899999854 55667788999999999999999 999999999999999
Q ss_pred cCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccch
Q 008898 381 ENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANR 459 (549)
Q Consensus 381 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~ 459 (549)
.+ +.+||+|||++......... .......+++.|+|||.+.++.++.++|||||||++|||++ |..||.......
T Consensus 169 ~~-~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 169 ED-NVMKIADFGLARGVHDIDYY---KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred CC-CcEEEccccccccccccccc---cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 88 68999999998654322111 11112234567999999998899999999999999999999 888886543211
Q ss_pred hhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 460 ESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 460 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
+. .... .+.. . ..+......+.+++.+|+..+|.+|||+.++++.|++.
T Consensus 245 --~~---~~~~-~~~~-----~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 245 --LF---KLLR-EGHR-----M----DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred --HH---HHHH-cCCC-----C----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11 1111 1110 0 11122344677899999999999999999999988643
No 232
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.2e-37 Score=302.85 Aligned_cols=243 Identities=24% Similarity=0.322 Sum_probs=195.4
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC--cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN--WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
+|+..+.||+|+||.||++.. .+++.+|+|.++... ...+.+.+|+.+++.++|+||+++++++..++.++++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 477889999999999999987 468999999986433 23356788999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 330 -NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 330 -~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+|+|.+++.. ++......++.|++.||.|||+. +|+|+||||+||+++++ +.++|+|||++......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~--- 153 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQN-GKVKLGDFGSARLLTSP--- 153 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCC-CcEEEcccCcceeeccc---
Confidence 6789988854 56777888999999999999999 99999999999999988 68999999998654321
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||........ ..... .+...
T Consensus 154 --~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-----~~~~~-~~~~~------- 218 (255)
T cd08219 154 --GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-----ILKVC-QGSYK------- 218 (255)
T ss_pred --ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-----HHHHh-cCCCC-------
Confidence 1122345689999999999988899999999999999999999999976543211 11111 11111
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKL 519 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 519 (549)
..+......+.+++.+||..||.+||++.+++..
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 --PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1112233457788999999999999999999873
No 233
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=6.3e-37 Score=307.71 Aligned_cols=250 Identities=22% Similarity=0.388 Sum_probs=192.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCc----EEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQ----VAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
++|...+.||+|+||.||+|.+ .+|. .||+|+++.... ....+.+|+.+++.++||||+++++++.... .++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTST-VQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCC-cEE
Confidence 5688899999999999999975 4454 489999875432 2356788999999999999999999997654 567
Q ss_pred EEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
+++++ +|+|.+++.. +++...+.++.||+.||.|||+. +|+||||||+|||++++ +.+||+|||++.....
T Consensus 86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~-~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSP-NHVKITDFGLARLLDI 161 (279)
T ss_pred EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCC-CcEEECCCCceeeccc
Confidence 78877 7899999854 57788899999999999999999 99999999999999888 6899999999876532
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .+..+.. .+.
T Consensus 162 ~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~----~~~---- 228 (279)
T cd05109 162 DETE---YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDLLE----KGE---- 228 (279)
T ss_pred ccce---eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH----CCC----
Confidence 2111 11112235678999999998999999999999999999998 89998654321 1211111 110
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
.+. ........+.+++..||..||.+||++.++++.|+...
T Consensus 229 -~~~----~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 229 -RLP----QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred -cCC----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 000 11123446778899999999999999999998775443
No 234
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=5.9e-37 Score=309.19 Aligned_cols=256 Identities=29% Similarity=0.394 Sum_probs=196.9
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|...+.||+|+||.||++.+ .+++.+|+|.+..... ....+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 455667899999999999977 5689999999875432 2346788999999996 99999999999988999999999
Q ss_pred cCCCHHHHHH--------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 329 LNGSLKQYLK--------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 329 ~~gsL~~~l~--------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+.++|.++.. .+++.....++.+++.||.|||+.+ +|+||||||+||+++.+ +.++|+|||++......
T Consensus 85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRN-GNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccC-CcEEEeecchhHHhccC
Confidence 9887766542 2566778899999999999999732 89999999999999988 68999999998654321
Q ss_pred cccccCccccccccCCccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYG---KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~---~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
.......|++.|+|||++.+. .++.++|||||||++|||++|+.||.......+.+ . .... +
T Consensus 162 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~-~~~~-~---- 226 (288)
T cd06616 162 ------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQL---T-QVVK-G---- 226 (288)
T ss_pred ------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHH---h-hhcC-C----
Confidence 111234688999999998866 68999999999999999999999997543211111 1 1100 0
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
..+.+...........+.+++..||..+|.+|||+.+|++ |+|++....
T Consensus 227 -~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~-----~~~~~~~~~ 275 (288)
T cd06616 227 -DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE-----HPFIKDYEE 275 (288)
T ss_pred -CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc-----Chhhhchhh
Confidence 0111211112234556888999999999999999999999 899976543
No 235
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.1e-37 Score=325.18 Aligned_cols=250 Identities=23% Similarity=0.379 Sum_probs=194.2
Q ss_pred cCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIK-HENIVRIIGYCHSKEMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~ 322 (549)
++|.+.+.||+|+||.||+|.+. .++.||+|+++..... ...+.+|+.+|.++. ||||++++++|...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 45778889999999999999753 3468999999765322 246889999999997 99999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH--------------------------------------------------------------
Q 008898 323 AIVYNLL-NGSLKQYLKQ-------------------------------------------------------------- 339 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~-------------------------------------------------------------- 339 (549)
++||||+ +|+|.+++.+
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 9999999 7899999853
Q ss_pred ---------------------------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEe
Q 008898 340 ---------------------------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLS 380 (549)
Q Consensus 340 ---------------------------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~ 380 (549)
+++.....++.||+.||.|||+. +|+||||||+|||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEe
Confidence 23345677889999999999998 999999999999999
Q ss_pred cCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccch
Q 008898 381 ENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANR 459 (549)
Q Consensus 381 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~ 459 (549)
++ +.++|+|||++......... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 274 ~~-~~~kL~DfGla~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 274 EG-KLVKICDFGLARDIMRDSNY---ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred CC-CEEEEEecCcceeccccccc---ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 88 68999999998654321111 11123457889999999998889999999999999999998 889986543322
Q ss_pred hhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 460 ESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 460 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. + ..... .+. .+. .+......+.+++..||..+|..||++++|++.|++
T Consensus 350 ~-~---~~~~~-~~~-----~~~----~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 350 Q-F---YNAIK-RGY-----RMA----KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred H-H---HHHHH-cCC-----CCC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1 1 11111 110 011 111234568888999999999999999999998864
No 236
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.8e-37 Score=304.84 Aligned_cols=253 Identities=28% Similarity=0.411 Sum_probs=202.1
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
+|+..+.||.|+||.||++.+. +++.+|+|.+..... ...++.+|+++++.++||||+++++++..++.+++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777888999999999999874 689999999876532 2356889999999999999999999999999999999999
Q ss_pred C-CCHHHHHHH----hchhHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 330 N-GSLKQYLKQ----LKWNERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 330 ~-gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
. ++|.+++.. ++......++.|+++||.|||+ . +++|+||||+||+++.+ +.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~-~~~~l~d~g~~~~~~~~~-- 155 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSR-GQIKLCDFGVSGQLVNSL-- 155 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCC-CCEEEeecccchhhHHHH--
Confidence 5 799999864 4667778899999999999999 7 99999999999999998 689999999985442211
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
.....|+..|+|||.+.+..++.++|||||||++|+|++|..||.......+............. .+.+
T Consensus 156 -----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~ 224 (265)
T cd06605 156 -----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP------PPRL 224 (265)
T ss_pred -----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC------CCCC
Confidence 11257889999999999889999999999999999999999999765322222222222221111 1111
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
.. ......+.+++..||..||.+|||+.+++. |+||+.+
T Consensus 225 ~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~-----~~~~~~~ 263 (265)
T cd06605 225 PS---GKFSPDFQDFVNLCLIKDPRERPSYKELLE-----HPFIKKY 263 (265)
T ss_pred Ch---hhcCHHHHHHHHHHcCCCchhCcCHHHHhh-----Cchhhcc
Confidence 11 114455788899999999999999999998 8999653
No 237
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2e-36 Score=300.17 Aligned_cols=247 Identities=28% Similarity=0.402 Sum_probs=197.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
++|...+.||+|+||.||++.. .+++.+++|++..... ..+.+.+|+.+++.++||||+++++++..++.++++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 5788999999999999999987 4678999999976543 3456889999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 -NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 -~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+++|.+++.. ++......++.|++.||.|||+. +|+|+||+|+||+++.+ +.++|+|||++.......
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~--- 155 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTED-GDVKLADFGVSAQLTATI--- 155 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCC-CCEEECccccchhhhhhh---
Confidence 5689888843 57778888999999999999998 99999999999999988 689999999986543211
Q ss_pred cCccccccccCCccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYG---KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~---~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.......|+..|+|||.+.+. .++.++|+|||||++|+|++|..||........... .. .. ....+
T Consensus 156 --~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~-~~----~~----~~~~~ 224 (262)
T cd06613 156 --AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL-IS----KS----NFPPP 224 (262)
T ss_pred --hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HH----hc----cCCCc
Confidence 122345688999999998876 789999999999999999999999976543222111 10 00 00001
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.+ .........+.+++.+||..+|.+|||+.+|+.
T Consensus 225 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 225 KL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11 112334566888999999999999999999997
No 238
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.1e-37 Score=301.64 Aligned_cols=242 Identities=26% Similarity=0.410 Sum_probs=195.9
Q ss_pred ceEcccCceEEEEEEecC----CcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNHVD----GQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~----g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+.||+|+||.||++.... +..+++|.++..... .+.+.+|+++++.++|+||+++++++..+..++++|||+ +
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 369999999999997743 789999999866543 467889999999999999999999999999999999999 7
Q ss_pred CCHHHHHHH------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 331 GSLKQYLKQ------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 331 gsL~~~l~~------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
|+|.+++.. +++.....++.|++.||.|||++ +++|+||||+||+++.+ +.++|+|||.+....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~-~~~~l~dfg~~~~~~ 156 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGED-LVVKISDFGLSRDVY 156 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCC-CcEEEcccccccccc
Confidence 899999864 46788899999999999999998 99999999999999998 689999999987654
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
.... ........+++.|+|||.+....++.++|||||||++|||++ |..||....... + ...... +.
T Consensus 157 ~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~---~~~~~~-~~--- 224 (262)
T cd00192 157 DDDY---YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE--V---LEYLRK-GY--- 224 (262)
T ss_pred cccc---cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH--H---HHHHHc-CC---
Confidence 3221 122234567889999999998899999999999999999999 699997663221 1 111111 10
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
.. ..+......+.+++..|+..+|.+|||+.++++.|+
T Consensus 225 --~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 --RL----PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --CC----CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 01 112222456888899999999999999999999774
No 239
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.1e-36 Score=306.45 Aligned_cols=250 Identities=26% Similarity=0.342 Sum_probs=195.6
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
|++.+.||+|+||.||++.. .++..+++|.+..... ..+.+.+|+++++.++||||+++++++..++.+++++||+ +
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 56677899999999999987 4578899999865432 2356788999999999999999999999999999999999 6
Q ss_pred CCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 331 GSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 331 gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
|+|..++.. +++..+..++.|+++||.|||+. +|+||||||+|||++.+ +.++|+|||++...... .
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~-~~~kl~dfg~~~~~~~~-----~ 157 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRT-----I 157 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccC-CCEEEcccccccccccc-----c
Confidence 688887743 67788899999999999999999 99999999999999988 68999999998543221 1
Q ss_pred ccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 407 VKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.......||+.|+|||++. +..++.++|||||||++|||++|++||........ ..... .. ......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~----~~-~~~~~~-- 229 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-LLKIA----KS-EPPTLA-- 229 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-HHHHh----hc-CCCCCC--
Confidence 1223456899999999984 34578899999999999999999999976543211 11110 00 000010
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
.+......+.+++..||..||.+||++.++++ |+|++..
T Consensus 230 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~-----~~~~~~~ 268 (282)
T cd06643 230 -----QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ-----HPFVTVN 268 (282)
T ss_pred -----CccccCHHHHHHHHHHccCChhhCcCHHHHhc-----CCCEecc
Confidence 11223456788899999999999999999998 8998753
No 240
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-37 Score=292.18 Aligned_cols=244 Identities=27% Similarity=0.373 Sum_probs=189.9
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC--HHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEEecc
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS--EEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
.+....||.|+.|.|+++.+ .+|...|||.+...... .+.+++.+.++..-+ .|+||+.+|||..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 34455699999999999987 56899999999765433 346778888776655 899999999999999999999998
Q ss_pred CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 ~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
..-++..+++ +++.-.-++..-+..||.||.++| +|||||+||+|||+|+. |++||||||.+-..- +
T Consensus 174 s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~-GniKlCDFGIsGrlv------d 244 (391)
T KOG0983|consen 174 STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDER-GNIKLCDFGISGRLV------D 244 (391)
T ss_pred HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccC-CCEEeecccccceee------c
Confidence 7655665543 455555678888999999999986 99999999999999999 899999999985433 2
Q ss_pred CccccccccCCcccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMY---GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
........|.+.|||||.+.- ..|+..+||||||+.++||.||+.||...+.+.+.+-... ++. -|.
T Consensus 245 SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvl---------n~e-PP~ 314 (391)
T KOG0983|consen 245 SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVL---------NEE-PPL 314 (391)
T ss_pred ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHH---------hcC-CCC
Confidence 333345579999999999863 4689999999999999999999999988665554332211 111 133
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
+++... ....+.+++..||++|+++||.+.++++
T Consensus 315 L~~~~g--FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 315 LPGHMG--FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCcccC--cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 332211 3345666778999999999999999987
No 241
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.5e-36 Score=305.41 Aligned_cols=261 Identities=21% Similarity=0.337 Sum_probs=200.5
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|.+.+.||+|+||.||+|.. .+|+.+|+|++..... ....+.+|+.+++.++||||+++++++..++.+++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 477888999999999999987 5689999999976542 235688999999999999999999999999999999999
Q ss_pred cCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
++++|.+++.. +++.++..++.||++||.|||+. +++|+||||+||+++.+ +.++|+|||++........
T Consensus 81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~-~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISAD-GVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCC-CcEEEeeeeecccccCCCC--
Confidence 98899999854 67888899999999999999999 99999999999999998 6899999999865433211
Q ss_pred cCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc----------
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG---------- 473 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~---------- 473 (549)
.......|+..|+|||.+.+.. ++.++|||||||++|||++|.+||...... ..+...........
T Consensus 155 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 155 --RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred --CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhhccCc
Confidence 1123456899999999987554 689999999999999999998888654431 11111111100000
Q ss_pred -ccccccCCccc----ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 474 -LCERLIDPQLN----EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 474 -~~~~~~d~~l~----~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.......+... .....+....+.+++.+|+..+|.+|||++++++ |+||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~-----h~~~ 285 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR-----HPYF 285 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh-----CcCc
Confidence 00000000000 0011123477889999999999999999999999 8887
No 242
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.3e-36 Score=300.00 Aligned_cols=242 Identities=27% Similarity=0.402 Sum_probs=191.6
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHH
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLK 334 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~ 334 (549)
++||+|+||.||++...+++.+|+|.++..... ...+.+|++++++++|+||+++++++...+..+++|||+ +++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999998866999999998765432 356889999999999999999999999999999999999 67899
Q ss_pred HHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcccc
Q 008898 335 QYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPV 410 (549)
Q Consensus 335 ~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 410 (549)
+++.. +++.....++.+++.||.|||++ +++||||||+|||++.+ +.++|+|||++......... ....
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~-~~~~l~d~g~~~~~~~~~~~---~~~~ 153 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGEN-NVLKISDFGMSREEEGGIYT---VSDG 153 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCC-CcEEEeeccccccccCCcce---eccc
Confidence 99854 56677788999999999999999 99999999999999988 68999999998654321110 0111
Q ss_pred ccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCH
Q 008898 411 NVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNR 489 (549)
Q Consensus 411 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 489 (549)
...++..|+|||.+.++.++.++|+|||||++|||++ |..||........ .. ... .+ .....+.
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~--~~---~~~-~~---------~~~~~~~ 218 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT--RE---RIE-SG---------YRMPAPQ 218 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH--HH---HHh-cC---------CCCCCCc
Confidence 2234567999999998899999999999999999999 8888866543211 11 110 00 0011122
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 490 EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 490 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
..+..+.+++.+|+..+|.+|||+.++++.|+
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 33457888999999999999999999999876
No 243
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.9e-36 Score=303.20 Aligned_cols=261 Identities=23% Similarity=0.346 Sum_probs=197.9
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
++|+..+.||+|+||.||++... +|+.+|+|++..... ..+.+.+|+.+++.++||||+++++++..++.++++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999874 689999999865432 23457889999999999999999999999999999999
Q ss_pred ccCCC-HHHHHH---HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGS-LKQYLK---QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gs-L~~~l~---~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.++ |..++. .+++..+..++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQ-GQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCC-CcEEECccccceecCCCcc-
Confidence 99654 555543 377888999999999999999998 99999999999999988 6899999999865433211
Q ss_pred ccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc-----------
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS----------- 471 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~----------- 471 (549)
......++..|+|||.+.+ ..++.++|||||||++|+|++|..||......+ .+..+......
T Consensus 156 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07847 156 ----DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIRKTLGDLIPRHQQIFST 230 (286)
T ss_pred ----cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHhhhccc
Confidence 1223457889999999876 457899999999999999999999998655322 12111111100
Q ss_pred ccccccccCCcccccCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 472 SGLCERLIDPQLNEEYN-----REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 472 ~~~~~~~~d~~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.........+......+ ......+.+++..||..+|.+||++.++++ |+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~-----~~~f 286 (286)
T cd07847 231 NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE-----HPYF 286 (286)
T ss_pred ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc-----CCCC
Confidence 00001111111111001 122456788999999999999999999998 7876
No 244
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.2e-36 Score=307.93 Aligned_cols=261 Identities=23% Similarity=0.280 Sum_probs=199.3
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcC--CeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSK--EMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv 325 (549)
++|+..+.||.|+||.||+|... +++.+|+|.++..... ...+.+|+.+++.++||||+++++++... +.++++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999874 6889999999755422 23467899999999999999999998777 899999
Q ss_pred EeccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+||+.++|.+++.. +++.....++.||+.||.|||+. +++|+||||+|||++.+ +.++|+|||++.......
T Consensus 85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNR-GILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCC-CcEEEeecCceeeccCCc
Confidence 99999999988854 67888899999999999999999 99999999999999998 789999999986543321
Q ss_pred ccccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh----------
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL---------- 470 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~---------- 470 (549)
.......+++.|+|||.+.+.. ++.++|+|||||++|+|++|.+||........ +........
T Consensus 161 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (293)
T cd07843 161 -----KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIFKLLGTPTEKIWPGF 234 (293)
T ss_pred -----cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHh
Confidence 1122345788999999987654 68999999999999999999999976543221 111000000
Q ss_pred --cc----cccccccCCcccccCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 471 --SS----GLCERLIDPQLNEEYNRE-EIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 471 --~~----~~~~~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.. ..........+...++.. ..+.+.++++.||+.+|++|||+.|+++ |+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~-----~~~f 293 (293)
T cd07843 235 SELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK-----HPYF 293 (293)
T ss_pred hccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc-----CCCC
Confidence 00 000000011111112221 3556788999999999999999999998 7886
No 245
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.5e-37 Score=309.72 Aligned_cols=254 Identities=26% Similarity=0.391 Sum_probs=194.5
Q ss_pred CCCCCceEcccCceEEEEEEe-----cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC--CeEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-----VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSK--EMYA 323 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-----~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~ 323 (549)
.|...+.||+|+||.||++.. .++..+|+|.++.... ....+.+|+.+++.++||||+++++++... ..++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467888999999999999963 3578999999875432 235688999999999999999999998765 6789
Q ss_pred EEEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 324 IVYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 324 lv~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
++|||+ +++|.+++.+ +++..+..++.||+.||.|||++ +|+||||||+||+++.+ +.++|+|||++....
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~-~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESE-HQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCC-CCEEECCCccccccc
Confidence 999999 7899999853 67888899999999999999999 99999999999999998 689999999987654
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc----------hhhHHHHHHH
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN----------RESLVLWARS 468 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~----------~~~l~~~~~~ 468 (549)
...... .......|+..|+|||.+.+..++.++|||||||++|||++++.|....... ......+...
T Consensus 161 ~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 161 TDKEYY--TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cCccce--eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 322111 1112345777899999999888999999999999999999988765332110 0001111111
Q ss_pred hhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 469 LLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 469 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. ..+. ...........+.+++.+|++.||.+|||+.++++.|+.
T Consensus 239 ~-~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 239 L-EEGK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred H-HcCc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 1 0000 001112234578889999999999999999999998764
No 246
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.8e-37 Score=304.68 Aligned_cols=250 Identities=21% Similarity=0.337 Sum_probs=195.5
Q ss_pred cCCCCCceEcccCceEEEEEEec-C---CcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-D---GQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~---g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
.+|.+.+.||+|+||.||+|... + +..+|+|.++..... .+.+.+|+.+++.++||||+++++++..++..+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888999999999999999763 2 337999998754322 34678899999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|||+ +|+|.+++.. +++.+.+.++.|++.||.|||+. +++||||||+|||++.+ +.++|+|||++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~-~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSN-LVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCC-CeEEeCCCCcccccccc
Confidence 9999 6789999864 57778899999999999999999 99999999999999988 68999999998654331
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
... ........++..|+|||.+.++.++.++|+|||||++||+++ |..||......+ ... .+.....
T Consensus 160 ~~~--~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~---~~~~~~~----- 227 (267)
T cd05066 160 PEA--AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIK---AIEEGYR----- 227 (267)
T ss_pred cce--eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHH---HHhCCCc-----
Confidence 110 011112233568999999998899999999999999999886 999997654321 111 1111100
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. ......+..+.+++.+|++.+|.+||++.++++.|+.
T Consensus 228 -~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 228 -L----PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred -C----CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 0 1112234567889999999999999999999998864
No 247
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.5e-37 Score=308.27 Aligned_cols=259 Identities=26% Similarity=0.356 Sum_probs=193.4
Q ss_pred cCCCCCceEcccCceEEEEEEe-----cCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEc--CCeEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-----VDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHS--KEMYA 323 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~ 323 (549)
++|++.+.||+|+||.||++.. .+++.+|+|.++..... .+.+.+|+++++.++||||+++++++.. ...++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4788899999999999999864 35789999998755422 3567899999999999999999998743 45789
Q ss_pred EEEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 324 IVYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 324 lv~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
+++||+ +|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+||+++++ +.++|+|||++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~-~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESE-NRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCC-CeEEECCCccccccc
Confidence 999999 7899999853 67788899999999999999999 99999999999999998 689999999987653
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc----
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL---- 474 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~---- 474 (549)
...... .......++..|+|||++.+..++.++|||||||++|||++|..|+...... +.........
T Consensus 160 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 231 (284)
T cd05081 160 QDKEYY--KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE------FMRMMGNDKQGQMI 231 (284)
T ss_pred CCCcce--eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh------hhhhcccccccccc
Confidence 321110 0111123445699999999889999999999999999999998776433211 0000000000
Q ss_pred ---cccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 475 ---CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 475 ---~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..+.+...............+.+++.+||..+|++|||+.+|++.|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 232 VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 000011111111122334568889999999999999999999998864
No 248
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9e-37 Score=307.52 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=198.3
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+..+.||+|+||.||++... +|+.+|+|.++.... ....+.+|+.++++++||||+++++++..++.++++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999874 789999999875422 235688999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 329 L-NGSLKQYLKQ------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 329 ~-~gsL~~~l~~------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+ +++|..++.. +++.....++.|++.||.|||+.+ +|+|+||||+||+++.+ +.++|+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGN-GQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCC-CCEEEeecCCcccccCC-
Confidence 9 5689888854 677788999999999999999632 89999999999999997 68999999998543221
Q ss_pred ccccCccccccccCCccccccccccCC------CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccc
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGK------VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLC 475 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~------~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 475 (549)
......|++.|+|||.+.+.. ++.++|+|||||++|+|++|+.||....... ...... .
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~-~------- 221 (286)
T cd06622 157 ------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQLS-A------- 221 (286)
T ss_pred ------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHHHH-H-------
Confidence 122346888999999985443 5789999999999999999999997543211 111100 0
Q ss_pred ccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 476 ERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 476 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
..+.. ....+......+.+++.+||..+|.+||++.++++ |+|+....
T Consensus 222 --~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~-----~~~~~~~~ 269 (286)
T cd06622 222 --IVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE-----HPWLVKYK 269 (286)
T ss_pred --HhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc-----Chhhhhcc
Confidence 01100 01122334566778889999999999999999998 89986654
No 249
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.7e-37 Score=318.76 Aligned_cols=250 Identities=26% Similarity=0.386 Sum_probs=191.0
Q ss_pred cCCCCCceEcccCceEEEEEEe------cCCcEEEEEEeecCCcC--HHHHHHHHHHHhcC-CCCCeeeEEEEEEc-CCe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH------VDGQVAAVKVLKCTNWS--EEEVLREVELLSSI-KHENIVRIIGYCHS-KEM 321 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l-~h~nIv~l~~~~~~-~~~ 321 (549)
++|++.+.||+|+||.||+|.. .+++.||||+++..... ...+.+|+.++.++ +||||+++++++.. +..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5799999999999999999963 34789999999754322 34578899999999 68999999998854 456
Q ss_pred EEEEEecc-CCCHHHHHHH-------------------------------------------------------------
Q 008898 322 YAIVYNLL-NGSLKQYLKQ------------------------------------------------------------- 339 (549)
Q Consensus 322 ~~lv~e~~-~gsL~~~l~~------------------------------------------------------------- 339 (549)
++++|||+ +|+|.+++..
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 88999999 7899988743
Q ss_pred ---------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcccc
Q 008898 340 ---------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPV 410 (549)
Q Consensus 340 ---------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 410 (549)
+++.....++.||++||.|||++ +|+||||||+|||++.+ +.++|+|||++........ .....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~-~~~kl~dfg~~~~~~~~~~---~~~~~ 239 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPD---YVRKG 239 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCC-CcEEEEecccccccccCcc---hhhcC
Confidence 34556678899999999999999 99999999999999988 6899999999865422111 11112
Q ss_pred ccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCH
Q 008898 411 NVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNR 489 (549)
Q Consensus 411 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 489 (549)
...+++.|+|||.+.+..++.++|||||||++|+|++ |..||.......... ... ..+.. ...+...
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~----~~~-~~~~~-----~~~~~~~-- 307 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC----RRL-KEGTR-----MRAPDYT-- 307 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHH----HHH-hccCC-----CCCCCCC--
Confidence 2345678999999998899999999999999999997 899987543322111 111 11110 1111112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 490 EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 490 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
...+.+++..||+.||.+|||+.+|++.|+.
T Consensus 308 --~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~ 338 (343)
T cd05103 308 --TPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 338 (343)
T ss_pred --CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 2347788899999999999999999998754
No 250
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.5e-36 Score=308.10 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=199.6
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
..|...+.||+|+||.||++.. .+|+.+|+|.+...... ..++.+|+++++.++||||++++++|..++..++++
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4688889999999999999977 46899999998644321 245788999999999999999999999999999999
Q ss_pred eccCCCHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLLNGSLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~~gsL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+.|+|.+++. .+++.....++.|++.||.|||+. +|+|+||+|+||+++.+ +.++|+|||++.....
T Consensus 95 e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~-~~~kL~dfg~~~~~~~--- 167 (307)
T cd06607 95 EYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEP-GTVKLADFGSASLVSP--- 167 (307)
T ss_pred HhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCC-CCEEEeecCcceecCC---
Confidence 999999888774 267788889999999999999999 99999999999999998 6899999999854322
Q ss_pred cccCccccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
.....|++.|+|||++. .+.++.++||||||+++|||++|..||........ .. .... +.
T Consensus 168 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-~~----~~~~-~~----- 230 (307)
T cd06607 168 ------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LY----HIAQ-ND----- 230 (307)
T ss_pred ------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-HH----HHhc-CC-----
Confidence 12346888999999874 45688999999999999999999999875432211 10 0000 00
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
.+. .........+.+++..||..+|.+||++.+|++ |+|+.....
T Consensus 231 ~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~-----~~~~~~~~~ 275 (307)
T cd06607 231 SPT---LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK-----HRFVLRERP 275 (307)
T ss_pred CCC---CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc-----ChhhcccCC
Confidence 011 112234567889999999999999999999998 789866653
No 251
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.4e-36 Score=340.28 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=193.0
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...++||+|+||.||+|.+ .+|+.+|+|+++.... ..+.+.+|+.+++.++||||+++++++.+++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4788999999999999999987 4689999999975422 1346889999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH--------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeee
Q 008898 327 NLL-NGSLKQYLKQ--------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDF 391 (549)
Q Consensus 327 e~~-~gsL~~~l~~--------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DF 391 (549)
||+ +|+|.+++.. .++...+.++.||++||.|||+. +|+||||||+|||++.+ +.++|+||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~d-g~vKLiDF 157 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLF-GEVVILDW 157 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCC-CCEEEEec
Confidence 999 6799998853 22345678899999999999999 99999999999999988 68999999
Q ss_pred ccccccccccc-------------cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc
Q 008898 392 GAAMVHHQSHQ-------------VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN 458 (549)
Q Consensus 392 Gla~~~~~~~~-------------~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~ 458 (549)
|++........ ..........+||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 99976521110 00011122357999999999999999999999999999999999999999764322
Q ss_pred hhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHh
Q 008898 459 RESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT-MKTLLKLF 520 (549)
Q Consensus 459 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-~~evl~~L 520 (549)
.... .. ...++..... ..+.+..+.+++.+|+..||.+||+ ++++++.|
T Consensus 238 ki~~---~~---------~i~~P~~~~p-~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~L 287 (932)
T PRK13184 238 KISY---RD---------VILSPIEVAP-YREIPPFLSQIAMKALAVDPAERYSSVQELKQDL 287 (932)
T ss_pred hhhh---hh---------hccChhhccc-cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1100 00 0111110000 1123456778889999999999965 55555543
No 252
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.3e-37 Score=313.28 Aligned_cols=245 Identities=25% Similarity=0.400 Sum_probs=189.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCc--EEEEEEeecCC--cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQ--VAAVKVLKCTN--WSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~--~~AvK~l~~~~--~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv 325 (549)
++|++.+.||+|+||.||+|.+ .++. .+|+|.++... .....+.+|++++.++ +||||+++++++..++.++++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 4788899999999999999986 3454 45777765432 2234678899999999 899999999999999999999
Q ss_pred Eecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCc
Q 008898 326 YNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHH 385 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~ 385 (549)
|||+ +|+|.+++.. +++...+.++.||+.||.|||++ +|+||||||+|||++.+ +.
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~-~~ 162 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN-YV 162 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC-Cc
Confidence 9999 6899999853 45677889999999999999999 99999999999999988 68
Q ss_pred eEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHH
Q 008898 386 PQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVL 464 (549)
Q Consensus 386 ~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~ 464 (549)
++|+|||++..... ........++..|+|||++.+..++.++|||||||++|||+| |..||....... .
T Consensus 163 ~kl~dfg~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~-- 232 (303)
T cd05088 163 AKIADFGLSRGQEV------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--L-- 232 (303)
T ss_pred EEeCccccCcccch------hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--H--
Confidence 99999999843211 011111234667999999988889999999999999999998 999996543321 1
Q ss_pred HHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 465 WARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 465 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
..... .+. .... +......+.+++.+|++.+|.+||++.++++.|.
T Consensus 233 -~~~~~-~~~-----~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 233 -YEKLP-QGY-----RLEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred -HHHHh-cCC-----cCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 000 0011 1112345788999999999999999999998764
No 253
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.6e-37 Score=308.55 Aligned_cols=254 Identities=26% Similarity=0.378 Sum_probs=199.8
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+..+.||+|+||.||++.. .+|+.+|+|++..... ..+.+.+|+++++.++||||+++++++...+.++++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4678888999999999999976 5689999998865432 245788999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+ +|+|.+++.. +++.....++.+++.||.|||+.+ +++|+||||+||+++.+ +.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~-~~~~l~d~gl~~~~~~~---- 157 (284)
T cd06620 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSR-GQIKLCDFGVSGELINS---- 157 (284)
T ss_pred CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCC-CcEEEccCCcccchhhh----
Confidence 9 6789888854 567788899999999999999742 89999999999999988 68999999987543211
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchh------hHHHHHHHhhcccccccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRE------SLVLWARSLLSSGLCERL 478 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~------~l~~~~~~~~~~~~~~~~ 478 (549)
......|+..|+|||++.++.++.++|+|||||++|+|++|+.||.......+ .+..+........
T Consensus 158 ---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 229 (284)
T cd06620 158 ---IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP----- 229 (284)
T ss_pred ---ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-----
Confidence 11245789999999999888999999999999999999999999986543211 1111111111110
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
.+.+. ....+..+.+++.+|+..||.+|||+.++++ +.|+..
T Consensus 230 -~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~-----~~~~~~ 271 (284)
T cd06620 230 -PPRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCA-----MPPFIQ 271 (284)
T ss_pred -CCCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhc-----Cccccc
Confidence 01111 1124456888999999999999999999998 556544
No 254
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.3e-36 Score=303.19 Aligned_cols=260 Identities=26% Similarity=0.321 Sum_probs=199.7
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEc--CCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHS--KEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~ 326 (549)
++|...+.||.|++|.||++.. .+++.+|+|.+..... ....+.+|+++++.++||||++++++|.+ .+.++++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 3678888999999999999987 5689999999875433 23568899999999999999999998854 44789999
Q ss_pred ecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 327 NLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 327 e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
||+ +++|.+++.. ++......++.||+.||.|||+. +++|+||+|+||+++.+ +.++|+|||++....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~ 156 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRK-GQVKLCDFGVSGELV 156 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecC-CeEEEeecccccccc
Confidence 999 6789888743 56667788999999999999999 99999999999999988 689999999985432
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.. ......++..|+|||.+.+..++.++|||||||++|+|++|..||............+........ ...+
T Consensus 157 ~~-------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 228 (287)
T cd06621 157 NS-------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP-NPEL 228 (287)
T ss_pred cc-------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC-chhh
Confidence 21 112345788999999999899999999999999999999999999866321111111111111100 0011
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
.+. . .........+.+++.+||..+|.+|||+.|+++ |+|++...
T Consensus 229 ~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~-----~~~~~~~~ 273 (287)
T cd06621 229 KDE-P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE-----HPWIKAQM 273 (287)
T ss_pred ccC-C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh-----Cccccccc
Confidence 000 0 001223567889999999999999999999999 89985443
No 255
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.8e-36 Score=302.88 Aligned_cols=253 Identities=24% Similarity=0.404 Sum_probs=196.6
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC-----------HHHHHHHHHHHhcCCCCCeeeEEEEEEcCC
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS-----------EEEVLREVELLSSIKHENIVRIIGYCHSKE 320 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~-----------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 320 (549)
+|...+.||.|+||.||+|.. .+|+.+|+|.++..... .+.+..|+.+++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999976 56899999988642110 134678999999999999999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 321 MYAIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
.++++|||+ +|+|.+++.. +++..+..++.||+.||.|||+. +++|+||+|+||+++.+ +.++|+|||++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~-~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDAD-GICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCC-CeEEEeecccccc
Confidence 999999999 7799999865 66777888999999999999998 99999999999999988 6899999999865
Q ss_pred cccccccccCccccccccCCccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYLAPEYMMYGK--VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL 474 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 474 (549)
.... ..........|+..|+|||.+.... ++.++|+||||+++|+|++|..||........ . .. ....
T Consensus 158 ~~~~---~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~---~~-~~~~-- 227 (272)
T cd06629 158 SDDI---YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA-M---FK-LGNK-- 227 (272)
T ss_pred cccc---ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH-H---HH-hhcc--
Confidence 3321 1111223456889999999987654 78999999999999999999999964332111 1 11 0001
Q ss_pred cccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 475 CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 475 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
...+.............+.+++..|+..+|.+|||+.++++ |+|+
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~-----~~~~ 272 (272)
T cd06629 228 ---RSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ-----HPFI 272 (272)
T ss_pred ---ccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh-----CCCC
Confidence 01111111222234567888889999999999999999999 7775
No 256
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.2e-36 Score=306.10 Aligned_cols=266 Identities=21% Similarity=0.286 Sum_probs=199.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
++|+..+.||+|+||.||+|.. .+|+.+|+|.+..... ....+.+|+++++.++||||+++++++..++.+++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4688899999999999999987 4689999999865432 23567889999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 328 LLNGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 328 ~~~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
|+.++|.+++.. +++.....++.||+.||.|||++ +++|+||+|+||+++.+.+.+||+|||++......
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~-- 156 (294)
T PLN00009 82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-- 156 (294)
T ss_pred cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC--
Confidence 999899888854 34556678999999999999999 99999999999999865457899999998543221
Q ss_pred cccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--cc-----
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--GL----- 474 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~----- 474 (549)
........|++.|+|||.+.+. .++.++|||||||++|+|++|++||............+. ..... ..
T Consensus 157 ---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 232 (294)
T PLN00009 157 ---VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFR-ILGTPNEETWPGVT 232 (294)
T ss_pred ---ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HhCCCChhhccccc
Confidence 1111234578899999988764 578999999999999999999999976543222111110 00000 00
Q ss_pred -ccccc--CCccc----ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 475 -CERLI--DPQLN----EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 475 -~~~~~--d~~l~----~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
+..+. .+... ..........+.+++.+|++.+|++||++.++++ |+||....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~-----~~~~~~~~ 291 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE-----HEYFKDLG 291 (294)
T ss_pred cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc-----CchHhHHh
Confidence 00000 00000 0011122345788899999999999999999998 89997653
No 257
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.1e-36 Score=306.65 Aligned_cols=264 Identities=22% Similarity=0.303 Sum_probs=200.7
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC------HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS------EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
+|...+.||+|+||.||+|.. .+|+.+|+|.++..... ...+..|+++++.++|+||+++++++.+++..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999986 56899999999765432 24567899999999999999999999999999999
Q ss_pred EeccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
|||++|+|.+++.. +++.....++.||++||.|||++ +|+|+||||+|||++.+ +.++|+|||++.......
T Consensus 81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~-~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASD-GVLKLADFGLARSFGSPN 156 (298)
T ss_pred EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCC-CCEEEccceeeeeccCCC
Confidence 99998899999853 67788899999999999999999 99999999999999998 789999999986543321
Q ss_pred ccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--------
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS-------- 472 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~-------- 472 (549)
.......+++.|+|||.+.+ ..++.++|+|||||++|||++|.+||....... .+..........
T Consensus 157 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 157 -----RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGTPTEENWPGV 230 (298)
T ss_pred -----ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCCCchhhhhhc
Confidence 11223356888999998865 457899999999999999999988876544321 111111110000
Q ss_pred cccccccCCccccc-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 473 GLCERLIDPQLNEE-----YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 473 ~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
.............. ........+.+++..||+.||.+|||+.++++ |+||....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~-----~~~~~~~~ 289 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE-----HPYFSNDP 289 (298)
T ss_pred ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh-----CccccCCC
Confidence 00000000000000 11223467889999999999999999999999 89987643
No 258
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.4e-36 Score=301.90 Aligned_cols=245 Identities=22% Similarity=0.311 Sum_probs=184.5
Q ss_pred eEcccCceEEEEEEec---CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCC
Q 008898 259 LIGQGGNSKVYRTNHV---DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGS 332 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~---~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gs 332 (549)
.||+|+||.||+|... ++..+|+|.++..... ...+.+|+.+++.++||||+++++++.+...++++|||+ +|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 5899999999999753 3467999988755432 246788999999999999999999999989999999999 689
Q ss_pred HHHHHHH--------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 333 LKQYLKQ--------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 333 L~~~l~~--------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
|.+++.. .++.....++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~-~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTAD-LTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCC-CcEEECCccccccccCcce--
Confidence 9999854 23445667899999999999999 99999999999999998 6899999999864322111
Q ss_pred cCccccccccCCccccccccccC-------CCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYG-------KVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~-------~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
........|++.|+|||++.+. .++.++|||||||++|||++ |+.||......+.... .. .+...
T Consensus 156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~----~~--~~~~~ 228 (269)
T cd05087 156 -YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY----TV--REQQL 228 (269)
T ss_pred -eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH----Hh--hcccC
Confidence 1112234678899999988642 35789999999999999996 9999976543321111 11 11112
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
...++.+... ..+.+.+++..|+ .+|++|||+.+|++.|+
T Consensus 229 ~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2222322222 2334666788898 68999999999999875
No 259
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.2e-36 Score=299.41 Aligned_cols=255 Identities=29% Similarity=0.389 Sum_probs=201.3
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+..+.||.|+||.||++.. .++..+|+|++..... ....+.+|+++++.++|+||+++++.+..++.+++++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4688999999999999999986 4688999999875432 345688999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 329 L-NGSLKQYLKQ------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 329 ~-~gsL~~~l~~------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+ +++|.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++++ +.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~-~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGED-GSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCC-CCEEEcccchHHHhccCc
Confidence 9 6789999854 56677888999999999999998 99999999999999998 689999999986554322
Q ss_pred ccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
.... .......|++.|+|||++... .++.++|+|||||++|+|++|+.||........ + ..... . ..
T Consensus 157 ~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~---~~~~~-~------~~ 224 (267)
T cd06610 157 DRTR-KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-L---MLTLQ-N------DP 224 (267)
T ss_pred cccc-cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-H---HHHhc-C------CC
Confidence 1111 122345689999999998877 789999999999999999999999975543221 1 11110 0 01
Q ss_pred CcccccC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 481 PQLNEEY-NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 481 ~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+.+.... .......+.+++..|+..||.+||++.+|++ |+||
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~-----~p~~ 267 (267)
T cd06610 225 PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK-----HKFF 267 (267)
T ss_pred CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh-----CCCC
Confidence 1111110 1233466788999999999999999999998 7886
No 260
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.9e-36 Score=300.39 Aligned_cols=250 Identities=24% Similarity=0.346 Sum_probs=194.1
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---C---HHHHHHHHHHHhcCCCCCeeeEEEEEEc--CCeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---S---EEEVLREVELLSSIKHENIVRIIGYCHS--KEMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~---~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~ 322 (549)
++|...+.||+|+||.||++.. .+|+.+|+|.+..... . .+.+.+|+.+++.++||||+++++++.+ ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4788999999999999999976 5689999999864321 1 2357789999999999999999998865 3568
Q ss_pred EEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
+++|||+ +|+|.+++.. +++.....++.|++.||.|||+. +|+|+||||+||+++.+ +.++|+|||++....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~-~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSV-GNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCC-CCEEECcCccccccc
Confidence 8999999 6799999854 56677888999999999999999 99999999999999988 689999999986543
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.... .........|+..|+|||.+.+..++.++|||||||++|||++|+.||........ . .. .... .
T Consensus 158 ~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~---~~-~~~~-----~ 225 (265)
T cd06652 158 TICL--SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA-I---FK-IATQ-----P 225 (265)
T ss_pred cccc--cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH-H---HH-HhcC-----C
Confidence 2110 11112235689999999999988899999999999999999999999975432211 1 11 1000 0
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..+ ..+......+.++++.|+. +|.+||++++|++ |+|+
T Consensus 226 ~~~----~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~-----~~~~ 264 (265)
T cd06652 226 TNP----VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR-----HTFV 264 (265)
T ss_pred CCC----CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc-----Cccc
Confidence 111 1233444566777888884 9999999999998 7776
No 261
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-36 Score=301.08 Aligned_cols=241 Identities=23% Similarity=0.396 Sum_probs=187.0
Q ss_pred EcccCceEEEEEEec---CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 260 IGQGGNSKVYRTNHV---DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 260 lG~G~fg~Vy~~~~~---~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
||+|+||.||+|.+. ++..+|+|++...... .+.+.+|+.++++++||||+++++++.. +.++++|||+ +|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence 899999999999653 3567999998755322 3568899999999999999999999864 5678999999 6799
Q ss_pred HHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccc
Q 008898 334 KQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKP 409 (549)
Q Consensus 334 ~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 409 (549)
.+++.. +++..++.++.|++.||.|||++ +++||||||+|||++.+ +.++|+|||++........... ..
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~--~~ 155 (257)
T cd05115 82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQ-HYAKISDFGLSKALGADDSYYK--AR 155 (257)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCC-CcEEeccCCccccccCCcccee--cc
Confidence 999853 67888899999999999999999 99999999999999988 6899999999864432211111 11
Q ss_pred cccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCC
Q 008898 410 VNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYN 488 (549)
Q Consensus 410 ~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 488 (549)
....+++.|+|||.+.+..++.++|||||||++|||++ |..||....... . ..... .+. ....+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~---~~~~~-~~~---------~~~~~ 220 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--V---MSFIE-QGK---------RLDCP 220 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--H---HHHHH-CCC---------CCCCC
Confidence 12234678999999988889999999999999999996 999997654321 1 11111 111 01112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 489 REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 489 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..+...+.+++..||..+|.+||++.+|.+.|+.
T Consensus 221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 2334567789999999999999999999998864
No 262
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.1e-36 Score=303.73 Aligned_cols=242 Identities=29% Similarity=0.475 Sum_probs=189.8
Q ss_pred eEcccCceEEEEEEecC-------CcEEEEEEeecCC--cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 259 LIGQGGNSKVYRTNHVD-------GQVAAVKVLKCTN--WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~-------g~~~AvK~l~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
.||+|+||.||+|...+ ++.+|+|.+.... .....+.+|+.+++.++||||+++++++...+..+++|||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999997532 3689999886543 23457889999999999999999999999999999999998
Q ss_pred -CCCHHHHHHH----------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC-----ceEEeeecc
Q 008898 330 -NGSLKQYLKQ----------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH-----HPQLSDFGA 393 (549)
Q Consensus 330 -~gsL~~~l~~----------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~-----~~kL~DFGl 393 (549)
+|+|.+++.. +++...+.++.|++.||.|||+. +++|+||||+||+++.+ + .++|+|||+
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~-~~~~~~~~~l~dfg~ 157 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEK-GYDADRVVKIGDFGL 157 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecC-CCCCCcceEECCccc
Confidence 6899999853 45677888999999999999998 99999999999999987 4 799999999
Q ss_pred ccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcc
Q 008898 394 AMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSS 472 (549)
Q Consensus 394 a~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 472 (549)
+.......... ......++..|+|||.+.++.++.++|||||||++|||++ |..||....... ... .....
T Consensus 158 ~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~~~---~~~~~ 229 (269)
T cd05044 158 ARDIYKSDYYR---KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--VLQ---HVTAG 229 (269)
T ss_pred ccccccccccc---cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--HHH---HHhcC
Confidence 86543321111 1123345788999999999999999999999999999998 999986543221 111 11100
Q ss_pred cccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 473 GLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 473 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. ........+..+.+++.+||..+|.+||++.+|++.|+.
T Consensus 230 ~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 G----------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred C----------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 001122345678899999999999999999999998863
No 263
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.9e-36 Score=302.65 Aligned_cols=256 Identities=22% Similarity=0.299 Sum_probs=194.4
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCC-CCCeeeEEEEEEcC--CeEEEEEe
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIK-HENIVRIIGYCHSK--EMYAIVYN 327 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~--~~~~lv~e 327 (549)
|...+.||+|+||.||++.. .+++.+|+|.++.... ......+|+.++.++. |+|++++++++.++ +.+++++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56678899999999999976 5689999999875432 2234567999999885 99999999999877 89999999
Q ss_pred ccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.|+|.+++.. +++.....++.|++.||.|||+. +++||||+|+||+++. +.++|+|||++.......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~--~~~kl~dfg~~~~~~~~~-- 153 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD--DILKLADFGSCRGIYSKP-- 153 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC--CCeEEEecccccccccCC--
Confidence 999999988854 67888999999999999999999 9999999999999998 589999999986543211
Q ss_pred ccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc----------
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS---------- 472 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~---------- 472 (549)
......+++.|+|||.+.. +.++.++|||||||++|||++|..||....... . ..+.......
T Consensus 154 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 154 ----PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-Q-IAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred ----CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-H-HHHHHHHcCCCCHHHHHhhc
Confidence 1123457899999997654 457899999999999999999999997654321 1 1111111100
Q ss_pred -cccccccCCccc----ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 473 -GLCERLIDPQLN----EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 473 -~~~~~~~d~~l~----~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
........+... ..........+.+++.+||..+|.+||++.++++ |+||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~-----~~~~ 282 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR-----HPYF 282 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh-----CCCC
Confidence 000011111100 0011234577889999999999999999999999 7886
No 264
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5.5e-37 Score=308.67 Aligned_cols=261 Identities=25% Similarity=0.387 Sum_probs=196.5
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
++|+..+.||+|+||.||+|... +++.+|+|++...... .+.+.+|+++++.++||||+++++++..++.+++++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888899999999999999874 5899999998654322 3467889999999999999999999999999999999
Q ss_pred ccCC-CHHHHHH---HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNG-SLKQYLK---QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~g-sL~~~l~---~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.+ +|.++.. .+++.....++.||+.||.|||+. +++|+||+|+||+++++ +.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~-~~~~l~dfg~~~~~~~~~-- 154 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQS-GVVKLCDFGFARTLAAPG-- 154 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCC-CcEEEEeeeeeeeccCCc--
Confidence 9955 5666553 367888999999999999999999 99999999999999998 689999999986543321
Q ss_pred ccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh----------cc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL----------SS 472 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~----------~~ 472 (549)
.......++..|+|||++.+. .++.++|||||||++|||++|++||....... .+........ ..
T Consensus 155 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07846 155 ---EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQK 230 (286)
T ss_pred ---cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCCchhhHHHhcc
Confidence 112234678899999998754 47889999999999999999999997554311 1111000000 00
Q ss_pred c-ccccccCCcccc-----cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 473 G-LCERLIDPQLNE-----EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 473 ~-~~~~~~d~~l~~-----~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
. .......+.... ...+.....+.+++..||..+|.+||++.++++ |+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~-----~~~~ 286 (286)
T cd07846 231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH-----HEFF 286 (286)
T ss_pred chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc-----CCCC
Confidence 0 000001111000 001123466888999999999999999999998 7886
No 265
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.9e-36 Score=309.15 Aligned_cols=264 Identities=22% Similarity=0.311 Sum_probs=197.2
Q ss_pred CCCCCceEcccCceEEEEEEec---CCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC--CeEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV---DGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSK--EMYA 323 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~---~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~ 323 (549)
.|...+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++.++||||+++++++.+. +.++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3778889999999999999873 58899999997632 1235678899999999999999999999887 8899
Q ss_pred EEEeccCCCHHHHHH--------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEec----CCCceEEeee
Q 008898 324 IVYNLLNGSLKQYLK--------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSE----NFHHPQLSDF 391 (549)
Q Consensus 324 lv~e~~~gsL~~~l~--------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~----~~~~~kL~DF 391 (549)
+||||++++|.+++. .++......++.||+.||.|||+. +|+||||||+|||++. + +.+||+||
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~-~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPER-GVVKIGDL 156 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCcc-ceEEECCC
Confidence 999999988888774 245667788999999999999999 9999999999999998 7 68999999
Q ss_pred ccccccccccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccch--------hhH
Q 008898 392 GAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANR--------ESL 462 (549)
Q Consensus 392 Gla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~--------~~l 462 (549)
|++........ .........+|+.|+|||.+.+. .++.++|||||||++|+|++|++||....... ..+
T Consensus 157 g~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
T cd07842 157 GLARLFNAPLK--PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQL 234 (316)
T ss_pred ccccccCCCcc--cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHH
Confidence 99865433211 11222345789999999988764 57899999999999999999999997654322 111
Q ss_pred HHHHHHhhccc-----------ccccccCCcccccCC---------H--HHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 008898 463 VLWARSLLSSG-----------LCERLIDPQLNEEYN---------R--EEIEIVMCAARLCLLHSSSRRPTMKTLLKLF 520 (549)
Q Consensus 463 ~~~~~~~~~~~-----------~~~~~~d~~l~~~~~---------~--~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 520 (549)
..+...+.... ......+......++ . .....+.+++..|+..||.+|||+.++++
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~-- 312 (316)
T cd07842 235 ERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE-- 312 (316)
T ss_pred HHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc--
Confidence 11111110000 000000000000111 0 22345788999999999999999999998
Q ss_pred cCCchhh
Q 008898 521 QEPDYWL 527 (549)
Q Consensus 521 ~~~~~w~ 527 (549)
|+||
T Consensus 313 ---~~~f 316 (316)
T cd07842 313 ---HPYF 316 (316)
T ss_pred ---CCCC
Confidence 7886
No 266
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2e-36 Score=299.56 Aligned_cols=246 Identities=24% Similarity=0.360 Sum_probs=198.4
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|+..+.||+|+||.||++.. .+|+.+|+|.+..... ...++.+|+.+++.++||||+++++++...+..++++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478889999999999999976 5689999999875432 235688999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+ +++|.+++.. +++.....++.|++.||.|||++ +++|+||+|+|||++.+ +.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~-~~~~l~d~~~~~~~~~~~- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKD-GTIKLGDFGIARVLNSTV- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCC-CCEEEeeccceeecCcch-
Confidence 9 6799998853 46777889999999999999998 99999999999999988 689999999986543211
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||....... . ......... +
T Consensus 156 ----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-~----~~~~~~~~~------~- 219 (256)
T cd08218 156 ----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN-L----VLKIIRGSY------P- 219 (256)
T ss_pred ----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH-H----HHHHhcCCC------C-
Confidence 11123468899999999998889999999999999999999999997543221 1 111111110 1
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..+......+.+++..|++.+|.+||++.+|++ |+||
T Consensus 220 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~-----~~~~ 256 (256)
T cd08218 220 ---PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE-----KNFI 256 (256)
T ss_pred ---CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh-----CcCC
Confidence 112233456888999999999999999999999 7885
No 267
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-36 Score=303.76 Aligned_cols=239 Identities=26% Similarity=0.411 Sum_probs=185.7
Q ss_pred eEcccCceEEEEEEec-CCc--EEEEEEeecCC--cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 259 LIGQGGNSKVYRTNHV-DGQ--VAAVKVLKCTN--WSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~-~g~--~~AvK~l~~~~--~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
+||+|+||.||+|... ++. .+++|.++... ...+.+.+|+++++++ +||||+++++++...+.++++|||+ +|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 5899999999999774 444 56888887432 2335688899999999 7999999999999999999999999 78
Q ss_pred CHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeec
Q 008898 332 SLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFG 392 (549)
Q Consensus 332 sL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFG 392 (549)
+|.+++.. +++.+...++.|++.||.|||+. +++||||||+|||++++ +.++|+|||
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~-~~~kl~dfg 157 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN-YVAKIADFG 157 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCC-CeEEECCCC
Confidence 99999853 46777889999999999999998 99999999999999998 689999999
Q ss_pred cccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhc
Q 008898 393 AAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLS 471 (549)
Q Consensus 393 la~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~ 471 (549)
++..... .........++.|+|||++.+..++.++|||||||++|||++ |..||....... . ......
T Consensus 158 l~~~~~~------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~---~~~~~~ 226 (270)
T cd05047 158 LSRGQEV------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--L---YEKLPQ 226 (270)
T ss_pred Cccccch------hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--H---HHHHhC
Confidence 9743211 011112234567999999988889999999999999999997 999996543221 1 111111
Q ss_pred ccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 472 SGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 472 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
+. .... .......+.+++..|+..||.+|||+.++++.|++
T Consensus 227 -~~-----~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 227 -GY-----RLEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred -CC-----CCCC----CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 00 0011 11233457889999999999999999999998854
No 268
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=9.6e-37 Score=306.18 Aligned_cols=256 Identities=25% Similarity=0.345 Sum_probs=198.9
Q ss_pred cCCCCCceEcccCceEEEEEEec-----CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEc--CCeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-----DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHS--KEMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-----~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~ 322 (549)
..|...+.||+|+||.||++.+. ++..+|+|+++..... ...+.+|+++++.+.||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35777889999999999999752 3689999999866553 5678999999999999999999999877 5689
Q ss_pred EEEEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
+++|||+ +|+|.+++.. +++.....++.|++.||.|||++ +++|+||||+||+++.+ +.++|+|||++...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESE-DLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCC-CCEEEccccccccc
Confidence 9999999 6799999954 77888899999999999999999 99999999999999998 68999999998765
Q ss_pred ccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchh----------hHHHHHH
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRE----------SLVLWAR 467 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~----------~l~~~~~ 467 (549)
....... .......++..|+|||.+.+..++.++||||||+++|||++|..|+........ ....+..
T Consensus 160 ~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 160 PEDKDYY--YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccCCcce--eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 4221111 111122455679999999888999999999999999999999999865432110 0111111
Q ss_pred HhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 468 SLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
.+. .......+..++..+.+++.+|+..+|.+|||+.+|++.|+..
T Consensus 238 ~~~----------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 LLK----------EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHH----------cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111 1111111223346788999999999999999999999988753
No 269
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.6e-36 Score=300.46 Aligned_cols=241 Identities=27% Similarity=0.443 Sum_probs=192.1
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++|.+.+.||+|+||.||++.. +++.+|+|.++... ....+.+|+.+++.++|||++++++++..+ .++++|||+ +
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 4588899999999999999875 67889999987543 346788999999999999999999998765 468999998 6
Q ss_pred CCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 GSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
|+|.+++.. +++.....++.|++.||.|||+. +++||||||+||+++.+ +.++|+|||++......
T Consensus 83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~-~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSED-GVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCC-CcEEECCCccceecccc-----
Confidence 799999864 56777888999999999999998 99999999999999998 68999999998543221
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
......+..|+|||.+.++.++.++|+|||||++|||++ |+.||....... . ..... .+.. .+
T Consensus 154 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~---~~~~~-~~~~---~~---- 217 (254)
T cd05083 154 ---VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--V---KECVE-KGYR---ME---- 217 (254)
T ss_pred ---CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--H---HHHHh-CCCC---CC----
Confidence 112234567999999998899999999999999999998 999987654321 1 11111 1110 01
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.....+..+.+++..|++.+|.+||++.++++.|+.
T Consensus 218 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 --PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 112234567889999999999999999999998875
No 270
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.4e-36 Score=302.25 Aligned_cols=252 Identities=26% Similarity=0.369 Sum_probs=201.6
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
-|...+.||+|+||.||+|.. .++..+|+|++..... ....+.+|+.+++.++||||+++++++..++.++++|||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 367788899999999999976 5688999999865432 2246788999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 -NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 -~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+|+|.+++.. +++.....++.|++.|+.|||+. +++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 85 ~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~-~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06641 85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCC-CCEEEeecccceecccch-----
Confidence 6789998864 67788889999999999999998 99999999999999988 689999999986543211
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||....... +........ .+.
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~------~~~---- 220 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-----VLFLIPKNN------PPT---- 220 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-----HHHHHhcCC------CCC----
Confidence 11223468889999999988889999999999999999999999997543211 111111110 111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
........+.+++..|+..+|.+||++.++++ |+|+..+..+
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~-----~~~~~~~~~~ 262 (277)
T cd06641 221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLK-----HKFIVRFAKK 262 (277)
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHHh-----CHHHhhhhhc
Confidence 12233455778889999999999999999999 7898766544
No 271
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.9e-36 Score=303.99 Aligned_cols=250 Identities=24% Similarity=0.330 Sum_probs=202.8
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...+.||+|+||.||++.. .+++.+|+|+++.... ..+.+.+|++++++++||||+++++++..++.++++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 3688899999999999999977 4689999999975432 2345788999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.+++.. ++......++.||++||.|||+. +|+|+||+|+|||++.+ +.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSD-GYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCC-CCEEEeeCCCccccCCC--
Confidence 999 7899999854 67778888999999999999998 99999999999999998 68999999998654321
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.....|++.|+|||.+.+..++.++|+||||+++|+|++|..||....... . +.. .. .+. ..
T Consensus 155 ------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~--~~~-~~-~~~------~~ 216 (290)
T cd05580 155 ------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ--I--YEK-IL-EGK------VR 216 (290)
T ss_pred ------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--H--HHH-Hh-cCC------cc
Confidence 234578999999999988889999999999999999999999997654211 1 111 11 110 11
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~ 534 (549)
+. ......+.+++..||..||.+|| +++++++ |+||.......
T Consensus 217 ~~----~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~-----~~~~~~~~~~~ 264 (290)
T cd05580 217 FP----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN-----HPWFAGIDWIA 264 (290)
T ss_pred CC----ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc-----CcccccCCHHH
Confidence 11 12245677888999999999999 8888887 88887665443
No 272
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.5e-36 Score=298.22 Aligned_cols=245 Identities=25% Similarity=0.349 Sum_probs=194.1
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEE--cCCeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCH--SKEMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~lv~ 326 (549)
+|+..+.||.|+||.||++.+ .+++.+|+|+++..... .+.+..|+.+++.++||||+++++++. .+..++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477888999999999999976 56889999998754433 345778999999999999999999775 345789999
Q ss_pred ecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCC--CCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 327 NLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTC--DPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 327 e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~--~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
||+ +++|.+++.. +++...+.++.||+.||.|||..+ +.+++|+||+|+||+++++ +.++|+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~-~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN-NNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC-CCEEEeccccccc
Confidence 999 6799999854 467788899999999999999322 2299999999999999988 6899999999866
Q ss_pred cccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
...... ......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...... .+ ..... .+.
T Consensus 160 ~~~~~~-----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~---~~~~~-~~~-- 226 (265)
T cd08217 160 LGHDSS-----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--QL---ASKIK-EGK-- 226 (265)
T ss_pred ccCCcc-----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--HH---HHHHh-cCC--
Confidence 543211 122456899999999999888999999999999999999999999765421 11 11111 111
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
....+......+.+++..|+..+|.+||++.+|++
T Consensus 227 -------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 227 -------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred -------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11223344567888999999999999999999998
No 273
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.5e-36 Score=303.64 Aligned_cols=260 Identities=23% Similarity=0.393 Sum_probs=198.7
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
+|+..+.||.|++|.||+|.. .+|..+|+|+++.... ....+.+|+.+++.++||||+++++++...+.++++|||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 478889999999999999987 4689999999976532 2356778999999999999999999999999999999999
Q ss_pred CCCHHHHHHH------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 330 NGSLKQYLKQ------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 330 ~gsL~~~l~~------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
.|+|.+++.. +++.....++.|+++||.|||+. +++|+||||+||+++++ +.++|+|||++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~-~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKR-GELKLADFGLARAFGIPV-- 154 (284)
T ss_pred CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCC-CcEEEeecchhhhhcCCc--
Confidence 9999998853 57788899999999999999999 99999999999999988 689999999986443211
Q ss_pred ccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--cccccccC
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--GLCERLID 480 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~~d 480 (549)
.......+++.|+|||.+.+. .++.++|||||||++|+|++|..||....... .+.......... .....+.+
T Consensus 155 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 155 ---NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred ---cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhc
Confidence 111234578899999988764 46899999999999999999999997654322 111111110000 00000000
Q ss_pred -----Cccc-------ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 481 -----PQLN-------EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 481 -----~~l~-------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.... ..+.+.....+.+++..|++.||.+||++.++++ |+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~-----~~~f 284 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ-----HPWF 284 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc-----CCCC
Confidence 0000 0011123456788999999999999999999998 7886
No 274
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7e-37 Score=316.34 Aligned_cols=270 Identities=23% Similarity=0.308 Sum_probs=201.2
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC-----Ce
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSK-----EM 321 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~ 321 (549)
++++|.+.+.||+|+||.||+|.+ .+|+.||+|.++.... ....+.+|+.+++.++||||+++++++... ..
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 457899999999999999999976 5689999999864322 234578899999999999999999887543 35
Q ss_pred EEEEEeccCCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 322 YAIVYNLLNGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
.++++||+.++|.+++.. +++.....++.|+++||.|||+. +|+||||||+|||++.+ +.++|+|||++.....
T Consensus 83 ~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 83 VYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTN-CDLKICDFGLARIADP 158 (336)
T ss_pred EEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCC-CCEEECcccceeeccc
Confidence 899999999999888864 67788889999999999999999 99999999999999998 6899999999865433
Q ss_pred ccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--cccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--GLCE 476 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~ 476 (549)
.... ........||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||....... ....+...+... ....
T Consensus 159 ~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 159 EHDH--TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLILGVLGTPSQEDLN 235 (336)
T ss_pred cccc--cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHH
Confidence 2111 112234578999999998764 468999999999999999999999996543211 111111100000 0000
Q ss_pred cccCCc-----------cccc---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 477 RLIDPQ-----------LNEE---YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 477 ~~~d~~-----------l~~~---~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
.+.+.. .... ..+.....+.+++..||..+|.+|||+.++++ |+|++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~-----hp~~~~~~ 299 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA-----HPYLEQYH 299 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc-----CccccccC
Confidence 000000 0000 00112356788999999999999999999999 89987664
No 275
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.3e-36 Score=298.79 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=197.1
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|+..+.||+|+||.||++.. .+++.+|+|.+...... ...+.+|+.+++.++||||+++++.+..++.++++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999999976 56889999998754322 34678899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+ +++|.+++.. +++.....++.+++.||.|||++ +++|+||+|+||+++++.+.++|+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~-- 155 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK-- 155 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC--
Confidence 9 6799999854 56777889999999999999999 99999999999999876456899999998654322
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......|++.|+|||.+.+..++.++||||||+++|+|++|..||....... . ....... .. ..
T Consensus 156 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~---~~~~~~~-~~-----~~ 220 (256)
T cd08220 156 ----SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--L---VLKIMSG-TF-----AP 220 (256)
T ss_pred ----ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--H---HHHHHhc-CC-----CC
Confidence 11223568899999999998889999999999999999999999997654321 1 1111111 00 01
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+ .......+.+++..||..+|.+|||+.++++ |+|+
T Consensus 221 ~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~-----~p~~ 256 (256)
T cd08220 221 I----SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA-----QPIC 256 (256)
T ss_pred C----CCCcCHHHHHHHHHHccCChhhCCCHHHHhh-----CCCC
Confidence 1 1123445778889999999999999999998 6664
No 276
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.2e-36 Score=299.50 Aligned_cols=243 Identities=28% Similarity=0.431 Sum_probs=191.3
Q ss_pred ceEcccCceEEEEEEecC--Cc--EEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNHVD--GQ--VAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~--g~--~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
++||+|+||.||++.+.+ ++ .+|+|.+..... ..+.+.+|+.++++++||||+++++++.. ..+++++||+ +
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 358999999999997632 33 689999976554 23568899999999999999999999988 8899999999 6
Q ss_pred CCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 GSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
|+|.+++.. +++...+.++.|+++||.|||++ +++|+||||+||+++.+ +.+||+|||++..........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~- 154 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASD-DKVKIGDFGLMRALPQNEDHY- 154 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecC-CEEEeccccccccccccccce-
Confidence 899999854 56778889999999999999999 99999999999999999 689999999987654322111
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
.......++..|+|||++.+..++.++|||||||++|||++ |..||......+ .. ....... ...
T Consensus 155 -~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~----~~~~~~~--~~~------ 220 (257)
T cd05040 155 -VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-IL----KKIDKEG--ERL------ 220 (257)
T ss_pred -ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HH----HHHHhcC--CcC------
Confidence 11113457889999999998899999999999999999998 999996543322 11 1111110 011
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
..+...+..+.+++..|+..+|.+||++.++++.|.
T Consensus 221 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 -ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011223456888999999999999999999999875
No 277
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.4e-36 Score=303.80 Aligned_cols=258 Identities=22% Similarity=0.348 Sum_probs=196.9
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
|+..+.||.|++|.||+|.+ .+|..+|+|++..... ....+.+|+++++.++|||++++++++.+++..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56778899999999999976 5799999999875432 2356788999999999999999999999999999999999
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+++|.+++.. +++.....++.|+++||.|||+. +++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~-~~~~l~df~~~~~~~~~~--- 153 (283)
T cd07835 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDRE-GALKLADFGLARAFGVPV--- 153 (283)
T ss_pred CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCC-CcEEEeecccccccCCCc---
Confidence 9999999854 56788899999999999999998 99999999999999998 689999999985432211
Q ss_pred cCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc-----------
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS----------- 472 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~----------- 472 (549)
.......+++.|+|||++.+. .++.++|+|||||++|+|++|+.||.......+... ........
T Consensus 154 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 154 --RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR-IFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred --cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHhCCCChHHhhhhhhc
Confidence 111223568899999988764 478999999999999999999999976544222111 11110000
Q ss_pred -cc---cccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 473 -GL---CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 473 -~~---~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+. ......+.. ..........+.+++.+|++.||.+|||++++++ |+||
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~-----~~~~ 283 (283)
T cd07835 231 PDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ-----HPYF 283 (283)
T ss_pred hhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc-----CCCC
Confidence 00 000000000 0111122356778999999999999999999998 7886
No 278
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.7e-36 Score=307.91 Aligned_cols=265 Identities=25% Similarity=0.346 Sum_probs=199.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcC--CeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSK--EMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~l 324 (549)
.++|++.+.||+|+||.||+|.. .+|+.||+|.++..... ...+.+|+.++++++|+||+++++++... +.+++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 46799999999999999999987 56899999999754322 23466899999999999999999998654 57899
Q ss_pred EEeccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+|||+.++|.+++.. +++.....++.||+.||.|||+. +++||||||+||+++.+ +.++|+|||++......
T Consensus 86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~-~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDK-GCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC-CCEEECccceeeecCCc
Confidence 999999999888854 67888899999999999999999 99999999999999988 68999999998654432
Q ss_pred cccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--ccc--
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--GLC-- 475 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~-- 475 (549)
. .......+++.|+|||.+.+ ..++.++|||||||++|||++|++||...... +.+.......... ...
T Consensus 162 ~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07845 162 A-----KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-EQLDLIIQLLGTPNESIWPG 235 (309)
T ss_pred c-----CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCChhhchh
Confidence 1 11122345788999999875 45789999999999999999999999765432 2221111111000 000
Q ss_pred -------ccc-cCCcccccCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 476 -------ERL-IDPQLNEEYN---REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 476 -------~~~-~d~~l~~~~~---~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
... .......... ......+.+++..|+..||++|||+.++++ |+||+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~-----h~~f~~~ 296 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE-----SSYFKEK 296 (309)
T ss_pred hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc-----ChhhccC
Confidence 000 0000000000 012455678999999999999999999998 8999743
No 279
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.2e-36 Score=297.31 Aligned_cols=242 Identities=22% Similarity=0.322 Sum_probs=196.0
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|+..++||.|+||.||.+.. .+++.+++|.+..... ...++.+|++++++++|+||+++++++.+.+.++++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999976 5688999999875432 235688999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+ +|+|.+++.+ +++.+...++.|++.||.|||+. +++|+||+|+||+++.+ +.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~-~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKA-GLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCC-CCEEECcCcceEEcccccc
Confidence 9 6799999954 56778889999999999999999 99999999999999998 6899999999865433221
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
......|++.|+|||.+.+..++.++|+||||+++|||++|..||....... . ...... +.. .
T Consensus 157 -----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-~----~~~~~~-~~~----~-- 219 (256)
T cd08221 157 -----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN-L----VVKIVQ-GNY----T-- 219 (256)
T ss_pred -----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH-H----HHHHHc-CCC----C--
Confidence 2234568999999999988889999999999999999999999997543221 1 111111 110 0
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.........+.+++..|+..+|.+||++.++++
T Consensus 220 ---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 220 ---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred ---CCccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 111223455778889999999999999999998
No 280
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2e-36 Score=304.70 Aligned_cols=261 Identities=25% Similarity=0.377 Sum_probs=199.4
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|+..+.||+|+||.||+|.+. +++.+|+|.++.... ..+.+.+|+++++.++|+||+++++++..++.++++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6888999999999999999874 688999999875432 235688999999999999999999999999999999999
Q ss_pred cCCCHHHHH-HH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYL-KQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l-~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+.+++.+.+ .+ +++.....++.||+.||.|||+. +++|+||+|+||+++++ +.++|+|||++........
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~-~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 82 VERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSES-GVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCC-CCEEEEeeecccccCCCcc--
Confidence 976655444 32 67788899999999999999999 99999999999999998 6899999999866443221
Q ss_pred cCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc-----------c
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS-----------S 472 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~-----------~ 472 (549)
.......++..|+|||++.+. .++.++||||||+++|+|++|++||...... +.+......... .
T Consensus 156 --~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 156 --SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-DQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred --ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHhhhcccC
Confidence 122345688999999999888 7899999999999999999999999765432 111111110000 0
Q ss_pred cccc--cccCCc----ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 473 GLCE--RLIDPQ----LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 473 ~~~~--~~~d~~----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.... ...+.. ....++......+.++++.||..+|.+|||++++++ ++||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~-----~~~f 288 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ-----HPYF 288 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc-----CCCC
Confidence 0000 000000 001122223567889999999999999999999998 7775
No 281
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.2e-36 Score=304.52 Aligned_cols=256 Identities=26% Similarity=0.394 Sum_probs=205.5
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
++|...+.||+|+||.||++.. .+++.+|+|.+..... ..+.+.+|+.+++.++||||+++++++...+..++++||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5788999999999999999975 5688999999865432 3356788999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 -NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 -~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+|+|.+++.+ +++..+..++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~-~~~kL~dfg~~~~~~~~~----- 169 (293)
T cd06647 99 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQ----- 169 (293)
T ss_pred CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCC-CCEEEccCcceecccccc-----
Confidence 6799999864 67788889999999999999999 99999999999999988 689999999886543221
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
.......|++.|+|||.+.++.++.++|+|||||++|+|++|+.||........ +.. ... .+.....
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~----~~~--------~~~~~~~ 236 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYL----IAT--------NGTPELQ 236 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eee----hhc--------CCCCCCC
Confidence 122234688999999999888899999999999999999999999976543211 100 000 0000011
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 487 YNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 487 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
........+.+++..||..+|.+||++.+++. |+||+.....-
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~-----h~~~~~~~~~~ 279 (293)
T cd06647 237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ-----HPFLKIAKPLS 279 (293)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhc-----CHHHhcCcccc
Confidence 12233456788999999999999999999998 89998776443
No 282
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.9e-36 Score=299.47 Aligned_cols=245 Identities=23% Similarity=0.326 Sum_probs=181.1
Q ss_pred eEcccCceEEEEEEecC---CcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCC
Q 008898 259 LIGQGGNSKVYRTNHVD---GQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGS 332 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~---g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gs 332 (549)
.||+|+||.||+|...+ ...+|+|.+...... ...+.+|+.+++.++||||+++++.+...+.++++|||+ +|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 48999999999996533 457888877644322 245788999999999999999999999999999999999 679
Q ss_pred HHHHHHHh--------chhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 333 LKQYLKQL--------KWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 333 L~~~l~~~--------~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
|.+++... .+.....++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTAD-LSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCC-CcEEEeccccccccccchhee
Confidence 99998542 3456678999999999999999 99999999999999998 689999999985432211111
Q ss_pred cCccccccccCCcccccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMY-------GKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~-------~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
......+++.|+|||++.. ..++.++|||||||++|||++ |..||....... .+. ... .. ...
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~---~~~-~~-~~~ 228 (269)
T cd05042 158 ---TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLK---QVV-RE-QDI 228 (269)
T ss_pred ---ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHH---HHh-hc-cCc
Confidence 1123346778999998753 356889999999999999999 778886543321 111 111 11 111
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
.+.++..... ....+.+++..|+ .||.+|||+++|+++|.
T Consensus 229 ~~~~~~~~~~----~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 229 KLPKPQLDLK----YSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCCCccccc----CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 2223322222 3344555667788 59999999999999873
No 283
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-36 Score=311.93 Aligned_cols=250 Identities=25% Similarity=0.393 Sum_probs=193.8
Q ss_pred cCCCCCceEcccCceEEEEEEecC--------CcEEEEEEeecCCc--CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCC
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVD--------GQVAAVKVLKCTNW--SEEEVLREVELLSSI-KHENIVRIIGYCHSKE 320 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~--------g~~~AvK~l~~~~~--~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 320 (549)
.+|.+.+.||+|+||.||++.... +..+|+|.++.... ...++.+|+.+++++ +||||++++++|..++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468889999999999999996421 23689998875432 235688999999999 7999999999999989
Q ss_pred eEEEEEecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEe
Q 008898 321 MYAIVYNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLS 380 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~ 380 (549)
..++++||+ +|+|.+++.+ +.+.....++.||+.||.|||++ +|+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 999999999 6799999853 45667788999999999999999 999999999999999
Q ss_pred cCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccch
Q 008898 381 ENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANR 459 (549)
Q Consensus 381 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~ 459 (549)
.+ +.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 169 ~~-~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 169 ED-NVMKIADFGLARDVHNIDYY---KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred CC-CcEEECCcccceeccccccc---ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 88 68999999998654332111 11122334568999999999999999999999999999998 888886543221
Q ss_pred hhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 460 ESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 460 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
+...+... .. . ..+......+.+++..|+..+|.+||++.++++.|+..
T Consensus 245 -----~~~~~~~~-~~-----~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 245 -----LFKLLKEG-HR-----M----DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred -----HHHHHHcC-CC-----C----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 11111111 00 0 11122345677889999999999999999999988543
No 284
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.1e-36 Score=305.73 Aligned_cols=266 Identities=24% Similarity=0.368 Sum_probs=196.4
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCC------
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKE------ 320 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------ 320 (549)
-++|...+.||+|+||.||++.. .+++.+|+|.+...... ...+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 35799999999999999999987 56899999998644322 234678999999999999999999986543
Q ss_pred --eEEEEEeccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 321 --MYAIVYNLLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 321 --~~~lv~e~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
.++++|||+.++|.+++.. +++.+...++.||++||.|||++ +++|+||||+||+++.+ +.++|+|||++
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~-~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKD-GILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCC-CcEEECcCCCc
Confidence 4699999999999888853 67888899999999999999999 99999999999999988 68999999998
Q ss_pred cccccccccccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh--c
Q 008898 395 MVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL--S 471 (549)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~--~ 471 (549)
.......... ........++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... ..+........ .
T Consensus 167 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-~~~~~~~~~~~~~~ 244 (310)
T cd07865 167 RAFSLSKNSK-PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-HQLTLISQLCGSIT 244 (310)
T ss_pred ccccCCcccC-CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 7554322111 11223446788999999887654 788999999999999999999999765432 11111111000 0
Q ss_pred ccccccc-----cC-CcccccCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 472 SGLCERL-----ID-PQLNEEYNR---------EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 472 ~~~~~~~-----~d-~~l~~~~~~---------~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
....... .+ -........ .....+.+++..||..||.+|||+.++++ |+||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~-----h~~f 310 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN-----HDFF 310 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc-----CCCC
Confidence 0000000 00 000000000 01235678999999999999999999998 8886
No 285
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.3e-36 Score=297.96 Aligned_cols=252 Identities=26% Similarity=0.396 Sum_probs=205.4
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++|+..+.||+|+||.||++... +++.+++|++..... ....+.+|+.+++.++|+||+++++++...+.+++++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999874 599999999876543 346788999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+ +++|.+++.. ++......++.|+++||.|||+ . +++|+||+|+||+++.+ +.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~-~~~~l~df~~~~~~~~~~~- 155 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSK-GEVKIADFGISKVLENTLD- 155 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCC-CCEEEccCccceecccCCC-
Confidence 9 5899999965 7778889999999999999999 8 99999999999999998 6899999999865433211
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCccc-chhhHHHHHHHhhcccccccccCCc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKA-NRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~-~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
......++..|+|||.+.+..++.++|+||||+++|+|++|..||..... ....+. ...... ..+.
T Consensus 156 ----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~---~~~~~~------~~~~ 222 (264)
T cd06623 156 ----QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELM---QAICDG------PPPS 222 (264)
T ss_pred ----cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHH---HHHhcC------CCCC
Confidence 11245688999999999988899999999999999999999999977642 111111 111110 1111
Q ss_pred ccccCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 483 LNEEYNRE-EIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 483 l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
.+.. .+..+.+++..|+..+|.+||++.++++ ++|++..
T Consensus 223 ----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~-----~~~~~~~ 262 (264)
T cd06623 223 ----LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ-----HPFIKKA 262 (264)
T ss_pred ----CCcccCCHHHHHHHHHHccCChhhCCCHHHHHh-----CHHHHhc
Confidence 1222 4567888899999999999999999999 8998654
No 286
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.7e-36 Score=297.39 Aligned_cols=246 Identities=27% Similarity=0.346 Sum_probs=196.5
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc------CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW------SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
+|+..+.||+|+||.||+|... ++..+++|.+..... ..+.+.+|+.+++.++|+||+++++++..++.++++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999874 789999999865431 224678899999999999999999999999999999
Q ss_pred Eecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+||+ +++|.+++.. +++.....++.||+.||.|||+. +|+|+||+|+||+++.+ +.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~-~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTN-GVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC-CCEEEccCccceeccccc
Confidence 9999 5689999865 56777888999999999999999 99999999999999988 689999999986543221
Q ss_pred ccccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
......|++.|+|||.+.... ++.++|+|||||++|+|++|+.||....... ....+ ......
T Consensus 157 ------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-~~~~~----~~~~~~----- 220 (258)
T cd06632 157 ------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AVFKI----GRSKEL----- 220 (258)
T ss_pred ------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-HHHHH----HhcccC-----
Confidence 123456899999999988776 8999999999999999999999997654211 11111 110110
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+ ..+......+.+++.+||..+|.+||++.++++ |+|+
T Consensus 221 ~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~-----~~~~ 258 (258)
T cd06632 221 P----PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE-----HPFV 258 (258)
T ss_pred C----CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc-----CCCC
Confidence 1 112223455677889999999999999999998 6664
No 287
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4.8e-36 Score=300.63 Aligned_cols=251 Identities=29% Similarity=0.448 Sum_probs=199.2
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC--cCHHHHHHHHHHHhcCC---CCCeeeEEEEEEcCCeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN--WSEEEVLREVELLSSIK---HENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~--~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lv~ 326 (549)
.|+..+.||+|+||.||+|.+ .+++.+|+|.++... ....++.+|+.+++.++ |||++++++++..+..++++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467778899999999999986 578999999987543 23356788999999996 999999999999999999999
Q ss_pred ecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 327 e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
||+ +++|.++++. +++.....++.|+++||.|||+. +|+|+||+|+||+++.+ +.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06917 82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNT-GNVKLCDFGVAALLNQNS-- 155 (277)
T ss_pred ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCC-CCEEEccCCceeecCCCc--
Confidence 999 6789998855 56777889999999999999999 99999999999999998 789999999986654322
Q ss_pred ccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......|++.|+|||.+.++ .++.++|+|||||++|+|++|..||........ .... .....+.
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-----~~~~------~~~~~~~ 221 (277)
T cd06917 156 ---SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-----MMLI------PKSKPPR 221 (277)
T ss_pred ---cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-----hhcc------ccCCCCC
Confidence 122345689999999988754 468999999999999999999999975433211 0000 0111111
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
+... .....+.+++..||..||.+||++.++++ ++|++...
T Consensus 222 ~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~-----~~~~~~~~ 262 (277)
T cd06917 222 LEDN---GYSKLLREFVAACLDEEPKERLSAEELLK-----SKWIKAHS 262 (277)
T ss_pred CCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhh-----ChHhhccc
Confidence 1111 13456788889999999999999999998 89995543
No 288
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-36 Score=308.72 Aligned_cols=255 Identities=25% Similarity=0.392 Sum_probs=200.2
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
|.....||+|+||.||++.. .++..+|||.+...... .+.+.+|+.+++.++|+||+++++.+..++.++++|||+ +
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 33345699999999999976 56889999998654322 346789999999999999999999999999999999999 5
Q ss_pred CCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcc
Q 008898 331 GSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVK 408 (549)
Q Consensus 331 gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~ 408 (549)
++|.+++.. +++.+...++.||+.||.|||+. +|+||||||+||+++.+ +.++|+|||++...... ...
T Consensus 104 ~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~-~~~kL~dfg~~~~~~~~-----~~~ 174 (292)
T cd06658 104 GALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSD-GRIKLSDFGFCAQVSKE-----VPK 174 (292)
T ss_pred CcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCC-CCEEEccCcchhhcccc-----ccc
Confidence 688888743 67788899999999999999999 99999999999999998 68999999998543221 111
Q ss_pred ccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCC
Q 008898 409 PVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYN 488 (549)
Q Consensus 409 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 488 (549)
.....|++.|+|||.+.+..++.++|+|||||++|||++|..||........ +.... ....+.... .
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~----------~~~~~~~~~--~ 241 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-MRRIR----------DNLPPRVKD--S 241 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH----------hcCCCcccc--c
Confidence 2345689999999999888899999999999999999999999975433211 11100 011111111 1
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHH
Q 008898 489 REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 489 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
......+.+++..|+..||.+|||+.++++ |+||+.......
T Consensus 242 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~-----~~~~~~~~~~~~ 283 (292)
T cd06658 242 HKVSSVLRGFLDLMLVREPSQRATAQELLQ-----HPFLKLAGPPSC 283 (292)
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh-----ChhhhccCCccc
Confidence 122345777889999999999999999998 899987655443
No 289
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=6.2e-36 Score=296.19 Aligned_cols=232 Identities=24% Similarity=0.418 Sum_probs=183.3
Q ss_pred eEcccCceEEEEEEecC-C----------cEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 259 LIGQGGNSKVYRTNHVD-G----------QVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~-g----------~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.||+|+||.||+|.+.+ + ..+++|++.........+.+|+.+++.++||||+++++++.. ...+++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e 80 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEE 80 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEE
Confidence 58999999999998743 3 257888877655445678899999999999999999999988 77889999
Q ss_pred cc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC-------ceEEeeecccc
Q 008898 328 LL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH-------HPQLSDFGAAM 395 (549)
Q Consensus 328 ~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~-------~~kL~DFGla~ 395 (549)
|+ +|+|.+++.. +++..+..++.||+.||.|||+. +|+||||||+|||++.+ + .++|+|||++.
T Consensus 81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~-~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARY-GLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecC-ccccCCceeEEeCCCCccc
Confidence 99 7899999863 56778888999999999999998 99999999999999987 4 59999999986
Q ss_pred ccccccccccCccccccccCCccccccccccC--CCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcc
Q 008898 396 VHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG--KVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSS 472 (549)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 472 (549)
.... .....++..|+|||++.+. .++.++|||||||++|||++ |..||...... +.. .+.. ..
T Consensus 157 ~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~-~~~~---~~ 222 (259)
T cd05037 157 TVLS---------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-EKE-RFYQ---DQ 222 (259)
T ss_pred cccc---------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-hHH-HHHh---cC
Confidence 5332 1133567789999998876 78999999999999999999 57777655321 111 1111 00
Q ss_pred cccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 473 GLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 473 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
.....+ ....+.+++..||..+|.+|||+.++++.|+
T Consensus 223 ---~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 ---HRLPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ---CCCCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000000 0156788999999999999999999999774
No 290
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-37 Score=310.01 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=206.2
Q ss_pred CceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEeccCCC
Q 008898 257 KMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLLNGS 332 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~gs 332 (549)
.++||.|-||.||-|.+ ++|+.||||++.+-.. .+..+..|+.||+.++||.||.+...|++.+..++|||.+.|+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 46799999999999987 6899999999976443 3356889999999999999999999999999999999999999
Q ss_pred HHHHHH-----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEe--cCCCceEEeeecccccccccccccc
Q 008898 333 LKQYLK-----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLS--ENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 333 L~~~l~-----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~--~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
+.+.+- ++++.....+..||+.||.|||.+ +|+|+||||+|||+. ++|.++||||||+|++...
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE------ 719 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE------ 719 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch------
Confidence 877762 255555567889999999999999 999999999999996 4556899999999988554
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
......++|||.|+|||++...+|+...|+||.|||+|--|+|..||..+.+-.+++. .+. -+.-+....
T Consensus 720 ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQ-NAa---------FMyPp~PW~ 789 (888)
T KOG4236|consen 720 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQ-NAA---------FMYPPNPWS 789 (888)
T ss_pred hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhh-ccc---------cccCCCchh
Confidence 3344578999999999999999999999999999999999999999987654322221 111 111222223
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHHHHh
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEELLN 538 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~~~~ 538 (549)
+++ ....++|...|+..-++|.|....+. |+|+..++.=-++++
T Consensus 790 eis----~~AidlIn~LLqVkm~kRysvdk~ls-----h~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 790 EIS----PEAIDLINNLLQVKMRKRYSVDKSLS-----HPWLQDYQTWLDLRE 833 (888)
T ss_pred hcC----HHHHHHHHHHHHHHHHHhcchHhhcc-----chhhhcchHHHHHHH
Confidence 333 34566778889999999999999998 899988887666665
No 291
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.6e-36 Score=313.71 Aligned_cols=272 Identities=22% Similarity=0.325 Sum_probs=202.3
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcC--CeE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSI-KHENIVRIIGYCHSK--EMY 322 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~--~~~ 322 (549)
+.++|...+.||+|+||.||+|.. .+|+.+|+|.+.... .....+.+|+.+++++ +||||++++++|... ..+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 456788999999999999999987 468899999885432 2234577899999999 999999999988643 468
Q ss_pred EEEEeccCCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 323 AIVYNLLNGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 323 ~lv~e~~~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+++|||+.++|.+++.. +.+.....++.||+.||.|||+. +|+|+||||+||+++.+ +.++|+|||++......
T Consensus 85 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~-~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSD-CRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCC-CcEEEeeccchhccccc
Confidence 99999999999999864 67777888999999999999999 99999999999999999 68999999998765433
Q ss_pred cccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh--c------
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL--S------ 471 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~--~------ 471 (549)
.............||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ......... .
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07852 161 EENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDIES 239 (337)
T ss_pred cccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHH
Confidence 22111122334578999999998765 4578999999999999999999999975443211 100000000 0
Q ss_pred --ccccccccC----Ccc--cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 472 --SGLCERLID----PQL--NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 472 --~~~~~~~~d----~~l--~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
......+++ ... ...........+.+++.+|++.||.+|||+.++++ |+|+.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~-----~~~~~~~~ 302 (337)
T cd07852 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE-----HPYVAQFH 302 (337)
T ss_pred HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh-----Chhhhhhc
Confidence 000000000 000 00011113466888999999999999999999998 78887753
No 292
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=305.74 Aligned_cols=270 Identities=22% Similarity=0.330 Sum_probs=213.4
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv 325 (549)
.+|....+||+|+||+|.++.. .+.+.||||+++++..- .+-.+.|-.+|... +-|+++++..+|++-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 4688999999999999999976 45789999999876432 23356788888766 478999999999999999999
Q ss_pred Eecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
|||+ +|+|.-.+++ +.+..+..+|..|+-||-+||++ |||+||||.+|||++.+ |++||+|||+++ .
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~e-GHiKi~DFGmcK-----E 499 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSE-GHIKIADFGMCK-----E 499 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccC-CceEeeeccccc-----c
Confidence 9999 6788888876 77788889999999999999999 99999999999999999 899999999994 3
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.......+.++||||.|+|||++.+.+|+.++|+|||||+|||||.|++||+..+++ +.+.. +++.
T Consensus 500 ni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~-elF~a-------------I~eh 565 (683)
T KOG0696|consen 500 NIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-ELFQA-------------IMEH 565 (683)
T ss_pred cccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHH-------------HHHc
Confidence 355666778999999999999999999999999999999999999999999887643 22211 1111
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHH-HHHhcCCchhhhhhhHHHHHHhhccCCCCC
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTL-LKLFQEPDYWLKMKREKEELLNERRSNGPA 546 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev-l~~L~~~~~w~~~~~~~~~~~~~~~~~~~~ 546 (549)
. -.|+.......+.+++..+...|.+|....-- -+-++.+..+..-.++..|-.+-.++++|.
T Consensus 566 n--vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk 629 (683)
T KOG0696|consen 566 N--VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPK 629 (683)
T ss_pred c--CcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCc
Confidence 1 23444555566777788999999999643211 122223334445566777777777777764
No 293
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.4e-36 Score=315.07 Aligned_cols=267 Identities=20% Similarity=0.312 Sum_probs=200.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC------C
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSK------E 320 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~ 320 (549)
.++|...+.||+|+||.||+|.. .+|+.+|+|.++.... ....+.+|+.+++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999986 5689999999865321 234578999999999999999999988654 3
Q ss_pred eEEEEEeccCCCHHHHHH-HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 321 MYAIVYNLLNGSLKQYLK-QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 321 ~~~lv~e~~~gsL~~~l~-~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
.++++++|+.++|..++. .+++.....++.|++.||.|||+. +|+||||||+||+++.+ +.++|+|||++.....
T Consensus 94 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~-~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 94 DFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNED-CELKILDFGLARHADA 169 (342)
T ss_pred eEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC-CCEEEeeCCCCcCCCC
Confidence 569999999888888765 578888899999999999999999 99999999999999998 6899999999854321
Q ss_pred ccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHh---------
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSL--------- 469 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~--------- 469 (549)
......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||............+...-
T Consensus 170 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 170 --------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred --------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 1224467889999999876 4689999999999999999999999986543221111110000
Q ss_pred hcccccccccC--Cccc-ccC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 470 LSSGLCERLID--PQLN-EEY---NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 470 ~~~~~~~~~~d--~~l~-~~~---~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
........... +... ... .+.....+.+++..||..||.+||++.+++. |+||......+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~-----h~~f~~~~~~~ 307 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE-----HPYFDSFRDAD 307 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc-----Ccchhhccccc
Confidence 00000000000 0000 000 0112345778999999999999999999998 89997765433
No 294
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.1e-36 Score=298.42 Aligned_cols=245 Identities=23% Similarity=0.336 Sum_probs=183.6
Q ss_pred ceEcccCceEEEEEEec----CCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEE-cCCeEEEEEecc-
Q 008898 258 MLIGQGGNSKVYRTNHV----DGQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCH-SKEMYAIVYNLL- 329 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~----~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~~lv~e~~- 329 (549)
+.||+|+||.||+|... ++..+|+|.+..... ..+.+.+|+.+++.++||||+++++++. .++..+++|+|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999753 245799998854322 2356788999999999999999999875 455688999998
Q ss_pred CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 ~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
+|+|.+++.. ..+.....++.|++.||.|||+. +++||||||+|||++++ +.+||+|||++......... .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~-~~~kl~dfg~~~~~~~~~~~-~ 155 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDES-FTVKVADFGLARDIYDKEYY-S 155 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCC-CcEEECCccccccccCCcce-e
Confidence 6899999864 35566778899999999999999 99999999999999998 68999999998643321110 1
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITG-KEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
........+++.|+|||.+.+..++.++|||||||++|||++| .+||..... .+ + ........ .+..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~-~---~~~~~~~~------~~~~- 223 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS-FD-I---TVYLLQGR------RLLQ- 223 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH-HH-H---HHHHhcCC------CCCC-
Confidence 1111233567789999999888999999999999999999995 555544322 11 1 11111110 0111
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
+...+..+.+++..||..+|.+||++.+|++.|+.
T Consensus 224 ---~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 224 ---PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred ---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 11223568889999999999999999999998764
No 295
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.2e-36 Score=300.73 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=195.7
Q ss_pred cCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYA 323 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 323 (549)
++|+....||+|+||.||++... +.+.+++|.+...... ...+.+|+.++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57889999999999999999753 2468999988654332 356889999999999999999999999989999
Q ss_pred EEEecc-CCCHHHHHHH------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEee
Q 008898 324 IVYNLL-NGSLKQYLKQ------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSD 390 (549)
Q Consensus 324 lv~e~~-~gsL~~~l~~------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~D 390 (549)
++|||+ +|+|.+++.. +++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.++|+|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~-~~~~l~~ 160 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQ-REVKVSL 160 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCC-CcEEEcc
Confidence 999999 5899999853 56788899999999999999999 99999999999999998 6899999
Q ss_pred eccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHh
Q 008898 391 FGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSL 469 (549)
Q Consensus 391 FGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~ 469 (549)
||++....... ........+++.|+|||.+.+..++.++|||||||++|+|++ |..||...... ......
T Consensus 161 ~~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~--- 231 (275)
T cd05046 161 LSLSKDVYNSE----YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRL--- 231 (275)
T ss_pred cccccccCccc----ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHH---
Confidence 99986433211 112223456778999999988889999999999999999999 78888643321 111111
Q ss_pred hcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 470 LSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 470 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
..+... + ......+..+.+++.+||..+|.+||++.++++.|.
T Consensus 232 -~~~~~~-~-------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 -QAGKLE-L-------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -HcCCcC-C-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 001100 0 011223457888999999999999999999999875
No 296
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-35 Score=301.02 Aligned_cols=259 Identities=20% Similarity=0.208 Sum_probs=185.1
Q ss_pred hcCCCCCceEcccCceEEEEEEecC----CcEEEEEEeecCCcCH--H----------HHHHHHHHHhcCCCCCeeeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVD----GQVAAVKVLKCTNWSE--E----------EVLREVELLSSIKHENIVRIIG 314 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~----g~~~AvK~l~~~~~~~--~----------~~~~E~~il~~l~h~nIv~l~~ 314 (549)
.++|.+.++||+|+||.||+|...+ +..+|+|+........ + ....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3579999999999999999998643 4567777654332211 1 1123344566778999999998
Q ss_pred EEEcCC----eEEEEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceE
Q 008898 315 YCHSKE----MYAIVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQ 387 (549)
Q Consensus 315 ~~~~~~----~~~lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~k 387 (549)
++.... ..+++++++..++.+.++. .++.....++.|++.||.|||+. +|+||||||+|||++.+ +.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~-~~~~ 166 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN-NRGY 166 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC-CcEE
Confidence 765443 3467777777777766654 45667788999999999999999 99999999999999988 6899
Q ss_pred Eeeeccccccccccccc--cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHH
Q 008898 388 LSDFGAAMVHHQSHQVS--ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLW 465 (549)
Q Consensus 388 L~DFGla~~~~~~~~~~--~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~ 465 (549)
|+|||+|.......... .........||+.|+|||++.+..++.++|||||||++|||++|..||.............
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~ 246 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA 246 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence 99999997653221110 1112233579999999999999999999999999999999999999998664322211100
Q ss_pred HHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 466 ARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 466 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
... ....+...... ....+..+.+++..|+..+|++||++.+|++.|+
T Consensus 247 ~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 247 KCD-----FIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHH-----HHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 000 01111111111 1122466888999999999999999999999764
No 297
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=8e-36 Score=300.78 Aligned_cols=259 Identities=28% Similarity=0.423 Sum_probs=207.8
Q ss_pred hhcCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
.++.|...+.||+|+||.||++.+. ++..+++|+++........+.+|+++++.++|+|++++++++...+..++++||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 4567888899999999999999874 688999999986654456788999999999999999999999999999999999
Q ss_pred cC-CCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 329 LN-GSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 329 ~~-gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
+. ++|.+++.. +++..+..++.|++.||.|||+. +++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~-- 170 (286)
T cd06614 97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKD-GSVKLADFGFAAQLTKEK-- 170 (286)
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCC-CCEEECccchhhhhccch--
Confidence 95 799999954 57778889999999999999998 99999999999999988 689999999875443211
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
.......+++.|+|||.+.+..++.++|+|||||++|+|++|..||........ ... ..... ... .
T Consensus 171 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-~~~----~~~~~-~~~-----~ 236 (286)
T cd06614 171 ---SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-LFL----ITTKG-IPP-----L 236 (286)
T ss_pred ---hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-HHH----HHhcC-CCC-----C
Confidence 112234578899999999888899999999999999999999999975543221 111 11100 000 0
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHH
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
. ........+.+++..|++.+|.+||++.++++ ++|++.....-.
T Consensus 237 ~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~-----~~~~~~~~~~~~ 281 (286)
T cd06614 237 K--NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ-----HPFLKKACPKEE 281 (286)
T ss_pred c--chhhCCHHHHHHHHHHhccChhhCcCHHHHhh-----ChHhhccCchHh
Confidence 0 11123456888999999999999999999999 899988554433
No 298
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=9.2e-36 Score=295.83 Aligned_cols=253 Identities=27% Similarity=0.400 Sum_probs=199.6
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|...+.||+|+||.||++.. .+++.+++|.++..... ...+..|+.+++.++|+||+++++++...+.+++++||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 477888999999999999976 46899999999866543 45688999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+ +++|.+++.. +++.....++.+++.||.|||+. +|+|+||+|+||+++++ +.++|+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~-~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHN-GVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC-CCEEEcccccccccCCCCCcc
Confidence 9 6789999854 67778888999999999999999 99999999999999998 689999999986654322111
Q ss_pred cCccccccccCCccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGK---VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~---~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
. .......+++.|+|||++.+.. ++.++||||||+++|+|++|+.||.......... . . .. .+ ..+
T Consensus 157 ~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~-~-~--~~-~~-----~~~ 225 (264)
T cd06626 157 G-EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM-F-H--VG-AG-----HKP 225 (264)
T ss_pred c-ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH-H-H--Hh-cC-----CCC
Confidence 1 1022356889999999998766 8899999999999999999999997543221111 0 0 00 01 111
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.++.. ......+.+++..|++.+|.+|||+.+++. |+|+
T Consensus 226 ~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~-----~~~~ 264 (264)
T cd06626 226 PIPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQ-----HPFV 264 (264)
T ss_pred CCCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhc-----CCCC
Confidence 11111 112455678889999999999999999998 7774
No 299
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.2e-36 Score=298.58 Aligned_cols=245 Identities=25% Similarity=0.337 Sum_probs=197.2
Q ss_pred EcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 260 IGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 260 lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
||.|+||.||++.. .+++.+|+|++..... ..+.+.+|+.+++.++||||+++++++.+++.+++++||+ +|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999987 4589999999975432 2356888999999999999999999999999999999998 6899
Q ss_pred HHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcccc
Q 008898 334 KQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPV 410 (549)
Q Consensus 334 ~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 410 (549)
.+++.+ ++......++.||+.||.|||+. +++|+||+|+||+++.+ +.++|+|||++....... ...
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~-~~~~l~df~~~~~~~~~~------~~~ 150 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSN-GYVKLVDFGFAKKLKSGQ------KTW 150 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCC-CCEEEeeCCcccccCccc------ccc
Confidence 999864 56778888999999999999998 99999999999999998 689999999986543321 122
Q ss_pred ccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHH
Q 008898 411 NVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNRE 490 (549)
Q Consensus 411 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 490 (549)
...|++.|+|||.+.+..++.++|+||||+++|+|++|..||.....+.... ...... ......++..
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~ 218 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEI---YNDILK---------GNGKLEFPNY 218 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHH---HHHHhc---------cCCCCCCCcc
Confidence 4468899999999988889999999999999999999999997665322111 111110 0001112222
Q ss_pred HHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcCCchhhhhhh
Q 008898 491 EIEIVMCAARLCLLHSSSRRPT-----MKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 491 ~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~L~~~~~w~~~~~ 531 (549)
....+.+++..||..+|.+||+ +.|+++ |+||+...
T Consensus 219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~-----~~~~~~~~ 259 (262)
T cd05572 219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK-----HKWFNGFD 259 (262)
T ss_pred cCHHHHHHHHHHccCChhhCcCCcccCHHHHhc-----ChhhhCCC
Confidence 2567888999999999999999 899998 89998653
No 300
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7.6e-36 Score=302.77 Aligned_cols=257 Identities=28% Similarity=0.406 Sum_probs=198.8
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEEe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS--EEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e 327 (549)
++|...+.||+|+||.||++.+. +++.+|||.++..... ...+.+|+.++..+. ||||+++++++.++..++++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 57888999999999999999885 4899999999765322 345667887776665 9999999999999999999999
Q ss_pred ccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 328 LLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 328 ~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
|+.++|.+++.. +++..+..++.|++.||.|||+ . +|+||||+|+||+++.+ +.++|+|||++.......
T Consensus 95 ~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~-~~~kL~dfg~~~~~~~~~- 169 (296)
T cd06618 95 LMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDAS-GNVKLCDFGISGRLVDSK- 169 (296)
T ss_pred ccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCC-CCEEECccccchhccCCC-
Confidence 998888887754 6777888999999999999997 5 89999999999999988 689999999985433211
Q ss_pred cccCccccccccCCccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGK----VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~----~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
......+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||.......+.+.. ..... .
T Consensus 170 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~-~--- 236 (296)
T cd06618 170 -----AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTK----ILQEE-P--- 236 (296)
T ss_pred -----cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHH----HhcCC-C---
Confidence 112335788999999987553 789999999999999999999999654332222211 11111 0
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHH
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
+.... .......+.+++.+||..||.+||++.++++ |+|+.......+
T Consensus 237 --~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~-----~~~~~~~~~~~~ 284 (296)
T cd06618 237 --PSLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ-----HPFIRRYETAEV 284 (296)
T ss_pred --CCCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhc-----ChhhhccchhHH
Confidence 00100 1123456788899999999999999999998 799877555444
No 301
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3e-36 Score=298.06 Aligned_cols=247 Identities=27% Similarity=0.363 Sum_probs=197.9
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|...+.||+|+||.||++.. .+|..+|+|.+.... ...+.+.+|+.+++.++|+||+++++.+..++..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 477889999999999999977 468899999987542 2335677999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 329 L-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
+ +++|.+++.. +++.....++.|+++||.|||+. +++|+||||+||+++++...++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 9 6799998854 56788889999999999999999 999999999999999874457999999986543321
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......|++.|+|||++.+..++.++|+|||||++|||++|..||........ ....... . ..+
T Consensus 157 ----~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~-~----~~~- 221 (257)
T cd08225 157 ----ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL-----VLKICQG-Y----FAP- 221 (257)
T ss_pred ----ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH-----HHHHhcc-c----CCC-
Confidence 111234689999999999888899999999999999999999999975543221 1111111 1 111
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
........+.+++.+|+..+|++|||+.++++ |+||
T Consensus 222 ----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~-----~~~~ 257 (257)
T cd08225 222 ----ISPNFSRDLRSLISQLFKVSPRDRPSITSILK-----RPFL 257 (257)
T ss_pred ----CCCCCCHHHHHHHHHHhccChhhCcCHHHHhh-----CCCC
Confidence 11223346888889999999999999999998 7775
No 302
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=320.10 Aligned_cols=245 Identities=25% Similarity=0.421 Sum_probs=198.9
Q ss_pred eEcccCceEEEEEEec-CCcEEEEEEeecCC-cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHHH
Q 008898 259 LIGQGGNSKVYRTNHV-DGQVAAVKVLKCTN-WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLKQ 335 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~~ 335 (549)
+||+|.||+||-|+.. +...+|||.+...+ ...+.+.+|+..-++|+|.|||+++|.+.+++.+-|.||-+ +|+|..
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 7999999999999874 46688999986443 23355889999999999999999999999999999999998 889999
Q ss_pred HHHH----h--chhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccc
Q 008898 336 YLKQ----L--KWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKP 409 (549)
Q Consensus 336 ~l~~----~--~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 409 (549)
.|+. + .+..+-.+-.||++||.|||.+ .|+|||||-+|+|++.--|.+||+|||.++.... .+..+
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-----inP~T 733 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-----INPCT 733 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc-----CCccc
Confidence 9965 3 4456677889999999999999 9999999999999987778999999999865433 33455
Q ss_pred cccccCCccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 410 VNVVGTFGYLAPEYMMYG--KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 410 ~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.++.||..|||||++..| +|+.++|||||||.+.||.||++||......+... ++-|.. -..| ++
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM-------FkVGmy--KvHP----~i 800 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM-------FKVGMY--KVHP----PI 800 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh-------hhhcce--ecCC----CC
Confidence 688999999999999866 48999999999999999999999998766544321 112211 1233 33
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
+.+.......+|.+|+.+||.+||+++++++ ++|+..
T Consensus 801 Peelsaeak~FilrcFepd~~~R~sA~~LL~-----DpFlq~ 837 (1226)
T KOG4279|consen 801 PEELSAEAKNFILRCFEPDPCDRPSAKDLLQ-----DPFLQH 837 (1226)
T ss_pred cHHHHHHHHHHHHHHcCCCcccCccHHHhcc-----Cccccc
Confidence 4555666667778999999999999999998 555543
No 303
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.3e-35 Score=305.85 Aligned_cols=266 Identities=23% Similarity=0.337 Sum_probs=194.8
Q ss_pred eEccc--CceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CC
Q 008898 259 LIGQG--GNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NG 331 (549)
Q Consensus 259 ~lG~G--~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~g 331 (549)
.||+| +||.||++.+ .+|+.||+|++...... .+.+.+|+.+++.++||||++++++|..++.+++++||+ +|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999987 57999999998755433 245778999999999999999999999999999999999 57
Q ss_pred CHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc-
Q 008898 332 SLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE- 405 (549)
Q Consensus 332 sL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~- 405 (549)
+|.+++.+ +++.....++.|++.||.|||+. +|+||||||+|||++.+ +.++++||+.+...........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~-~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGD-GLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCC-CcEEEechHHHhhhhccCccccc
Confidence 99998865 56677778999999999999999 99999999999999988 6899999986532211110000
Q ss_pred -CccccccccCCccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh------------
Q 008898 406 -NVKPVNVVGTFGYLAPEYMMYG--KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL------------ 470 (549)
Q Consensus 406 -~~~~~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~------------ 470 (549)
........++..|+|||++.+. .++.++|||||||++|||++|..||..................
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 0001112356679999998764 4789999999999999999999999765432211111000000
Q ss_pred -------------------cccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 471 -------------------SSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 471 -------------------~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
..+......+..+...........+.++++.||..||.+|||+.++++ |+||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~-----~~~~~~~~ 315 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS-----HAFFKQVK 315 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh-----CHHHHHHH
Confidence 000000111111122223345667899999999999999999999999 89998776
Q ss_pred HH
Q 008898 532 EK 533 (549)
Q Consensus 532 ~~ 533 (549)
++
T Consensus 316 ~~ 317 (328)
T cd08226 316 EQ 317 (328)
T ss_pred Hh
Confidence 65
No 304
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.6e-36 Score=306.73 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=199.0
Q ss_pred CCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCC
Q 008898 256 PKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGS 332 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gs 332 (549)
....||+|+||.||++.. .+++.+|+|++..... ..+.+.+|+.+++.++||||+++++++..++.+++++||+ +++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 344699999999999976 5689999999865432 3456789999999999999999999999999999999999 678
Q ss_pred HHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcccc
Q 008898 333 LKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPV 410 (549)
Q Consensus 333 L~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 410 (549)
|.+++.. +++.....++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++...... .....
T Consensus 105 L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~-~~~kL~dfg~~~~~~~~-----~~~~~ 175 (297)
T cd06659 105 LTDIVSQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKD-----VPKRK 175 (297)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccC-CcEEEeechhHhhcccc-----ccccc
Confidence 9888754 67888899999999999999999 99999999999999998 68999999998543221 11123
Q ss_pred ccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHH
Q 008898 411 NVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNRE 490 (549)
Q Consensus 411 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 490 (549)
...|++.|+|||++.+..++.++|||||||++|||++|..||....... .+.. +. ... .+... ....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~----~~-~~~-----~~~~~--~~~~ 242 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-AMKR----LR-DSP-----PPKLK--NAHK 242 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH----Hh-ccC-----CCCcc--ccCC
Confidence 4568999999999998889999999999999999999999997544321 1111 10 000 00000 0112
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHH
Q 008898 491 EIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 491 ~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
....+.+++..|+..+|.+||++.++++ |+|+....-.+.
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~-----~~~~~~~~~~~~ 282 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLD-----HPFLLQTGLPEC 282 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhh-----ChhhccCCCccc
Confidence 2345778889999999999999999999 788876654333
No 305
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=9.1e-36 Score=294.32 Aligned_cols=244 Identities=27% Similarity=0.426 Sum_probs=193.6
Q ss_pred CCCCceEcccCceEEEEEEecC-----CcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 254 FSPKMLIGQGGNSKVYRTNHVD-----GQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~~-----g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
|.+.+.||.|+||.||++...+ +..+|+|.++.... ....+..|+.+++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3566789999999999997743 38899999976654 3467889999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 327 NLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 327 e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|++ +++|.+++.. +++.....++.|++.||.|||+. +++|+||||+||+++++ +.++|+|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGEN-LVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccC-CeEEEcccCCceecccc
Confidence 999 6799999853 67888899999999999999999 99999999999999998 68999999998665443
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
...... ...+++.|+|||.+.+..++.++|+|||||++|+|++ |.+||....... +. ........
T Consensus 157 ~~~~~~----~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~--~~---~~~~~~~~----- 222 (258)
T smart00219 157 DYYKKK----GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE--VL---EYLKKGYR----- 222 (258)
T ss_pred cccccc----cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---HHHhcCCC-----
Confidence 211111 2237789999999988889999999999999999998 788886533211 11 11111110
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLF 520 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 520 (549)
... ....+..+.+++.+|+..||.+|||+.++++.|
T Consensus 223 -~~~----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 -LPK----PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCC----CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011 112345678889999999999999999999864
No 306
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.5e-36 Score=310.98 Aligned_cols=271 Identities=23% Similarity=0.318 Sum_probs=203.6
Q ss_pred CHHHHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEc
Q 008898 243 TSQELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHS 318 (549)
Q Consensus 243 ~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~ 318 (549)
...++-.+.++|...+.||+|+||.||++.. .+|+.||+|+++..... .+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3445566788999999999999999999976 57899999999754322 3457789999999999999999998853
Q ss_pred C------CeEEEEEeccCCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEee
Q 008898 319 K------EMYAIVYNLLNGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSD 390 (549)
Q Consensus 319 ~------~~~~lv~e~~~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~D 390 (549)
. ..+++++++++++|.+++.. +++..+..++.|+++||.|||+. +|+||||||+||+++.+ +.++|+|
T Consensus 88 ~~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~-~~~kl~d 163 (345)
T cd07877 88 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNED-CELKILD 163 (345)
T ss_pred cccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCC-CCEEEec
Confidence 3 35788999999999888754 77888899999999999999999 99999999999999998 6899999
Q ss_pred eccccccccccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHh
Q 008898 391 FGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSL 469 (549)
Q Consensus 391 FGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~ 469 (549)
||++..... ......|++.|+|||.+.+ ..++.++|||||||++|||++|+.||........ +.......
T Consensus 164 fg~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~ 234 (345)
T cd07877 164 FGLARHTDD--------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLV 234 (345)
T ss_pred ccccccccc--------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHh
Confidence 999854321 1224468899999998876 4688999999999999999999999965433211 11111000
Q ss_pred hc--ccccc---------------cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 470 LS--SGLCE---------------RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 470 ~~--~~~~~---------------~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
.. ..... ......... ........+.+++..|+..||.+||++.+++. |+||.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~-----h~~f~~~~~ 308 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALA-----HAYFAQYHD 308 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhh-hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc-----ChhhhhcCC
Confidence 00 00000 000000000 00012345788999999999999999999998 899985443
No 307
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.1e-35 Score=296.56 Aligned_cols=233 Identities=21% Similarity=0.343 Sum_probs=179.3
Q ss_pred eEcccCceEEEEEEecC-------------CcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 259 LIGQGGNSKVYRTNHVD-------------GQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~-------------g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
.||+|+||.||+|...+ ...+++|++...... ...+.+|+.+++.++||||+++++++..+...++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 58999999999996422 235888887654322 2457788999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC------ceEEeeecc
Q 008898 325 VYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH------HPQLSDFGA 393 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~------~~kL~DFGl 393 (549)
+|||+ +|+|..++.. +++.....++.||++||.|||+. +|+||||||+|||++.+.. .++++|||+
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred EEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99999 5788888753 67788889999999999999999 9999999999999986521 279999998
Q ss_pred ccccccccccccCccccccccCCccccccccc-cCCCCchhhHHHHHHHHHHHH-cCCCCCCCcccchhhHHHHHHHhhc
Q 008898 394 AMVHHQSHQVSENVKPVNVVGTFGYLAPEYMM-YGKVDEKIDVYSYGVVLLELI-TGKEAIQTNKANRESLVLWARSLLS 471 (549)
Q Consensus 394 a~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~ell-tG~~p~~~~~~~~~~l~~~~~~~~~ 471 (549)
+..... .....|+..|+|||.+. +..++.++|||||||++|||+ +|..|+........ . . ...
T Consensus 159 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~-~----~~~ 223 (262)
T cd05077 159 PITVLS---------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-E-R----FYE 223 (262)
T ss_pred CccccC---------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-H-H----HHh
Confidence 854321 12345788999999887 466899999999999999998 58888765432111 0 0 000
Q ss_pred ccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 008898 472 SGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLF 520 (549)
Q Consensus 472 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 520 (549)
+.. . ... .....+.+++..||+.||.+||++.+|++.|
T Consensus 224 -~~~-~-----~~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 -GQC-M-----LVT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred -cCc-c-----CCC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 0 011 1134578899999999999999999999865
No 308
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=7.2e-36 Score=300.01 Aligned_cols=249 Identities=25% Similarity=0.426 Sum_probs=193.5
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCc----EEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQ----VAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
.+|+..+.||+|+||.||+|... +|. .+|+|.++.... ....+.+|+.+++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46888899999999999999763 343 689998875543 23567889999999999999999999987 67888
Q ss_pred EEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
+|||+ +|+|.+++.. +++.....++.||+.||.|||+. +|+|+||||+||+++.+ +.++|+|||++.....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~-~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCC-CeEEECCCcccccccC
Confidence 99998 7899999864 67888899999999999999998 99999999999999988 6899999999876542
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.... .......++..|+|||.+....++.++|+|||||++|||++ |+.||....... + ........ ..
T Consensus 162 ~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~---~~~~~~~~---~~ 230 (279)
T cd05057 162 DEKE---YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--I---PDLLEKGE---RL 230 (279)
T ss_pred cccc---eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--H---HHHHhCCC---CC
Confidence 2111 11112224568999999988899999999999999999998 999997654321 1 11111111 01
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
.. +..+...+.+++..||..||..||++.++++.|+..
T Consensus 231 ~~-------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 231 PQ-------PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred CC-------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11 111223577888999999999999999999987653
No 309
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=9.6e-36 Score=299.15 Aligned_cols=260 Identities=24% Similarity=0.333 Sum_probs=197.5
Q ss_pred CCCCceEcccCceEEEEEEec-CCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC--CeEEEEEe
Q 008898 254 FSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSK--EMYAIVYN 327 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e 327 (549)
|.+.+.||.|+||.||++... +|+.+|+|.+.... .....+.+|+.+++.++|||++++++++... +..+++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567788999999999999874 58999999998653 2235678899999999999999999999887 89999999
Q ss_pred ccCCCHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.++|.+++. .+++...+.++.||++||.|||+. +++|+||+|+||+++++ +.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~-~~~~l~d~g~~~~~~~~~~- 155 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINND-GVLKLADFGLARPYTKRNS- 155 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCC-CCEEEccccceeeccCCCc-
Confidence 99989998884 367788899999999999999999 99999999999999998 6899999999865543221
Q ss_pred ccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--cccccccC
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--GLCERLID 480 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~~d 480 (549)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .+.......... .....+.+
T Consensus 156 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 156 ---ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred ---ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhcccccc
Confidence 11223457889999998765 357899999999999999999999997655321 111111110000 00000000
Q ss_pred --------------CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 481 --------------PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 481 --------------~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..+...+...+...+.+++..|+..+|.+||+++++++ ++||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~-----~~~~ 287 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ-----HEYF 287 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh-----CcCC
Confidence 00001111112567888999999999999999999998 7775
No 310
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-37 Score=315.03 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=204.3
Q ss_pred CCCCCceEcccCceEEEEEEecC-CcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVD-GQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~-g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+......||-|-||.||.|.++. .-.+|||.++.+....++|+.|..+|+.++|||+|+|+|+|..+..+||+.||| .
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 34455689999999999998744 668999999988888899999999999999999999999999999999999999 8
Q ss_pred CCHHHHHHHh-----chhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 GSLKQYLKQL-----KWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 gsL~~~l~~~-----~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
|+|.+||+.. ..--.+.++.||+.|++||..+ ++|||||...|+|+.++ ..+|++|||+++.+....+...
T Consensus 348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEn-hiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN-HIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhcccccc-ceEEeeccchhhhhcCCceecc
Confidence 9999999763 3344678999999999999999 99999999999999999 5899999999988765433222
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
.. ..-.+.|.|||.+.++.++.|+|||+|||+|||+.| |..|+..-+..+ + . .++...+.
T Consensus 424 AG----AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq--V---Y----------~LLEkgyR 484 (1157)
T KOG4278|consen 424 AG----AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V---Y----------GLLEKGYR 484 (1157)
T ss_pred cC----ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH--H---H----------HHHhcccc
Confidence 11 122567999999999999999999999999999988 777876554322 1 1 12222333
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
-..+..|+..+++|++.||+.+|.+||++.|+-+.|+.
T Consensus 485 M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEt 522 (1157)
T KOG4278|consen 485 MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFET 522 (1157)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence 33456677889999999999999999999999987754
No 311
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=290.61 Aligned_cols=256 Identities=26% Similarity=0.328 Sum_probs=199.2
Q ss_pred hhcCCCCC-ceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEE----cCCeE
Q 008898 250 LTHNFSPK-MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCH----SKEMY 322 (549)
Q Consensus 250 ~~~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~----~~~~~ 322 (549)
++++|.+. ++||-|-.|+|.-+.+ .+|+++|+|++..+ ....+|++.--.. .|||||.++++|+ ....+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 46677654 4799999999999976 67999999998744 4567888865444 5999999999874 35689
Q ss_pred EEEEecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC--CCceEEeeeccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN--FHHPQLSDFGAA 394 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~~kL~DFGla 394 (549)
.+|||++ +|.|+..++. +++.+...|+.||+.|+.|||+. +|.||||||+|+|.+.. ...+||+|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccc
Confidence 9999999 7889999864 77888889999999999999999 99999999999999643 146899999999
Q ss_pred cccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc
Q 008898 395 MVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL 474 (549)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 474 (549)
+... ......+.+-||.|.|||++...+|+...|+||+||++|-||+|.+||.+.....-+- -.+..+..+.
T Consensus 212 K~t~------~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp--gMk~rI~~gq 283 (400)
T KOG0604|consen 212 KETQ------EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKRRIRTGQ 283 (400)
T ss_pred cccC------CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh--hHHhHhhccC
Confidence 6532 2344557789999999999999999999999999999999999999999876421110 0111111111
Q ss_pred cccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 475 CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 475 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
. .+.++ -=....+...++|+.+|+.+|.+|.|+.+++. |+|+.+..
T Consensus 284 y-~FP~p-----EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~-----hpwi~~~~ 329 (400)
T KOG0604|consen 284 Y-EFPEP-----EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD-----HPWINQYE 329 (400)
T ss_pred c-cCCCh-----hHhHHHHHHHHHHHHHhcCCchhheeHHHhhc-----Cchhcccc
Confidence 0 00111 01234567788999999999999999999998 89976543
No 312
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.1e-36 Score=311.21 Aligned_cols=273 Identities=22% Similarity=0.291 Sum_probs=204.2
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEE----cCCeE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCH----SKEMY 322 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~----~~~~~ 322 (549)
.++|+..+.||+|+||.||++.. .+|+.||+|++.... .....+.+|+.+++.++||||+++++++. ....+
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 46899999999999999999976 569999999987542 22356778999999999999999998875 33578
Q ss_pred EEEEeccCCCHHHHHH---HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 323 AIVYNLLNGSLKQYLK---QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 323 ~lv~e~~~gsL~~~l~---~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
+++|||+.|+|.+++. .+++.....++.||+.||.|||+. +|+||||||+||+++.+ +.++|+|||++.....
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 84 YVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNED-CELRIGDFGMARGLSS 159 (334)
T ss_pred EEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCC-CcEEecccccceeecc
Confidence 9999999999999884 367888899999999999999999 99999999999999998 6899999999865433
Q ss_pred ccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc-------
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS------- 471 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~------- 471 (549)
.... .........|+..|+|||.+.. ..++.++|||||||++|||++|+.||....... .+..+......
T Consensus 160 ~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 160 SPTE-HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cCcC-CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHHHHHhCCChhHhhh
Confidence 2111 1112234578999999998865 458999999999999999999999997654321 11111110000
Q ss_pred ---ccccccccC---Cccc---ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 472 ---SGLCERLID---PQLN---EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 472 ---~~~~~~~~d---~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
........+ .... ..........+.++++.||+.+|.+||++.+++. |+|+......+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~-----~~~~~~~~~~~ 304 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ-----HPFLAQYHDPD 304 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh-----ChhhhhccCCc
Confidence 000000000 0000 0111223567889999999999999999999999 89997655443
No 313
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=312.58 Aligned_cols=246 Identities=25% Similarity=0.395 Sum_probs=200.0
Q ss_pred CCCCceEcccCceEEEEEEecC---Cc--EEEEEEeecCC--cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 254 FSPKMLIGQGGNSKVYRTNHVD---GQ--VAAVKVLKCTN--WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~~---g~--~~AvK~l~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
....++||+|-||.||+|.+.+ |. .||||..+.+. .+.+.|+.|..+|+.+.||||++|+|+|.+. ..+|||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEE
Confidence 4455689999999999996532 33 68899998644 3457799999999999999999999999874 577889
Q ss_pred ecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 327 NLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 327 e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
|++ -|.|.+||++ ++......+++||+.||.|||+. .++||||...|||+.+. ..+||+|||++++.....
T Consensus 470 EL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp-~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSP-QCVKLADFGLSRYLEDDA 545 (974)
T ss_pred ecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCc-ceeeecccchhhhccccc
Confidence 988 7999999976 55566677899999999999999 99999999999999988 589999999999877654
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
+.... ...-...|||||.+....++.++|||-|||.+||++. |..||+.-...+.. . -+.
T Consensus 546 yYkaS----~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI--------------~-~iE 606 (974)
T KOG4257|consen 546 YYKAS----RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI--------------G-HIE 606 (974)
T ss_pred hhhcc----ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE--------------E-Eec
Confidence 43332 2233568999999999999999999999999999876 99999876654321 1 111
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
..-.-+.++.++..+..++.+||+++|.+||++.+|...|.+.
T Consensus 607 nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 607 NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 1222344667788899999999999999999999998877553
No 314
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.5e-35 Score=298.42 Aligned_cols=251 Identities=26% Similarity=0.346 Sum_probs=191.5
Q ss_pred eEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHh---cCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 259 LIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLS---SIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~---~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
+||+|+||.||++.. .+++.+|+|.+...... ...+.+|..+++ ..+||||+.+++++..++.++++|||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999987 56899999998654321 122344544433 447999999999999999999999999
Q ss_pred CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 ~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+|+|.+++.. +++.....++.|++.||.|||+. +|+||||||+|||++++ +.++|+|||++......
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~-~~~~l~dfg~~~~~~~~------ 150 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEH-GHVRISDLGLACDFSKK------ 150 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCC-CCEEEccCCcceecccc------
Confidence 6789988854 68888899999999999999999 99999999999999988 68999999998543221
Q ss_pred ccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
......||+.|+|||.+.. ..++.++|||||||++|+|++|..||......... ...... ......+
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~-------~~~~~~~-- 218 (279)
T cd05633 151 -KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMT-------LTVNVEL-- 218 (279)
T ss_pred -CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHh-------hcCCcCC--
Confidence 1123468999999998874 55899999999999999999999999755432111 111100 0011122
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHHHHHh
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKEELLN 538 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~~~~~ 538 (549)
+......+.+++..||..||.+|| +++++++ |+||+..+....-+.
T Consensus 219 --~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~-----h~~~~~~~~~~~~~~ 269 (279)
T cd05633 219 --PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE-----HVFFKGIDWQQVYLQ 269 (279)
T ss_pred --ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh-----CccccCCCHhHHhcC
Confidence 223345677888999999999999 6999998 899988765554433
No 315
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.5e-35 Score=300.38 Aligned_cols=261 Identities=22% Similarity=0.293 Sum_probs=197.6
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|...+.||+|+||.||++.+ .+++.+|+|.++.... ....+.+|+++++.++||||+++++.+..++.++++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3688899999999999999987 4588999999875432 1245778999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|+|.++++. +++.....++.|++.||.|||+. +++||||||+||+++.+ +.++|+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~-~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSM-GHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCC-CCEEEeeCCCccccCcCcc
Confidence 999 6799999865 56777888999999999999999 99999999999999988 6899999998853211100
Q ss_pred c----------ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc
Q 008898 403 V----------SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS 472 (549)
Q Consensus 403 ~----------~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 472 (549)
. ..........|+..|+|||.+.+..++.++|+|||||++|||++|..||....... .+ ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-~~----~~~~~~ 231 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LF----GQVISD 231 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HH----HHHHhc
Confidence 0 00011123467889999999998889999999999999999999999997543221 11 111100
Q ss_pred cccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 473 GLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 473 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
....+.... ..+..+.+++.+||+.||++||+..+++++|+ |+|+....
T Consensus 232 ----~~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~--~~~~~~~~ 280 (305)
T cd05609 232 ----DIEWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQ--HRFFLGLD 280 (305)
T ss_pred ----ccCCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHh--CccccCCC
Confidence 011111111 23445788899999999999999544444443 57764433
No 316
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.3e-36 Score=303.76 Aligned_cols=248 Identities=25% Similarity=0.417 Sum_probs=190.5
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCc----EEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQ----VAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 324 (549)
++|+..+.||+|+||.||++.. .+|. .+|+|.+...... ..++.+|+.+++.++||||++++++|.... .++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT-IQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC-cee
Confidence 5688889999999999999976 3454 5788888754322 235788999999999999999999997654 567
Q ss_pred EEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 325 VYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
+++|+ +|+|.+++.. +++.....++.|++.||.|||+. +|+|+||||+||+++.+ +.+||+|||++.....
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~-~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSP-NHVKITDFGLARLLEG 161 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCC-CceEEccccccccccC
Confidence 78887 6899999854 56778889999999999999999 99999999999999988 6899999999976543
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
... ........++..|+|||.+.+..++.++|||||||++|||++ |..||...... ....+.. .+. ..
T Consensus 162 ~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~~~----~~~--~~ 230 (303)
T cd05110 162 DEK---EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDLLE----KGE--RL 230 (303)
T ss_pred ccc---ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH----CCC--CC
Confidence 211 111123345778999999998999999999999999999997 89998654321 1111111 110 00
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. . ...+...+.+++..||..+|++||++.++++.|..
T Consensus 231 ~---~----~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~ 267 (303)
T cd05110 231 P---Q----PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR 267 (303)
T ss_pred C---C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0 0 11123457788899999999999999999998764
No 317
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4e-36 Score=310.89 Aligned_cols=265 Identities=24% Similarity=0.319 Sum_probs=200.4
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC-----Ce
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSK-----EM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~ 321 (549)
.++|...+.||+|+||.||++.+ .+++.+|||.++... .....+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 46799999999999999999976 568999999987532 2234677899999999999999999987643 35
Q ss_pred EEEEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 322 YAIVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
.++++||++++|.+++.. ++......++.|++.||.|||++ +++|+||||+||+++.+ +.++|+|||++....
T Consensus 84 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNAN-CDLKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCC-CCEEECcCccccccC
Confidence 899999999999998854 67788899999999999999999 99999999999999988 689999999986543
Q ss_pred cccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc------
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS------ 471 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~------ 471 (549)
... .......|+..|+|||.+.. ..++.++|||||||++|+|++|++||....... ...........
T Consensus 160 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 160 EKG-----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITELLGSPSEEDL 233 (337)
T ss_pred CCc-----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCChHHh
Confidence 221 11224467889999998875 468999999999999999999999997643211 11111110000
Q ss_pred ----ccccc-------cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 472 ----SGLCE-------RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 472 ----~~~~~-------~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
..... ...++... .........+.+++++||+.+|.+|||++++++ |+|+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~-----h~~~~~~~ 298 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALA-----HPYLASLH 298 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHc-----Ccchhhhc
Confidence 00000 00000000 011123456789999999999999999999999 89997643
No 318
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.6e-37 Score=318.11 Aligned_cols=247 Identities=29% Similarity=0.455 Sum_probs=192.7
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecC-----CcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC--eEEEEEecc
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCT-----NWSEEEVLREVELLSSIKHENIVRIIGYCHSKE--MYAIVYNLL 329 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~-----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~lv~e~~ 329 (549)
.+||+|+|-+||+|.+ .+|..||--.++.+ ....+.+..|+.+|+.|+||||+++|.+|.+.. .+-++.|++
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 3599999999999976 56888875444322 222367889999999999999999999997554 588889999
Q ss_pred -CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 -NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 -~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
.|+|..|+++ ........++.||++||.|||++ +.+|||||||-+||||+.+.|.+||+|.|+|.....++
T Consensus 126 TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~---- 200 (632)
T KOG0584|consen 126 TSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH---- 200 (632)
T ss_pred cCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc----
Confidence 8999999976 45556678999999999999997 66999999999999999999999999999998755432
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
...++|||.|||||+.. ..|++.+||||||+.|+||+|+..||..=. +...++.-+..-.....+..+-|
T Consensus 201 ---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~-n~AQIYKKV~SGiKP~sl~kV~d----- 270 (632)
T KOG0584|consen 201 ---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT-NPAQIYKKVTSGIKPAALSKVKD----- 270 (632)
T ss_pred ---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC-CHHHHHHHHHcCCCHHHhhccCC-----
Confidence 23478999999999776 889999999999999999999999986322 22222211111111111222222
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
..+.++|.+||.. ..+|||+.|+|+ |+||.....
T Consensus 271 -------Pevr~fIekCl~~-~~~R~sa~eLL~-----d~Ff~~d~g 304 (632)
T KOG0584|consen 271 -------PEVREFIEKCLAT-KSERLSAKELLK-----DPFFDEDGG 304 (632)
T ss_pred -------HHHHHHHHHHhcC-chhccCHHHHhh-----Chhhccccc
Confidence 3477888999999 999999999998 777766533
No 319
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.3e-35 Score=302.50 Aligned_cols=239 Identities=30% Similarity=0.426 Sum_probs=191.4
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.|...+.||+|+||.||++.. .++..+|+|.+...... ...+.+|+.+++.++|||++++++++.+++..+++||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 366778899999999999986 56899999998754321 2457889999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.|+|.+++.. +++.++..++.|++.||.|||+. +|+|+||+|+||+++.+ +.++|+|||++.....
T Consensus 106 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~-~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 106 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEP-GQVKLADFGSASIASP---- 177 (317)
T ss_pred CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCC-CCEEEecCCCccccCC----
Confidence 999998887743 67788889999999999999999 99999999999999988 6899999998754321
Q ss_pred ccCccccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 404 SENVKPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
.....|++.|+|||++. .+.++.++|||||||++|||++|..||....... ....+.. ...
T Consensus 178 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~----~~~------ 241 (317)
T cd06635 178 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQ----NES------ 241 (317)
T ss_pred -----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHh----ccC------
Confidence 12346889999999874 4568899999999999999999999986543211 1111111 100
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
+ ..........+.+++.+||+.+|.+||++.++++
T Consensus 242 ~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 242 P---TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred C---CCCCccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence 0 1111233456888999999999999999999998
No 320
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.4e-35 Score=290.50 Aligned_cols=250 Identities=28% Similarity=0.372 Sum_probs=203.0
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC--CeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSK--EMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~ 326 (549)
+|...+.||+|++|.||+|... +++.+++|++..... ..+.+.+|+.++++++||||+++++.+... +.+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777889999999999999874 689999999976552 345688999999999999999999999888 8999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
|++ +++|.+++.. +++..+..++.|++.||.|||+. +++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSD-GVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCC-CCEEEcccccEEecccccc
Confidence 999 7899999864 57888899999999999999998 99999999999999998 6899999999866544321
Q ss_pred cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
. .......++..|+|||.+.+..++.++||||||+++|+|++|..||.......... ... ....
T Consensus 157 ~---~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~---------~~~~ 220 (260)
T cd06606 157 G---EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL----YKI---------GSSG 220 (260)
T ss_pred c---ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH----Hhc---------cccC
Confidence 1 11234568899999999998889999999999999999999999997665211111 111 1111
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
....++......+.+++.+|+..+|.+||++.++++ |+|+
T Consensus 221 ~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~-----~~~~ 260 (260)
T cd06606 221 EPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ-----HPFL 260 (260)
T ss_pred CCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh-----CCCC
Confidence 112223333567888999999999999999999999 7885
No 321
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.3e-35 Score=306.48 Aligned_cols=271 Identities=21% Similarity=0.294 Sum_probs=201.2
Q ss_pred hcCCCC-CceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCH---------------HHHHHHHHHHhcCCCCCeeeEE
Q 008898 251 THNFSP-KMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSE---------------EEVLREVELLSSIKHENIVRII 313 (549)
Q Consensus 251 ~~~f~~-~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~---------------~~~~~E~~il~~l~h~nIv~l~ 313 (549)
.++|.. .+.||.|+||.||++.. .+++.+|+|.++...... ..+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 456664 57799999999999976 468999999987543221 2467899999999999999999
Q ss_pred EEEEcCCeEEEEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEee
Q 008898 314 GYCHSKEMYAIVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSD 390 (549)
Q Consensus 314 ~~~~~~~~~~lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~D 390 (549)
+++..++.++++|||+.|+|.+++.. ++......++.|++.||.|||+. +|+|+||+|+||+++.+ +.++|+|
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~-~~~kl~d 162 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSK-GICKIAD 162 (335)
T ss_pred EEEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCC-CCEEECC
Confidence 99999999999999999999999854 67788889999999999999999 99999999999999988 6899999
Q ss_pred ecccccccccccc---------ccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchh
Q 008898 391 FGAAMVHHQSHQV---------SENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRE 460 (549)
Q Consensus 391 FGla~~~~~~~~~---------~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~ 460 (549)
||++......... ..........+++.|+|||.+.+.. ++.++|+|||||++|||++|.+||.......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~- 241 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID- 241 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 9998654421100 0111112345788999999987654 6899999999999999999999997665322
Q ss_pred hHHHHHHHhhcccc---cccc-------cCCccc---ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 461 SLVLWARSLLSSGL---CERL-------IDPQLN---EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 461 ~l~~~~~~~~~~~~---~~~~-------~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.+............ .... ...... ..........+.+++..||..+|.+|||+.+++. |+||
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~-----~~~~ 316 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK-----HEYF 316 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc-----Cccc
Confidence 11111111110000 0000 000000 0001122456788999999999999999999998 8999
Q ss_pred hhhh
Q 008898 528 KMKR 531 (549)
Q Consensus 528 ~~~~ 531 (549)
....
T Consensus 317 ~~~~ 320 (335)
T PTZ00024 317 KSDP 320 (335)
T ss_pred CCCC
Confidence 7543
No 322
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.8e-35 Score=295.23 Aligned_cols=245 Identities=24% Similarity=0.398 Sum_probs=191.9
Q ss_pred CCCCCceEcccCceEEEEEEecC--CcEEEEEEeecCC-----------cCHHHHHHHHHHHhc-CCCCCeeeEEEEEEc
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVD--GQVAAVKVLKCTN-----------WSEEEVLREVELLSS-IKHENIVRIIGYCHS 318 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~--g~~~AvK~l~~~~-----------~~~~~~~~E~~il~~-l~h~nIv~l~~~~~~ 318 (549)
+|+..+.||+|+||.||++.... ++.+|+|.+.... ....++..|+.++.. ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778889999999999998744 7899999886322 112346778888864 799999999999999
Q ss_pred CCeEEEEEecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCCceEEe
Q 008898 319 KEMYAIVYNLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFHHPQLS 389 (549)
Q Consensus 319 ~~~~~lv~e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~~kL~ 389 (549)
++..+++|||+ +++|.+++.. +++...+.++.|++.||.|||+ . +++|+||+|+||+++.+ +.++|+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~-~~~~l~ 156 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGED-DKVTIT 156 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCC-CcEEEe
Confidence 99999999999 6689888743 5667788999999999999996 5 89999999999999998 689999
Q ss_pred eeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHh
Q 008898 390 DFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSL 469 (549)
Q Consensus 390 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~ 469 (549)
|||++....... ......|+..|+|||.+.++.++.++|+||||+++|+|++|+.||....... .....
T Consensus 157 dfg~~~~~~~~~------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-----~~~~~ 225 (269)
T cd08528 157 DFGLAKQKQPES------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-----LATKI 225 (269)
T ss_pred cccceeeccccc------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-----HHHHH
Confidence 999986543321 2234568999999999998889999999999999999999999996543221 11111
Q ss_pred hcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 470 LSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 470 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
... ...+.... .....+.+++.+||..||.+||++.++...|.
T Consensus 226 ~~~-----~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 VEA-----VYEPLPEG----MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hhc-----cCCcCCcc----cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111 11111111 22356788889999999999999999999875
No 323
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.6e-36 Score=298.37 Aligned_cols=247 Identities=26% Similarity=0.308 Sum_probs=198.8
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCC----cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTN----WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
+|...+.||.|+||.||++... ++..+|+|++.... ...+.+.+|++++++++||||+++++++.+++.+++++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999874 68999999997543 223568899999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+ +++|.+++.. ++......++.||++||.|||++ +++|+||+|+||+++++ +.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQ-GHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCC-CCEEEeecccccccCCCc--
Confidence 99 6789999853 66778889999999999999999 99999999999999998 689999999986543221
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||....... ...+... ... .
T Consensus 155 ----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~-~~~------~---- 217 (258)
T cd05578 155 ----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAK-QET------A---- 217 (258)
T ss_pred ----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHH-hcc------c----
Confidence 2234568889999999998889999999999999999999999998665321 1111111 110 0
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCH--HHHHHHhcCCchhh
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTM--KTLLKLFQEPDYWL 527 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~--~evl~~L~~~~~w~ 527 (549)
....+...+..+.+++.+||..||.+||++ +++++ |+||
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~-----~~~~ 258 (258)
T cd05578 218 DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN-----HPYF 258 (258)
T ss_pred cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc-----CCCC
Confidence 011222334677888999999999999999 88776 6775
No 324
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.5e-35 Score=295.24 Aligned_cols=258 Identities=23% Similarity=0.371 Sum_probs=195.9
Q ss_pred CCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcC---HHHHHHHHHHHhcC---CCCCeeeEEEEEEcCCe-----
Q 008898 254 FSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS---EEEVLREVELLSSI---KHENIVRIIGYCHSKEM----- 321 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~----- 321 (549)
|++.+.||+|+||.||++.+. +++.+|+|+++..... ...+.+|+.+++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567788999999999999875 5899999999754322 23466788777665 69999999999987776
Q ss_pred EEEEEeccCCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 322 YAIVYNLLNGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
++++||+++++|.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++.+ +.++|+|||++..
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~-~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSD-GQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccC-CCEEEeccCccee
Confidence 999999999899988854 67788899999999999999999 99999999999999999 7999999999865
Q ss_pred cccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
.... .......+++.|+|||.+.+..++.++|+|||||++|||++|.+||..... .+.+..+...........
T Consensus 157 ~~~~------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 157 YSFE------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEE 229 (287)
T ss_pred ccCC------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHh
Confidence 4322 111233578899999999998999999999999999999999999876543 222222222111111000
Q ss_pred cc---------cCCccc---ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 477 RL---------IDPQLN---EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 477 ~~---------~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.. ...... ..........+.+++..||..||.+||++.++++ |+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~-----~~~~ 287 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ-----HPYF 287 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc-----CcCC
Confidence 00 000000 1111233466788999999999999999999998 7885
No 325
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.5e-35 Score=305.66 Aligned_cols=268 Identities=23% Similarity=0.315 Sum_probs=202.4
Q ss_pred HhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEc-CCeE
Q 008898 248 CHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHS-KEMY 322 (549)
Q Consensus 248 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~ 322 (549)
..++++|+..+.||.|+||.||++.. .+++.+|+|++.... .....+.+|+++++.++||||+++++++.. .+.+
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 34678999999999999999999976 579999999886432 223567889999999999999999998865 5678
Q ss_pred EEEEeccCCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 323 AIVYNLLNGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 323 ~lv~e~~~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
++++||++++|.++++. ++......++.|+++||.|||+. +|+|+||+|+||+++++ +.++|+|||++.....
T Consensus 86 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~-~~~~l~dfg~~~~~~~- 160 (328)
T cd07856 86 YFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINEN-CDLKICDFGLARIQDP- 160 (328)
T ss_pred EEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCC-CCEEeCccccccccCC-
Confidence 89999999999998864 56666778999999999999999 99999999999999988 6899999999854221
Q ss_pred cccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHH-----------
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARS----------- 468 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~----------- 468 (549)
......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||....... .+..+...
T Consensus 161 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 161 -------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN-QFSIITDLLGTPPDDVINT 232 (328)
T ss_pred -------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence 1123467889999998766 568999999999999999999999997654311 11111111
Q ss_pred hhcccccccccCCcccccCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 469 LLSSGLCERLIDPQLNEEYN-----REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 469 ~~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
.........+..-......+ ......+.++++.|+..+|++|||+.+++. |+|+...+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~-----~~~~~~~~~~ 297 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA-----HPYLAPYHDP 297 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc-----CCccccccCC
Confidence 00010000000000001111 123467888999999999999999999998 8898655543
No 326
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.5e-36 Score=298.21 Aligned_cols=234 Identities=21% Similarity=0.373 Sum_probs=180.5
Q ss_pred eEcccCceEEEEEEecC-C-------cEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 259 LIGQGGNSKVYRTNHVD-G-------QVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~-g-------~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
.||+|+||.||+|.... + ..+|+|.+...... .+.+.+|+.+++.++||||+++++++..++..+++|||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 58999999999996532 2 34888887644322 356788999999999999999999999988999999999
Q ss_pred -CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC-------ceEEeeecccccc
Q 008898 330 -NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH-------HPQLSDFGAAMVH 397 (549)
Q Consensus 330 -~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~-------~~kL~DFGla~~~ 397 (549)
+|+|.+++.. +++.....++.||+.||.|||++ +|+||||||+||+++.+.. .++++|||++...
T Consensus 82 ~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 82 KFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 6789999854 67778888999999999999999 9999999999999987632 2699999987543
Q ss_pred ccccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCC-CCCCCcccchhhHHHHHHHhhccccc
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGK-EAIQTNKANRESLVLWARSLLSSGLC 475 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~-~p~~~~~~~~~~l~~~~~~~~~~~~~ 475 (549)
.. .....+++.|+|||.+.+. .++.++|||||||++|||++|. .|+....... .. ... ..
T Consensus 159 ~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~-~~~----~~--- 220 (258)
T cd05078 159 LP---------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KL-QFY----ED--- 220 (258)
T ss_pred CC---------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HH-HHH----Hc---
Confidence 21 1234688899999999864 5799999999999999999995 5554433211 11 000 00
Q ss_pred ccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 476 ERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 476 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
...++. .....+.+++..||+.||.+|||++++++.|+
T Consensus 221 ----~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 ----RHQLPA----PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ----cccCCC----CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 011111 12245788999999999999999999999763
No 327
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.2e-35 Score=296.91 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=192.7
Q ss_pred cCCCCCceEcccCceEEEEEEecC----CcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVD----GQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
++|...+.||+|+||.||+|.+.+ ...+|+|....... ..+.+.+|+.+++.++||||+++++++.+. ..+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-CcEEE
Confidence 458888999999999999997633 24789998865432 235688999999999999999999998764 46789
Q ss_pred Eecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|||+ +|+|.+++.. +++..+..++.+++.||.|||+. +++|+||||+||+++.+ +.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSP-DCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecC-CCeEEccCceeeecccc
Confidence 9998 6899999964 67888889999999999999998 99999999999999998 68999999998654432
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
... ......+++.|+|||.+....++.++|||||||++|||++ |..||....... .+ .. +.... .
T Consensus 161 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-~~-~~---~~~~~---~-- 226 (270)
T cd05056 161 SYY----KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND-VI-GR---IENGE---R-- 226 (270)
T ss_pred cce----ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH-HH-HH---HHcCC---c--
Confidence 111 1112234568999999988889999999999999999986 999997654321 11 11 11110 0
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.. .+...+..+.+++.+|+..+|.+|||+.++++.|++
T Consensus 227 -~~----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~ 264 (270)
T cd05056 227 -LP----MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD 264 (270)
T ss_pred -CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01 112334568888999999999999999999998765
No 328
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.1e-35 Score=293.05 Aligned_cols=245 Identities=23% Similarity=0.343 Sum_probs=181.3
Q ss_pred eEcccCceEEEEEEecCC---cEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCC
Q 008898 259 LIGQGGNSKVYRTNHVDG---QVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGS 332 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~g---~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gs 332 (549)
.||+|+||.||++...++ ..+++|.++.... ..+.+.+|+.+++.++||||+++++.|.+....+++|||+ +|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975443 3456676654332 2357889999999999999999999999999999999999 679
Q ss_pred HHHHHHHh-------chhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 333 LKQYLKQL-------KWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 333 L~~~l~~~-------~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
|.+++.+. .......++.||+.||.|||+. +++||||||+|||++.+ +.++|+|||++.........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~-~~~~l~Dfg~~~~~~~~~~~-- 155 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSD-LTVKVGDYGIGPSRYKEDYI-- 155 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCC-ccEEecccccccccCcchhh--
Confidence 99998642 3345567899999999999998 99999999999999988 68999999997543221111
Q ss_pred CccccccccCCcccccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMY-------GKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~-------~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
.......|+..|+|||++.. ..++.++|||||||++|||++ |..||..... .+.+.. ... +....
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~----~~~-~~~~~ 228 (268)
T cd05086 156 -ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-REVLNH----VIK-DQQVK 228 (268)
T ss_pred -hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH----HHh-hcccc
Confidence 11124568899999998753 245789999999999999997 4667754432 111111 111 11223
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
+.++.+...++ ..+.+++..|+ .+|.+||++++|++.|.
T Consensus 229 ~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 34444443333 34566778899 67999999999999875
No 329
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.1e-36 Score=309.09 Aligned_cols=267 Identities=21% Similarity=0.323 Sum_probs=201.5
Q ss_pred hhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCC----
Q 008898 249 HLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKE---- 320 (549)
Q Consensus 249 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~---- 320 (549)
.+.++|...+.||+|+||.||++.. .+|..||||++...... ...+.+|+.+++.++||||+++++++..+.
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 4567899999999999999999976 57999999998643222 245778999999999999999999886543
Q ss_pred --eEEEEEeccCCCHHHHHH--HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 321 --MYAIVYNLLNGSLKQYLK--QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 321 --~~~lv~e~~~gsL~~~l~--~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
.++++|++++++|.+++. .+++.....++.||++||.|||+. +|+||||||+||+++.+ +.++|+|||++..
T Consensus 92 ~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~-~~~kl~dfg~~~~ 167 (343)
T cd07880 92 FHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNED-CELKILDFGLARQ 167 (343)
T ss_pred cceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC-CCEEEeecccccc
Confidence 468999999889998885 477888899999999999999999 99999999999999988 6899999999864
Q ss_pred cccccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHH----------H
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVL----------W 465 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~----------~ 465 (549)
... ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||............ +
T Consensus 168 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 168 TDS--------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred ccc--------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 322 1223467899999999876 45889999999999999999999999765432111110 0
Q ss_pred HHHhhccc---ccccc---cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 466 ARSLLSSG---LCERL---IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 466 ~~~~~~~~---~~~~~---~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
...+.... ....+ ....+ ..........+.+++..|+..||.+|||+.++++ |+||+.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~-----~~~~~~~~~~ 307 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALA-----HPYFEEFHDP 307 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc-----CccHhhhcCc
Confidence 00000000 00000 00000 0001122345778999999999999999999998 8999876544
No 330
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.5e-35 Score=297.57 Aligned_cols=234 Identities=22% Similarity=0.352 Sum_probs=179.9
Q ss_pred eEcccCceEEEEEEecC-------------------------CcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeE
Q 008898 259 LIGQGGNSKVYRTNHVD-------------------------GQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRI 312 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~-------------------------g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l 312 (549)
.||+|+||.||+|.... ...+++|++...... ...+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999986411 135888988654322 2457789999999999999999
Q ss_pred EEEEEcCCeEEEEEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC----
Q 008898 313 IGYCHSKEMYAIVYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF---- 383 (549)
Q Consensus 313 ~~~~~~~~~~~lv~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~---- 383 (549)
+++|.+++..++||||+ +|+|..++.. +++..+..++.||+.||.|||+. +|+||||||+|||++.+.
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcccC
Confidence 99999999999999999 6789888854 67788899999999999999998 999999999999997541
Q ss_pred --CceEEeeeccccccccccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHH-cCCCCCCCcccch
Q 008898 384 --HHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELI-TGKEAIQTNKANR 459 (549)
Q Consensus 384 --~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~ell-tG~~p~~~~~~~~ 459 (549)
..++++|||++..... .....+++.|+|||.+.+ ..++.++|||||||++|||+ +|..||.......
T Consensus 159 ~~~~~kl~d~g~~~~~~~---------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 159 TSPFIKLSDPGVSFTALS---------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ccceeeecCCcccccccc---------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 2379999998743211 112357788999998875 56899999999999999994 7999987654322
Q ss_pred hhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 008898 460 ESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQ 521 (549)
Q Consensus 460 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~ 521 (549)
. ..+.. . ........ ...+.+++..||..+|.+|||+.+|++.|.
T Consensus 230 ~--~~~~~----~-------~~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 K--ERFYE----K-------KHRLPEPS----CKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H--HHHHH----h-------ccCCCCCC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 11110 0 00111111 234778899999999999999999998763
No 331
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.4e-35 Score=292.42 Aligned_cols=249 Identities=21% Similarity=0.268 Sum_probs=192.6
Q ss_pred HHhhhcCCCCCceE--cccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeE
Q 008898 247 LCHLTHNFSPKMLI--GQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 247 l~~~~~~f~~~~~l--G~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 322 (549)
.....++|.+.+.+ |+|+||.||++.. .+++.+|+|.+........ |+.+...+ +||||+++++.+..++.+
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 33445667777666 9999999999976 5688999999875432221 22222222 799999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
+++|||+ +|+|.+++.. +++.....++.||++||.|||+. +++||||||+||+++.+.+.++|+|||++....
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 9999999 6899999855 68888999999999999999999 999999999999999984389999999986533
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
.. ....|++.|+|||++.+..++.++|||||||++|||++|+.||............+.... ..
T Consensus 162 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~----- 225 (267)
T PHA03390 162 TP---------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--QK----- 225 (267)
T ss_pred CC---------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--cc-----
Confidence 21 134688999999999988999999999999999999999999985443321222222111 00
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHhcCCchhhh
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT-MKTLLKLFQEPDYWLK 528 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-~~evl~~L~~~~~w~~ 528 (549)
.. .........+.+++..||+.+|.+||+ ++++++ |+||+
T Consensus 226 -~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~-----h~~~~ 266 (267)
T PHA03390 226 -KL----PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK-----HPFLK 266 (267)
T ss_pred -cC----CcccccCHHHHHHHHHHhccChhhCCchHHHHhc-----CCccc
Confidence 00 111234456778889999999999995 799998 89986
No 332
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.5e-35 Score=295.76 Aligned_cols=259 Identities=22% Similarity=0.321 Sum_probs=199.9
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
|...+.||.|++|.||++.. .+|+.+++|.++..... ...+.+|+.+++.++|+||+++++++..++..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56677899999999999977 46899999998755433 356788999999999999999999999999999999999
Q ss_pred CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 ~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
.++|.+++.. +++..+..++.|+++||.|||+. +|+|+||||+||+++.+ +.++|+|||.+.......
T Consensus 81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~-~~~~l~df~~~~~~~~~~---- 152 (283)
T cd05118 81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTE-GVLKLADFGLARSFGSPV---- 152 (283)
T ss_pred CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCC-CcEEEeeeeeeEecCCCc----
Confidence 9999888844 57788899999999999999999 99999999999999988 689999999986554322
Q ss_pred CccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--cccccccC--
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS--GLCERLID-- 480 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~~d-- 480 (549)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||........ +.......... .....+.+
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCchHhcccchhhh
Confidence 111234578899999998876 789999999999999999999999976543221 11111111000 00000000
Q ss_pred -------Cc----ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 481 -------PQ----LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 481 -------~~----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+. ............+.+++..||..||.+||++.+++. |+|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~-----~~~~ 283 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA-----HPYF 283 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh-----CCCC
Confidence 00 001112234567889999999999999999999998 7885
No 333
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.2e-36 Score=312.30 Aligned_cols=255 Identities=27% Similarity=0.386 Sum_probs=209.6
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCH---HHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSE---EEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
...|.+.+.||+|.|++|.++.+ .+|..||||.+.++..+. ..+.+|+++|..|+|||||+++.+.+....+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 45688999999999999999987 569999999998765433 45789999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~ 402 (549)
||+ +|.+++|+.. ........++.|+..|++|||++ .|+|||||++||||+.+. ++||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~m-nikIaDfgfS~~~~~--- 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENM-NIKIADFGFSTFFDY--- 207 (596)
T ss_pred EeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhccccccc-ceeeeccccceeecc---
Confidence 999 8899999964 44567778999999999999999 999999999999999995 799999999876543
Q ss_pred cccCccccccccCCccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 403 VSENVKPVNVVGTFGYLAPEYMMYGKV-DEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 403 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.....+++|++.|.|||++++.+| ++.+|+||+|++||-|++|..||+...-- .+-++
T Consensus 208 ---~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk------------------~Lr~r 266 (596)
T KOG0586|consen 208 ---GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK------------------ELRPR 266 (596)
T ss_pred ---cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc------------------cccch
Confidence 344557899999999999999988 58999999999999999999999865421 11111
Q ss_pred cccccCCH--HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHHHHh
Q 008898 482 QLNEEYNR--EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEELLN 538 (549)
Q Consensus 482 ~l~~~~~~--~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~~~~ 538 (549)
.+.+.+.. -......++++++|-.+|.+|++++++.+ |+|+....+.+++..
T Consensus 267 vl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~-----~~W~n~~~~~~~l~p 320 (596)
T KOG0586|consen 267 VLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK-----DRWRNDLLEARLLAP 320 (596)
T ss_pred heeeeecccceeechhHHHHHHhhccCccccCCHHHhhh-----hcccchhhhhhhhhc
Confidence 12111111 11123445678899999999999999999 899988888744443
No 334
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.5e-35 Score=295.89 Aligned_cols=246 Identities=25% Similarity=0.318 Sum_probs=193.0
Q ss_pred EcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 260 IGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 260 lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
||+|+||.||++.. .+|+.+|+|.+..... ....+..|+++++.++||||+++++++...+.++++|||+ +++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999976 5689999999865321 2334678999999999999999999999999999999999 5799
Q ss_pred HHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcc
Q 008898 334 KQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVK 408 (549)
Q Consensus 334 ~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~ 408 (549)
.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++++ +.++|+|||++..... ...
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~-~~~~l~dfg~~~~~~~------~~~ 150 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDH-GNVRISDLGLAVELKG------GKK 150 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCC-CCEEEccCcchhhhcc------CCc
Confidence 988843 56777888999999999999999 99999999999999998 6899999999865432 111
Q ss_pred ccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCC
Q 008898 409 PVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYN 488 (549)
Q Consensus 409 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 488 (549)
.....++..|+|||++.++.++.++|||||||++|+|++|+.||.......... ....... . . ...++
T Consensus 151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~-----~--~----~~~~~ 218 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE-ELKRRTL-----E--M----AVEYP 218 (277)
T ss_pred cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH-HHHhccc-----c--c----cccCC
Confidence 223467889999999998889999999999999999999999997654321111 1010000 0 0 01112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhH
Q 008898 489 REEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 489 ~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~ 532 (549)
......+.+++..||+.||.+|| ++.++++ |+|++.-+.
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~-----h~~~~~~~~ 262 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE-----HPLFKDLNW 262 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh-----ChhhhcCCh
Confidence 22345677888999999999999 7777887 899976554
No 335
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.7e-35 Score=296.37 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=200.7
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
.|...+.||+|++|.||++.. .+++.+++|.++..... .+.+.+|+.+++.++||||+++++++...+..++++||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 455567899999999999976 56889999998654332 345789999999999999999999999999999999999
Q ss_pred CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 330 NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 330 ~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
+++|.+++.. +++.....++.|++.||.|||+. +|+||||+|+||+++.+ +.++|+|||++...... ..
T Consensus 100 ~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~-~~~~l~d~g~~~~~~~~-----~~ 170 (285)
T cd06648 100 GGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSD-GRVKLSDFGFCAQVSKE-----VP 170 (285)
T ss_pred CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCC-CcEEEcccccchhhccC-----Cc
Confidence 6799999865 66778889999999999999999 99999999999999998 68999999987543221 11
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
......|++.|+|||.+.+..++.++|||||||++|+|++|+.||........ ....... . .+....
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~-----~~~~~~~-~-----~~~~~~-- 237 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA-----MKRIRDN-L-----PPKLKN-- 237 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH-----HHHHHhc-C-----CCCCcc--
Confidence 12235689999999999988899999999999999999999999975432111 1111111 0 011110
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
.......+.+++.+||..+|.+||++.++++ |+|++....
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~-----~~~~~~~~~ 277 (285)
T cd06648 238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLN-----HPFLAKAGP 277 (285)
T ss_pred cccCCHHHHHHHHHHcccChhhCcCHHHHcc-----CcccccCCC
Confidence 1123456888999999999999999999998 899876553
No 336
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7.6e-36 Score=303.85 Aligned_cols=267 Identities=21% Similarity=0.264 Sum_probs=197.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC-------
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSK------- 319 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------- 319 (549)
.++|...+.||+|+||.||++.. .+++.+|+|++..... ....+.+|+++++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46899999999999999999987 4689999999865432 224567899999999999999999877433
Q ss_pred -CeEEEEEeccCCCHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 320 -EMYAIVYNLLNGSLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 320 -~~~~lv~e~~~gsL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
..++++++|+.++|...+. .+++.....++.|+++||.|||+. +|+|+||||+||+++++ +.++|+|||++
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~-~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQ-GILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC-CCEEECcCccc
Confidence 3579999999988888774 377888899999999999999999 99999999999999998 69999999998
Q ss_pred ccccccccccc------CccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHH
Q 008898 395 MVHHQSHQVSE------NVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWAR 467 (549)
Q Consensus 395 ~~~~~~~~~~~------~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~ 467 (549)
........... ........|++.|+|||.+.+. .++.++|||||||++|||++|++||........ ......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~-~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ-LHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH
Confidence 65433211111 1122345678999999988754 578999999999999999999999976544221 111111
Q ss_pred Hhhcc--------ccccc----ccCCcccccC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 468 SLLSS--------GLCER----LIDPQLNEEY---NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 468 ~~~~~--------~~~~~----~~d~~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..... ..+.. .......... .......+.+++..|+..||.+|||+.+++. |+||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~-----~~~f 311 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE-----HPYF 311 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc-----CCCC
Confidence 00000 00000 0000000000 0112256788999999999999999999998 7886
No 337
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.4e-35 Score=299.34 Aligned_cols=263 Identities=27% Similarity=0.372 Sum_probs=198.7
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC-----
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKE----- 320 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 320 (549)
..++|++.+.||+|+||.||+|.+ .+|+.+|+|.++.... ....+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 456899999999999999999987 4689999999975432 2346778999999999999999999887654
Q ss_pred -----eEEEEEeccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeee
Q 008898 321 -----MYAIVYNLLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDF 391 (549)
Q Consensus 321 -----~~~lv~e~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DF 391 (549)
.+++++||+.++|..++.. +++.....++.||+.||.|||+. +|+|+||||+||+++++ +.+||+||
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~-~~~kl~df 160 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNK-GQIKLADF 160 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC-CcEEeCcc
Confidence 7999999999888888753 67888999999999999999999 99999999999999998 68999999
Q ss_pred ccccccccccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh
Q 008898 392 GAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL 470 (549)
Q Consensus 392 Gla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~ 470 (549)
|++........ .......+++.|+|||.+.+. .++.++|||||||++|||++|++||..... .+.+..+.....
T Consensus 161 g~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~ 235 (302)
T cd07864 161 GLARLYNSEES----RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCG 235 (302)
T ss_pred cccccccCCcc----cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhC
Confidence 99865433211 111223467889999988654 578999999999999999999999976543 222222222111
Q ss_pred cccc--ccccc--------CC------cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 471 SSGL--CERLI--------DP------QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 471 ~~~~--~~~~~--------d~------~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
.... ...+. ++ ..... ....+..+.+++..||..||.+||++.++++ |+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~-----~~~~ 302 (302)
T cd07864 236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN-----SPWL 302 (302)
T ss_pred CCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc-----CCCC
Confidence 1000 00000 00 00000 0112456889999999999999999999998 7775
No 338
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.7e-35 Score=299.12 Aligned_cols=246 Identities=28% Similarity=0.428 Sum_probs=195.5
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
|...+.||+|+||.||+|.. .+|+.+++|.+...... ...+.+|+++++.++|||++++++++.+.+..+++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66667899999999999976 56889999998754321 24577899999999999999999999999999999999
Q ss_pred cCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+.|+|.+++.. +++.+...++.||+.||.|||+. +++|+||+|+||+++.+ +.++|+|||++....
T Consensus 103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~-~~~kL~dfg~~~~~~------ 172 (313)
T cd06633 103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEP-GQVKLADFGSASKSS------ 172 (313)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCC-CCEEEeecCCCcccC------
Confidence 99998888743 67788888999999999999999 99999999999999988 689999999874321
Q ss_pred cCccccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 405 ENVKPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
......|+..|+|||++. .+.++.++|||||||++|+|++|..||.......... ...... . +
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~-----~~~~~~-~-----~ 238 (313)
T cd06633 173 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-----HIAQND-S-----P 238 (313)
T ss_pred ---CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH-----HHHhcC-C-----C
Confidence 112456889999999984 4568899999999999999999999987654321111 111000 0 1
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
.. ........+.+++.+||+.+|.+||++.+++. |+|+....
T Consensus 239 ~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~-----~~~~~~~~ 280 (313)
T cd06633 239 TL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLR-----HDFVRRDR 280 (313)
T ss_pred CC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc-----CcccCCCc
Confidence 11 11122345788899999999999999999998 88986544
No 339
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.2e-35 Score=295.01 Aligned_cols=247 Identities=23% Similarity=0.345 Sum_probs=188.7
Q ss_pred CCCCceEcccCceEEEEEEec----CCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCC------
Q 008898 254 FSPKMLIGQGGNSKVYRTNHV----DGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKE------ 320 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~----~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------ 320 (549)
|.+.+.||+|+||.||+|... +++.+|||+++..... .+++.+|+.+++.++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566788999999999999642 3689999999764322 346788999999999999999999885432
Q ss_pred eEEEEEecc-CCCHHHHHH---------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEee
Q 008898 321 MYAIVYNLL-NGSLKQYLK---------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSD 390 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~---------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~D 390 (549)
..+++++|+ +|+|.+++. .+++.....++.|++.||.|||+. +|+||||||+||+++.+ +.++|+|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~-~~~kl~d 156 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNEN-MTVCVAD 156 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCC-CCEEECc
Confidence 346778888 689988863 246677889999999999999999 99999999999999988 6899999
Q ss_pred eccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHh
Q 008898 391 FGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSL 469 (549)
Q Consensus 391 FGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~ 469 (549)
||++.......... ......+++.|++||.+....++.++|||||||++|||++ |++||...... .+.. ..
T Consensus 157 fg~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~---~~ 228 (273)
T cd05074 157 FGLSKKIYSGDYYR---QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYN---YL 228 (273)
T ss_pred ccccccccCCccee---cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHH---HH
Confidence 99986543221111 1122345678999999998889999999999999999999 88888654321 1111 11
Q ss_pred hcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 470 LSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 470 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
..... .. .+......+.+++..|++.+|.+||++.++++.|++
T Consensus 229 ~~~~~------~~----~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 229 IKGNR------LK----QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HcCCc------CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11111 00 112234578889999999999999999999998875
No 340
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.2e-35 Score=286.91 Aligned_cols=243 Identities=32% Similarity=0.447 Sum_probs=197.3
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEeccC
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLLN 330 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 330 (549)
+|...+.||+|+||.||++.. .+++.+++|++..... ....+.+|+++++.++|+|++++++++..++..++++||+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 477788999999999999987 4689999999976543 44678899999999999999999999999999999999995
Q ss_pred -CCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 -GSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 -gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
++|.+++.. +++.....++.|+++||.|||.. +++|+||+|+||+++++ +.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSD-GEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccC-CeEEEeecccccccccccc---
Confidence 799999854 57888889999999999999998 99999999999999998 6899999999865443211
Q ss_pred CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
.....|+..|+|||.+.+..++.++|+||||+++|+|++|+.||........... .. ........+
T Consensus 154 ---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~-----~~~~~~~~~----- 219 (253)
T cd05122 154 ---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK-IA-----TNGPPGLRN----- 219 (253)
T ss_pred ---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH-HH-----hcCCCCcCc-----
Confidence 2345788999999999988899999999999999999999999976543221111 00 011111111
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.......+.+++..|+..||.+|||+.++++
T Consensus 220 --~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 --PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1112456888999999999999999999998
No 341
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=305.50 Aligned_cols=267 Identities=25% Similarity=0.305 Sum_probs=208.2
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
+.|+.-++||+||||.||-+.. .+|+.||+|.+.+... .+.-.+.|-.||.+++.++||.+--.|++.+.+++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 5688889999999999999976 6799999998864432 2334678999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 327 NLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 327 e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
..| +|+|.-+|.+ +++..+..++.+|+.||++||+. +|++||+||+|||||+. |+++|+|.|+|.....
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~-GhvRISDLGLAvei~~- 339 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDH-GHVRISDLGLAVEIPE- 339 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccC-CCeEeeccceEEecCC-
Confidence 999 6788777744 67788889999999999999999 99999999999999999 8999999999976544
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
.......+||.+|||||++.++.|+...|+|||||+||||+.|+.||....+-... ........ -|
T Consensus 340 -----g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~-eEvdrr~~--------~~ 405 (591)
T KOG0986|consen 340 -----GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR-EEVDRRTL--------ED 405 (591)
T ss_pred -----CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH-HHHHHHHh--------cc
Confidence 23333458999999999999999999999999999999999999999876542111 01111111 11
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhcCCchhhhhhhHHH-HHHhhccCCCC
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTM-----KTLLKLFQEPDYWLKMKREKE-ELLNERRSNGP 545 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~L~~~~~w~~~~~~~~-~~~~~~~~~~~ 545 (549)
...|+....+....+.+..|..||.+|..- .++-+ |++|+..+... +.....+++-|
T Consensus 406 ---~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~-----HpfFk~lnw~rleagml~PPfiP 468 (591)
T KOG0986|consen 406 ---PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKE-----HPFFKDLNWRRLEAGMLEPPFIP 468 (591)
T ss_pred ---hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhh-----CcccccCCHhHHhccCCCCCCCC
Confidence 133445555666677788999999999754 46655 67777665443 33334444444
No 342
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4e-36 Score=331.40 Aligned_cols=251 Identities=28% Similarity=0.419 Sum_probs=187.9
Q ss_pred HhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC--cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC-----
Q 008898 248 CHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN--WSEEEVLREVELLSSIKHENIVRIIGYCHSK----- 319 (549)
Q Consensus 248 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~----- 319 (549)
.+..++|+...+||+||||.||++++ -||+.||||.+.... .....+.+|+..|++|+|||||+++..|.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 34567899999999999999999987 699999999997653 2335688999999999999999976422000
Q ss_pred --------------------------------------------------------------------------------
Q 008898 320 -------------------------------------------------------------------------------- 319 (549)
Q Consensus 320 -------------------------------------------------------------------------------- 319 (549)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeEEEEEeccCCC-HHHHHHH--h--chhHHHHHHHHHHHHHHHHH
Q 008898 320 ----------------------------------EMYAIVYNLLNGS-LKQYLKQ--L--KWNERMDVAIGVAKALEYLH 360 (549)
Q Consensus 320 ----------------------------------~~~~lv~e~~~gs-L~~~l~~--~--~~~~~~~i~~~i~~aL~yLH 360 (549)
..+||.||||..+ |.+++.+ + .....++++.+|++||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 1367889999655 4444543 2 25667899999999999999
Q ss_pred hCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc----c---------ccccccCccccccccCCccccccccccC
Q 008898 361 HTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH----Q---------SHQVSENVKPVNVVGTFGYLAPEYMMYG 427 (549)
Q Consensus 361 ~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~----~---------~~~~~~~~~~~~~~gt~~y~APE~~~~~ 427 (549)
+. |||||||||.|||++++ ..+||+|||+|.... . ..........+..+||.-|+|||++.+.
T Consensus 715 ~~---giIHRDLKP~NIFLd~~-~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSR-NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred hC---ceeeccCCcceeEEcCC-CCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 99 99999999999999988 689999999997622 0 0111222244577999999999998755
Q ss_pred ---CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc--CCHHHHHHHHHHHHHh
Q 008898 428 ---KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE--YNREEIEIVMCAARLC 502 (549)
Q Consensus 428 ---~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~l~~li~~C 502 (549)
.|+.|+|+|||||||+||+. ||....+.... +..+.++.++.+ +..+....-..+|++|
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~i-------------L~~LR~g~iP~~~~f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASI-------------LTNLRKGSIPEPADFFDPEHPEEASLIRWL 854 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHHHHHH-------------HHhcccCCCCCCcccccccchHHHHHHHHH
Confidence 49999999999999999984 56554432221 122223333332 2222233345688999
Q ss_pred cccCCCCCCCHHHHHH
Q 008898 503 LLHSSSRRPTMKTLLK 518 (549)
Q Consensus 503 l~~dP~~RPs~~evl~ 518 (549)
+++||.+|||+.|+|.
T Consensus 855 l~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLN 870 (1351)
T ss_pred hcCCCccCCCHHHHhh
Confidence 9999999999999998
No 343
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.9e-35 Score=298.44 Aligned_cols=267 Identities=22% Similarity=0.276 Sum_probs=192.9
Q ss_pred eEcccCceEEEEEEecCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHH
Q 008898 259 LIGQGGNSKVYRTNHVDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLK 334 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~ 334 (549)
.+|.|+++.||++.. +++.+|+|+++.... ....+.+|+.+++.++||||+++++++.+++.++++|||+ +|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 345555555555544 689999999976532 2356889999999999999999999999999999999999 57899
Q ss_pred HHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc--ccCc
Q 008898 335 QYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV--SENV 407 (549)
Q Consensus 335 ~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~--~~~~ 407 (549)
+++.. +++.....++.|+++||.|||+. +|+||||||+||+++.+ +.++|+|||.+......... ....
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGD-GKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecC-CceEEecCccceeecccccccccccc
Confidence 98864 56677788999999999999999 99999999999999988 68999999988644322111 1111
Q ss_pred cccccccCCcccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHh---hcccc-------c
Q 008898 408 KPVNVVGTFGYLAPEYMMY--GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSL---LSSGL-------C 475 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~---~~~~~-------~ 475 (549)
......++..|+|||++.. ..++.++|+|||||++|||++|..||.........+....... ..... .
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSM 243 (314)
T ss_pred ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCc
Confidence 2234567889999999876 3588999999999999999999999986543222111110000 00000 0
Q ss_pred cc----ccCCc----ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHH
Q 008898 476 ER----LIDPQ----LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEE 535 (549)
Q Consensus 476 ~~----~~d~~----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~ 535 (549)
.. ..++. ....+.......+.+++..||..||.+|||++++++ |+||+...+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~-----~p~~~~~~~~~~ 306 (314)
T cd08216 244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN-----HSFFKQCKRRNT 306 (314)
T ss_pred CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc-----CchHhhhcccch
Confidence 00 00010 011112233456788999999999999999999999 899987654433
No 344
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.4e-35 Score=305.38 Aligned_cols=269 Identities=23% Similarity=0.302 Sum_probs=204.3
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC-----eEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSKE-----MYA 323 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~~ 323 (549)
+|.+.+.||.|+||.||++... +++.+|+|.+.... ...+.+.+|+.+++.++||||+++++++...+ .++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999874 58999999987543 23356889999999999999999999987765 789
Q ss_pred EEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 324 IVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 324 lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
++|+|+.++|.+++.. +++.....++.||+.||.|||+. +|+|+||||+|||++.+ +.++|+|||++......
T Consensus 81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~-~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSN-CDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC-CCEEEcccCceEeeccc
Confidence 9999999899998854 67888899999999999999999 99999999999999999 79999999998765432
Q ss_pred cccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc--------
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS-------- 471 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~-------- 471 (549)
... ........+|+.|+|||.+.+. .++.++|+||||+++|+|++|.+||........ ..........
T Consensus 157 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 157 EDE--KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred ccc--cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHhcCCCChhHhhh
Confidence 110 1112344678999999999887 789999999999999999999999976653211 1110100000
Q ss_pred --ccccccccC---Ccc---cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 472 --SGLCERLID---PQL---NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 472 --~~~~~~~~d---~~l---~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
.......+. ... ...........+.+++..||..+|.+|||+.++++ |+||.....+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~-----~~~~~~~~~~ 298 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA-----HPYLAQLHDP 298 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh-----CccHHhhccc
Confidence 000000000 000 00011123456788999999999999999999998 8999765554
No 345
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.7e-35 Score=306.94 Aligned_cols=270 Identities=18% Similarity=0.238 Sum_probs=198.5
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcC---------
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSK--------- 319 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--------- 319 (549)
..+|...+.||.|+||.||+|.. .+|+.+|+|.+..... ..+.+.+|+++++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 46899999999999999999977 5689999999875543 235688999999999999999998766443
Q ss_pred -----CeEEEEEeccCCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeec
Q 008898 320 -----EMYAIVYNLLNGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFG 392 (549)
Q Consensus 320 -----~~~~lv~e~~~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFG 392 (549)
..++++|||+.++|.+++.. +++.....++.||++||.|||+. +|+||||||+||+++.+.+.++|+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 84 SLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred cccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCcc
Confidence 36889999999999988854 67888889999999999999999 999999999999998654578999999
Q ss_pred cccccccccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHH-hh
Q 008898 393 AAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARS-LL 470 (549)
Q Consensus 393 la~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~-~~ 470 (549)
++......... ........|+..|+|||.+.. ..++.++|||||||++|+|++|+.||................ ..
T Consensus 161 ~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 161 LARIVDPHYSH--KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cceecCCcccc--ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 98654332111 111123457889999998764 457899999999999999999999997654322211110000 00
Q ss_pred ccccc--------cccc----CCcc-cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 471 SSGLC--------ERLI----DPQL-NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 471 ~~~~~--------~~~~----d~~l-~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
..... .... .+.. ...........+.+++..||..||.+|||+.++++ |+|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~-----h~~~~~~ 306 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM-----HPYMSCY 306 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC-----CCccccc
Confidence 00000 0000 0000 00001122345778999999999999999999998 8999743
No 346
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.5e-35 Score=303.17 Aligned_cols=267 Identities=20% Similarity=0.251 Sum_probs=195.7
Q ss_pred CCCCCceEcccCceEEEEEEec-C--CcEEEEEEeecCCc---CHHHHHHHHHHHhcC-CCCCeeeEEEEEEc----CCe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-D--GQVAAVKVLKCTNW---SEEEVLREVELLSSI-KHENIVRIIGYCHS----KEM 321 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~--g~~~AvK~l~~~~~---~~~~~~~E~~il~~l-~h~nIv~l~~~~~~----~~~ 321 (549)
+|...+.||+|+||.||++... + +..+|+|.+..... ....+.+|+.+++.+ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999763 4 78999999864321 235678899999999 59999999987532 246
Q ss_pred EEEEEeccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 322 YAIVYNLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
+++++++++++|.+++.. +++.....++.||+.||.|||+. +|+||||||+|||++.+ +.++|+|||++....
T Consensus 81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~-~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNAD-CELKICDFGLARGFS 156 (332)
T ss_pred EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCC-CCEEeCcCCCceecc
Confidence 789999999999998853 67788899999999999999999 99999999999999998 689999999997544
Q ss_pred cccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc--cccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS--SGLC 475 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~--~~~~ 475 (549)
..... .........||+.|+|||.+.+ ..++.++|||||||++|+|++|.+||....... .+......+.. ....
T Consensus 157 ~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 157 ENPGE-NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccc-ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 32211 1112234578999999998765 468999999999999999999999997644211 11100000000 0000
Q ss_pred c---------------cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 476 E---------------RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 476 ~---------------~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
. ......+. .........+.+++.+|++.||.+|||+.++++ |+|+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~-----~~~~~~~~ 299 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALE-----HPYLAIWH 299 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc-----Chhhhhhc
Confidence 0 00000000 001112356788999999999999999999998 89986443
No 347
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-37 Score=288.55 Aligned_cols=264 Identities=28% Similarity=0.325 Sum_probs=202.0
Q ss_pred ccccCHHHHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc--CHHHHHHHHHH-HhcCCCCCeeeEEE
Q 008898 239 SRRFTSQELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW--SEEEVLREVEL-LSSIKHENIVRIIG 314 (549)
Q Consensus 239 ~~~~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~--~~~~~~~E~~i-l~~l~h~nIv~l~~ 314 (549)
.-.|+.++|.. +..||.|+||.|++-.+ ..|+..|||.+..... +..++..|.+. ++.-+.||||++||
T Consensus 58 ~~~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG 130 (361)
T KOG1006|consen 58 LHTFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG 130 (361)
T ss_pred ccccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence 34455555443 34599999999999977 5699999999987654 34567888885 45557999999999
Q ss_pred EEEcCCeEEEEEeccCCCHHHHHHH--------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCce
Q 008898 315 YCHSKEMYAIVYNLLNGSLKQYLKQ--------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHP 386 (549)
Q Consensus 315 ~~~~~~~~~lv~e~~~gsL~~~l~~--------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~ 386 (549)
.+..++..++.||+|.-||+.+.+. +++.-.-.|......||.||.+.. .|||||+||+|||++.. |.+
T Consensus 131 a~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~-G~v 207 (361)
T KOG1006|consen 131 ALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRH-GDV 207 (361)
T ss_pred hhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecC-CCE
Confidence 9999999999999999998777632 555555667778889999999875 89999999999999999 799
Q ss_pred EEeeeccccccccccccccCccccccccCCccccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHH
Q 008898 387 QLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMM--YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVL 464 (549)
Q Consensus 387 kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~--~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~ 464 (549)
||||||.+-.. ..+...+.-+|...|||||.+. ..+|+-++||||||++|||+.||+.|+......-+++.+
T Consensus 208 KLCDFGIcGqL------v~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~ 281 (361)
T KOG1006|consen 208 KLCDFGICGQL------VDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQ 281 (361)
T ss_pred eeecccchHhH------HHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHH
Confidence 99999997432 2333344557889999999986 346999999999999999999999999887664444443
Q ss_pred HHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 465 WARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 465 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
.+ .+....+..+.- .-+....+..++..|+.+|-..||.+.++++ +++.+++..
T Consensus 282 Vv-----~gdpp~l~~~~~----~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~-----~~fyr~y~~ 335 (361)
T KOG1006|consen 282 VV-----IGDPPILLFDKE----CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK-----FPFYRMYAV 335 (361)
T ss_pred HH-----cCCCCeecCccc----ccccCHHHHHHHHHHhhcccccCcchhhhhc-----Cchhhhhhh
Confidence 22 122222211111 1223456777889999999999999999998 577766654
No 348
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-37 Score=323.10 Aligned_cols=244 Identities=23% Similarity=0.398 Sum_probs=202.4
Q ss_pred CCceEcccCceEEEEEEec-C---CcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 256 PKMLIGQGGNSKVYRTNHV-D---GQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~~-~---g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
++++||.|.||.||+|.++ . ...||||.+|..... ..+|+.|..||.++.||||++|.|+.......+|+.|||
T Consensus 633 Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyM 712 (996)
T KOG0196|consen 633 IEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYM 712 (996)
T ss_pred EEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhh
Confidence 5678999999999999763 2 358999999865433 357999999999999999999999999999999999999
Q ss_pred -CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 -NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 -~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+|+|+.||++ +.+.+...+..+|+.|+.||-++ +++||||...|||++.+. ..|++|||++++..+..
T Consensus 713 ENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnL-vCKVsDFGLSRvledd~--- 785 (996)
T KOG0196|consen 713 ENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDP--- 785 (996)
T ss_pred hCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhhheeeccce-EEEeccccceeecccCC---
Confidence 9999999975 78888899999999999999999 999999999999999995 89999999998764422
Q ss_pred cCcccccccc--CCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 405 ENVKPVNVVG--TFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 405 ~~~~~~~~~g--t~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.....+.-| ..+|.|||.+.+.+++.++||||||++|||.++ |.+|+=.... ++-+ .-+..
T Consensus 786 -~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-QdVI--------------kaIe~ 849 (996)
T KOG0196|consen 786 -EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVI--------------KAIEQ 849 (996)
T ss_pred -CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-HHHH--------------HHHHh
Confidence 111112112 468999999999999999999999999999887 8888755443 2211 11223
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
.+.-+.+.+++..|.+|+..||++|-.+||.+.+|+..|++
T Consensus 850 gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 850 GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 33344567889999999999999999999999999998754
No 349
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=9e-35 Score=292.46 Aligned_cols=249 Identities=26% Similarity=0.356 Sum_probs=190.6
Q ss_pred eEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHH---HHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 259 LIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREV---ELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~---~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
+||+|+||.||++.+ .+++.+|+|.+...... ...+..|. ..++...||||+.+++++...+.++++|||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999977 56899999998754321 11233343 3455568999999999999999999999999
Q ss_pred CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 330 NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 330 ~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
+|+|.+++.. +++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.++|+|||++......
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~-~~~kl~dfg~~~~~~~~------ 150 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEH-GHVRISDLGLACDFSKK------ 150 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCC-CCEEEccCcCccccCcc------
Confidence 6789888854 67888999999999999999999 99999999999999998 68999999998643221
Q ss_pred ccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNE 485 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 485 (549)
......|+..|+|||.+.++ .++.++|||||||++|||++|+.||........... .... ....+.+..
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~--~~~~-------~~~~~~~~~ 220 (278)
T cd05606 151 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--DRMT-------LTMAVELPD 220 (278)
T ss_pred -CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH--HHHh-------hccCCCCCC
Confidence 11244789999999998754 589999999999999999999999976533211110 0000 001122222
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHHHH
Q 008898 486 EYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKEEL 536 (549)
Q Consensus 486 ~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~~~ 536 (549)
. ....+.+++..|+..+|.+|| ++.++++ |+|++.......-
T Consensus 221 ~----~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~-----~~~~~~~~~~~~~ 267 (278)
T cd05606 221 S----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE-----HPFFRSLDWQMVF 267 (278)
T ss_pred c----CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh-----CccccCCCchHhh
Confidence 2 245677888999999999999 9999998 8999776544443
No 350
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.7e-35 Score=287.60 Aligned_cols=246 Identities=28% Similarity=0.412 Sum_probs=199.5
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|...+.||.|+||.||++.. .+++.+++|++..... ....+.+|+++++.++|||++++++.+..++..++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 477888999999999999987 4689999999976543 335688999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 329 L-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 329 ~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+ +++|.+++.. +++.....++.+++.||.|||+. +++|+||+|+||+++++ +.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSN-GLVKLGDFGISKVLSST 156 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCC-CcEEECCccceeecccC
Confidence 9 5689998854 56778899999999999999999 99999999999999988 68999999998654332
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
. .......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||....... ........ ..
T Consensus 157 ~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~~~-~~----- 220 (258)
T cd08215 157 V-----DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-----LALKILKG-QY----- 220 (258)
T ss_pred c-----ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-----HHHHHhcC-CC-----
Confidence 1 12234578999999999998889999999999999999999999997654221 11111111 11
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+ ..+......+.+++..||..+|++|||+.++++ ++||
T Consensus 221 ~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~-----~~~~ 258 (258)
T cd08215 221 P----PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ-----SPFI 258 (258)
T ss_pred C----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc-----CCCC
Confidence 1 112233456788899999999999999999998 6775
No 351
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-34 Score=292.21 Aligned_cols=259 Identities=27% Similarity=0.372 Sum_probs=200.8
Q ss_pred CCCCCceEcccCceEEEEEEe----cCCcEEEEEEeecCCc-----CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH----VDGQVAAVKVLKCTNW-----SEEEVLREVELLSSI-KHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~~AvK~l~~~~~-----~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 322 (549)
+|+..+.||+|+||.||++.. .+|+.+|+|+++.... ..+.+.+|+.+++.+ +|+||+++++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477888999999999999975 3688999999975321 235577899999999 599999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
++++||+ +|+|.+++.. +.+.....++.|+++||.|||+. +++||||+|+|||++.+ +.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSN-GHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCC-CCEEEeeCccceecc
Confidence 9999999 6799999864 66777788888999999999998 99999999999999998 689999999986543
Q ss_pred cccccccCccccccccCCccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYG--KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
... ........|+..|+|||.+... .++.++||||||+++|+|++|..||...... .....+........
T Consensus 157 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~~--- 228 (290)
T cd05613 157 EDE----VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSE--- 228 (290)
T ss_pred ccc----ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHHHhhccC---
Confidence 211 1112245689999999998753 4688999999999999999999999753321 11112222211110
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcCCchhhhhhhHHHHH
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRP-----TMKTLLKLFQEPDYWLKMKREKEEL 536 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~~L~~~~~w~~~~~~~~~~ 536 (549)
+ .++......+.+++..|+..||.+|| ++.+++. |+||.....++..
T Consensus 229 ----~----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~-----~~~~~~~~~~~~~ 280 (290)
T cd05613 229 ----P----PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK-----HPFFQKINWDDLA 280 (290)
T ss_pred ----C----CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc-----CcccccCCHHHHh
Confidence 1 11223345678889999999999997 8888888 8898877765543
No 352
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8.5e-35 Score=292.31 Aligned_cols=259 Identities=20% Similarity=0.292 Sum_probs=195.3
Q ss_pred CCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCc--CHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEEecc
Q 008898 254 FSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW--SEEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
|.+.+.||+|+||.||+|... +++.+++|.+..... ......+|+..++.++ ||||+++++++..++..+++|||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567788999999999999874 588999999875433 2234567999999999 999999999999999999999999
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+|+|.+++.. +++..+..++.|++.||.|||++ +++|+||+|+||+++++ +.++|+|||++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~-~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGP-EVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCC-CCEEEeecccceeccCCC---
Confidence 9999988843 57788899999999999999999 99999999999999998 689999999986543211
Q ss_pred cCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHH-----------HHHHHhhcc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLV-----------LWARSLLSS 472 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~-----------~~~~~~~~~ 472 (549)
......|+..|+|||++.. ..++.++|+||||+++|||++|++||........... .|.......
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 154 ---PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred ---CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence 1223468889999998854 4578999999999999999999999976543221100 011111111
Q ss_pred cccccccCCccc---ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 473 GLCERLIDPQLN---EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 473 ~~~~~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
............ ..........+.++++.|+..||.+|||++|++. |+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~-----~~~~ 283 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ-----HPYF 283 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh-----CCCC
Confidence 111100000000 0001111466889999999999999999999998 6775
No 353
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-36 Score=327.63 Aligned_cols=273 Identities=21% Similarity=0.286 Sum_probs=210.1
Q ss_pred HHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecC----CcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC
Q 008898 246 ELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCT----NWSEEEVLREVELLSSIKHENIVRIIGYCHSKE 320 (549)
Q Consensus 246 el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 320 (549)
++..-.++|.+.++||+|+||.|..+++ .+++.||+|++++- .....-|..|-+||..-+.+-|+.|.-.|++++
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 4444567999999999999999999987 56999999999762 223355778999999999999999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHHh---chhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 321 MYAIVYNLL-NGSLKQYLKQL---KWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~~---~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
.+|+||||+ ||+|...+..+ ++..+..++..|..||.-||+. |+|||||||+|||||.+ |++||+|||.|..
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~-GHikLADFGsClk 224 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKS-GHIKLADFGSCLK 224 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEeccc-CcEeeccchhHHh
Confidence 999999999 88999999764 4566677888999999999999 99999999999999999 8999999999865
Q ss_pred cccccccccCccccccccCCccccccccc----c-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYLAPEYMM----Y-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS 471 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~APE~~~----~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~ 471 (549)
+.. .........+|||.|++||++. + +.|+..+|+||+||++|||+.|..||.... ++.....++.
T Consensus 225 m~~----dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-----lveTY~KIm~ 295 (1317)
T KOG0612|consen 225 MDA----DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-----LVETYGKIMN 295 (1317)
T ss_pred cCC----CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-----HHHHHHHHhc
Confidence 543 2233445678999999999985 3 568999999999999999999999997543 3333434433
Q ss_pred ccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHhcCCchhhhhhhHHHHHHhhccCCCC
Q 008898 472 SGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPT---MKTLLKLFQEPDYWLKMKREKEELLNERRSNGP 545 (549)
Q Consensus 472 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs---~~evl~~L~~~~~w~~~~~~~~~~~~~~~~~~~ 545 (549)
-...-.+.+. -..+.+..+.+..+ --+|..|.. +.++-. |+||....+ +-..+..++..|
T Consensus 296 hk~~l~FP~~---~~VSeeakdLI~~l-----l~~~e~RLgrngiedik~-----HpFF~g~~W-~~iR~~~pP~vP 358 (1317)
T KOG0612|consen 296 HKESLSFPDE---TDVSEEAKDLIEAL-----LCDREVRLGRNGIEDIKN-----HPFFEGIDW-DNIRESVPPVVP 358 (1317)
T ss_pred hhhhcCCCcc---cccCHHHHHHHHHH-----hcChhhhcccccHHHHHh-----CccccCCCh-hhhhhcCCCCCC
Confidence 2222222211 11333333333322 237777777 999887 899999888 555555555444
No 354
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3e-35 Score=291.50 Aligned_cols=248 Identities=26% Similarity=0.409 Sum_probs=193.9
Q ss_pred EcccCceEEEEEEec-CCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 260 IGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 260 lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
||.|+||.||++... +|+.+++|++..... ....+.+|+++++.++||||+++++.+..++.+++++|++ +++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999875 599999999975543 2346788999999999999999999999999999999999 5699
Q ss_pred HHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc---ccCc
Q 008898 334 KQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV---SENV 407 (549)
Q Consensus 334 ~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~---~~~~ 407 (549)
.+++.. +++..+..++.||++||.|||+. +++|+||+|+||+++++ +.++|+|||++......... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSN-GHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCC-CCEEEEecccchhcccCcccccccccc
Confidence 999865 67778889999999999999999 99999999999999998 68999999998643322110 0011
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
......+++.|+|||.+....++.++||||||+++|+|++|..||....... . ...... +.. . ....
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~---~~~~~~-~~~----~--~~~~- 223 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE--I---FQNILN-GKI----E--WPED- 223 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--H---HHHHhc-CCc----C--CCcc-
Confidence 2234568889999999988889999999999999999999999997654321 1 111111 000 0 0000
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCH---HHHHHHhcCCchhhhhh
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTM---KTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~---~evl~~L~~~~~w~~~~ 530 (549)
......+.+++..|+..+|.+|||+ .++++ |+||+..
T Consensus 224 -~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~-----~~~~~~~ 263 (265)
T cd05579 224 -VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN-----HPFFKGI 263 (265)
T ss_pred -ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc-----CccccCC
Confidence 0124667888999999999999999 66665 8898754
No 355
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4e-35 Score=293.58 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=202.0
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC----cCHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN----WSEEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~----~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv 325 (549)
++|...+.||+|+||.||++.. .+|+.+|+|++.... .....+.+|.++++.+. ||||+++++++..++.++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4688899999999999999977 479999999987532 22345788999999998 99999999999999999999
Q ss_pred Eecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
||++ +++|.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~-~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKD-MHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCC-CCEEecCCccccccCCcc
Confidence 9999 8899999965 67888999999999999999999 99999999999999988 689999999987654322
Q ss_pred ccc---------------cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHH
Q 008898 402 QVS---------------ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWA 466 (549)
Q Consensus 402 ~~~---------------~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~ 466 (549)
... .........|+..|+|||.+....++.++|+||||+++++|++|+.||........ +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~---- 231 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT-F---- 231 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-H----
Confidence 110 01223355788999999999888899999999999999999999999986642111 1
Q ss_pred HHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHHhcCCchhh
Q 008898 467 RSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTM----KTLLKLFQEPDYWL 527 (549)
Q Consensus 467 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~----~evl~~L~~~~~w~ 527 (549)
..... .. ..++......+.+++..||..+|.+||++ +++++ |+||
T Consensus 232 ~~~~~-------~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~-----~~~~ 280 (280)
T cd05581 232 QKILK-------LE----YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA-----HPFF 280 (280)
T ss_pred HHHHh-------cC----CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc-----CCCC
Confidence 01000 00 11122235568889999999999999999 99988 7775
No 356
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.3e-34 Score=287.55 Aligned_cols=246 Identities=24% Similarity=0.293 Sum_probs=187.2
Q ss_pred ceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCH----HHHHHHHHH-HhcCCCCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 258 MLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSE----EEVLREVEL-LSSIKHENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~----~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+.||+|+||.||+|.. .+|+.+|+|+++...... ..+..|..+ ....+|+|++++++++..++.+++++||+ +
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4589999999999977 568999999987543211 233445544 44568999999999999999999999999 6
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|+|.++++. +++.....++.|++.||.|||+. +++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~-------- 149 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQT-GHLKLTDFGLSRNGLE-------- 149 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCC-CcEEEeecccceeccc--------
Confidence 799999864 67788889999999999999999 99999999999999988 6899999998854221
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||........ +. .... +.. ......
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~-~~~~-~~~------~~~~~~ 216 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV----FD-NILS-RRI------NWPEEV 216 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH----HH-HHHh-ccc------CCCCcc
Confidence 2244688999999999888899999999999999999999999976543211 11 1100 000 001111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
.......+.+++..||..+|.+||++.++.+.|. |+|++..
T Consensus 217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~--~~~~~~~ 257 (260)
T cd05611 217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS--HPFFKSI 257 (260)
T ss_pred cccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc--ChHhhcC
Confidence 1223456888999999999999996654433322 6888654
No 357
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.2e-35 Score=297.65 Aligned_cols=246 Identities=30% Similarity=0.417 Sum_probs=194.3
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
.|...+.||+|+||.||+|.. .++..+|+|.+..... ...++.+|+++++.++|+|++++++++...+.+++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 466677899999999999987 4688999999864321 22457789999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
|+.|+|.+++.. +++..+..++.|++.||.|||+. +++||||+|+||+++.+ +.++|+|||++.....
T Consensus 96 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~---- 167 (308)
T cd06634 96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEP-GLVKLGDFGSASIMAP---- 167 (308)
T ss_pred ccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCC-CcEEECCcccceeecC----
Confidence 999998887743 66778888999999999999999 99999999999999988 6899999999854322
Q ss_pred ccCccccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 404 SENVKPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
.....|++.|+|||.+. .+.++.++|||||||++|+|++|..||....... ....+.. +. .
T Consensus 168 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~-----~~-----~ 231 (308)
T cd06634 168 -----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQ-----NE-----S 231 (308)
T ss_pred -----cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhh-----cC-----C
Confidence 12346889999999975 3567889999999999999999999986543211 1111110 00 0
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
+.. ........+.+++.+||..+|.+||++.++++ |+|+...
T Consensus 232 ~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~-----~~~~~~~ 273 (308)
T cd06634 232 PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK-----HRFVLRE 273 (308)
T ss_pred CCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhh-----Ccccccc
Confidence 111 11233456788899999999999999999998 7886544
No 358
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.5e-34 Score=284.86 Aligned_cols=246 Identities=29% Similarity=0.450 Sum_probs=199.1
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|+..+.||+|+||.||++.. .+++.+++|.+..... ....+.+|++++++++|||++++++++.+++.++++|++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 477889999999999999976 4688999999976653 335688999999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 L-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+ +++|.+++.. +++.....++.|++.||.|||+. +|+|+||+|+||+++.+ +.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~-- 154 (254)
T cd06627 81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKD-GVVKLADFGVATKLNDVSK-- 154 (254)
T ss_pred CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCC-CCEEEeccccceecCCCcc--
Confidence 9 5689998854 78888899999999999999999 99999999999999998 6899999999865543221
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
......|+..|+|||...+..++.++||||||+++|+|++|+.||........ .+... .. ..+..
T Consensus 155 ---~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~---~~~~~---~~-----~~~~~- 219 (254)
T cd06627 155 ---DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA---LFRIV---QD-----DHPPL- 219 (254)
T ss_pred ---cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHh---cc-----CCCCC-
Confidence 12345688999999999888889999999999999999999999975542111 11111 00 01111
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+......+.+++.+||..+|++|||+.+++. ++||
T Consensus 220 ---~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~-----~~~~ 254 (254)
T cd06627 220 ---PEGISPELKDFLMQCFQKDPNLRPTAKQLLK-----HPWI 254 (254)
T ss_pred ---CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc-----CCCC
Confidence 2223456778889999999999999999997 5664
No 359
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-34 Score=286.52 Aligned_cols=240 Identities=25% Similarity=0.344 Sum_probs=196.2
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|++.+.||+|+||.||++.. .+++.+|+|.+...... ...+.+|+.+++.++|+||+++++++.++..+++++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477888999999999999976 57889999999764322 34577899999999999999999999999999999999
Q ss_pred c-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 329 L-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 329 ~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+ +++|.+++.+ +++...+.++.|++.||.|||+. +++|+||+|+||+++++ +.++|+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~-~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVAN-DLVKIGDLGISKVLKKN 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecC-CcEEEeeccchhhhccC
Confidence 9 6789999855 67778889999999999999999 99999999999999998 68999999998664432
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||....... +.. .. ..+.
T Consensus 157 -------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--~~~---~~-~~~~------ 217 (256)
T cd08530 157 -------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--LRY---KV-QRGK------ 217 (256)
T ss_pred -------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH---HH-hcCC------
Confidence 1123468889999999998889999999999999999999999997654321 111 11 0111
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
...........+.+++..|+..+|.+||++.++++
T Consensus 218 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 218 ---YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ---CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11122344566888999999999999999999997
No 360
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.8e-34 Score=287.59 Aligned_cols=246 Identities=24% Similarity=0.329 Sum_probs=191.6
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC------cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcC--CeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN------WSEEEVLREVELLSSIKHENIVRIIGYCHSK--EMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~ 322 (549)
.+|+..+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|++++++++|+||+++++++.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4788999999999999999976 568999999885431 1124577899999999999999999998654 568
Q ss_pred EEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
++++||+ +++|.+++.. +.+.....++.|++.||.|||+. +++|+||||+||+++.+ +.++|+|||++....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSA-GNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCC-CCEEECccccccccc
Confidence 8999998 6789998864 56777888999999999999999 99999999999999988 689999999986543
Q ss_pred cccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
... ..........|+..|+|||.+.+..++.++|+|||||++|+|++|+.||........ ... ..
T Consensus 158 ~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~----~~-------- 222 (264)
T cd06653 158 TIC--MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA-IFK----IA-------- 222 (264)
T ss_pred ccc--ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH-HHH----HH--------
Confidence 211 111112245689999999999988899999999999999999999999975432211 110 00
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.......++....+.+.+++..|+. +|..||+..+++.
T Consensus 223 -~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 223 -TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0011112233444667888899999 5799999999887
No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=8.5e-35 Score=291.73 Aligned_cols=258 Identities=25% Similarity=0.355 Sum_probs=197.4
Q ss_pred CCCCceEcccCceEEEEEEec-CCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 254 FSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
|+..+.||+|+||.||+|... +++.+|+|+++... ...+.+..|+.+++.++|+|++++++++.+.+.+++++|++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456678999999999999874 59999999997653 22356788999999999999999999999999999999999
Q ss_pred CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 330 NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 330 ~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
.++|.+++.+ +++..+..++.|++.||.|||+. +|+|+||+|+||+++++ +.++|+|||++........
T Consensus 81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~-~~~~l~d~g~~~~~~~~~~--- 153 (282)
T cd07829 81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRD-GVLKLADFGLARAFGIPLR--- 153 (282)
T ss_pred CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCC-CCEEEecCCcccccCCCcc---
Confidence 9999999954 57788899999999999999999 99999999999999998 6899999999865432211
Q ss_pred CccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh------------c-
Q 008898 406 NVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL------------S- 471 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~------------~- 471 (549)
......++..|+|||.+.+. .++.++|||||||++|||++|++||........ +........ .
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 154 --TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-LFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred --ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCcHHHHHhhcccc
Confidence 12233467789999998776 789999999999999999999999976543211 111000000 0
Q ss_pred --ccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 472 --SGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 472 --~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
............. ...+.....+.+++..||..||.+||++.+++. |+||
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~-----~p~~ 282 (282)
T cd07829 231 DYKPTFPKFPPKDLE-KVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK-----HPYF 282 (282)
T ss_pred cccccccccCccchH-HhcccccHHHHHHHHHhhccCcccCCCHHHHhh-----CcCC
Confidence 0000000000000 001112456889999999999999999999998 8886
No 362
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.2e-35 Score=306.13 Aligned_cols=265 Identities=23% Similarity=0.322 Sum_probs=200.6
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCe----
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEM---- 321 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~---- 321 (549)
+.++|...+.||+|+||.||+|.. .+++.+|+|++..... ....+.+|+.+++.++||||+++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 467899999999999999999987 4688999999865322 22457789999999999999999987765544
Q ss_pred --EEEEEeccCCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 322 --YAIVYNLLNGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 322 --~~lv~e~~~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
+++++||++++|.+++.. +++.....++.|+++||.|||+. +|+|+||||+||+++++ +.++|+|||++...
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~-~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNED-CELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCC-CCEEEccccccccc
Confidence 899999999999999854 77888899999999999999999 99999999999999998 68999999998643
Q ss_pred ccccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhc--ccc
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLS--SGL 474 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~--~~~ 474 (549)
... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||....... .+......... ...
T Consensus 169 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 169 DDE--------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNLVGTPDEEL 239 (343)
T ss_pred ccc--------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHH
Confidence 221 224467889999998865 367899999999999999999999997554321 11111110000 000
Q ss_pred ccc--------ccC-------CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 475 CER--------LID-------PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 475 ~~~--------~~d-------~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
... ++. +.+... .......+.+++..|+..||.+|||+.+|++ |+|+......
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~-----h~~~~~~~~~ 307 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEV-FSGANPLAIDLLEKMLVLDPDKRITAAEALA-----HPYLAEYHDP 307 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHH-hccCCHHHHHHHHHhCCCChhhCCCHHHHhc-----CCCccccCCC
Confidence 000 000 000000 0112456888999999999999999999998 8998765433
No 363
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-36 Score=289.14 Aligned_cols=271 Identities=22% Similarity=0.331 Sum_probs=203.0
Q ss_pred CHHHHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC-cCHHHHHHHHHHHhcCC-CCCeeeEEEEEEcC
Q 008898 243 TSQELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN-WSEEEVLREVELLSSIK-HENIVRIIGYCHSK 319 (549)
Q Consensus 243 ~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~-~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~ 319 (549)
+++++..+|++ +||+|+|+.|-.+.. .+|..||||++.+.. .....+.+|++++.+.+ |+||+.|++||+++
T Consensus 74 ~F~d~YkLt~e-----~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTSE-----LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHHH-----HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 35566666653 699999999998854 789999999997653 34577999999999996 99999999999999
Q ss_pred CeEEEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC--CCceEEeeecc
Q 008898 320 EMYAIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN--FHHPQLSDFGA 393 (549)
Q Consensus 320 ~~~~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~~kL~DFGl 393 (549)
..+|+|||.| +|+|..++.+ +.+.+...+..+|+.||.|||.+ ||.|||+||+|||-... ..-+|||||.+
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeecccc
Confidence 9999999999 7788888754 78888999999999999999999 99999999999997543 12479999988
Q ss_pred ccccccccc--cccCccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccch------h
Q 008898 394 AMVHHQSHQ--VSENVKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANR------E 460 (549)
Q Consensus 394 a~~~~~~~~--~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~------~ 460 (549)
+.-...... ........+.+|+..|||||+.. ...|+.+.|.||||||||.||+|.+||.+....+ +
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe 305 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE 305 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence 743222211 12223345789999999999864 2358999999999999999999999998754321 0
Q ss_pred ----hHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 461 ----SLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 461 ----~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
.-..+.+.+.+... ++.|.. =........++++..+..|+.+|.++..++. |+|+.....+
T Consensus 306 ~Cr~CQ~~LFesIQEGkY--eFPdkd-----WahIS~eakdlisnLlvrda~~rlsa~~vln-----hPw~~~~~~e 370 (463)
T KOG0607|consen 306 VCRVCQNKLFESIQEGKY--EFPDKD-----WAHISSEAKDLISNLLVRDAKQRLSAAQVLN-----HPWVQRCAPE 370 (463)
T ss_pred ccHHHHHHHHHHHhccCC--cCChhh-----hHHhhHHHHHHHHHHHhccHHhhhhhhhccC-----Cccccccchh
Confidence 01111111111110 111110 0122345667788899999999999999998 8999876654
No 364
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.4e-34 Score=293.37 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=196.1
Q ss_pred CceEcccCceEEEEEEe-cCCcEEEEEEeecCCc-CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 257 KMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW-SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
...||+|+||.||++.. .+|+.+|+|.+..... ....+.+|+.+++.++|+||+++++++..++..+++|||+ +++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 45699999999999977 5789999998864332 2346788999999999999999999999999999999999 6689
Q ss_pred HHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccc
Q 008898 334 KQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVN 411 (549)
Q Consensus 334 ~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~ 411 (549)
.+++.. +++.....++.|++.||.|||+. +++|+||+|+||+++.+ +.++|+|||++....... .....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~-~~~~l~dfg~~~~~~~~~-----~~~~~ 175 (292)
T cd06657 105 TDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEV-----PRRKS 175 (292)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC-CCEEEcccccceeccccc-----ccccc
Confidence 888744 67778888999999999999999 99999999999999998 689999999875433211 11223
Q ss_pred cccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHH
Q 008898 412 VVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREE 491 (549)
Q Consensus 412 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 491 (549)
..|++.|+|||.+.+..++.++|+|||||++|+|++|..||....... ........ ..+.+.. ....
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~-~~~~~~~~----------~~~~~~~--~~~~ 242 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDN----------LPPKLKN--LHKV 242 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhh----------CCcccCC--cccC
Confidence 568899999999988889999999999999999999999997543221 11111100 0011100 1112
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 492 IEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 492 ~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
...+.+++.+||..+|.+||++.++++ |+||.....
T Consensus 243 ~~~l~~li~~~l~~~P~~R~~~~~ll~-----~~~~~~~~~ 278 (292)
T cd06657 243 SPSLKGFLDRLLVRDPAQRATAAELLK-----HPFLAKAGP 278 (292)
T ss_pred CHHHHHHHHHHHhCCcccCcCHHHHhc-----ChHHhccCC
Confidence 345677889999999999999999999 899877653
No 365
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.2e-35 Score=289.34 Aligned_cols=245 Identities=23% Similarity=0.327 Sum_probs=191.8
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCC------cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTN------WSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
+|.+.+.||+|+||.||++... .+..+++|+++... ....++.+|+.+++.++||||+++++++.+.+.++++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778889999999999999763 35556666665321 1223566899999999999999999999988999999
Q ss_pred Eecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 326 YNLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
+||+ +++|.+++.. +++.....++.|+++||.|||+. +++|+||+|+||+++++ .++|+|||++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~~--~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKNN--LLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeecC--CEeecccCceeec
Confidence 9999 6789888743 67788889999999999999999 99999999999999865 5999999998654
Q ss_pred ccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccccc
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCER 477 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 477 (549)
.... .......|++.|+|||.+.+..++.++|+||||+++|+|++|..||....... ....... +
T Consensus 156 ~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~-----~~~~~~~-~---- 220 (260)
T cd08222 156 MGSC-----DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS-----VVLRIVE-G---- 220 (260)
T ss_pred CCCc-----ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----HHHHHHc-C----
Confidence 3221 12234568899999999988889999999999999999999999996443211 1111111 0
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 478 LIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 478 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
..+. .+......+.+++.+|+..+|++||++.++++ |+|+
T Consensus 221 -~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~-----~~~~ 260 (260)
T cd08222 221 -PTPS----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR-----NPFI 260 (260)
T ss_pred -CCCC----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh-----CCCC
Confidence 1111 22344557788999999999999999999999 7885
No 366
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=306.51 Aligned_cols=257 Identities=22% Similarity=0.285 Sum_probs=208.8
Q ss_pred CCCCCceEcccCceEEEEEEecCCc-EEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVDGQ-VAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~g~-~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
++....-||-||||+|=++...... .+|+|++++... ..+.+..|-.||..++.|+||++|..|.+....|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 4455556999999999988764433 489999986543 23568899999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 328 LL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 328 ~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
.| +|.|+..|+. +.......++..+.+|++|||++ +||+|||||+|+|++.+ |.+||.|||+|+...
T Consensus 501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~-Gy~KLVDFGFAKki~----- 571 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNR-GYLKLVDFGFAKKIG----- 571 (732)
T ss_pred hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccC-CceEEeehhhHHHhc-----
Confidence 98 8999999964 66777788999999999999999 99999999999999999 899999999997643
Q ss_pred ccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
.+.++.++||||.|.|||++.+.+.+.++|.||||+++||||+|.+||...++....- .++..- |.
T Consensus 572 -~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn-----~ILkGi------d~-- 637 (732)
T KOG0614|consen 572 -SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN-----LILKGI------DK-- 637 (732)
T ss_pred -cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH-----HHHhhh------hh--
Confidence 4556779999999999999999999999999999999999999999999877643211 111111 11
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcCCchhhhhhhHHHHHHh
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPT-----MKTLLKLFQEPDYWLKMKREKEELLN 538 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~L~~~~~w~~~~~~~~~~~~ 538 (549)
-.++........+++++.++.+|.+|.. +.+|-+ |.||..-+++.-...
T Consensus 638 -i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk-----H~Wf~gfdweglr~~ 691 (732)
T KOG0614|consen 638 -IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKK-----HRWFEGFDWEGLRSR 691 (732)
T ss_pred -hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHh-----hhhhhcCChhhhhhc
Confidence 1223334456677888999999999987 666666 899988877665444
No 367
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=292.88 Aligned_cols=262 Identities=26% Similarity=0.352 Sum_probs=207.8
Q ss_pred hhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC-C-C----CeeeEEEEEEcCCeE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIK-H-E----NIVRIIGYCHSKEMY 322 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~-h-~----nIv~l~~~~~~~~~~ 322 (549)
++++|.+...+|+|.||+|..+.. ..+..+|||+++.-..-.+..+-|+++|+++. + | -++.+.++|+-.+..
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 377899999999999999999955 55889999999865555567788999999994 2 2 377888899999999
Q ss_pred EEEEeccCCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC---------------
Q 008898 323 AIVYNLLNGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN--------------- 382 (549)
Q Consensus 323 ~lv~e~~~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~--------------- 382 (549)
+||+|.++-|+++|++. ++...+..|+.|+++++.|||++ +++|-||||+|||+.+.
T Consensus 167 CivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 167 CIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred EEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCcccee
Confidence 99999999999999976 88889999999999999999999 99999999999998432
Q ss_pred ----CCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccc
Q 008898 383 ----FHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKAN 458 (549)
Q Consensus 383 ----~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~ 458 (549)
...++|+|||.|+.....+ .+++.|..|.|||++++-+++.++||||+||||+|+.+|...|+... +
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe-n 314 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHH--------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE-N 314 (415)
T ss_pred ccCCCcceEEEecCCcceeccCc--------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC-c
Confidence 1257899999997644432 46788999999999999999999999999999999999999998766 4
Q ss_pred hhhHHHHHHHhhcccccc----------------------------cccCCccc----ccCCHHHHHHHHHHHHHhcccC
Q 008898 459 RESLVLWARSLLSSGLCE----------------------------RLIDPQLN----EEYNREEIEIVMCAARLCLLHS 506 (549)
Q Consensus 459 ~~~l~~~~~~~~~~~~~~----------------------------~~~d~~l~----~~~~~~~~~~l~~li~~Cl~~d 506 (549)
.+.+.+.... ...-... ...++..+ -.....+...+.+|++.||..|
T Consensus 315 ~EHLaMMerI-lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 315 LEHLAMMERI-LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred HHHHHHHHHh-hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 4555332222 1111000 00000000 0112244567999999999999
Q ss_pred CCCCCCHHHHHHHhcCCchhhhh
Q 008898 507 SSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 507 P~~RPs~~evl~~L~~~~~w~~~ 529 (549)
|.+|+|++|+++ |+||+.
T Consensus 394 P~~RiTl~EAL~-----HpFF~~ 411 (415)
T KOG0671|consen 394 PARRITLREALS-----HPFFAR 411 (415)
T ss_pred ccccccHHHHhc-----CHHhhc
Confidence 999999999999 899864
No 368
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-36 Score=332.53 Aligned_cols=261 Identities=26% Similarity=0.312 Sum_probs=203.9
Q ss_pred HHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeE
Q 008898 247 LCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 247 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 322 (549)
+...+-+|.....||.|.||.||.|.. .+|...|+|.++-... ....+.+|..+|..++|||+|++||+=...+..
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 344556788889999999999999976 6799999998864432 234578999999999999999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
+|.|||| +|+|.+.++. .++.....+..|+++|+.|||+. |||||||||.||+|+.+ |.+|++|||.|....
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~-g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFN-GLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecC-CcEEeecccceeEec
Confidence 9999999 8899999865 33333455778999999999999 99999999999999999 799999999997665
Q ss_pred cccccccCccccccccCCccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYG---KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLC 475 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~---~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 475 (549)
.... ..........||+.|||||++.+. +...+.||||+||+..||+||+.||...+.+-..... +
T Consensus 1386 ~~~~-~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~----------V 1454 (1509)
T KOG4645|consen 1386 NNAQ-TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH----------V 1454 (1509)
T ss_pred Cchh-cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH----------H
Confidence 5421 222334567899999999999854 4568999999999999999999999876543221111 1
Q ss_pred ccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 476 ERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 476 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
...-.|.++ ......-.+++..||..||.+|.++.++++ |.+-+...
T Consensus 1455 ~~gh~Pq~P----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle-----~~f~~~~~ 1501 (1509)
T KOG4645|consen 1455 AAGHKPQIP----ERLSSEGRDFLEHCLEQDPKMRWTASQLLE-----HAFGKSCT 1501 (1509)
T ss_pred hccCCCCCc----hhhhHhHHHHHHHHHhcCchhhhHHHHHHH-----hhcccccc
Confidence 111223333 334455566779999999999999999998 55544443
No 369
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=8.6e-34 Score=286.26 Aligned_cols=260 Identities=24% Similarity=0.315 Sum_probs=198.4
Q ss_pred CCCCCceEcccCceEEEEEEe----cCCcEEEEEEeecCCc-----CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH----VDGQVAAVKVLKCTNW-----SEEEVLREVELLSSI-KHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~~AvK~l~~~~~-----~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 322 (549)
+|...+.||+|+||.||++.. .++..+|||+++.... ..+.+.+|+.++.++ +||||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477788999999999999864 3578899999975421 224577899999999 599999999999999999
Q ss_pred EEEEecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
++||||+ +|+|.+++.. +++.....++.|+++||.|||+. +++|+||+|+||+++.+ +.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSE-GHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCC-CCEEEEECccccccc
Confidence 9999999 6799998853 56777888999999999999998 99999999999999998 689999999986543
Q ss_pred cccccccCccccccccCCccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 399 QSHQVSENVKPVNVVGTFGYLAPEYMMYGK--VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
... ........|++.|+|||.+.+.. .+.++|+||||+++|||++|..||....... ....+.......
T Consensus 157 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~---- 227 (288)
T cd05583 157 AEE----EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEISRRILKS---- 227 (288)
T ss_pred ccc----ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHHHHHHHcc----
Confidence 321 11122356899999999987665 7889999999999999999999996443211 111111111111
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
.+... ......+.+++.+||+.||.+|||++++.+.|+ |+|++.....+
T Consensus 228 ---~~~~~----~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~--~~~~~~~~~~~ 276 (288)
T cd05583 228 ---KPPFP----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKN--HPFFQGIDWDD 276 (288)
T ss_pred ---CCCCC----cccCHHHHHHHHHHhcCCHhhccCcchHHHHhc--CcccccCCHHH
Confidence 11111 223345778889999999999999887776653 57887665533
No 370
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=303.32 Aligned_cols=240 Identities=25% Similarity=0.390 Sum_probs=194.1
Q ss_pred CceEcccCceEEEEEEec--CCc--EEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-
Q 008898 257 KMLIGQGGNSKVYRTNHV--DGQ--VAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL- 329 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~--~g~--~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~- 329 (549)
.++||+|.||.|++|.+. +|+ .||||+++.+... ..+|.+|+.+|.+|+|+|+++|||+..+ ....+|+|++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 346999999999999773 354 6899999876543 4789999999999999999999999987 7788999999
Q ss_pred CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 330 NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 330 ~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
.|+|.+.|.. +-......++.|||.||.||..+ ++|||||...|+||-.. ..+||||||+.+-........
T Consensus 194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasp-rtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASP-RTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheeccc-ceeeeecccceeccCCCCcce
Confidence 7999999976 44556778999999999999999 99999999999999886 589999999987765543322
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
. ......-.+.|+|||.+....++.++|||+|||.+|||+| |..||-+-...+ +.+.+|..-
T Consensus 270 v--m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q---------------IL~~iD~~e 332 (1039)
T KOG0199|consen 270 V--MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ---------------ILKNIDAGE 332 (1039)
T ss_pred E--ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH---------------HHHhccccc
Confidence 1 1111223568999999999999999999999999999999 688997654322 112233332
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.-.-+..+.+.+++++..||+.+|++|||+..|.+
T Consensus 333 rLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 333 RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred cCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 23335677889999999999999999999999974
No 371
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.2e-33 Score=316.76 Aligned_cols=140 Identities=31% Similarity=0.397 Sum_probs=124.9
Q ss_pred cCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
++|.+.+.||+|+||.||+|.+. +++.||||+++..... ...+..|+.+++.++||||+++++++...+.+++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999874 6899999999754321 246788999999999999999999999999999999
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
||+ +|+|.+++.. +.+...+.++.||+.||.|||.. +||||||||+|||++.+ +.++|+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~-g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNE-GHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCC-CCEEEEeCCCCc
Confidence 999 7899999864 56777889999999999999998 99999999999999988 689999999985
No 372
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-34 Score=296.21 Aligned_cols=260 Identities=22% Similarity=0.322 Sum_probs=199.6
Q ss_pred CCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcCH----HHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWSE----EEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
-|..++-||-|+||+|.+++.. +...||+|.+.+.+... ..+..|-+||.....+-||+||-.|++++.+|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 3667778999999999999774 46799999997654322 346779999999999999999999999999999999
Q ss_pred cc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccc---ccccc
Q 008898 328 LL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM---VHHQS 400 (549)
Q Consensus 328 ~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~---~~~~~ 400 (549)
|+ +|++..+|-+ |.+.....++..+.+|+++.|.. |+|||||||+|||||.+ |++||+|||||. |..++
T Consensus 710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrd-GHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccC-Cceeeeeccccccceecccc
Confidence 99 8899888855 56666777889999999999999 99999999999999999 899999999984 33333
Q ss_pred cccccCc----------------------------------cccccccCCccccccccccCCCCchhhHHHHHHHHHHHH
Q 008898 401 HQVSENV----------------------------------KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELI 446 (549)
Q Consensus 401 ~~~~~~~----------------------------------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ell 446 (549)
.+...+. .....+||+.|+|||++...+|+..+|+||.|||||||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 2221110 112468999999999999999999999999999999999
Q ss_pred cCCCCCCCcccchh--hHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHhcCC
Q 008898 447 TGKEAIQTNKANRE--SLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMK-TLLKLFQEP 523 (549)
Q Consensus 447 tG~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~-evl~~L~~~ 523 (549)
.|++||-...+... .+..| ...++-..-..++.++...+..| |...|-+.--+-. +|-.
T Consensus 866 ~g~~pf~~~tp~~tq~kv~nw----------~~~l~~~~~~~ls~e~~~li~kL---c~sad~RLGkng~d~vKa----- 927 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVINW----------RNFLHIPYQGNLSKEALDLIQKL---CCSADSRLGKNGADQVKA----- 927 (1034)
T ss_pred hCCCCccCCCCCcceeeeeeh----------hhccccccccccCHHHHHHHHHH---hcChhhhhcccchhhhhc-----
Confidence 99999988776332 22222 23344444556677777666544 5544433322333 3444
Q ss_pred chhhhhhhHHH
Q 008898 524 DYWLKMKREKE 534 (549)
Q Consensus 524 ~~w~~~~~~~~ 534 (549)
|+||+......
T Consensus 928 HpfFkgIDfss 938 (1034)
T KOG0608|consen 928 HPFFKGIDFSS 938 (1034)
T ss_pred CccccccchHh
Confidence 79998877665
No 373
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=7e-34 Score=279.99 Aligned_cols=238 Identities=27% Similarity=0.346 Sum_probs=192.2
Q ss_pred EcccCceEEEEEEec-CCcEEEEEEeecCCc----CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCH
Q 008898 260 IGQGGNSKVYRTNHV-DGQVAAVKVLKCTNW----SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSL 333 (549)
Q Consensus 260 lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL 333 (549)
||.|+||.||++... +++.+|+|+++.... ....+..|+.+++.++||||+++++.+..++..+++||++ +++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999874 589999999876543 2346788999999999999999999999999999999999 8899
Q ss_pred HHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCcccc
Q 008898 334 KQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPV 410 (549)
Q Consensus 334 ~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 410 (549)
.+++.. +++.....++.|+++||.|||+. +++|+||+|+||+++.+ +.++|+|||++....... ....
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~-~~~~l~d~~~~~~~~~~~-----~~~~ 151 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDAD-GHIKLTDFGLAKELSSEG-----SRTN 151 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCC-CcEEEeecCcceecccCC-----Cccc
Confidence 999865 57788899999999999999998 99999999999999998 689999999986543321 1223
Q ss_pred ccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHH
Q 008898 411 NVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNRE 490 (549)
Q Consensus 411 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 490 (549)
...|+..|+|||.+.+..++.++|+||||+++|+|++|..||...... .. ....... .. .++..
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~---~~~~~~~-------~~----~~~~~ 215 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--EI---YEKILKD-------PL----RFPEF 215 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HH---HHHHhcC-------CC----CCCCC
Confidence 456888999999999888999999999999999999999999655431 11 1111110 01 11222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCH---HHHHHHhcCCchhh
Q 008898 491 EIEIVMCAARLCLLHSSSRRPTM---KTLLKLFQEPDYWL 527 (549)
Q Consensus 491 ~~~~l~~li~~Cl~~dP~~RPs~---~evl~~L~~~~~w~ 527 (549)
....+.++++.|+..||++||++ .++++ |+||
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~-----~~~f 250 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGGAEEIKA-----HPFF 250 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCcccHHHHHh-----CCCC
Confidence 24567788999999999999999 67776 6775
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=303.57 Aligned_cols=262 Identities=26% Similarity=0.364 Sum_probs=216.8
Q ss_pred HHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEE-----c
Q 008898 246 ELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCH-----S 318 (549)
Q Consensus 246 el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~-----~ 318 (549)
.+..-++-|++...||.|.+|+||++.+ .+|+.+|+|+...+....+++..|.+||+.+ +|||++.++|++. .
T Consensus 13 ~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 13 SLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred hCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence 3344467799999999999999999977 6799999999988888888999999999988 5999999999884 3
Q ss_pred CCeEEEEEecc-CCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeec
Q 008898 319 KEMYAIVYNLL-NGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFG 392 (549)
Q Consensus 319 ~~~~~lv~e~~-~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFG 392 (549)
++.++|||||| +||..+.++. +.|..+..|+..++.||.+||.+ .+||||||-.|||++.+ +.+||+|||
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e-~~VKLvDFG 168 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTEN-AEVKLVDFG 168 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEecc-CcEEEeeee
Confidence 57899999999 6888888854 77788888999999999999999 99999999999999999 789999999
Q ss_pred cccccccccccccCccccccccCCccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHH
Q 008898 393 AAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-----KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWAR 467 (549)
Q Consensus 393 la~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~ 467 (549)
.+... .++.....+.+|||.|||||++... .|+..+|+||||++..||--|.+|+-+..+....+
T Consensus 169 vSaQl-----dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF----- 238 (953)
T KOG0587|consen 169 VSAQL-----DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF----- 238 (953)
T ss_pred eeeee-----ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc-----
Confidence 97443 3344556688999999999999754 47789999999999999999999998877654322
Q ss_pred HhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 468 SLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
.-..+|.....-+....+.+.++|..||..|-.+||++.++++ |++++.+.-++
T Consensus 239 --------~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~-----hpFi~e~~~e~ 292 (953)
T KOG0587|consen 239 --------LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK-----HPFITEQPNER 292 (953)
T ss_pred --------cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc-----CCcccccccHH
Confidence 1112232223335677888999999999999999999999998 78876444333
No 375
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=304.59 Aligned_cols=249 Identities=26% Similarity=0.345 Sum_probs=193.7
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC--cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC------eEEE
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN--WSEEEVLREVELLSSIKHENIVRIIGYCHSKE------MYAI 324 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~~~l 324 (549)
|...+.||+||||.||+|++ .+|+.+|||.++... ...+...+|+++|++|+|+|||+++++=++.. .-.+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 44556799999999999986 679999999997643 34466889999999999999999998765443 5678
Q ss_pred EEecc-CCCHHHHHHH------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC-C--ceEEeeeccc
Q 008898 325 VYNLL-NGSLKQYLKQ------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF-H--HPQLSDFGAA 394 (549)
Q Consensus 325 v~e~~-~gsL~~~l~~------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~-~--~~kL~DFGla 394 (549)
+|||| +|||...|++ +++.+.+.+..++..||.|||++ +|+||||||.||++-... | .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 89999 8899999964 88899999999999999999999 999999999999985321 2 3489999999
Q ss_pred cccccccccccCccccccccCCcccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcccch-hhHHHHHHHhhcc
Q 008898 395 MVHHQSHQVSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYGVVLLELITGKEAIQTNKANR-ESLVLWARSLLSS 472 (549)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~-~~l~~~~~~~~~~ 472 (549)
+... ++.....++||+.|++||.+.. +.|+..+|.|||||++|+..||..||....... ..-.+|.......
T Consensus 172 rel~------d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp 245 (732)
T KOG4250|consen 172 RELD------DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKP 245 (732)
T ss_pred ccCC------CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCC
Confidence 7643 4446678899999999999984 789999999999999999999999997654432 2223444443333
Q ss_pred cccccccCCcc------------cccCCHHHHHHHHHHHHHhcccCCCCCC
Q 008898 473 GLCERLIDPQL------------NEEYNREEIEIVMCAARLCLLHSSSRRP 511 (549)
Q Consensus 473 ~~~~~~~d~~l------------~~~~~~~~~~~l~~li~~Cl~~dP~~RP 511 (549)
.-+.-..++.. +...+......+...+..++..+|++|-
T Consensus 246 ~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 246 SGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred CceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 22221111111 2233445667777888889999999998
No 376
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=301.89 Aligned_cols=240 Identities=24% Similarity=0.323 Sum_probs=191.5
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEec
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
++.|.....+|.|+|+.|-.+.+ .+++.+++|++.... .+..+|+.++... +||||+++.+.+.++...++|||.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 56788888899999999999876 568999999997652 3445677666655 799999999999999999999999
Q ss_pred cCC-CHHHHHHHhc--hhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEe-cCCCceEEeeeccccccccccccc
Q 008898 329 LNG-SLKQYLKQLK--WNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLS-ENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~g-sL~~~l~~~~--~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
+.| -|.+.+.... ..++..++.+|+.|+.|||++ |||||||||+|||++ +. ++++|+|||.+......
T Consensus 398 l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~-g~lrltyFG~a~~~~~~---- 469 (612)
T KOG0603|consen 398 LDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSA-GHLRLTYFGFWSELERS---- 469 (612)
T ss_pred ccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCC-CcEEEEEechhhhCchh----
Confidence 954 4555553322 246667999999999999998 999999999999995 55 79999999998654432
Q ss_pred cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN 484 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 484 (549)
..+.+-|..|.|||++...+|++++||||||++||+||+|+.||.......+ + ... + ..
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e-i---~~~-i------------~~ 528 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE-I---HTR-I------------QM 528 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH-H---HHh-h------------cC
Confidence 3355778899999999999999999999999999999999999987654311 1 111 1 11
Q ss_pred ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 485 EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 485 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+.++....+...+|++.||+.||.+||+|.++.. |+|+
T Consensus 529 ~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~-----h~w~ 566 (612)
T KOG0603|consen 529 PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA-----HPWF 566 (612)
T ss_pred CccccccCHHHHHHHHHhccCChhhCcChhhhcc-----Ccch
Confidence 2222334456777889999999999999999998 8999
No 377
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.4e-34 Score=276.95 Aligned_cols=262 Identities=22% Similarity=0.283 Sum_probs=193.4
Q ss_pred cCCCCCceEcccCceEEEEEEec---C--CcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEc-CCeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV---D--GQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHS-KEMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~---~--g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~ 322 (549)
..|+....||+|.||.||++... + .+.+|+|.++..... .....+|+..++.++|||++.|..++.+ +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 46888899999999999999432 2 237999999765321 2457899999999999999999998866 7899
Q ss_pred EEEEeccCCCHHHHHH--------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC---CCceEEeee
Q 008898 323 AIVYNLLNGSLKQYLK--------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN---FHHPQLSDF 391 (549)
Q Consensus 323 ~lv~e~~~gsL~~~l~--------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~~kL~DF 391 (549)
++++||...+|.+.++ .++......++.||+.|+.|||++ -|+||||||.|||+..+ .|.+||+||
T Consensus 104 ~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 104 WLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeecc
Confidence 9999999999999984 256667788999999999999999 89999999999999755 358999999
Q ss_pred ccccccccccccccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchh-----hHHHH
Q 008898 392 GAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRE-----SLVLW 465 (549)
Q Consensus 392 Gla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-----~l~~~ 465 (549)
|+|+.+...-. .-.....++-|+.|.|||.+.|.. |+.++||||+|||+.||++-.+.|......-. ...+.
T Consensus 181 GlaR~~~~plk--pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 181 GLARLFNNPLK--PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cHHHHhhcccc--ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99987765322 222233567799999999999765 89999999999999999999988876543111 01111
Q ss_pred HHHhhcccccc--cccCCcccccC------------CH----HH-------HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 466 ARSLLSSGLCE--RLIDPQLNEEY------------NR----EE-------IEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 466 ~~~~~~~~~~~--~~~d~~l~~~~------------~~----~~-------~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.+....-|... .+.+-....++ ++ .. ...-.+++.++|..||.+|.|+++.++
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 11111111111 11111000111 00 00 122667889999999999999999998
No 378
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2.6e-33 Score=275.18 Aligned_cols=224 Identities=23% Similarity=0.196 Sum_probs=176.5
Q ss_pred cCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHHHHHHH-
Q 008898 263 GGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLKQYLKQ- 339 (549)
Q Consensus 263 G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~~~l~~- 339 (549)
|.||.||++.+ .+++.+|+|.++... ...+|...+....||||+++++++...+.++++|||+ +|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 89999999977 678999999997543 2334555555667999999999999999999999999 6799998854
Q ss_pred --hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCCc
Q 008898 340 --LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFG 417 (549)
Q Consensus 340 --~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~ 417 (549)
+++.....++.|+++||.|||+. +|+||||||+||+++.+ +.++|+|||.+...... .....++..
T Consensus 80 ~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~-~~~~l~df~~~~~~~~~--------~~~~~~~~~ 147 (237)
T cd05576 80 LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDR-GHIQLTYFSRWSEVEDS--------CDGEAVENM 147 (237)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC-CCEEEecccchhccccc--------cccCCcCcc
Confidence 67788899999999999999999 99999999999999998 68999999987443221 123346778
Q ss_pred cccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHH
Q 008898 418 YLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMC 497 (549)
Q Consensus 418 y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 497 (549)
|+|||.+.+..++.++|+||+||++|||++|..|+....... .......++.. ....+.+
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------------~~~~~~~~~~~----~~~~~~~ 207 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------------NTHTTLNIPEW----VSEEARS 207 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------------ccccccCCccc----CCHHHHH
Confidence 999999988889999999999999999999998875322110 00000111122 2345777
Q ss_pred HHHHhcccCCCCCCCH-----HHHHHHhcCCchhh
Q 008898 498 AARLCLLHSSSRRPTM-----KTLLKLFQEPDYWL 527 (549)
Q Consensus 498 li~~Cl~~dP~~RPs~-----~evl~~L~~~~~w~ 527 (549)
++.+|++.||.+||++ .++++ |+||
T Consensus 208 li~~~l~~dp~~R~~~~~~~~~~~~~-----h~~~ 237 (237)
T cd05576 208 LLQQLLQFNPTERLGAGVAGVEDIKS-----HPFF 237 (237)
T ss_pred HHHHHccCCHHHhcCCCccchHHHHc-----CCCC
Confidence 8899999999999996 77776 7775
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=252.52 Aligned_cols=262 Identities=22% Similarity=0.313 Sum_probs=201.7
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+|...+.||+|.||+||+++. .+++.||+|.++.++.+ .....+|+.+|+.++|+||++++++...+..+.+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 455667899999999999976 56899999999876543 35789999999999999999999999999999999999
Q ss_pred cCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 LNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
|..+|..|... +.......++.|++.||.++|++ ++.|||+||.|.|++.+ |++||+|||+|+-+.-.-
T Consensus 83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~n-gelkladfglarafgipv--- 155 (292)
T KOG0662|consen 83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRN-GELKLADFGLARAFGIPV--- 155 (292)
T ss_pred hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccC-CcEEecccchhhhcCCce---
Confidence 99999999865 55667778999999999999999 99999999999999999 899999999996543211
Q ss_pred cCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc-----ccccc
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG-----LCERL 478 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~-----~~~~~ 478 (549)
......+-|..|.+|.++.+.+ |+...|+||-|||+.|+.....|.-...+.++++......+.... .+..+
T Consensus 156 --rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 156 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred --EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 1112234588999999998776 799999999999999998855554444444444444333332111 12344
Q ss_pred cCCcccccCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 479 IDPQLNEEYNR---------EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 479 ~d~~l~~~~~~---------~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
.|-.....|+. ..-..=.++++..+.-+|.+|.+++..++ |++|.
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq-----hpyf~ 287 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ-----HPYFS 287 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc-----Ccccc
Confidence 44443333332 22233456778889999999999999998 66654
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-35 Score=275.76 Aligned_cols=268 Identities=24% Similarity=0.372 Sum_probs=200.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCCCCCeeeEEEEEEc--------C
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIKHENIVRIIGYCHS--------K 319 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~--------~ 319 (549)
+.|....+||+|.||.||+++. ++|+.||+|.+-.++. -.....+|+.+|..|+|+|++.++.+|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 3456667899999999999976 5688889887643221 13567899999999999999999988843 2
Q ss_pred CeEEEEEeccCCCHHHHHH----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 320 EMYAIVYNLLNGSLKQYLK----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 320 ~~~~lv~e~~~gsL~~~l~----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
..+++|+.+|..+|...|. +++..++.+++.++.+||.|+|.+ .|+|||+||.|+||+.+ |.+||+|||+++
T Consensus 97 ~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~d-gilklADFGlar 172 (376)
T KOG0669|consen 97 ATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKD-GILKLADFGLAR 172 (376)
T ss_pred ceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCC-ceEEeecccccc
Confidence 3699999999988888873 588899999999999999999999 99999999999999999 799999999998
Q ss_pred ccccccccccCccccccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc--
Q 008898 396 VHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS-- 472 (549)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~-- 472 (549)
.+..+....... .++.+-|..|.+||.+.+. .|+++.|||..|||+.||++|.+-++.+.+.+. +.. ...+...
T Consensus 173 ~fs~~~n~~kpr-ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq-l~~-Is~LcGs~t 249 (376)
T KOG0669|consen 173 AFSTSKNVVKPR-YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ-LHL-ISQLCGSIT 249 (376)
T ss_pred ceecccccCCCC-cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH-HHH-HHHHhccCC
Confidence 777665444333 4455669999999998865 699999999999999999999999988765321 111 1111111
Q ss_pred --ccc--------ccccCCcccccCCHHH---H------HHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 473 --GLC--------ERLIDPQLNEEYNREE---I------EIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 473 --~~~--------~~~~d~~l~~~~~~~~---~------~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
-+. ..+--+.++....... . +..++++..++..||.+||.+++++. |.||....
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln-----h~~F~kdp 322 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN-----HDFFWKDP 322 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc-----hhhhhcCC
Confidence 000 0000000111100111 1 24567889999999999999999998 77775443
No 381
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-33 Score=270.44 Aligned_cols=195 Identities=23% Similarity=0.346 Sum_probs=170.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCc----CHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNW----SEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAI 324 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~----~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 324 (549)
.++|....+||+|+|++|..+++ ++.+.||+|++++.-. +.+-+..|-.+..+. +||++|-|..+|+++..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 35799999999999999999987 6689999999986422 223356777777655 79999999999999999999
Q ss_pred EEecc-CCCHHHHHH---HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 325 VYNLL-NGSLKQYLK---QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 325 v~e~~-~gsL~~~l~---~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
|.||. +|+|.-+++ +++++.+..+...|+-||.|||+. |||+||||.+|+|+|.. |++||+|+|+++
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldae-ghikltdygmck----- 399 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAE-GHIKLTDYGMCK----- 399 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccC-Cceeecccchhh-----
Confidence 99999 667765553 478888888999999999999999 99999999999999999 899999999994
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQT 454 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 454 (549)
........+.++||||.|.|||++.+..|...+|+|+|||+|+||+.|+.||+-
T Consensus 400 e~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 400 EGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred cCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 345566777899999999999999999999999999999999999999999974
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=7.9e-33 Score=303.45 Aligned_cols=260 Identities=19% Similarity=0.254 Sum_probs=170.8
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cC----CcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEE------EEcC
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VD----GQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGY------CHSK 319 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~----g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~------~~~~ 319 (549)
.++|...+.||+|+||.||+|.+ .+ +..+|+|.++..... +....| .++...+.++..++.. +..+
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-HHHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence 56899999999999999999987 45 789999988643221 111111 1222223333222211 2456
Q ss_pred CeEEEEEecc-CCCHHHHHHHhc-----------------------hhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCC
Q 008898 320 EMYAIVYNLL-NGSLKQYLKQLK-----------------------WNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSS 375 (549)
Q Consensus 320 ~~~~lv~e~~-~gsL~~~l~~~~-----------------------~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~ 375 (549)
..++++++|+ +|+|.+++.... ......++.||+.||.|||+. +|+||||||+
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~ 284 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQ 284 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHH
Confidence 7899999999 678998885421 122446899999999999999 9999999999
Q ss_pred CEEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccC----------------------CCCchh
Q 008898 376 NILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG----------------------KVDEKI 433 (549)
Q Consensus 376 NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~----------------------~~~~k~ 433 (549)
|||++.+.+.+||+|||+|....... ........||+.|+|||.+... .++.++
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGI----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred HEEEeCCCCcEEEEeCCCcccccccc----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 99999754689999999996543221 1223356889999999966432 234567
Q ss_pred hHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc----cccccCCccccc----C--CHHHHHHHHHHHHHhc
Q 008898 434 DVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL----CERLIDPQLNEE----Y--NREEIEIVMCAARLCL 503 (549)
Q Consensus 434 DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~----~~~~~d~~l~~~----~--~~~~~~~l~~li~~Cl 503 (549)
|||||||+||||+++..++... +..+...+...+. ......+..... + .........+++..||
T Consensus 361 DVwSlGviL~el~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 9999999999999977664322 1111111111100 000111110000 0 0001123457999999
Q ss_pred ccCCCCCCCHHHHHHHhcCCchhhhhhh
Q 008898 504 LHSSSRRPTMKTLLKLFQEPDYWLKMKR 531 (549)
Q Consensus 504 ~~dP~~RPs~~evl~~L~~~~~w~~~~~ 531 (549)
..||.+|||+.++++ |+||....
T Consensus 435 ~~dP~kR~ta~e~L~-----Hpff~~~~ 457 (566)
T PLN03225 435 RFKGRQRISAKAALA-----HPYFDREG 457 (566)
T ss_pred cCCcccCCCHHHHhC-----CcCcCCCC
Confidence 999999999999999 89986544
No 383
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-33 Score=281.80 Aligned_cols=260 Identities=27% Similarity=0.426 Sum_probs=194.7
Q ss_pred CCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHh--cCCCCCeeeEEEEEEcCC----eEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLS--SIKHENIVRIIGYCHSKE----MYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~--~l~h~nIv~l~~~~~~~~----~~~lv~ 326 (549)
......+||+|.||.||+|.+ +++.||||++.... .+.+..|-+|.+ .++|+||+++++.-.... .++||+
T Consensus 211 pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred chhhHHHhhcCccceeehhhc-cCceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 345567899999999999987 45999999997432 356777877776 458999999999876555 899999
Q ss_pred ecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhC------CCCCEEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 327 NLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHT------CDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 327 e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~------~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
+|. .|+|.+||+. .+|.+..+++.-|++||+|||+. ++.+|+|||||+.||||..| ....|+|||+|..+
T Consensus 288 ~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D-lTccIaDFGLAl~~ 366 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND-LTCCIADFGLALRL 366 (534)
T ss_pred eeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC-CcEEeeccceeEEe
Confidence 998 8999999976 89999999999999999999975 35689999999999999999 68999999999877
Q ss_pred ccccccccCccccccccCCccccccccccCC-CC-----chhhHHHHHHHHHHHHcCCCCCCC------------cccch
Q 008898 398 HQSHQVSENVKPVNVVGTFGYLAPEYMMYGK-VD-----EKIDVYSYGVVLLELITGKEAIQT------------NKANR 459 (549)
Q Consensus 398 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~-----~k~DvwSlGvil~elltG~~p~~~------------~~~~~ 459 (549)
.... ........+||.+|||||++.+.- +. .+.||||+|.+||||++....++. .-...
T Consensus 367 ~p~~---~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 367 EPGK---PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred cCCC---CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 6432 223334578999999999887542 22 369999999999999997644431 00011
Q ss_pred hhHHHHHHHhhcccccccccCCcccccC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 460 ESLVLWARSLLSSGLCERLIDPQLNEEY-NREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 460 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
..+..........+. .|.++..+ ....+..+.+.+..||..||+-|.|+.=+.+++.+..
T Consensus 444 Pt~e~mq~~VV~kK~-----RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQ-----RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred CCHHHHHHHHHhhcc-----CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 112222222222211 22222211 2245678899999999999999999998888765543
No 384
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=4.8e-33 Score=257.72 Aligned_cols=270 Identities=23% Similarity=0.354 Sum_probs=217.2
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC-CCCeeeEEEEEEcC--CeEEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIK-HENIVRIIGYCHSK--EMYAIVY 326 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~--~~~~lv~ 326 (549)
.++|++.+.+|+|.|+.||.|.. .+.++++||++++-. .+.+.+|+.||+.|. ||||++|+++..+. ....+++
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 46788999999999999999976 668899999998543 467899999999997 99999999988654 5778899
Q ss_pred ecc-CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 327 NLL-NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 327 e~~-~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
|++ +-+.......++...+..++.+++.||.|||++ ||.|||+||.|+++|.....++|+|+|+|.+.......+
T Consensus 115 E~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn- 190 (338)
T KOG0668|consen 115 EYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN- 190 (338)
T ss_pred hhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCceee-
Confidence 999 556777777888889999999999999999999 999999999999999877789999999998766543322
Q ss_pred CccccccccCCccccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccc------ccc
Q 008898 406 NVKPVNVVGTFGYLAPEYMM-YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLC------ERL 478 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~------~~~ 478 (549)
-.+.+..|--||.+. ...|+...|+|||||+|..|+..+.||-....+.++++..++.+.-+... .--
T Consensus 191 -----VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~ 265 (338)
T KOG0668|consen 191 -----VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID 265 (338)
T ss_pred -----eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence 234566788999876 45689999999999999999999999998888888888887766543211 111
Q ss_pred cCCcccc---cCC------------H-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHHHH
Q 008898 479 IDPQLNE---EYN------------R-EEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKEEL 536 (549)
Q Consensus 479 ~d~~l~~---~~~------------~-~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~~~ 536 (549)
+||.+.. .++ . -......+++...|+.|-++|||++|... |+||....+.+..
T Consensus 266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~-----HpyF~~~~~~~~~ 334 (338)
T KOG0668|consen 266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA-----HPYFAPVREAESS 334 (338)
T ss_pred CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc-----CchHHHHHHHhhc
Confidence 2332211 000 0 11245778889999999999999999998 9999888776654
No 385
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-32 Score=272.15 Aligned_cols=282 Identities=25% Similarity=0.392 Sum_probs=213.3
Q ss_pred HHHHhhcCCccccCHHHHHhhhcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhc--CCCC
Q 008898 230 LAVLEAEGSSRRFTSQELCHLTHNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSS--IKHE 307 (549)
Q Consensus 230 ~~~~~~~~~~~~~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~--l~h~ 307 (549)
+..++..++..-+..-....+..+....+.||+|.||.||+|.+ .|..||||++... ++....+|.+|.+. |+|+
T Consensus 189 l~~~~tSGSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHE 265 (513)
T KOG2052|consen 189 LDDLETSGSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--DERSWFRETEIYQTVMLRHE 265 (513)
T ss_pred HHhhccCCCCCCchhHhHHhhhheeEEEEEecCccccceeeccc-cCCceEEEEeccc--chhhhhhHHHHHHHHHhccc
Confidence 33444455555555555556677788889999999999999998 4788999999744 35668888888874 5999
Q ss_pred CeeeEEEEEEcCC----eEEEEEecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhC-----CCCCEEEecCCCC
Q 008898 308 NIVRIIGYCHSKE----MYAIVYNLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHT-----CDPPIIHRDVKSS 375 (549)
Q Consensus 308 nIv~l~~~~~~~~----~~~lv~e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~-----~~~~iiHrDlkp~ 375 (549)
||+.+++.-..++ .++||.+|- .|||++||.+ ++....++++.-+|.||.+||.. .++.|.|||||+.
T Consensus 266 NILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSK 345 (513)
T KOG2052|consen 266 NILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSK 345 (513)
T ss_pred hhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccc
Confidence 9999998765443 688999888 8999999976 66677899999999999999963 4567999999999
Q ss_pred CEEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCC----C-C-chhhHHHHHHHHHHHHcC-
Q 008898 376 NILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGK----V-D-EKIDVYSYGVVLLELITG- 448 (549)
Q Consensus 376 NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~-~-~k~DvwSlGvil~elltG- 448 (549)
|||+..+ +..-|+|+|+|..+.... ..-.......+||-+|||||++...- + + ..+||||||.++||+...
T Consensus 346 NILVKkn-~~C~IADLGLAv~h~~~t-~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc 423 (513)
T KOG2052|consen 346 NILVKKN-GTCCIADLGLAVRHDSDT-DTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRC 423 (513)
T ss_pred cEEEccC-CcEEEeeceeeEEecccC-CcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999 789999999997665543 23334556779999999999986431 1 1 358999999999999752
Q ss_pred ---------CCCCCCcccchhhHHHHHHHhhcccccccccCCccc-ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 449 ---------KEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLN-EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 449 ---------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
+.||.+--+.+.++....+.. .-+-+-|.++ ...+.+....|.++++.||..+|.-|-|+=-|-+
T Consensus 424 ~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVV-----Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK 498 (513)
T KOG2052|consen 424 ESGGIVEEYQLPYYDVVPSDPSFEEMRKVV-----CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK 498 (513)
T ss_pred hcCCEehhhcCCcccCCCCCCCHHHHhcce-----eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence 377776666555554433222 2222233332 3345677889999999999999999999887777
Q ss_pred Hhc
Q 008898 519 LFQ 521 (549)
Q Consensus 519 ~L~ 521 (549)
.|.
T Consensus 499 tl~ 501 (513)
T KOG2052|consen 499 TLA 501 (513)
T ss_pred HHH
Confidence 553
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.9e-33 Score=277.01 Aligned_cols=260 Identities=26% Similarity=0.418 Sum_probs=198.5
Q ss_pred HhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCH--------HHHHHHHHHHhcCCCCCeeeEEEEEE-
Q 008898 248 CHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSE--------EEVLREVELLSSIKHENIVRIIGYCH- 317 (549)
Q Consensus 248 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~--------~~~~~E~~il~~l~h~nIv~l~~~~~- 317 (549)
..+.++|-.+.+||+|||+.||++.. ...+.+|||+-....... +...+|..|-+.|.||.||++|++|.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 34556777888999999999999966 557899999864332111 34678999999999999999999985
Q ss_pred cCCeEEEEEeccCC-CHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC--CCceEEeee
Q 008898 318 SKEMYAIVYNLLNG-SLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN--FHHPQLSDF 391 (549)
Q Consensus 318 ~~~~~~lv~e~~~g-sL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~~kL~DF 391 (549)
+.+.++-|.|||.| +|+-||++ +++.+...|+.||..||.||.+. ..+|||-||||.||||.+. .|.+||+||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 66789999999965 68888865 77888999999999999999988 5699999999999999542 368999999
Q ss_pred cccccccccccccc--CccccccccCCccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHH
Q 008898 392 GAAMVHHQSHQVSE--NVKPVNVVGTFGYLAPEYMMYG----KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLW 465 (549)
Q Consensus 392 Gla~~~~~~~~~~~--~~~~~~~~gt~~y~APE~~~~~----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~ 465 (549)
|+++++....+... -..+....||..|++||.|.-+ +.+.|+||||+|||+|..+.|+.||..+...++.+..
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe- 696 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE- 696 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh-
Confidence 99998876443322 2234467899999999998755 3688999999999999999999999877654443321
Q ss_pred HHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 466 ARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 466 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
..++....+.--.. +........+|++||++--++|....++..
T Consensus 697 -NTIlkAtEVqFP~K--------PvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 697 -NTILKATEVQFPPK--------PVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -hchhcceeccCCCC--------CccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 11111111111111 112234566789999999999998887765
No 387
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=5.1e-32 Score=299.76 Aligned_cols=249 Identities=25% Similarity=0.442 Sum_probs=194.9
Q ss_pred cCCCCCceEcccCceEEEEEEec----C----CcEEEEEEeecCCcC--HHHHHHHHHHHhcC-CCCCeeeEEEEEEcCC
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHV----D----GQVAAVKVLKCTNWS--EEEVLREVELLSSI-KHENIVRIIGYCHSKE 320 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~----~----g~~~AvK~l~~~~~~--~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 320 (549)
++..+.+.||+|.||.|++|... . ...||||.++..... .+.+..|+++|+.+ +|+||+.++|+|.+.+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34455568999999999999532 1 357999999865543 45688999999988 5999999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHH-------------------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEe
Q 008898 321 MYAIVYNLL-NGSLKQYLKQ-------------------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLS 380 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~-------------------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~ 380 (549)
.++++.||+ .|+|.+|++. +...+.+.++.|||.|++||++. ++|||||..+|||++
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEec
Confidence 999999999 8999999953 44567789999999999999999 999999999999999
Q ss_pred cCCCceEEeeeccccccccccccccCcccccccc--CCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCccc
Q 008898 381 ENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVG--TFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKA 457 (549)
Q Consensus 381 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~g--t~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~ 457 (549)
.+ ..+||+|||+|+............ -.| ...|||||.+....|+.++|||||||+||||+| |..|+..-..
T Consensus 453 ~~-~~~kIaDFGlar~~~~~~~y~~~~----~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~ 527 (609)
T KOG0200|consen 453 KN-KVIKIADFGLARDHYNKDYYRTKS----SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP 527 (609)
T ss_pred CC-CEEEEccccceeccCCCCceEecC----CCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence 99 589999999997654433222111 112 335999999999999999999999999999999 6777765221
Q ss_pred chhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 458 NRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 458 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
. ..+.. ...+|.. ...+..+...+.++++.||+.+|.+||++.++.+.|+.
T Consensus 528 ~-~~l~~----~l~~G~r---------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 528 T-EELLE----FLKEGNR---------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred H-HHHHH----HHhcCCC---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 2 12211 2222221 12233445677888999999999999999999998877
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=244.58 Aligned_cols=200 Identities=24% Similarity=0.359 Sum_probs=166.4
Q ss_pred CCceEcccCceEEEEEEe-cCCcEEEEEEeecCC--cCHHHHHHHHHHHh-cCCCCCeeeEEEEEEcCCeEEEEEeccCC
Q 008898 256 PKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN--WSEEEVLREVELLS-SIKHENIVRIIGYCHSKEMYAIVYNLLNG 331 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~--~~~~~~~~E~~il~-~l~h~nIv~l~~~~~~~~~~~lv~e~~~g 331 (549)
....||+|+||.|=+-++ .+|...|+|.+...- ...++.++|+++.. ....|++|.+||........++.||.|.-
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t 129 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT 129 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence 344599999999988877 679999999997553 33456788998755 45799999999998888999999999999
Q ss_pred CHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 332 SLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 332 sL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
||+.|.++ .++.-.-+|+.-+.+||.|||++. .|||||+||+|||++.+ |++|+||||.+-+..+
T Consensus 130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~-GqVKiCDFGIsG~L~d----- 201 (282)
T KOG0984|consen 130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYD-GQVKICDFGISGYLVD----- 201 (282)
T ss_pred hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccC-CcEEEcccccceeehh-----
Confidence 99988754 566777889999999999999985 89999999999999999 8999999999855333
Q ss_pred cCccccccccCCcccccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHH
Q 008898 405 ENVKPVNVVGTFGYLAPEYMMY----GKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVL 464 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~~----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~ 464 (549)
+...+...|.-.|||||.+.. ..|+-++||||||+.+.||.+++.|++......+.+.+
T Consensus 202 -SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 202 -SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred -hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 223333568889999998863 36999999999999999999999999988776555543
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=4e-31 Score=257.25 Aligned_cols=237 Identities=32% Similarity=0.424 Sum_probs=189.4
Q ss_pred CceEEEEEEec-CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEeccCC-CHHHHHHH
Q 008898 264 GNSKVYRTNHV-DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLLNG-SLKQYLKQ 339 (549)
Q Consensus 264 ~fg~Vy~~~~~-~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~g-sL~~~l~~ 339 (549)
+||.||++... +|+.+|+|++...... .+.+.+|++.++.++|+||+++++++......++++|++.+ +|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999875 5899999999765432 46788999999999999999999999998999999999955 99999865
Q ss_pred ---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCC
Q 008898 340 ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTF 416 (549)
Q Consensus 340 ---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~ 416 (549)
+++.....++.+++.++.|||+. +++|+||+|+||+++.+ +.++|+|||.+....... ......++.
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~-~~~~l~d~~~~~~~~~~~------~~~~~~~~~ 150 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDED-GHVKLADFGLARQLDPGG------LLTTFVGTP 150 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCC-CcEEEccccceeeecccc------ccccccCCc
Confidence 57788889999999999999999 99999999999999998 689999999986544321 223456888
Q ss_pred ccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHH
Q 008898 417 GYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVM 496 (549)
Q Consensus 417 ~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 496 (549)
.|++||.+.+..++.++||||||+++|+|++|..||........ ... ....... . . ..........+.
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-~~~---~~~~~~~-~----~---~~~~~~~~~~~~ 218 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-LFK---KIGKPKP-P----F---PPPEWKISPEAK 218 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHH---HHhccCC-C----C---ccccccCCHHHH
Confidence 99999999988899999999999999999999999976322211 111 1110000 0 0 000000345678
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhcCCchhh
Q 008898 497 CAARLCLLHSSSRRPTMKTLLKLFQEPDYWL 527 (549)
Q Consensus 497 ~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~ 527 (549)
+++.+|+..+|.+||++.++++ ++|+
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~-----~~~~ 244 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ-----HPFF 244 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh-----CCCC
Confidence 8899999999999999999998 6775
No 390
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=289.75 Aligned_cols=244 Identities=25% Similarity=0.405 Sum_probs=192.9
Q ss_pred CCCCceEcccCceEEEEEEe-cCC----cEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDG----QVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g----~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
....++||.|+||+||+|.+ ..| -+||+|++..... ...+++.|+-+|.+|.|||+++|+++|.... +.||.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 55677899999999999976 344 3789999865443 3578999999999999999999999998765 77888
Q ss_pred ecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 327 NLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 327 e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+|+ .|.|.+|++. +.....+.+..|||+||.|||.. .++||||-.+|||+... .++|++|||+|+......
T Consensus 777 q~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP-~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSP-NHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCC-CeEEEEecchhhccCccc
Confidence 888 7899999964 66677889999999999999988 99999999999999887 589999999998765422
Q ss_pred ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
.........-.+.|||-|.+....|+.++|||||||.+||++| |..|++....+. .. .+++.+.
T Consensus 853 ---~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e-----I~-dlle~ge------ 917 (1177)
T KOG1025|consen 853 ---KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE-----IP-DLLEKGE------ 917 (1177)
T ss_pred ---ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-----hh-HHHhccc------
Confidence 1112222223568999999999999999999999999999998 889987654322 11 1111211
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLF 520 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 520 (549)
.-..++-+...+..++.+||..|+..||+++++...+
T Consensus 918 ---RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 918 ---RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred ---cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 1223445566677888999999999999999987644
No 391
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=6.8e-31 Score=282.00 Aligned_cols=256 Identities=20% Similarity=0.246 Sum_probs=177.1
Q ss_pred hcCCCCCceEcccCceEEEEEEe-----------------cCCcEEEEEEeecCCcC-H--------------HHHHHHH
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-----------------VDGQVAAVKVLKCTNWS-E--------------EEVLREV 298 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-----------------~~g~~~AvK~l~~~~~~-~--------------~~~~~E~ 298 (549)
.++|.+.++||+|+||.||+|.. .+++.||||.++..... . +....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 57899999999999999999853 23568999998754321 1 1233467
Q ss_pred HHHhcCCCCCe-----eeEEEEEEc--------CCeEEEEEecc-CCCHHHHHHH-------------------------
Q 008898 299 ELLSSIKHENI-----VRIIGYCHS--------KEMYAIVYNLL-NGSLKQYLKQ------------------------- 339 (549)
Q Consensus 299 ~il~~l~h~nI-----v~l~~~~~~--------~~~~~lv~e~~-~gsL~~~l~~------------------------- 339 (549)
.++.+++|.++ ++++++|.. .+..++||||+ +|+|.+++..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777776654 667777743 35689999999 7889888742
Q ss_pred --hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCCc
Q 008898 340 --LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFG 417 (549)
Q Consensus 340 --~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~ 417 (549)
+.+..+..++.|+++||.|||+. +|+||||||+|||++.+ +.+||+|||++........ .......+|+.
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~-~~~kL~DFGla~~~~~~~~----~~~~~g~~tp~ 375 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVD-GQVKIIDFGAAVDMCTGIN----FNPLYGMLDPR 375 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCC-CcEEEEeCcCccccccCCc----cCccccCCCcc
Confidence 13445677899999999999999 99999999999999998 6899999999865432211 11112235889
Q ss_pred cccccccccCC--------------------C--CchhhHHHHHHHHHHHHcCCC-CCCCcccch-------hhHHHHHH
Q 008898 418 YLAPEYMMYGK--------------------V--DEKIDVYSYGVVLLELITGKE-AIQTNKANR-------ESLVLWAR 467 (549)
Q Consensus 418 y~APE~~~~~~--------------------~--~~k~DvwSlGvil~elltG~~-p~~~~~~~~-------~~l~~~~~ 467 (549)
|+|||.+.... | ..+.||||+||++|+|++|.. |+....... ..+..|..
T Consensus 376 Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~ 455 (507)
T PLN03224 376 YSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM 455 (507)
T ss_pred eeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh
Confidence 99999876432 1 234799999999999999975 664322111 11112211
Q ss_pred HhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHHhcCCchhhhh
Q 008898 468 SLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSS---SRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 468 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP---~~RPs~~evl~~L~~~~~w~~~ 529 (549)
... ...+-.. .........+++..||..+| .+|+|+.++++ |+||..
T Consensus 456 ~~~------~~~~~~~----~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~-----Hp~f~~ 505 (507)
T PLN03224 456 YKG------QKYDFSL----LDRNKEAGWDLACKLITKRDQANRGRLSVGQALS-----HRFFLP 505 (507)
T ss_pred hcc------cCCCccc----ccccChHHHHHHHHHhccCCCCcccCCCHHHHhC-----CCCcCC
Confidence 100 0011111 11223556777788888765 78999999999 999954
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=7.9e-32 Score=288.22 Aligned_cols=242 Identities=26% Similarity=0.359 Sum_probs=190.3
Q ss_pred CCCCceEcccCceE-EEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEEEEEcCCeEEEEEeccCC
Q 008898 254 FSPKMLIGQGGNSK-VYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIGYCHSKEMYAIVYNLLNG 331 (549)
Q Consensus 254 f~~~~~lG~G~fg~-Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~g 331 (549)
|...+++|.|+.|+ ||+|.. +|+.||||++-.+. ..-+.+|+..|+.- +|||||++|+.-.+....||..|+|..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~ 587 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC 587 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh
Confidence 55667899999985 699987 68899999886432 23467999999877 599999999999999999999999999
Q ss_pred CHHHHHHH--hch-----hHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEec---C-CCceEEeeeccccccccc
Q 008898 332 SLKQYLKQ--LKW-----NERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSE---N-FHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 332 sL~~~l~~--~~~-----~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~---~-~~~~kL~DFGla~~~~~~ 400 (549)
+|.++++. ... ...+.+..|+++||++||+. +||||||||.||||+. + ...++|+|||+++.....
T Consensus 588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 99999976 111 23466889999999999999 9999999999999986 2 136789999999876654
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCcccchhhHHHHHHHhhccccccccc
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITG-KEAIQTNKANRESLVLWARSLLSSGLCERLI 479 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 479 (549)
...- ....+..||-+|+|||++....-+.++|||||||++|+.++| .+||......+.++.. ....+..+
T Consensus 665 ~sS~--~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~------~~~~L~~L- 735 (903)
T KOG1027|consen 665 KSSF--SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT------GNYTLVHL- 735 (903)
T ss_pred cchh--hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc------Cccceeee-
Confidence 3222 235577899999999999998888999999999999999997 8999877655433211 01001111
Q ss_pred CCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 480 DPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 480 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
... .++ ...+||..|+.++|..||++.+|+.
T Consensus 736 -----~~~-~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 736 -----EPL-PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -----ccC-chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 111 111 6778999999999999999999997
No 393
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-31 Score=260.78 Aligned_cols=257 Identities=21% Similarity=0.266 Sum_probs=196.4
Q ss_pred HHHhhhcCCCCCceEcccCceEEEEEEec------CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEE
Q 008898 246 ELCHLTHNFSPKMLIGQGGNSKVYRTNHV------DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCH 317 (549)
Q Consensus 246 el~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~ 317 (549)
++..-..+++...++-+|.||+||+|.+. +.+.+.+|.++..... ...+..|.-.+..++|||+.++.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 34444567888889999999999999543 3456667777643322 234678999999999999999999985
Q ss_pred c-CCeEEEEEecc-CCCHHHHHHH-----------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC
Q 008898 318 S-KEMYAIVYNLL-NGSLKQYLKQ-----------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH 384 (549)
Q Consensus 318 ~-~~~~~lv~e~~-~gsL~~~l~~-----------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 384 (549)
+ ...-++++.++ -|+|..||.. .+..+...++.|++.|++|||+. +|||.||..+|++||+..
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~L- 433 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQL- 433 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhe-
Confidence 4 45666667777 5899999962 44566778999999999999999 999999999999999994
Q ss_pred ceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHH
Q 008898 385 HPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLV 463 (549)
Q Consensus 385 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~ 463 (549)
++||+|-.+++..-+.++---+ .+......||+||.+.+..|+.++|+|||||+||||+| |+.|+..-++...
T Consensus 434 qVkltDsaLSRDLFP~DYhcLG---DnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm--- 507 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLG---DNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM--- 507 (563)
T ss_pred eEEeccchhccccCcccccccC---CCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH---
Confidence 8999999998766554332111 11223557999999999999999999999999999998 8888876654321
Q ss_pred HHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 464 LWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 464 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
.-.+.+|. +-..+.++++.+..++..||+..|++||+++++..-|.+-|
T Consensus 508 ---~~ylkdGy---------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 508 ---EHYLKDGY---------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred ---HHHHhccc---------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 11222221 22235567888899999999999999999999998876533
No 394
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.3e-30 Score=258.12 Aligned_cols=267 Identities=23% Similarity=0.356 Sum_probs=200.0
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC-----C---CCeeeEEEEEE----c
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIK-----H---ENIVRIIGYCH----S 318 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~-----h---~nIv~l~~~~~----~ 318 (549)
.+|...++||.|-|++||++.. .+.+.||+|+.+....-.+..+.||.+|+++. | .+||+|++.|. .
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 6788999999999999999976 56789999999977655677889999999883 2 47999999985 4
Q ss_pred CCeEEEEEeccCCCHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC---------
Q 008898 319 KEMYAIVYNLLNGSLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH--------- 384 (549)
Q Consensus 319 ~~~~~lv~e~~~gsL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~--------- 384 (549)
+.+.++|+|+++.+|..+++. ++......|+.||+.||.|||..| ||||-||||+|||+..+..
T Consensus 158 G~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~~~a 235 (590)
T KOG1290|consen 158 GQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDAREA 235 (590)
T ss_pred CcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhhhhh
Confidence 568999999999999999965 777888999999999999999997 9999999999999943200
Q ss_pred --------------------------------------------------------------------------------
Q 008898 385 -------------------------------------------------------------------------------- 384 (549)
Q Consensus 385 -------------------------------------------------------------------------------- 384 (549)
T Consensus 236 ~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~~ 315 (590)
T KOG1290|consen 236 GEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNEST 315 (590)
T ss_pred ccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccccc
Confidence
Q ss_pred ----------------------------------------------------------------------------ceEE
Q 008898 385 ----------------------------------------------------------------------------HPQL 388 (549)
Q Consensus 385 ----------------------------------------------------------------------------~~kL 388 (549)
.+||
T Consensus 316 v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vKI 395 (590)
T KOG1290|consen 316 VERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVKI 395 (590)
T ss_pred hhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeEEE
Confidence 0122
Q ss_pred eeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCccc-----chhhHH
Q 008898 389 SDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKA-----NRESLV 463 (549)
Q Consensus 389 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~-----~~~~l~ 463 (549)
+|||-|.|.... .+.-+-|..|.|||++.+.+|+..+||||++|+++||.||...|+.... +.+.+.
T Consensus 396 aDlGNACW~~kh--------FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA 467 (590)
T KOG1290|consen 396 ADLGNACWVHKH--------FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA 467 (590)
T ss_pred eeccchhhhhhh--------hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence 222222221110 0122457889999999999999999999999999999999999875332 233333
Q ss_pred HHHHHhh-------cccc-cccccCC----------c-------cc--ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 008898 464 LWARSLL-------SSGL-CERLIDP----------Q-------LN--EEYNREEIEIVMCAARLCLLHSSSRRPTMKTL 516 (549)
Q Consensus 464 ~~~~~~~-------~~~~-~~~~~d~----------~-------l~--~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev 516 (549)
...+.+. ..|. -.++.+. . +. -.++.++...+.+++.-||..+|++|||+.++
T Consensus 468 ~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~c 547 (590)
T KOG1290|consen 468 LIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQC 547 (590)
T ss_pred HHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHH
Confidence 3332221 1111 1111111 0 11 23466788889999999999999999999999
Q ss_pred HHHhcCCchhhhhhhHH
Q 008898 517 LKLFQEPDYWLKMKREK 533 (549)
Q Consensus 517 l~~L~~~~~w~~~~~~~ 533 (549)
++ |+|+......
T Consensus 548 l~-----hPwLn~~~~~ 559 (590)
T KOG1290|consen 548 LK-----HPWLNPVAGP 559 (590)
T ss_pred hc-----CccccCCCCC
Confidence 99 9999855543
No 395
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=7.6e-31 Score=267.08 Aligned_cols=270 Identities=24% Similarity=0.310 Sum_probs=205.0
Q ss_pred CHHHHHhhhcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC------CCCeeeEEEE
Q 008898 243 TSQELCHLTHNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIK------HENIVRIIGY 315 (549)
Q Consensus 243 ~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~------h~nIv~l~~~ 315 (549)
.+.--..+..+|.+....|+|-|+.|.+|.. ..|+.||||+|.....-.+.=+.|++||++|+ --|+++|+..
T Consensus 423 rv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 423 RVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred EEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 3333344567888888999999999999976 45889999999865543345568999999996 2478999999
Q ss_pred EEcCCeEEEEEeccCCCHHHHHHH------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEe
Q 008898 316 CHSKEMYAIVYNLLNGSLKQYLKQ------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLS 389 (549)
Q Consensus 316 ~~~~~~~~lv~e~~~gsL~~~l~~------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~ 389 (549)
|...+++|+|+|.+.-+|.+.|+. +.......++.|+.-||..|... +|+|.||||+|||+++....+|||
T Consensus 503 F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLC 579 (752)
T KOG0670|consen 503 FKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLC 579 (752)
T ss_pred hhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeec
Confidence 999999999999999999999987 44556778999999999999998 999999999999999887789999
Q ss_pred eeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHH--
Q 008898 390 DFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWAR-- 467 (549)
Q Consensus 390 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~-- 467 (549)
|||.|.......- +...-+..|.|||++.|-.|+...|+||.||.||||.||+-.|.+...++.. ..++.
T Consensus 580 DfGSA~~~~enei-------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML-rl~me~K 651 (752)
T KOG0670|consen 580 DFGSASFASENEI-------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML-RLFMELK 651 (752)
T ss_pred cCccccccccccc-------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH-HHHHHhc
Confidence 9999966443211 1112234699999999999999999999999999999999999887755432 11111
Q ss_pred -----Hhhcccc-cc--------------------------cccCC------ccc--ccCCH---HHHHHHHHHHHHhcc
Q 008898 468 -----SLLSSGL-CE--------------------------RLIDP------QLN--EEYNR---EEIEIVMCAARLCLL 504 (549)
Q Consensus 468 -----~~~~~~~-~~--------------------------~~~d~------~l~--~~~~~---~~~~~l~~li~~Cl~ 504 (549)
.++..+. .. ..+.| .+. ..++. .....+.+|+..||.
T Consensus 652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~ 731 (752)
T KOG0670|consen 652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI 731 (752)
T ss_pred CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence 1111110 00 01111 000 11222 334567889999999
Q ss_pred cCCCCCCCHHHHHHHhcCCchhhh
Q 008898 505 HSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 505 ~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
.||++|.|..+.|+ |+||.
T Consensus 732 LdP~KRit~nqAL~-----HpFi~ 750 (752)
T KOG0670|consen 732 LDPEKRITVNQALK-----HPFIT 750 (752)
T ss_pred cChhhcCCHHHHhc-----CCccc
Confidence 99999999999998 77764
No 396
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=1.4e-29 Score=253.85 Aligned_cols=278 Identities=23% Similarity=0.325 Sum_probs=211.0
Q ss_pred HHHhhhcCCCCCceEcccCceEEEEEEe-c---CCcEEEEEEeecCCcCHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCC
Q 008898 246 ELCHLTHNFSPKMLIGQGGNSKVYRTNH-V---DGQVAAVKVLKCTNWSEEEVLREVELLSSIK-HENIVRIIGYCHSKE 320 (549)
Q Consensus 246 el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~---~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~ 320 (549)
.+..+.+.|..+++||+|.|+.||++.. . ..+.+|+|.+.... ....+..|+++|..+. +.||+++.+++..++
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3445667899999999999999999955 2 46799999987543 3467899999999995 999999999999999
Q ss_pred eEEEEEecc-CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 321 MYAIVYNLL-NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
...+|++|+ ..+..+++..++..++..++..+..||.++|.+ |||||||||+|+|.+...+.-.|.|||+|.....
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHHh
Confidence 999999999 567899999999999999999999999999999 9999999999999998877788999999973111
Q ss_pred cc------c---------------------------------cccCccccccccCCcccccccccc-CCCCchhhHHHHH
Q 008898 400 SH------Q---------------------------------VSENVKPVNVVGTFGYLAPEYMMY-GKVDEKIDVYSYG 439 (549)
Q Consensus 400 ~~------~---------------------------------~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlG 439 (549)
.. . ...........||++|.|||++.. ..-+.++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 00 0 000011124679999999999874 4578999999999
Q ss_pred HHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc---------c--ccc---------------ccC-Ccccc-------
Q 008898 440 VVLLELITGKEAIQTNKANRESLVLWARSLLSSG---------L--CER---------------LID-PQLNE------- 485 (549)
Q Consensus 440 vil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~---------~--~~~---------------~~d-~~l~~------- 485 (549)
||++-+++++.||-....+-+.+.+.+....... . +.+ -++ ..+..
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 9999999999999776655554444332221111 1 000 000 00000
Q ss_pred --cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhH
Q 008898 486 --EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKRE 532 (549)
Q Consensus 486 --~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~ 532 (549)
....-.+..+++++.+|+..||.+|.|+++.|+ |++|....+
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk-----HpFF~~~~~ 389 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDALK-----HPFFDEADR 389 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhcccHHHHhc-----CcCCcchhh
Confidence 001112237889999999999999999999999 888875443
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1e-29 Score=261.92 Aligned_cols=191 Identities=23% Similarity=0.402 Sum_probs=165.9
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHH---------HHHHHHHHHhcCC---CCCeeeEEEEEEc
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEE---------EVLREVELLSSIK---HENIVRIIGYCHS 318 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~---------~~~~E~~il~~l~---h~nIv~l~~~~~~ 318 (549)
.+|...+.+|+|+||.|++|.+ .+...|+||.+.++..-.+ .+-.|+.||..|+ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 4588889999999999999987 4567899999987653322 2456999999997 9999999999999
Q ss_pred CCeEEEEEeccC-C-CHHHHHH---HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecc
Q 008898 319 KEMYAIVYNLLN-G-SLKQYLK---QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGA 393 (549)
Q Consensus 319 ~~~~~lv~e~~~-g-sL~~~l~---~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGl 393 (549)
++.|||++|.-+ | +|++++. ++.+.+...|+.||+.|+++||.. +|||||||-+|+.++.+ |.+||+|||.
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~-g~~klidfgs 716 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSN-GFVKLIDFGS 716 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecC-CeEEEeeccc
Confidence 999999999873 3 7999995 488889999999999999999999 99999999999999999 8999999999
Q ss_pred ccccccccccccCccccccccCCccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCC
Q 008898 394 AMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKV-DEKIDVYSYGVVLLELITGKEAIQ 453 (549)
Q Consensus 394 a~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~ 453 (549)
|.+.. +.....++||..|.|||++.|.+| +..-|||++|++||-++....||.
T Consensus 717 aa~~k-------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 717 AAYTK-------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhhc-------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 86533 334457899999999999999988 567899999999999999888875
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-29 Score=244.64 Aligned_cols=257 Identities=23% Similarity=0.311 Sum_probs=194.7
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEc------CCe
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHS------KEM 321 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~~~ 321 (549)
.+|...+.+|.|.- .|..+.. ..++.+|+|.+.... ...+...+|...+..++|+||++++.+|.- -..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777778899988 5555533 568899999875332 223567899999999999999999998842 347
Q ss_pred EEEEEeccCCCHHHHHH-HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc
Q 008898 322 YAIVYNLLNGSLKQYLK-QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS 400 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~-~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~ 400 (549)
+|+|||+|.++|.+.+. +++-.....+++|+++|++|||+. +|+||||||+||++..+ ..+||.|||+|+.....
T Consensus 96 ~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~-~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 96 VYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSD-CTLKILDFGLARTEDTD 171 (369)
T ss_pred HHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecch-hheeeccchhhcccCcc
Confidence 89999999999998875 355666778999999999999999 99999999999999999 58999999999643322
Q ss_pred cccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccccc-----
Q 008898 401 HQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLC----- 475 (549)
Q Consensus 401 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~----- 475 (549)
...+..+.|..|.|||++.+..|.+.+||||+||++.||++|.-.|.+.. .+.+|.+.....|..
T Consensus 172 ------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d----~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 172 ------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD----HIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred ------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch----HHHHHHHHHHHhcCCCHHHH
Confidence 34456678999999999999889999999999999999999998887432 233333332222211
Q ss_pred -----------------------ccccCCcccc--cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhh
Q 008898 476 -----------------------ERLIDPQLNE--EYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLK 528 (549)
Q Consensus 476 -----------------------~~~~d~~l~~--~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~ 528 (549)
..+.|..... ..+.-......+++.+||-.||++|.+++++|+ |++++
T Consensus 242 ~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~-----HPY~~ 314 (369)
T KOG0665|consen 242 KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR-----HPYIK 314 (369)
T ss_pred HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc-----CCeee
Confidence 0111111111 011123355778889999999999999999999 77665
No 399
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-30 Score=247.70 Aligned_cols=263 Identities=23% Similarity=0.341 Sum_probs=191.2
Q ss_pred cCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCC---cCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCC-----eE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTN---WSEEEVLREVELLSSIKHENIVRIIGYCHSKE-----MY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~ 322 (549)
.+.++.+.||-|+||.||.+.+ .+|+.+|+|.+..-. .+.+.+.+|+.+|..++|.|++..+++.+-.. .+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 3567888999999999999976 789999999886432 23467899999999999999999887664432 46
Q ss_pred EEEEeccCCCHHHHH---HHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 323 AIVYNLLNGSLKQYL---KQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 323 ~lv~e~~~gsL~~~l---~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
|++.|++..+|...+ +.++.....-+.+||++||.|||+. +|.||||||.|.|+++|. .+||||||+|+....
T Consensus 133 YV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNC-vLKICDFGLARvee~ 208 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNC-ILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCc-eEEecccccccccch
Confidence 677788888888887 3477777888999999999999999 999999999999999994 899999999976543
Q ss_pred ccccccCccccccccCCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcc------
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSS------ 472 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~------ 472 (549)
.. ....+..+-|-.|.|||+++|.. |+.++||||.|||+.||+..+-.|+...+.+ .+.+....+.-.
T Consensus 209 d~----~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Piq-QL~lItdLLGTPs~EaMr 283 (449)
T KOG0664|consen 209 RD----RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIE-QLQMIIDLLGTPSQEAMK 283 (449)
T ss_pred hh----hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHH-HHHHHHHHhCCCcHHHHH
Confidence 21 11122334578999999999864 8999999999999999999998888766522 222221111100
Q ss_pred ----cccc-----cccCCcccccC---C-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 008898 473 ----GLCE-----RLIDPQLNEEY---N-REEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEP 523 (549)
Q Consensus 473 ----~~~~-----~~~d~~l~~~~---~-~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~ 523 (549)
|... ....|.+.--| + ...-...+.+...++..||+.|.+..+.+..+..+
T Consensus 284 ~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 284 YACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred HHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 0000 00111111000 1 11123345567789999999999999988755433
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.1e-27 Score=226.90 Aligned_cols=204 Identities=36% Similarity=0.571 Sum_probs=177.2
Q ss_pred EcccCceEEEEEEec-CCcEEEEEEeecCCcC--HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEeccC-CCHHH
Q 008898 260 IGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWS--EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLLN-GSLKQ 335 (549)
Q Consensus 260 lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~-gsL~~ 335 (549)
||+|++|.||++... +++.+++|++...... ...+.+|+.+++.+.|++++++++++......++++|++. ++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999874 4899999999866542 4678899999999999999999999999899999999996 89999
Q ss_pred HHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEec-CCCceEEeeeccccccccccccccCcccc
Q 008898 336 YLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSE-NFHHPQLSDFGAAMVHHQSHQVSENVKPV 410 (549)
Q Consensus 336 ~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 410 (549)
++.. +++..+..++.+++.+|.|||+. +++|+||+|.||+++. + +.++|+|||.+........ ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~-~~~~l~d~~~~~~~~~~~~-----~~~ 151 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDN-GKVKLADFGLSKLLTSDKS-----LLK 151 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCC-CcEEEecCCceEEccCCcc-----hhh
Confidence 9864 57788899999999999999999 9999999999999998 6 6899999999865443211 122
Q ss_pred ccccCCccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCH
Q 008898 411 NVVGTFGYLAPEYMMYG-KVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNR 489 (549)
Q Consensus 411 ~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 489 (549)
...+...|++||.+... .++.+.|+|++|+++++|
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 34578899999998877 788999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008898 490 EEIEIVMCAARLCLLHSSSRRPTMKTLLKL 519 (549)
Q Consensus 490 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 519 (549)
..+.+++..|+..+|.+||++.++++.
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 457788899999999999999999874
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.9e-29 Score=235.40 Aligned_cols=251 Identities=20% Similarity=0.299 Sum_probs=190.8
Q ss_pred hhhcCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeeeEEE-EEEcCCeEEEE
Q 008898 249 HLTHNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVRIIG-YCHSKEMYAIV 325 (549)
Q Consensus 249 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~-~~~~~~~~~lv 325 (549)
.+.+.|.+.+.||+|.||++.+++|. +...+++|.+........+|.+|...--.| .|.||+.-|+ .|++.+.|+++
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 34567899999999999999999984 477899999988777888999998865555 4899998775 56788899999
Q ss_pred Eecc-CCCHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEE-ecCCCceEEeeecccccccccc
Q 008898 326 YNLL-NGSLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILL-SENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl-~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+||+ .|+|...+.. +.+.....++.|++.|+.|+|++ +++|||||.+|||| +.|+..+||||||+......
T Consensus 101 qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~-- 175 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT-- 175 (378)
T ss_pred eccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc--
Confidence 9999 7999988854 55666678999999999999999 99999999999998 56667899999999743222
Q ss_pred ccccCccccccccCCcccccccccc---CC--CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 402 QVSENVKPVNVVGTFGYLAPEYMMY---GK--VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 402 ~~~~~~~~~~~~gt~~y~APE~~~~---~~--~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
.......+..|.|||.... +. .++.+|+|.||+++|.+|||..||+.....+.....|.........
T Consensus 176 ------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-- 247 (378)
T KOG1345|consen 176 ------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-- 247 (378)
T ss_pred ------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc--
Confidence 2222334567999997653 22 4788999999999999999999999655555555555554433221
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.-|.....+ .+.++.+.++-+.++|.+|=-+.+..+
T Consensus 248 --~~P~~F~~f----s~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 248 --ALPKKFNPF----SEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred --cCchhhccc----CHHHHHHHHHhcCCcccccchhHHHHH
Confidence 112222222 345566778899999999954444443
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=3.5e-29 Score=261.83 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=200.7
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
.++|.....+|.|.||.|||+++ ..++..|+|+++..... ..-+..|+-+++..+||||+.++|.+-..+.+++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 46789999999999999999977 67999999999976533 34567899999999999999999999999999999999
Q ss_pred c-CCCHHHHHH---HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccc
Q 008898 329 L-NGSLKQYLK---QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVS 404 (549)
Q Consensus 329 ~-~gsL~~~l~---~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~ 404 (549)
| +|+|.+... .+++.++..++...++||.|||+. +=+|||||-.|||+++. |.+||+|||.+... ..
T Consensus 94 cgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~-gDvklaDfgvsaqi-----ta 164 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDE-GDVKLADFGVSAQI-----TA 164 (829)
T ss_pred cCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC---Ccccccccccceeeccc-CceeecccCchhhh-----hh
Confidence 9 568877653 377778888999999999999999 99999999999999999 79999999987322 23
Q ss_pred cCccccccccCCccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCC
Q 008898 405 ENVKPVNVVGTFGYLAPEYMM---YGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDP 481 (549)
Q Consensus 405 ~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 481 (549)
.-.+...+.||+.|||||+.. .+.|+..+|||++|+...|+---++|.....+.+..+.+ .+ ...+|
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm-Tk---------S~~qp 234 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM-TK---------SGFQP 234 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh-hc---------cCCCC
Confidence 334556789999999999864 567999999999999999998888887776665543322 11 11122
Q ss_pred cccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 482 QLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 482 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.-.. -.....+.+-++++.|+..+|.+|||++.+++
T Consensus 235 p~lk-Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 235 PTLK-DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred Cccc-CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111 12344567888899999999999999998887
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=3.3e-28 Score=278.87 Aligned_cols=203 Identities=18% Similarity=0.214 Sum_probs=143.6
Q ss_pred cCCC-CCeeeEEEEE-------EcCCeEEEEEeccCCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEe
Q 008898 303 SIKH-ENIVRIIGYC-------HSKEMYAIVYNLLNGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHR 370 (549)
Q Consensus 303 ~l~h-~nIv~l~~~~-------~~~~~~~lv~e~~~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHr 370 (549)
.++| +||.+++++| ...+.+++++|+++++|.+++.. +++.+.+.++.||++||.|||++ +|+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Ceeec
Confidence 4455 5778888877 33457888899999999999953 77888999999999999999999 99999
Q ss_pred cCCCCCEEEecC------------------CCceEEeeeccccccccccc-----c------ccCccccccccCCccccc
Q 008898 371 DVKSSNILLSEN------------------FHHPQLSDFGAAMVHHQSHQ-----V------SENVKPVNVVGTFGYLAP 421 (549)
Q Consensus 371 Dlkp~NILl~~~------------------~~~~kL~DFGla~~~~~~~~-----~------~~~~~~~~~~gt~~y~AP 421 (549)
||||+||||+.. .+.+|++|||+++....... . ..........||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 999999999643 13456666666543211000 0 000011224689999999
Q ss_pred cccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHH
Q 008898 422 EYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARL 501 (549)
Q Consensus 422 E~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~ 501 (549)
|++.+..|+.++|||||||+||||++|.+|+..... ....+... ...+... ........++..
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~---------~~~~~~~-----~~~~~~~~~~~~ 247 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHR---------VLPPQIL-----LNWPKEASFCLW 247 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHh---------hcChhhh-----hcCHHHHHHHHH
Confidence 999999999999999999999999999888653221 11111110 1111110 112234567788
Q ss_pred hcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 502 CLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 502 Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
||.++|.+||++.++++ |+|+...
T Consensus 248 ~L~~~P~~Rps~~eil~-----h~~~~~~ 271 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQ-----SEFINEP 271 (793)
T ss_pred hCCCChhhCcChHHHhh-----chhhhhh
Confidence 99999999999999998 8998653
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.3e-26 Score=223.56 Aligned_cols=193 Identities=37% Similarity=0.514 Sum_probs=165.6
Q ss_pred CCCCceEcccCceEEEEEEecC-CcEEEEEEeecCCc--CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEeccC
Q 008898 254 FSPKMLIGQGGNSKVYRTNHVD-GQVAAVKVLKCTNW--SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLLN 330 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~~-g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 330 (549)
|...+.||.|++|.||++.+.+ ++.+|+|.+..... ..+.+.+|++.++.++|+|++++++++...+..++++|++.
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567789999999999998854 88999999986554 34678899999999999999999999999899999999995
Q ss_pred C-CHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccccc
Q 008898 331 G-SLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSE 405 (549)
Q Consensus 331 g-sL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~ 405 (549)
+ +|.+++.. +++.....++.+++.++.|||+. +++|+||+|.||+++.+ +.++|+|||.+.......
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~-~~~~l~d~g~~~~~~~~~---- 152 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMD-GLVKLADFGLARFIHRDL---- 152 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC-CCEEEeeCceeeEecCcc----
Confidence 5 99999865 67777889999999999999999 99999999999999998 689999999986654321
Q ss_pred CccccccccCCcccccccc-ccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 008898 406 NVKPVNVVGTFGYLAPEYM-MYGKVDEKIDVYSYGVVLLELITGKEAIQT 454 (549)
Q Consensus 406 ~~~~~~~~gt~~y~APE~~-~~~~~~~k~DvwSlGvil~elltG~~p~~~ 454 (549)
........++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0122345678899999998 666788899999999999999999999965
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=1.3e-25 Score=209.76 Aligned_cols=165 Identities=22% Similarity=0.235 Sum_probs=124.3
Q ss_pred CCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccC
Q 008898 331 GSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 331 gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~ 406 (549)
|+|.+++.. +++.+++.++.||+.||.|||+. + ||+|||++.+ +.+++ ||++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~-~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWD-GLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCc-cceee--ccceEeeccc------
Confidence 789999863 78899999999999999999998 5 9999999998 68888 9998654321
Q ss_pred ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCccccc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEE 486 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 486 (549)
...||+.|||||++.+..++.++|||||||++|||++|+.||.........+..+....... ++.. ..
T Consensus 63 ----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~ 130 (176)
T smart00750 63 ----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD-------DPRD-RS 130 (176)
T ss_pred ----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC-------Cccc-cc
Confidence 12589999999999999999999999999999999999999976543222222222211110 0000 01
Q ss_pred CCHHHHH--HHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhh
Q 008898 487 YNREEIE--IVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMK 530 (549)
Q Consensus 487 ~~~~~~~--~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~ 530 (549)
....... .+.+++..||..+|.+||++.++++ |.|+...
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~-----~~~~~~~ 171 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLA-----HCRALFA 171 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHH-----HHHHHHH
Confidence 1122222 5889999999999999999999999 5565543
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.6e-23 Score=212.83 Aligned_cols=256 Identities=21% Similarity=0.228 Sum_probs=190.0
Q ss_pred CCCCCceEcccCceEEEEEEecC--CcEEEEEEeecCCcC-HHHHHHHHHHHhcCCC----CCeeeEEEEE-EcCCeEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVD--GQVAAVKVLKCTNWS-EEEVLREVELLSSIKH----ENIVRIIGYC-HSKEMYAI 324 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~--g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h----~nIv~l~~~~-~~~~~~~l 324 (549)
+|.+.+.||+|+||.||.+.... ...+|+|+....... ...+..|..++..+.. +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999998744 358899988754322 1267789999888863 6889999888 57888999
Q ss_pred EEeccCCCHHHHHH-----HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC----CceEEeeecccc
Q 008898 325 VYNLLNGSLKQYLK-----QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF----HHPQLSDFGAAM 395 (549)
Q Consensus 325 v~e~~~gsL~~~l~-----~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~----~~~kL~DFGla~ 395 (549)
||+.++.+|.++.. +++..+.+.++.|++.+|++||+. |++||||||+|+++.... ..+.|.|||+|+
T Consensus 99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 99999999999883 477888999999999999999999 999999999999997542 358999999997
Q ss_pred ccc--ccccc--ccC-ccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhh
Q 008898 396 VHH--QSHQV--SEN-VKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLL 470 (549)
Q Consensus 396 ~~~--~~~~~--~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~ 470 (549)
... ..... ... .....+.||..|.++....+...+.+-|+||++.++.||+.|..||........ ........
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~- 253 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDP- 253 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHh-
Confidence 322 11111 111 112356799999999999999999999999999999999999999976553221 11111111
Q ss_pred cccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 471 SSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 471 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
....... +....+..+.++...+-..+...+|....+...|++
T Consensus 254 ----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 254 ----RKLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKD 296 (322)
T ss_pred ----hhhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence 0011110 111223344445555666899999999999887644
No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.2e-24 Score=238.47 Aligned_cols=262 Identities=21% Similarity=0.249 Sum_probs=196.3
Q ss_pred CCCceEcccCceEEEEEEe-cCCcEEEEEEeec---CCcCHH----HHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 255 SPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKC---TNWSEE----EVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 255 ~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~---~~~~~~----~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
....++|.|++|.|+.... .....++.|.... ...... .+..|..+-..++|||++..+..+.+.....-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 3567899999998877754 3444455554331 111111 2556888888999999988877776666666669
Q ss_pred eccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc
Q 008898 327 NLLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV 403 (549)
Q Consensus 327 e~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~ 403 (549)
||+.++|..++.. +...++..++.|++.|+.|||.. ||.|||+|++|++++.+ +.+||+|||.+.++......
T Consensus 401 E~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~-g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 401 EYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTEN-GILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred hcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecC-CceEEeecCcceeeccCcch
Confidence 9997799999855 77788888999999999999999 99999999999999999 69999999999776543221
Q ss_pred ccCccccccccCCccccccccccCCCCc-hhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCc
Q 008898 404 SENVKPVNVVGTFGYLAPEYMMYGKVDE-KIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQ 482 (549)
Q Consensus 404 ~~~~~~~~~~gt~~y~APE~~~~~~~~~-k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 482 (549)
.......++|+..|+|||++.+..|++ ..||||.|+++..|.+|+.||......+..+. .. ......-...
T Consensus 477 -~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~----~~---~~~~~~~~~~ 548 (601)
T KOG0590|consen 477 -NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK----TN---NYSDQRNIFE 548 (601)
T ss_pred -hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh----hh---cccccccccc
Confidence 124455789999999999999999975 68999999999999999999987766544320 00 0011111111
Q ss_pred ccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHH
Q 008898 483 LNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREK 533 (549)
Q Consensus 483 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~ 533 (549)
-........+.....++..||+.||.+|.|+.+|++ .+|++....+
T Consensus 549 ~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~-----d~W~~~i~~c 594 (601)
T KOG0590|consen 549 GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN-----DEWIRSIECC 594 (601)
T ss_pred ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh-----ChHhhhcceE
Confidence 112234466777888999999999999999999999 7999876543
No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90 E-value=6.6e-22 Score=198.74 Aligned_cols=254 Identities=29% Similarity=0.406 Sum_probs=190.2
Q ss_pred CCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCC-CeeeEEEEEEcCCeEEEEEec
Q 008898 254 FSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHE-NIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~-nIv~l~~~~~~~~~~~lv~e~ 328 (549)
|.....||.|+||.||++... ..+++|.+...... ...+.+|+.+++.+.|+ +++++++++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566778999999999999876 78899999765432 45688999999999988 799999999877778999999
Q ss_pred c-CCCHHHHHH------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc
Q 008898 329 L-NGSLKQYLK------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH 401 (549)
Q Consensus 329 ~-~gsL~~~l~------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~ 401 (549)
+ ++++.+++. .+.......++.|++.++.|+|+. +++|||+||+||+++.....++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 9 567887775 366677888999999999999999 999999999999999883269999999987443322
Q ss_pred ccccC-ccccccccCCcccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCcccc---hhhHHHHHHHhhcccc
Q 008898 402 QVSEN-VKPVNVVGTFGYLAPEYMMY---GKVDEKIDVYSYGVVLLELITGKEAIQTNKAN---RESLVLWARSLLSSGL 474 (549)
Q Consensus 402 ~~~~~-~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~---~~~l~~~~~~~~~~~~ 474 (549)
..... .......||..|+|||.+.+ ..++...|+||+|++++++++|..||...... ...... +.....
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~ 232 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKI----ILELPT 232 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHH----HHhcCC
Confidence 11111 13456789999999999987 57889999999999999999999997665531 111111 111110
Q ss_pred cccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 475 CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 475 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
. .................+.+++..|+..+|..|.+..+...
T Consensus 233 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 233 P--SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred c--ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 0 00000000000222356778889999999999999998776
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.2e-23 Score=215.29 Aligned_cols=167 Identities=18% Similarity=0.182 Sum_probs=127.0
Q ss_pred hhhcCCCCCceEcccCceEEEEEEec--CCcEEEEEEeecCC------cCHHHHHHHHHHHhcCCCCCeee-EEEEEEcC
Q 008898 249 HLTHNFSPKMLIGQGGNSKVYRTNHV--DGQVAAVKVLKCTN------WSEEEVLREVELLSSIKHENIVR-IIGYCHSK 319 (549)
Q Consensus 249 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~g~~~AvK~l~~~~------~~~~~~~~E~~il~~l~h~nIv~-l~~~~~~~ 319 (549)
.+.++|...+.||+|+||+||+|.+. +++.+|||++.... .....+.+|+++|+.++|+|+++ ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 34578999999999999999999763 57888999875321 11345889999999999999985 4432
Q ss_pred CeEEEEEecc-CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecC-CCCCEEEecCCCceEEeeecccccc
Q 008898 320 EMYAIVYNLL-NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDV-KSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 320 ~~~~lv~e~~-~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDl-kp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
+..+++|||+ +++|.. +... ....++.++++||.|||+. ||+|||| ||+|||++.+ +.++|+|||+|...
T Consensus 91 ~~~~LVmE~~~G~~L~~-~~~~---~~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~-~~ikLiDFGlA~~~ 162 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL-ARPH---GDPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPD-GEAAVIDFQLASVF 162 (365)
T ss_pred CCcEEEEEccCCCCHHH-hCcc---chHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCC-CCEEEEECccceec
Confidence 4579999999 556752 2211 1256788999999999999 9999999 9999999887 68999999999866
Q ss_pred cccccccc---CccccccccCCccccccccccC
Q 008898 398 HQSHQVSE---NVKPVNVVGTFGYLAPEYMMYG 427 (549)
Q Consensus 398 ~~~~~~~~---~~~~~~~~gt~~y~APE~~~~~ 427 (549)
........ .....+..+++.|+|||.+...
T Consensus 163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 54321111 1122467899999999998643
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.9e-22 Score=187.64 Aligned_cols=258 Identities=21% Similarity=0.235 Sum_probs=188.7
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCC-CCeeeEEEEEEcCCeEEEEEec
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIKH-ENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h-~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
...|...+.||.|+||.+|.|.. .+|..||||+-.... ...++..|..+.+.|++ ..|..+..|..+...-.+||++
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 45799999999999999999977 679999999865432 33567889999999975 6777888888899999999999
Q ss_pred cCCCHHHHH----HHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC--CCceEEeeeccccccccccc
Q 008898 329 LNGSLKQYL----KQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN--FHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 329 ~~gsL~~~l----~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~~kL~DFGla~~~~~~~~ 402 (549)
++.+|++.+ +.++..+.+.++-|++.-++|+|.. ++|||||||+|+|..-+ ...+.|+|||+|+.......
T Consensus 93 LGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 93 LGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred cCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 999988877 4578888899999999999999999 99999999999998643 23578999999976544321
Q ss_pred cc--cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccC
Q 008898 403 VS--ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLID 480 (549)
Q Consensus 403 ~~--~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 480 (549)
.. .........||..|.+--...+..-+..-|+-|+|.+|..+.-|..||++...... .+-.+.+.+.. ..-. -
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk--~QKyEkI~EkK-~s~~-i 245 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK--KQKYEKISEKK-MSTP-I 245 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH--HHHHHHHHHhh-cCCC-H
Confidence 11 11122356899999988877777788999999999999999999999998765221 01111111110 0000 0
Q ss_pred CcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 008898 481 PQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLF 520 (549)
Q Consensus 481 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 520 (549)
..+-..++. .+.-.+..|-..--++-|...-+-+++
T Consensus 246 e~LC~G~P~----EF~myl~Y~R~L~F~E~Pdy~ylrqlF 281 (341)
T KOG1163|consen 246 EVLCKGFPA----EFAMYLNYCRGLGFEEKPDYMYLRQLF 281 (341)
T ss_pred HHHhCCCcH----HHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence 111223333 344445678777777778766554443
No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=8.8e-22 Score=192.05 Aligned_cols=201 Identities=18% Similarity=0.263 Sum_probs=167.4
Q ss_pred CCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEEeccC
Q 008898 253 NFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWSEEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVYNLLN 330 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~ 330 (549)
.|.+.+.||+|+||..+.|.. -+++.||||.-.. .....++..|....+.|. .++|...|-|-.++-.-.+|+|+++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG 107 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG 107 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC
Confidence 699999999999999999965 7899999996542 223356788998888885 6899988888888888999999999
Q ss_pred CCHHHHH----HHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC----CCceEEeeeccccccccccc
Q 008898 331 GSLKQYL----KQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN----FHHPQLSDFGAAMVHHQSHQ 402 (549)
Q Consensus 331 gsL~~~l----~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~----~~~~kL~DFGla~~~~~~~~ 402 (549)
.||++.+ ++++..+...+|.|++.-++|+|++ .+|+|||||+|+||... ...+.++|||+|+.......
T Consensus 108 PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 108 PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 9988877 4688899999999999999999999 99999999999999632 23578999999976544321
Q ss_pred cc--cCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCccc
Q 008898 403 VS--ENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKA 457 (549)
Q Consensus 403 ~~--~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~ 457 (549)
.. .-.......||.+||+--..++.+-+..-|+-|||=++..+|-|..||+....
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 11 11122356799999999999999999999999999999999999999998765
No 412
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=8.6e-22 Score=216.42 Aligned_cols=251 Identities=20% Similarity=0.210 Sum_probs=177.0
Q ss_pred CCCCCceEcccCceEEEEEEecCCcEEEEEEeecCC--cCHHHH---HHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEe
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTN--WSEEEV---LREVELLSSIKHENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~--~~~~~~---~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e 327 (549)
+|...+.||.+.|=+|.++++..|. ++||++-+.. .+...+ .+|++ ...++|||++++.-+..++.-.|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667788999999999999988887 8899985443 233333 44555 566789999999888888888889999
Q ss_pred ccCCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc-ccc
Q 008898 328 LLNGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS-HQV 403 (549)
Q Consensus 328 ~~~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~-~~~ 403 (549)
|...+|++.+.. +...+..-|+.|++.||..+|.. ||+|+|||.+||||+.- ..+.|+||..-+...-. +..
T Consensus 102 yvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSW-NW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 102 YVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSW-NWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeee-chhhhhcccccCCccCCCCCc
Confidence 999999999965 44556677999999999999999 99999999999999988 58999999765332111 100
Q ss_pred ccC-ccccccccCCccccccccccC----------C-CCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhh
Q 008898 404 SEN-VKPVNVVGTFGYLAPEYMMYG----------K-VDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLL 470 (549)
Q Consensus 404 ~~~-~~~~~~~gt~~y~APE~~~~~----------~-~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~ 470 (549)
.+. ....+-..-.+|+|||.|... . .+++.||||+||+++||++ |++||.-. ++..+. -.
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr--~~ 250 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYR--SG 250 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHh--cc
Confidence 000 001111223479999988642 1 5678999999999999988 68887421 111110 00
Q ss_pred cccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCc
Q 008898 471 SSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPD 524 (549)
Q Consensus 471 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 524 (549)
.....+..+... +-..+..++..|++.||.+|.++++.|+.-.+.-
T Consensus 251 ~~~~~e~~Le~I--------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 251 NADDPEQLLEKI--------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred CccCHHHHHHhC--------cCccHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 000111110000 0124677889999999999999999999766654
No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=6e-22 Score=208.46 Aligned_cols=226 Identities=24% Similarity=0.294 Sum_probs=176.2
Q ss_pred EcccCceEEEEEEe----cCCcEEEEEEeecCCcCH---HHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEEecc-C
Q 008898 260 IGQGGNSKVYRTNH----VDGQVAAVKVLKCTNWSE---EEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVYNLL-N 330 (549)
Q Consensus 260 lG~G~fg~Vy~~~~----~~g~~~AvK~l~~~~~~~---~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~-~ 330 (549)
+|+|+||+|+++.. ..|..+|+|++++..... .....|..++...+ ||+++++.-.++.+...++++++. +
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 79999999998732 347899999987643221 24556888888887 999999999999999999999999 5
Q ss_pred CCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCc
Q 008898 331 GSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENV 407 (549)
Q Consensus 331 gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~ 407 (549)
|.|...+.. +.+.....+...++-|++.+|+. +|+|||+|++||+++.+ |++++.|||+++..-...
T Consensus 82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~-Ghi~~tdfglske~v~~~------ 151 (612)
T KOG0603|consen 82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLE-GHIKLTDFGLSKEAVKEK------ 151 (612)
T ss_pred chhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeeccc-CccccCCchhhhHhHhhh------
Confidence 688877754 44455556677888999999999 99999999999999999 899999999986543211
Q ss_pred cccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccC
Q 008898 408 KPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEY 487 (549)
Q Consensus 408 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 487 (549)
..|||..|||||++. .+..++|+||||++++||+||-.||.... ...+. . .....
T Consensus 152 ---~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~---------~~~Il---------~--~~~~~ 206 (612)
T KOG0603|consen 152 ---IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDT---------MKRIL---------K--AELEM 206 (612)
T ss_pred ---hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHH---------HHHHh---------h--hccCC
Confidence 118999999999988 67889999999999999999999998611 11111 1 11234
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCH--HHHHHHh
Q 008898 488 NREEIEIVMCAARLCLLHSSSRRPTM--KTLLKLF 520 (549)
Q Consensus 488 ~~~~~~~l~~li~~Cl~~dP~~RPs~--~evl~~L 520 (549)
+.........+++.++..+|.+|.-. ..+.+.+
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik 241 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIK 241 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHh
Confidence 56667778888899999999999866 3444443
No 414
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=3e-20 Score=175.85 Aligned_cols=191 Identities=14% Similarity=0.144 Sum_probs=141.7
Q ss_pred CCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHH-----HHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEEe
Q 008898 254 FSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEE-----EVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVYN 327 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~-----~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e 327 (549)
+.....|++|+||+||.+.. ++.+++.+.+..+.+... -+.+|+++|++|. |+++.+++++ +..+++|+
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred cccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 34567899999999998765 778888888876665433 4678999999995 5889999886 34689999
Q ss_pred ccCC-CHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecC-CCCCEEEecCCCceEEeeecccccccccccc--
Q 008898 328 LLNG-SLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDV-KSSNILLSENFHHPQLSDFGAAMVHHQSHQV-- 403 (549)
Q Consensus 328 ~~~g-sL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDl-kp~NILl~~~~~~~kL~DFGla~~~~~~~~~-- 403 (549)
|+.| +|.+.+.. ....++.|++.+|.++|+. ||+|||| ||+|||++.+ +.++|+|||+|.........
T Consensus 79 yI~G~~L~~~~~~----~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~-g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 79 YLAGAAMYQRPPR----GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQED-GSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred eecCccHHhhhhh----hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCC-CCEEEEECCCceecCCcchHHH
Confidence 9855 67654322 2245778999999999999 9999999 7999999988 68999999999754432210
Q ss_pred --c-cC---ccccccccCCccccccccccC-CCC-chhhHHHHHHHHHHHHcCCCCCCCccc
Q 008898 404 --S-EN---VKPVNVVGTFGYLAPEYMMYG-KVD-EKIDVYSYGVVLLELITGKEAIQTNKA 457 (549)
Q Consensus 404 --~-~~---~~~~~~~gt~~y~APE~~~~~-~~~-~k~DvwSlGvil~elltG~~p~~~~~~ 457 (549)
. .. ........++.|++|+...-- ..+ ...++++.|+.+|.++|++.+.-.+.+
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0 00 000112367888888764422 333 578999999999999999988765544
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=6.4e-21 Score=183.94 Aligned_cols=170 Identities=16% Similarity=0.200 Sum_probs=130.9
Q ss_pred hhhcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHH----------HHHHHHHHhcCCCCCeeeEEEEEEc
Q 008898 249 HLTHNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEE----------VLREVELLSSIKHENIVRIIGYCHS 318 (549)
Q Consensus 249 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~----------~~~E~~il~~l~h~nIv~l~~~~~~ 318 (549)
.+.++|+..++||.|+||.||+... +++.+|+|++.......+. +.+|+..+.++.|++|..+..++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3467899999999999999999765 5778999999754433222 5789999999999999999887653
Q ss_pred C--------CeEEEEEeccCC-CHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEe
Q 008898 319 K--------EMYAIVYNLLNG-SLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLS 389 (549)
Q Consensus 319 ~--------~~~~lv~e~~~g-sL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~ 389 (549)
. ...+++|||+.| +|.++.. .+. ....+++.+|..||.. |++|||+||+||+++++ + ++|+
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~-g-i~li 176 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKN-G-LRII 176 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCC-C-EEEE
Confidence 2 358899999966 7877632 221 3456999999999999 99999999999999988 6 9999
Q ss_pred eeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHH
Q 008898 390 DFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELI 446 (549)
Q Consensus 390 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ell 446 (549)
|||........ .. ...+++...|+.++|+|+||+.+..+.
T Consensus 177 Dfg~~~~~~e~-------~a----------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 177 DLSGKRCTAQR-------KA----------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ECCCcccccch-------hh----------HHHHHHHhHhcccccccceeEeehHHH
Confidence 99987432111 00 011355566778999999999887654
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.83 E-value=1.5e-19 Score=179.45 Aligned_cols=225 Identities=18% Similarity=0.235 Sum_probs=143.8
Q ss_pred CCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCC-----------CCeeeEEE---
Q 008898 254 FSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKH-----------ENIVRIIG--- 314 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h-----------~nIv~l~~--- 314 (549)
+.....||.|+|+.||.+.+ .+|+.+|+|++...... .+++.+|.-....+.+ ..++++--
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 34566899999999999988 56999999998644322 2445555544444322 12222110
Q ss_pred -----EEEcC---C-----eEEEEEeccCCCHHHHHHH----------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEec
Q 008898 315 -----YCHSK---E-----MYAIVYNLLNGSLKQYLKQ----------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRD 371 (549)
Q Consensus 315 -----~~~~~---~-----~~~lv~e~~~gsL~~~l~~----------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrD 371 (549)
++... + .++++|+-+.++|.+++.- .....++.+..|+++.+++||+. |++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgd 170 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGD 170 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecc
Confidence 12211 1 3467888888999888743 22334456678999999999999 999999
Q ss_pred CCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccC--------CCCchhhHHHHHHHHH
Q 008898 372 VKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYG--------KVDEKIDVYSYGVVLL 443 (549)
Q Consensus 372 lkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~--------~~~~k~DvwSlGvil~ 443 (549)
|+|+|++++.+ |.+.|+||+......... .....+..|.+||..... .++.+.|.|+||+++|
T Consensus 171 i~~~nfll~~~-G~v~Lg~F~~~~r~g~~~--------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly 241 (288)
T PF14531_consen 171 IKPENFLLDQD-GGVFLGDFSSLVRAGTRY--------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY 241 (288)
T ss_dssp -SGGGEEE-TT-S-EEE--GGGEEETTEEE--------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred cceeeEEEcCC-CCEEEcChHHHeecCcee--------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence 99999999999 799999998764433211 112335679999976432 4788999999999999
Q ss_pred HHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCC
Q 008898 444 ELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRR 510 (549)
Q Consensus 444 elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R 510 (549)
.|.||+.||.......... ..+ .... +.++.+..+|..+|++||.+|
T Consensus 242 ~lWC~~lPf~~~~~~~~~~------------------~~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 242 SLWCGRLPFGLSSPEADPE------------------WDF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHSS-STCCCGGGSTSG------------------GGG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHccCCCCCCCcccccc------------------ccc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999999998664422100 011 2223 778899999999999999988
No 417
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.82 E-value=6.8e-21 Score=181.11 Aligned_cols=234 Identities=18% Similarity=0.342 Sum_probs=178.0
Q ss_pred eEcccCceEEEEEEecCCcEEEEEEeecCCcC---HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHH
Q 008898 259 LIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS---EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLK 334 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~ 334 (549)
+|.+...|..|+|++. |..+++|+++..... ..+|..|.-.|+-+.||||++++|.|.....+.++..|| .|+|+
T Consensus 197 kl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly 275 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY 275 (448)
T ss_pred hhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence 4778888999999985 445667888655433 357889999999999999999999999999999999999 79999
Q ss_pred HHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEE-EecCCCCCEEEecCCCceEEe--eeccccccccccccccC
Q 008898 335 QYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPII-HRDVKSSNILLSENFHHPQLS--DFGAAMVHHQSHQVSEN 406 (549)
Q Consensus 335 ~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~ii-HrDlkp~NILl~~~~~~~kL~--DFGla~~~~~~~~~~~~ 406 (549)
..+.. .+..+..+++.+|+.|+.|||+.. ++| ---|.+..+++|++. ..+|. |--++ ...
T Consensus 276 nvlhe~t~vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedl-tarismad~kfs--------fqe- 343 (448)
T KOG0195|consen 276 NVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDL-TARISMADTKFS--------FQE- 343 (448)
T ss_pred HHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchh-hhheecccceee--------eec-
Confidence 99964 456788899999999999999983 444 446889999999984 56653 43222 111
Q ss_pred ccccccccCCccccccccccCCCC---chhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcc
Q 008898 407 VKPVNVVGTFGYLAPEYMMYGKVD---EKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQL 483 (549)
Q Consensus 407 ~~~~~~~gt~~y~APE~~~~~~~~---~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 483 (549)
....-.|.||+||.+...+-+ .++|+|||++++|||.|..-||....+..-.. ++.-+.+
T Consensus 344 ---~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm--------------kialegl 406 (448)
T KOG0195|consen 344 ---VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM--------------KIALEGL 406 (448)
T ss_pred ---cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh--------------hhhhccc
Confidence 122346789999999866543 57999999999999999999998776532111 1111223
Q ss_pred cccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 008898 484 NEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 484 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~ 522 (549)
...+++.....+..++.-|+..||.+||.+..|+-+|++
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence 334445555678888899999999999999999888764
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=9.4e-20 Score=172.93 Aligned_cols=133 Identities=17% Similarity=0.217 Sum_probs=101.5
Q ss_pred CceEcccCceEEEEEEecCCcEEEEEEeecCCcCH---------------------------HHHHHHHHHHhcCCCCCe
Q 008898 257 KMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSE---------------------------EEVLREVELLSSIKHENI 309 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~---------------------------~~~~~E~~il~~l~h~nI 309 (549)
...||+|+||.||+|...+|+.||||+++...... .....|+.++..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999999988789999999997642210 112349999999987776
Q ss_pred eeEEEEEEcCCeEEEEEeccCCC-HHHH-HH--HhchhHHHHHHHHHHHHHHHH-HhCCCCCEEEecCCCCCEEEecCCC
Q 008898 310 VRIIGYCHSKEMYAIVYNLLNGS-LKQY-LK--QLKWNERMDVAIGVAKALEYL-HHTCDPPIIHRDVKSSNILLSENFH 384 (549)
Q Consensus 310 v~l~~~~~~~~~~~lv~e~~~gs-L~~~-l~--~~~~~~~~~i~~~i~~aL~yL-H~~~~~~iiHrDlkp~NILl~~~~~ 384 (549)
.....+... ..++||||++|+ +... +. .++......++.|++.+|.|| |+. +|+||||||+|||+++ +
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~~--~ 154 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYHD--G 154 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEEC--C
Confidence 433332222 237999999654 4333 22 366777889999999999999 688 9999999999999985 4
Q ss_pred ceEEeeeccccc
Q 008898 385 HPQLSDFGAAMV 396 (549)
Q Consensus 385 ~~kL~DFGla~~ 396 (549)
.++|+|||+|..
T Consensus 155 ~v~LiDFG~a~~ 166 (190)
T cd05147 155 KLYIIDVSQSVE 166 (190)
T ss_pred cEEEEEcccccc
Confidence 799999999854
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=6.1e-19 Score=167.52 Aligned_cols=134 Identities=22% Similarity=0.253 Sum_probs=103.8
Q ss_pred CceEcccCceEEEEEEecCCcEEEEEEeecCCcC---------------------------HHHHHHHHHHHhcCCCCCe
Q 008898 257 KMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS---------------------------EEEVLREVELLSSIKHENI 309 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~---------------------------~~~~~~E~~il~~l~h~nI 309 (549)
...||+|+||.||+|.+.+|+.||||+++..... ...+.+|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4579999999999998778999999999765211 0113578899999999987
Q ss_pred eeEEEEEEcCCeEEEEEeccCCC-H-HHHHHH--hchhHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCC
Q 008898 310 VRIIGYCHSKEMYAIVYNLLNGS-L-KQYLKQ--LKWNERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFH 384 (549)
Q Consensus 310 v~l~~~~~~~~~~~lv~e~~~gs-L-~~~l~~--~~~~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~ 384 (549)
.....+.... .++||||++|. + ...+.. ++..+...++.|++.++.+||+ . ||+||||||+|||++ + +
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~-~ 154 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-D-G 154 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-C-C
Confidence 5443333322 37999999664 3 333433 4556778899999999999999 8 999999999999999 5 5
Q ss_pred ceEEeeecccccc
Q 008898 385 HPQLSDFGAAMVH 397 (549)
Q Consensus 385 ~~kL~DFGla~~~ 397 (549)
.++|+|||+|...
T Consensus 155 ~~~liDFG~a~~~ 167 (190)
T cd05145 155 KPYIIDVSQAVEL 167 (190)
T ss_pred CEEEEEcccceec
Confidence 8999999998543
No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=6.5e-19 Score=169.14 Aligned_cols=136 Identities=21% Similarity=0.330 Sum_probs=104.2
Q ss_pred CCCCceEcccCceEEEEEEecCCcEEEEEEeecCC-cCHHHHHHHHHHHhcC-----CCCCeeeEEEEEEcCC---e-EE
Q 008898 254 FSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTN-WSEEEVLREVELLSSI-----KHENIVRIIGYCHSKE---M-YA 323 (549)
Q Consensus 254 f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~-~~~~~~~~E~~il~~l-----~h~nIv~l~~~~~~~~---~-~~ 323 (549)
.....+||+|+||.||. ...++.. +||++.... ...+.+.+|+.+++.+ .||||++++|+++++. . +.
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34567899999999996 2234444 699887543 2346789999999999 5799999999998874 3 44
Q ss_pred EEEeccC---CCHHHHHHHhchhHHHHHHHHHHHHH-HHHHhCCCCCEEEecCCCCCEEEecC---CCceEEeeeccc
Q 008898 324 IVYNLLN---GSLKQYLKQLKWNERMDVAIGVAKAL-EYLHHTCDPPIIHRDVKSSNILLSEN---FHHPQLSDFGAA 394 (549)
Q Consensus 324 lv~e~~~---gsL~~~l~~~~~~~~~~i~~~i~~aL-~yLH~~~~~~iiHrDlkp~NILl~~~---~~~~kL~DFGla 394 (549)
+++||.+ |+|.+++++....+...++.+++.++ +|||++ +|+||||||+|||++.. ...++|+||+.+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 7899954 79999997643333345677888777 999999 99999999999999742 237999995433
No 421
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=1.7e-18 Score=182.38 Aligned_cols=213 Identities=20% Similarity=0.323 Sum_probs=156.8
Q ss_pred HhcCCCCCeeeEEEEEEcCCeEEEEEecc-CCCHHHHHHH----hchhHHHHHHHHHHHHHHHHHhCCCCCE-EEecCCC
Q 008898 301 LSSIKHENIVRIIGYCHSKEMYAIVYNLL-NGSLKQYLKQ----LKWNERMDVAIGVAKALEYLHHTCDPPI-IHRDVKS 374 (549)
Q Consensus 301 l~~l~h~nIv~l~~~~~~~~~~~lv~e~~-~gsL~~~l~~----~~~~~~~~i~~~i~~aL~yLH~~~~~~i-iHrDlkp 374 (549)
|+.+.|.|+.+++|.+.++...+++.+|| .|+|.+.+.. +++.....+..+|+.||.|||+. +| .|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence 46789999999999999999999999999 8999999954 66777788899999999999988 55 9999999
Q ss_pred CCEEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCC-------CCchhhHHHHHHHHHHHHc
Q 008898 375 SNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGK-------VDEKIDVYSYGVVLLELIT 447 (549)
Q Consensus 375 ~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-------~~~k~DvwSlGvil~ellt 447 (549)
.|++++..+ .+||+|||+....... ..........-..-|.|||.+.+.. .+.+.||||||++++|+++
T Consensus 78 ~nClvd~~w-~lklt~~Gl~~~~~~~---~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 78 SNCLVDSRW-VLKLTDFGLNSLLEET---AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred ccceeeeeE-EEEechhhhccccccc---ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 999999996 8999999997654320 0001111112345699999987642 4667999999999999999
Q ss_pred CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCch
Q 008898 448 GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDY 525 (549)
Q Consensus 448 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 525 (549)
...||......... ...+..+.. ......-|.+... .+..+.+..++..||..+|..||++..+-..++..+.
T Consensus 154 r~~~~~~~~~~~~~-~eii~~~~~--~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDP-DEIILRVKK--GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccCccccccccCCh-HHHHHHHHh--cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 99999875442221 111112221 1111122222211 1444568889999999999999999999887776553
No 422
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.7e-18 Score=171.24 Aligned_cols=196 Identities=22% Similarity=0.256 Sum_probs=135.8
Q ss_pred CCCCeeeEEEEEEc---------------------------CCeEEEEEeccCCCHHHHHHH--hchhHHHHHHHHHHHH
Q 008898 305 KHENIVRIIGYCHS---------------------------KEMYAIVYNLLNGSLKQYLKQ--LKWNERMDVAIGVAKA 355 (549)
Q Consensus 305 ~h~nIv~l~~~~~~---------------------------~~~~~lv~e~~~gsL~~~l~~--~~~~~~~~i~~~i~~a 355 (549)
.|||||+++++|.+ +..+|+||.-...+|.+|+-. .+.....-++.|+++|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~~s~r~~~~~laQlLEa 353 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRHRSYRTGRVILAQLLEA 353 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 59999999876632 247899998888999999954 4555666788999999
Q ss_pred HHHHHhCCCCCEEEecCCCCCEEEe--cC-CCceEEeeeccccccccc-cccccCccccccccCCccccccccccCC---
Q 008898 356 LEYLHHTCDPPIIHRDVKSSNILLS--EN-FHHPQLSDFGAAMVHHQS-HQVSENVKPVNVVGTFGYLAPEYMMYGK--- 428 (549)
Q Consensus 356 L~yLH~~~~~~iiHrDlkp~NILl~--~~-~~~~kL~DFGla~~~~~~-~~~~~~~~~~~~~gt~~y~APE~~~~~~--- 428 (549)
+.|||++ ||.|||+|++|||+. +| ...+.|+|||++---... -...-.......-|....||||++...+
T Consensus 354 v~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~ 430 (598)
T KOG4158|consen 354 VTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPN 430 (598)
T ss_pred HHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCc
Confidence 9999999 999999999999984 33 124578999987322211 0111112223445788899999986432
Q ss_pred --C-CchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhccc
Q 008898 429 --V-DEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLH 505 (549)
Q Consensus 429 --~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~ 505 (549)
. -.|+|.|+.|.+.||++....||....+..-.. ...++---|.+ +..++..+.+++...|++
T Consensus 431 avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~----------r~Yqe~qLPal----p~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 431 AVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT----------RTYQESQLPAL----PSRVPPVARQLVFDLLKR 496 (598)
T ss_pred eeeccchhhhhhhhhhHHHHhccCCcccccchheech----------hhhhhhhCCCC----cccCChHHHHHHHHHhcC
Confidence 1 258999999999999999999998743311111 11111111223 333445567777889999
Q ss_pred CCCCCCCHHHHH
Q 008898 506 SSSRRPTMKTLL 517 (549)
Q Consensus 506 dP~~RPs~~evl 517 (549)
||.+|++..=..
T Consensus 497 ~pskRvsp~iAA 508 (598)
T KOG4158|consen 497 DPSKRVSPNIAA 508 (598)
T ss_pred CccccCCccHHH
Confidence 999999976443
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=2.7e-18 Score=192.55 Aligned_cols=194 Identities=23% Similarity=0.228 Sum_probs=152.2
Q ss_pred hhcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC---CCCeeeEEEEEEcCCeEEEEE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIK---HENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lv~ 326 (549)
-.+.|.+.+.||+|+||+||+|...+|+.+|+|+-+.....+-.+ =.+++.+|+ -+.|..+...+.-.+.-++++
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI--~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ 773 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYI--CLQVMERLKPQMLPSIMHISSAHVFQNASVLVS 773 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeee--hHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence 346788889999999999999998889999999987665332222 223334444 233444444445557778889
Q ss_pred ecc-CCCHHHHHHH---hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEec------CCCceEEeeeccccc
Q 008898 327 NLL-NGSLKQYLKQ---LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSE------NFHHPQLSDFGAAMV 396 (549)
Q Consensus 327 e~~-~gsL~~~l~~---~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~------~~~~~kL~DFGla~~ 396 (549)
+|. .|+|.+++.. +++.-.+.+..||+..++.||.. +|||+||||+|+||.. +..-++|+|||.+..
T Consensus 774 ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 774 EYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred eccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 998 7999999953 67777888999999999999999 9999999999999942 223589999999865
Q ss_pred cccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEA 451 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p 451 (549)
+.- ..++.+....++|-.+-.+|+..|..++..+|.|.|+-+++-||.|+..
T Consensus 851 m~l---fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 851 MKL---FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eeE---cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 433 3444566678899999999999999999999999999999999999643
No 424
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.75 E-value=6.5e-19 Score=193.96 Aligned_cols=220 Identities=24% Similarity=0.324 Sum_probs=148.9
Q ss_pred hhcCCCCCceEcccCceEEEEEEec-CCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNHV-DGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
..++|..+++|..|+||.||.++|+ +.+.+|+|+ ++.+ .+.+- |+.....|+++ ++.
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~----lilRn--ilt~a~npfvv--------gDc------- 138 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQN----LILRN--ILTFAGNPFVV--------GDC------- 138 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccc----hhhhc--cccccCCccee--------chh-------
Confidence 3568999999999999999999885 467888854 3222 11111 44444555555 000
Q ss_pred cCCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccc-------
Q 008898 329 LNGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSH------- 401 (549)
Q Consensus 329 ~~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~------- 401 (549)
.+|...+..++ .+++.+++|||+. +|+|||+||+|.+|+.- |++|++|||+.+......
T Consensus 139 --~tllk~~g~lP--------vdmvla~Eylh~y---givhrdlkpdnllIT~m-GhiKlTDfgLsk~GLms~atnl~eg 204 (1205)
T KOG0606|consen 139 --ATLLKNIGPLP--------VDMVLAVEYLHSY---GIVHRDLKPDNLLITSM-GHIKLTDFGLSKKGLMSLATNLKEG 204 (1205)
T ss_pred --hhhcccCCCCc--------chhhHHhHhhccC---CeecCCCCCCcceeeec-ccccccchhhhhhhhhhccchhhhc
Confidence 11221111121 1237899999999 99999999999999998 899999999985422210
Q ss_pred ---ccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccc
Q 008898 402 ---QVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERL 478 (549)
Q Consensus 402 ---~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 478 (549)
..........++|||.|.|||++.-.+|...+|||++|+|+||++-|..||..+.++. .+-.++.. ... +
T Consensus 205 ~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee-lfg~visd---~i~---w 277 (1205)
T KOG0606|consen 205 HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQVISD---DIE---W 277 (1205)
T ss_pred chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH-HHhhhhhh---hcc---c
Confidence 1122223346799999999999999999999999999999999999999998876542 22111111 111 1
Q ss_pred cCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 479 IDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 479 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
+. . +........+++...|+.+|..|--...-++
T Consensus 278 --pE---~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~e 311 (1205)
T KOG0606|consen 278 --PE---E-DEALPPEAQDLIEQLLRQNPLCRLGTGGALE 311 (1205)
T ss_pred --cc---c-CcCCCHHHHHHHHHHHHhChHhhcccchhhh
Confidence 11 1 2223345677889999999999975554443
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=7.4e-17 Score=155.34 Aligned_cols=132 Identities=25% Similarity=0.372 Sum_probs=110.2
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcC---------HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEec
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS---------EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNL 328 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~---------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 328 (549)
+.||+|++|.||+|.+ +|..+++|+....... ...+.+|+.++..+.|+++.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4699999999999987 6778999987543211 13467899999999999988777777677788899999
Q ss_pred c-CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 329 L-NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 329 ~-~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
+ +++|.+++..... ....++.+++.+|.+||+. +++|+|++|.|||++ + +.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~-~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNGM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-G-GKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-C-CCEEEEECCcccC
Confidence 9 5689999876555 7788999999999999999 999999999999999 4 5799999998743
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=1.6e-16 Score=151.78 Aligned_cols=135 Identities=21% Similarity=0.218 Sum_probs=104.9
Q ss_pred hcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC-----------------------HHHHHHHHHHHhcCCCC
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS-----------------------EEEVLREVELLSSIKHE 307 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~-----------------------~~~~~~E~~il~~l~h~ 307 (549)
..-|...+.||+|+||.||++...+|+.+|||++...... ......|..++..+.|+
T Consensus 14 ~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 93 (198)
T cd05144 14 GVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE 93 (198)
T ss_pred CchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence 3347778899999999999998888999999997653311 11256788899988877
Q ss_pred --CeeeEEEEEEcCCeEEEEEeccC-CCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCC
Q 008898 308 --NIVRIIGYCHSKEMYAIVYNLLN-GSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFH 384 (549)
Q Consensus 308 --nIv~l~~~~~~~~~~~lv~e~~~-gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 384 (549)
.+...++. ...+++|||+. ++|.+.... .....++.+++.++.++|+. +|+|+||||+||+++++ +
T Consensus 94 ~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~-~ 162 (198)
T cd05144 94 GFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDD-E 162 (198)
T ss_pred CCCCCceeec----CCceEEEEEeCCcchhhcccc---ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCC-C
Confidence 44444442 34588999995 466654321 34567889999999999998 99999999999999987 6
Q ss_pred ceEEeeeccccc
Q 008898 385 HPQLSDFGAAMV 396 (549)
Q Consensus 385 ~~kL~DFGla~~ 396 (549)
.++|+|||++..
T Consensus 163 ~~~liDfg~~~~ 174 (198)
T cd05144 163 KIYIIDWPQMVS 174 (198)
T ss_pred cEEEEECCcccc
Confidence 899999999843
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.2e-16 Score=156.76 Aligned_cols=135 Identities=17% Similarity=0.226 Sum_probs=103.1
Q ss_pred CCCCCceEcccCceEEEEEE--ecCCcEEEEEEeecCCcC-------------------------HHHHHHHHHHHhcCC
Q 008898 253 NFSPKMLIGQGGNSKVYRTN--HVDGQVAAVKVLKCTNWS-------------------------EEEVLREVELLSSIK 305 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~--~~~g~~~AvK~l~~~~~~-------------------------~~~~~~E~~il~~l~ 305 (549)
-|.+.+.||+|+||.||+|. ..+|+.||+|+++..... ...+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 37788899999999999998 468999999999754210 012457999999997
Q ss_pred CC--CeeeEEEEEEcCCeEEEEEeccCC-CHHHHH-HH--hchhHHHHHHHHHHHHHHHHHhCCCCC-EEEecCCCCCEE
Q 008898 306 HE--NIVRIIGYCHSKEMYAIVYNLLNG-SLKQYL-KQ--LKWNERMDVAIGVAKALEYLHHTCDPP-IIHRDVKSSNIL 378 (549)
Q Consensus 306 h~--nIv~l~~~~~~~~~~~lv~e~~~g-sL~~~l-~~--~~~~~~~~i~~~i~~aL~yLH~~~~~~-iiHrDlkp~NIL 378 (549)
+. .+.+++++ ...++||||++| +|.... .. ....+...++.||+.+|.+||+. + |+||||||+||+
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIl 181 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNIL 181 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEE
Confidence 53 34444543 234799999966 555443 22 33344568999999999999999 9 999999999999
Q ss_pred EecCCCceEEeeeccccc
Q 008898 379 LSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 379 l~~~~~~~kL~DFGla~~ 396 (549)
++ + +.++|+|||.|..
T Consensus 182 i~-~-~~i~LiDFg~a~~ 197 (237)
T smart00090 182 VH-D-GKVVIIDVSQSVE 197 (237)
T ss_pred EE-C-CCEEEEEChhhhc
Confidence 99 5 5899999999843
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=4.3e-16 Score=148.68 Aligned_cols=128 Identities=23% Similarity=0.339 Sum_probs=101.5
Q ss_pred eEcccCceEEEEEEecCCcEEEEEEeecCCc--C-------HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 259 LIGQGGNSKVYRTNHVDGQVAAVKVLKCTNW--S-------EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~--~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
+||+|+||.||++.. +|..+++|....... . ...+.+|+++++.+.|+++.....++...+..+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 678899998653221 1 134668999999999887654444455566678999999
Q ss_pred -CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 330 -NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 330 -~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
+++|.+++..... .++.+++.+|.+||+. +++|+|++|.||+++ + +.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~~----~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~-~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND----ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-D-DKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH----HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-C-CcEEEEECCCCcC
Confidence 5688887754322 7899999999999999 999999999999999 4 5899999999854
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.68 E-value=1.1e-17 Score=173.32 Aligned_cols=171 Identities=26% Similarity=0.445 Sum_probs=121.6
Q ss_pred eEEEEEecc-CCCHHHHHHH------hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecc
Q 008898 321 MYAIVYNLL-NGSLKQYLKQ------LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGA 393 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l~~------~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGl 393 (549)
.++|.|++| .++|.++|.. .++...+.++.|++.|++| + +.+|+|+||.||++..+ ..+||+|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d-~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDD-DQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccc-hhhhhhhhhh
Confidence 588999999 6899999953 5667788899999999999 5 89999999999999988 5899999999
Q ss_pred ccccccccc-cccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCcccchhhHHHHHHHhhc
Q 008898 394 AMVHHQSHQ-VSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT-GKEAIQTNKANRESLVLWARSLLS 471 (549)
Q Consensus 394 a~~~~~~~~-~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~ 471 (549)
..-...... .......+...||..||+||.+.+..|+.++||||||+||+||+. =..+++.... + ...+
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t----~-----~d~r 473 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIAT----L-----TDIR 473 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHh----h-----hhhh
Confidence 855433220 111223446689999999999999999999999999999999986 2222221110 0 1111
Q ss_pred ccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 008898 472 SGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTL 516 (549)
Q Consensus 472 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev 516 (549)
+ ..++|.....++. =..++.+++...|.+||++.+.
T Consensus 474 ~----g~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 474 D----GIIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred c----CCCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHH
Confidence 1 1122222222211 2345688999999999955443
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=3.5e-16 Score=171.79 Aligned_cols=134 Identities=23% Similarity=0.330 Sum_probs=106.4
Q ss_pred cCCCCCceEcccCceEEEEEEecCCcEEEEEEe-ecC-Cc-------CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeE
Q 008898 252 HNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVL-KCT-NW-------SEEEVLREVELLSSIKHENIVRIIGYCHSKEMY 322 (549)
Q Consensus 252 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l-~~~-~~-------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 322 (549)
..|...++||+|+||.||++.+.+.. +++|+. ... .. ..+.+.+|+++++.++|++++....++...+..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 44567889999999999999875443 344432 211 11 123577899999999999998887777777778
Q ss_pred EEEEecc-CCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 323 AIVYNLL-NGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 323 ~lv~e~~-~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
+++|||+ +++|.+++. ....++.+++++|.|||+. +++||||||+|||++ + +.++|+|||++..
T Consensus 412 ~lv~E~~~g~~L~~~l~-----~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl~-~-~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-----GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIVR-D-DRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH-----HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEEE-C-CcEEEEeCccccc
Confidence 8999999 668988875 3567899999999999999 999999999999995 4 4799999999854
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=1.4e-15 Score=143.57 Aligned_cols=131 Identities=20% Similarity=0.293 Sum_probs=94.2
Q ss_pred CceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHH-------------------------HHHHHHHHhcCCCCC--e
Q 008898 257 KMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEE-------------------------VLREVELLSSIKHEN--I 309 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~-------------------------~~~E~~il~~l~h~n--I 309 (549)
.+.||+|+||.||++...+|+.||||+++........ ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4579999999999998878999999998754322111 124555565554332 4
Q ss_pred eeEEEEEEcCCeEEEEEeccCC-CH-HHHHHHhch-hHHHHHHHHHHHHHHHHHh-CCCCCEEEecCCCCCEEEecCCCc
Q 008898 310 VRIIGYCHSKEMYAIVYNLLNG-SL-KQYLKQLKW-NERMDVAIGVAKALEYLHH-TCDPPIIHRDVKSSNILLSENFHH 385 (549)
Q Consensus 310 v~l~~~~~~~~~~~lv~e~~~g-sL-~~~l~~~~~-~~~~~i~~~i~~aL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~ 385 (549)
.+.+++ ...+++|||+.| ++ ...+..... .+...++.+++.++.++|. . +|+|+||||+||+++ + +.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~-~~ 152 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-D-GK 152 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-C-Cc
Confidence 444443 235899999965 21 112222222 6677899999999999999 7 999999999999999 5 58
Q ss_pred eEEeeeccccc
Q 008898 386 PQLSDFGAAMV 396 (549)
Q Consensus 386 ~kL~DFGla~~ 396 (549)
++|+|||.+..
T Consensus 153 ~~liDfg~a~~ 163 (187)
T cd05119 153 VYIIDVPQAVE 163 (187)
T ss_pred EEEEECccccc
Confidence 99999999843
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.60 E-value=6.7e-15 Score=132.38 Aligned_cols=134 Identities=20% Similarity=0.247 Sum_probs=110.7
Q ss_pred CCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCC--CCeeeEEEEEEcCCeEEEEEeccCC-C
Q 008898 256 PKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKH--ENIVRIIGYCHSKEMYAIVYNLLNG-S 332 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~~~~lv~e~~~g-s 332 (549)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.+.| .++++++++....+..++++||+.| .
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 35679999999999998744 7899999875543 4678899999999976 5899999998888889999999965 4
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 333 LKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 333 L~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
+..+ +......++.+++++|.+||.....+++|+|++|+||+++++ +.+++.|||.+..
T Consensus 80 ~~~~----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~-~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG-KILGIIDWEYAGY 138 (155)
T ss_pred cccC----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC-cEEEEEecccccC
Confidence 5433 445566788999999999998755579999999999999986 6899999998843
No 433
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.55 E-value=2.4e-16 Score=173.36 Aligned_cols=255 Identities=22% Similarity=0.279 Sum_probs=188.7
Q ss_pred CCCCCceEcccCceEEEEEEec--CCcEEEEEEeecCCcC---HHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEE
Q 008898 253 NFSPKMLIGQGGNSKVYRTNHV--DGQVAAVKVLKCTNWS---EEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 253 ~f~~~~~lG~G~fg~Vy~~~~~--~g~~~AvK~l~~~~~~---~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~ 326 (549)
.|...+-||+|+|+.|-..... ....+|+|.+...... ...+..|..+-..+. |+|++.+++.....+.+++..
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4666667999999999887552 3456677766544322 234456888888887 999999999999999999999
Q ss_pred ecc-CCCHHHHH-H----HhchhHHHHHHHHHHHHHHHHH-hCCCCCEEEecCCCCCEEEecCCC-ceEEeeeccccccc
Q 008898 327 NLL-NGSLKQYL-K----QLKWNERMDVAIGVAKALEYLH-HTCDPPIIHRDVKSSNILLSENFH-HPQLSDFGAAMVHH 398 (549)
Q Consensus 327 e~~-~gsL~~~l-~----~~~~~~~~~i~~~i~~aL~yLH-~~~~~~iiHrDlkp~NILl~~~~~-~~kL~DFGla~~~~ 398 (549)
++. +|++.+.+ . .......-.++.|+..++.|+| .. ++.||||||+|.+++.. + .++++|||+|....
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s-~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDES-GSALKIADFGLATAYR 176 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccC-CCcccCCCchhhcccc
Confidence 998 56777766 2 2445566778999999999999 77 99999999999999998 6 79999999997665
Q ss_pred cccccccCcccccccc-CCccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccc
Q 008898 399 QSHQVSENVKPVNVVG-TFGYLAPEYMMYGK-VDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCE 476 (549)
Q Consensus 399 ~~~~~~~~~~~~~~~g-t~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (549)
... .........+| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|++...........|.... +..
T Consensus 177 ~~~--g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~- 250 (601)
T KOG0590|consen 177 NKN--GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK---GRF- 250 (601)
T ss_pred ccC--CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc---ccc-
Confidence 421 12233345678 99999999988754 46889999999999999999999987765443332222211 000
Q ss_pred cccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhh
Q 008898 477 RLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKM 529 (549)
Q Consensus 477 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~ 529 (549)
..... ........+++.+++..+|..|.+.+++-. ++|+..
T Consensus 251 ---~~~~~----~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~-----d~~~~~ 291 (601)
T KOG0590|consen 251 ---TQLPW----NSISDQAHDLLHKILKENPSNRLSIEELKL-----DNWLSS 291 (601)
T ss_pred ---ccCcc----ccCChhhhhcccccccCCchhccccccccc-----cccccc
Confidence 01111 122234556667888899999999999987 789887
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=4.2e-14 Score=139.08 Aligned_cols=133 Identities=17% Similarity=0.279 Sum_probs=100.8
Q ss_pred CceEc-ccCceEEEEEEecCCcEEEEEEeecCC--------------cCHHHHHHHHHHHhcCCCCCe--eeEEEEEEcC
Q 008898 257 KMLIG-QGGNSKVYRTNHVDGQVAAVKVLKCTN--------------WSEEEVLREVELLSSIKHENI--VRIIGYCHSK 319 (549)
Q Consensus 257 ~~~lG-~G~fg~Vy~~~~~~g~~~AvK~l~~~~--------------~~~~~~~~E~~il~~l~h~nI--v~l~~~~~~~ 319 (549)
...|| .||.|+||.+... +..++||.+.... .....+.+|+.++..|.|++| +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999998774 6778898875321 112457789999999998775 6677665332
Q ss_pred -Ce---EEEEEeccCC--CHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecc
Q 008898 320 -EM---YAIVYNLLNG--SLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGA 393 (549)
Q Consensus 320 -~~---~~lv~e~~~g--sL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGl 393 (549)
.. .++++|++.| +|.+++....... ..+.+|+.+|.+||+. ||+||||||.|||++.+ +.++|+|||.
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~--~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~-~~v~LIDfg~ 188 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAPLSE--EQWQAIGQLIARFHDA---GVYHADLNAHNILLDPD-GKFWLIDFDR 188 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCCCCH--HHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCC-CCEEEEECCC
Confidence 22 2489999954 7988886543222 3467899999999999 99999999999999987 5899999998
Q ss_pred ccc
Q 008898 394 AMV 396 (549)
Q Consensus 394 a~~ 396 (549)
+..
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 743
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=4.8e-13 Score=141.52 Aligned_cols=249 Identities=24% Similarity=0.245 Sum_probs=180.5
Q ss_pred hcCCCCCceEcc--cCceEEEEEEe---cCCcEEEEEEeecCCc---CHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCe
Q 008898 251 THNFSPKMLIGQ--GGNSKVYRTNH---VDGQVAAVKVLKCTNW---SEEEVLREVELLSSIK-HENIVRIIGYCHSKEM 321 (549)
Q Consensus 251 ~~~f~~~~~lG~--G~fg~Vy~~~~---~~g~~~AvK~l~~~~~---~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~ 321 (549)
...|.+...+|. |.+|.||.+.. .++..+|+|.-+.... ....-.+|+.....++ |+|.++.+..+++.+.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 345777888999 99999999854 4688999997432221 1223456777666664 9999999999999999
Q ss_pred EEEEEeccCCCHHHHHHH----hchhHHHHHHHHHHH----HHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecc
Q 008898 322 YAIVYNLLNGSLKQYLKQ----LKWNERMDVAIGVAK----ALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGA 393 (549)
Q Consensus 322 ~~lv~e~~~gsL~~~l~~----~~~~~~~~i~~~i~~----aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGl 393 (549)
+++..|+++.+|..+... ++....+....+... ||..+|+. +++|-|+||.||+...+....+++|||+
T Consensus 193 lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 193 LFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred ceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcce
Confidence 999999999999888743 555667778888888 99999999 9999999999999998855789999999
Q ss_pred ccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhccc
Q 008898 394 AMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSG 473 (549)
Q Consensus 394 a~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~ 473 (549)
....................|...|++||... +-++.+.|+|++|.++.+-.+|..+........ |..
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W~~------ 337 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS-----WSQ------ 337 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC-----ccc------
Confidence 87655543222222223336778899999654 678899999999999999999988776553321 110
Q ss_pred ccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 474 LCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 474 ~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
..... +...+...-...+...+..|++.+|..|++.+.+..
T Consensus 338 -~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 -LRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -ccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 00111 111111111223334778899999999999887665
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.34 E-value=9.9e-12 Score=132.71 Aligned_cols=138 Identities=20% Similarity=0.173 Sum_probs=93.2
Q ss_pred CceEcccCceEEEEEEecCCcEEEEEEeecCCcCH-----------------------------------------HHHH
Q 008898 257 KMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSE-----------------------------------------EEVL 295 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~-----------------------------------------~~~~ 295 (549)
.+.||.|++|.||+|...+|+.||||+.+...... -++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999986532100 0133
Q ss_pred HHHHHHhcC----CCCCeeeEEEEE-EcCCeEEEEEecc-CCCHHHHHHHh-chhHHHHHHHHHHH-HHHHHHhCCCCCE
Q 008898 296 REVELLSSI----KHENIVRIIGYC-HSKEMYAIVYNLL-NGSLKQYLKQL-KWNERMDVAIGVAK-ALEYLHHTCDPPI 367 (549)
Q Consensus 296 ~E~~il~~l----~h~nIv~l~~~~-~~~~~~~lv~e~~-~gsL~~~l~~~-~~~~~~~i~~~i~~-aL~yLH~~~~~~i 367 (549)
+|...+.++ +|.+-+.+-.++ ......+++|||+ +++|.++.... .......++..++. .+..+|.. |+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~---g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD---GF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC---Cc
Confidence 344444433 232223322222 2234568999999 45777765321 11134456666666 46788888 99
Q ss_pred EEecCCCCCEEEecCCCceEEeeeccccccc
Q 008898 368 IHRDVKSSNILLSENFHHPQLSDFGAAMVHH 398 (549)
Q Consensus 368 iHrDlkp~NILl~~~~~~~kL~DFGla~~~~ 398 (549)
+|+|++|.||+++.+ +.++|+|||++....
T Consensus 279 ~H~D~hPgNilv~~~-g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 279 FHADLHPGNIFVLKD-GKIIALDFGIVGRLS 308 (437)
T ss_pred eeCCCCcccEEECCC-CcEEEEeCCCeeECC
Confidence 999999999999888 689999999985543
No 437
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.28 E-value=9.5e-11 Score=125.44 Aligned_cols=166 Identities=21% Similarity=0.279 Sum_probs=126.7
Q ss_pred EecCCcEEEEEEeecCCcC-HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEeccCCCHHHHHHHhchhHHHHHHH
Q 008898 272 NHVDGQVAAVKVLKCTNWS-EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLLNGSLKQYLKQLKWNERMDVAI 350 (549)
Q Consensus 272 ~~~~g~~~AvK~l~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~gsL~~~l~~~~~~~~~~i~~ 350 (549)
...++.++.|...+.+... ...+.+-++.|+.++||||+++++.+++++.+|+|.|-+. .|..+++++.......-+.
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~-Pl~~~lk~l~~~~v~~Gl~ 111 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR-PLETVLKELGKEEVCLGLF 111 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc-cHHHHHHHhHHHHHHHHHH
Confidence 3457888899888766542 2346677889999999999999999999999999999875 4677787877777777899
Q ss_pred HHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCC
Q 008898 351 GVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVD 430 (549)
Q Consensus 351 ~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~ 430 (549)
||+.||.|||..| +++|++|.-+.|+++.. |+-||++|.++........ ......---.|..|+.+....
T Consensus 112 qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~-GeWkLggle~v~~~~~~~~-----~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 112 QILAALSFLNDDC--NLVHGNVCKDSVFVNES-GEWKLGGLELVSKASGFNA-----PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHhccC--CeeeccEeeeeEEEcCC-CcEEEeeeEEEeccccCCc-----ccccchhhhcccChhhcCccc--
Confidence 9999999999665 99999999999999999 7999999998743222111 001111122456666444222
Q ss_pred chhhHHHHHHHHHHHHcC
Q 008898 431 EKIDVYSYGVVLLELITG 448 (549)
Q Consensus 431 ~k~DvwSlGvil~elltG 448 (549)
...|.|-|||+++|++.|
T Consensus 182 ~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cchhhhhHHHHHHHHhCc
Confidence 457999999999999999
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.26 E-value=1.9e-11 Score=113.23 Aligned_cols=128 Identities=20% Similarity=0.123 Sum_probs=92.4
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCee-eEEEEEEcCCeEEEEEeccCC-CHHH
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIV-RIIGYCHSKEMYAIVYNLLNG-SLKQ 335 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv-~l~~~~~~~~~~~lv~e~~~g-sL~~ 335 (549)
+.|+.|.++.||++... ++.+++|+..........+..|+.+++.+.+.+++ +++.+.. ...+++||++.| ++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcccc
Confidence 46889999999999864 77899998765432234567899999988655544 4555443 234789999965 4443
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHhCC--CCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 336 YLKQLKWNERMDVAIGVAKALEYLHHTC--DPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 336 ~l~~~~~~~~~~i~~~i~~aL~yLH~~~--~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
. .......+.+++++|..||+.. ..+++|+|++|.||+++. +.++++|||.+.
T Consensus 81 ~-----~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~--~~~~liDf~~a~ 135 (170)
T cd05151 81 E-----DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD--GRLWLIDWEYAG 135 (170)
T ss_pred c-----cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC--CeEEEEeccccc
Confidence 2 1112345678999999999982 123599999999999994 479999999873
No 439
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=1.1e-11 Score=121.87 Aligned_cols=197 Identities=24% Similarity=0.344 Sum_probs=127.3
Q ss_pred HhcCCCCCeeeEEEEEEcC-----CeEEEEEecc-CCCHHHHHHH-------hchhHHHHHHHHHHHHHHHHHhCCCCCE
Q 008898 301 LSSIKHENIVRIIGYCHSK-----EMYAIVYNLL-NGSLKQYLKQ-------LKWNERMDVAIGVAKALEYLHHTCDPPI 367 (549)
Q Consensus 301 l~~l~h~nIv~l~~~~~~~-----~~~~lv~e~~-~gsL~~~l~~-------~~~~~~~~i~~~i~~aL~yLH~~~~~~i 367 (549)
|-++.|.||+++..|+.+. ....++.||+ .|+|..+|++ +......+++.||..||.|||+. +..|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 4455799999998888543 3566777888 8999999976 33334457899999999999987 6799
Q ss_pred EEecCCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHc
Q 008898 368 IHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELIT 447 (549)
Q Consensus 368 iHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt 447 (549)
||+++..+-|++..+ |-+|++---.. ....+.............|-++|.|||.=.....+.++|||+||+..+||..
T Consensus 200 ihgnlTc~tifiq~n-gLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHN-GLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccCCcchhheeecCC-ceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 999999999999988 66665421111 1111111111111112346788999998666677889999999999999988
Q ss_pred CCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 448 GKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 448 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
|.---.......+.-+..+..++ .+-++ .-..+++.|+...|..||+|++++-
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~------~len~------------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVII------GLENG------------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred heeccCCCcceeehhhhhhhhee------eccCc------------cccCcCcccccCCCCCCcchhhhhc
Confidence 75332211111000000011110 11111 1123557899999999999999876
No 440
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=99.20 E-value=2.6e-10 Score=103.17 Aligned_cols=120 Identities=23% Similarity=0.272 Sum_probs=97.9
Q ss_pred EEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCccc--------c------------chHHHHHHhhhccCce
Q 008898 24 TVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDTLD--------L------------NTFHIHEDLCKSKKVD 83 (549)
Q Consensus 24 ~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~~--------~------------~~~~~~~~~c~~k~~~ 83 (549)
+|||++|.+..|+.+|.||+......|+.|++|||.++..... . +.+..+...|...+++
T Consensus 1 ~ILVavD~S~~s~~al~~a~~~a~~~~~~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 80 (146)
T cd01989 1 SVAVAVDKDKKSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSGKLEVASAYKQEEDKEAKELLLPYRCFCSRKGVQ 80 (146)
T ss_pred CEEEEecCccccHHHHHHHHHhccCCCCcEEEEEeccCcccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 4899999999999999999998888999999999985532110 0 1125556678888899
Q ss_pred EEEEEEecCcchhhHHHHHhhhcccEEEEecccCC----CC-chhHHHHHhhhCCCCcEEEEecc
Q 008898 84 FLVKVCIGDSYITELSNQVRISYATILALGCSLSG----LK-DSEVLTRCLRALPPACTILVMDN 143 (549)
Q Consensus 84 ~~~~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~~----~~-~~~v~~~c~~~~~~~c~v~~v~~ 143 (549)
++..+..|.+...+|+++|+...|+.||+|++.+. .- .+.|+.++.+++++.|.|+.|.+
T Consensus 81 ~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~~l~~~~~gssva~~Vi~~a~~~c~Vlvv~~ 145 (146)
T cd01989 81 CEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDNHFSMKFKKSDVASSVLKEAPDFCTVYVVSK 145 (146)
T ss_pred EEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCCceeecccCCchhHHHHhcCCCCceEEEEeC
Confidence 99999988777889999999999999999998661 11 12399999999999999999976
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.19 E-value=3.3e-11 Score=130.48 Aligned_cols=143 Identities=15% Similarity=0.155 Sum_probs=87.4
Q ss_pred hcCCCCCceEcccCceEEEEEEecC-CcEEEEEEeecCCc---------------------------CH--------H--
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNHVD-GQVAAVKVLKCTNW---------------------------SE--------E-- 292 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~~~-g~~~AvK~l~~~~~---------------------------~~--------~-- 292 (549)
..+|+. +.||.|++|.||+|.+.+ |+.||||+.++.-. .. +
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999876 99999999975410 00 1
Q ss_pred ----HHHHHHHHHhcC----CCCCeeeEEEEEE-cCCeEEEEEeccC-CCHHHH--HHHhchhHHHHHHHHHHH-HHHHH
Q 008898 293 ----EVLREVELLSSI----KHENIVRIIGYCH-SKEMYAIVYNLLN-GSLKQY--LKQLKWNERMDVAIGVAK-ALEYL 359 (549)
Q Consensus 293 ----~~~~E~~il~~l----~h~nIv~l~~~~~-~~~~~~lv~e~~~-gsL~~~--l~~~~~~~~~~i~~~i~~-aL~yL 359 (549)
++.+|..-+.++ .+.+.+.+-.++. -....++||||+. +.+.++ +..... ....++...++ -+..+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~-d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGT-DMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCC-CHHHHHHHHHHHHHHHH
Confidence 123344333333 2333333323222 2356789999995 577664 222111 11122222211 12233
Q ss_pred HhCCCCCEEEecCCCCCEEEecCCC----ceEEeeecccccccc
Q 008898 360 HHTCDPPIIHRDVKSSNILLSENFH----HPQLSDFGAAMVHHQ 399 (549)
Q Consensus 360 H~~~~~~iiHrDlkp~NILl~~~~~----~~kL~DFGla~~~~~ 399 (549)
+.. |++|+|+||.||+++.+ + .+++.|||++.....
T Consensus 277 f~~---GffHaDpHPGNIlv~~~-g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 FRD---GFFHADMHPGNIFVSYD-PPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HhC---CeeeCCCChHHeEEecC-CCCCCeEEEEecceEEECCH
Confidence 445 99999999999999987 5 799999999865443
No 442
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.12 E-value=3.9e-11 Score=127.20 Aligned_cols=243 Identities=21% Similarity=0.143 Sum_probs=168.6
Q ss_pred HHhhhcCCCCCceEcccCceEEEEEEe--cCCcEEEEEEeecCCcCH-HH--HHHHHHHHhcC-CCCCeeeEEEEEEcCC
Q 008898 247 LCHLTHNFSPKMLIGQGGNSKVYRTNH--VDGQVAAVKVLKCTNWSE-EE--VLREVELLSSI-KHENIVRIIGYCHSKE 320 (549)
Q Consensus 247 l~~~~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~~AvK~l~~~~~~~-~~--~~~E~~il~~l-~h~nIv~l~~~~~~~~ 320 (549)
......+|.....||.|.|+.|+.... .++..|++|.+...-... .+ -..|+-+...+ .|.+++.++..|...+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 444566799999999999999999854 467899999886543222 22 34566666665 4888898888777777
Q ss_pred eEEEEEecc-CCCHHHHH---HHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 321 MYAIVYNLL-NGSLKQYL---KQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 321 ~~~lv~e~~-~gsL~~~l---~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
..++-.||+ ++++.... ..+.....+.+..|++.++.++|++ .++|+|+||+||++..+.+..+++|||.+..
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccc
Confidence 778999999 55544333 3367778889999999999999999 9999999999999988645778999998742
Q ss_pred cccccccccCccccccccCCccc--cccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccc
Q 008898 397 HHQSHQVSENVKPVNVVGTFGYL--APEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTNKANRESLVLWARSLLSSGL 474 (549)
Q Consensus 397 ~~~~~~~~~~~~~~~~~gt~~y~--APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 474 (549)
..-. .....++-.++ +|+......+..+.|++|||.-+.|.++|...-..... |..
T Consensus 417 ~~~~--------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-------~~~------- 474 (524)
T KOG0601|consen 417 LAFS--------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-------SLT------- 474 (524)
T ss_pred ccee--------cccccccccccccchhhccccccccccccccccccccccccCcccCccccc-------cee-------
Confidence 1111 11222333444 44444456788999999999999999988655433221 110
Q ss_pred cccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 008898 475 CERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKL 519 (549)
Q Consensus 475 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 519 (549)
+..-.-+.. +.. ...+..+.+.++..++..||.+.++...
T Consensus 475 i~~~~~p~~----~~~-~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 475 IRSGDTPNL----PGL-KLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred eecccccCC----Cch-HHhhhhhhhhhcCCccccchhhhhhccc
Confidence 001111111 111 2455667788999999999999887663
No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.10 E-value=7e-10 Score=105.05 Aligned_cols=130 Identities=18% Similarity=0.211 Sum_probs=93.4
Q ss_pred ceEcccCceEEEEEEecC-------CcEEEEEEeecCCc----------------------CHH-H----HHHHHHHHhc
Q 008898 258 MLIGQGGNSKVYRTNHVD-------GQVAAVKVLKCTNW----------------------SEE-E----VLREVELLSS 303 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~-------g~~~AvK~l~~~~~----------------------~~~-~----~~~E~~il~~ 303 (549)
..||.|--+.||.|...+ +..+|||+.+.+.. +.. . ..+|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999996543 47999999853210 111 1 2379999998
Q ss_pred CCC--CCeeeEEEEEEcCCeEEEEEeccCCC-H-HHHHHH--hchhHHHHHHHHHHHHHHHH-HhCCCCCEEEecCCCCC
Q 008898 304 IKH--ENIVRIIGYCHSKEMYAIVYNLLNGS-L-KQYLKQ--LKWNERMDVAIGVAKALEYL-HHTCDPPIIHRDVKSSN 376 (549)
Q Consensus 304 l~h--~nIv~l~~~~~~~~~~~lv~e~~~gs-L-~~~l~~--~~~~~~~~i~~~i~~aL~yL-H~~~~~~iiHrDlkp~N 376 (549)
+.. -++...+++ ..-++||||++|+ + ...++. ++..+...+..+++.+|..| |.. +|||+||++.|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~~N 155 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSEYN 155 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence 853 456666654 4567899999763 2 112222 22334556788999999998 778 99999999999
Q ss_pred EEEecCCCceEEeeeccccc
Q 008898 377 ILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 377 ILl~~~~~~~kL~DFGla~~ 396 (549)
||++++ .+.|+|||.|..
T Consensus 156 IL~~~~--~v~iIDF~qav~ 173 (197)
T cd05146 156 MLWHDG--KVWFIDVSQSVE 173 (197)
T ss_pred EEEECC--cEEEEECCCcee
Confidence 999864 699999998843
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.09 E-value=1.4e-09 Score=100.12 Aligned_cols=128 Identities=29% Similarity=0.374 Sum_probs=94.9
Q ss_pred eEcccCceEEEEEEecCCcEEEEEEe-ecCCcC--------HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEEecc
Q 008898 259 LIGQGGNSKVYRTNHVDGQVAAVKVL-KCTNWS--------EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVYNLL 329 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~g~~~AvK~l-~~~~~~--------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 329 (549)
++++|+-+.+|.+.+.+ ..+++|.- ++.-.. .....+|..++.++.--.|.--+=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 57899999999997643 34666653 222111 134677999999886544444444555667788999999
Q ss_pred CCC-HHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 330 NGS-LKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 330 ~gs-L~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
.|. |.+++... ...++..+-.-+.-||.. ||+|+||.++||++..+ .+.++|||++.+
T Consensus 82 ~G~~lkd~l~~~----~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~--~i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGG--RIYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCC--cEEEEECCcccc
Confidence 886 55577554 356777888888999999 99999999999999987 499999999843
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.08 E-value=2.1e-11 Score=135.41 Aligned_cols=267 Identities=21% Similarity=0.227 Sum_probs=172.3
Q ss_pred hcCCCCCceEcccCceEEEEEEe-cCCcEEEEEEeecCCcC----HHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEE
Q 008898 251 THNFSPKMLIGQGGNSKVYRTNH-VDGQVAAVKVLKCTNWS----EEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 251 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~~AvK~l~~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv 325 (549)
.+.|.+.+-+-.|.|+.++.+.. ..|...+.|+......- .+....+-.++-...||.++...--+......+++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 35666777788999999998765 33555566655433211 12222333333334456666544444456778899
Q ss_pred Eecc-CCCHHHHHHHhc---hhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccc-
Q 008898 326 YNLL-NGSLKQYLKQLK---WNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQS- 400 (549)
Q Consensus 326 ~e~~-~gsL~~~l~~~~---~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~- 400 (549)
++|. +|+|...|.... ..........+..+++|||.. .++|+|++|.|++...+ ++.+++|||......-.
T Consensus 883 ~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~-gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYD-GHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhccc-CCcccCcccccccccccc
Confidence 9998 567877775432 333444566788899999998 89999999999999999 78999999843211100
Q ss_pred ---c--------------------cccc--CccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCc
Q 008898 401 ---H--------------------QVSE--NVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTN 455 (549)
Q Consensus 401 ---~--------------------~~~~--~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 455 (549)
. .... ........||+.|.|||...+......+|+|++|++++|.++|.+||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 0000 01223568999999999999999999999999999999999999999877
Q ss_pred ccchhhHHHHHHHhhcccccccccCCccc-ccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCchhhhhhhHHH
Q 008898 456 KANRESLVLWARSLLSSGLCERLIDPQLN-EEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLKLFQEPDYWLKMKREKE 534 (549)
Q Consensus 456 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~~~~w~~~~~~~~ 534 (549)
...+.. ..+..-... ..-..+......+++...+..+|.+|-.+.--.+ ..-|++|....+..
T Consensus 1039 tpq~~f--------------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e--~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1039 TPQQIF--------------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAE--VKGHPFFQDVDWEN 1102 (1205)
T ss_pred chhhhh--------------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccc--cccCCccCCCCccc
Confidence 654321 111111111 1112233455667777888999999988872222 12255555555444
Q ss_pred HHH
Q 008898 535 ELL 537 (549)
Q Consensus 535 ~~~ 537 (549)
..+
T Consensus 1103 l~~ 1105 (1205)
T KOG0606|consen 1103 LAL 1105 (1205)
T ss_pred ccc
Confidence 333
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.03 E-value=1.2e-09 Score=105.49 Aligned_cols=138 Identities=20% Similarity=0.302 Sum_probs=99.5
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCc--CHHHHHHHHHHHhcCCC--CCeeeEEEEEEcCC---eEEEEEeccC
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNW--SEEEVLREVELLSSIKH--ENIVRIIGYCHSKE---MYAIVYNLLN 330 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~--~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~---~~~lv~e~~~ 330 (549)
+.||.|.++.||++...+|+.+++|+...... ....+..|.++++.+.+ .++.+++.+...+. ..+++|+++.
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 45899999999999886678999999765433 34578899999999975 44677787776542 6689999996
Q ss_pred C-CHHHHH--HHhchhHHHHHHHHHHHHHHHHHhC---------------------------------------------
Q 008898 331 G-SLKQYL--KQLKWNERMDVAIGVAKALEYLHHT--------------------------------------------- 362 (549)
Q Consensus 331 g-sL~~~l--~~~~~~~~~~i~~~i~~aL~yLH~~--------------------------------------------- 362 (549)
| ++.+.+ ..++......++.+++++|.+||+.
T Consensus 84 G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (223)
T cd05154 84 GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRW 163 (223)
T ss_pred CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 5 454433 1234444555666666666666642
Q ss_pred --------CCCCEEEecCCCCCEEEecC-CCceEEeeecccc
Q 008898 363 --------CDPPIIHRDVKSSNILLSEN-FHHPQLSDFGAAM 395 (549)
Q Consensus 363 --------~~~~iiHrDlkp~NILl~~~-~~~~kL~DFGla~ 395 (549)
....++|+|+.|.||+++.+ .+.+.|+||+.+.
T Consensus 164 ~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 164 LEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 12468999999999999983 2467899999874
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.99 E-value=6.4e-09 Score=95.31 Aligned_cols=137 Identities=25% Similarity=0.307 Sum_probs=99.9
Q ss_pred CCceEcccCceEEEEEEecCCcEEEEEEeecCC-c--------CHHHHHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE
Q 008898 256 PKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTN-W--------SEEEVLREVELLSSIKHENIVRIIGYCHSKEMYAIVY 326 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~-~--------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~ 326 (549)
...+|-+|+-++|+++.. .|+.+.||.-.... . ......+|+.+|.++.--.|.--.-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 567899999999999987 57777777542211 1 1245678999998876434333333445556667889
Q ss_pred eccCC--CHHHHHHHh----chhH-HHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCce--EEeeeccccc
Q 008898 327 NLLNG--SLKQYLKQL----KWNE-RMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHP--QLSDFGAAMV 396 (549)
Q Consensus 327 e~~~g--sL~~~l~~~----~~~~-~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~--kL~DFGla~~ 396 (549)
||+.| ++.+|+... .... ...++..|-+.+.-||.+ +|||+||..+||++.++.... .++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99988 788888542 1222 257888999999999999 999999999999998764443 7999999743
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.83 E-value=2.2e-08 Score=94.37 Aligned_cols=121 Identities=25% Similarity=0.336 Sum_probs=81.7
Q ss_pred EEEEEEecCCcEEEEEEeecCCcC---------------------------HHHHHHHHHHHhcCCCC--CeeeEEEEEE
Q 008898 267 KVYRTNHVDGQVAAVKVLKCTNWS---------------------------EEEVLREVELLSSIKHE--NIVRIIGYCH 317 (549)
Q Consensus 267 ~Vy~~~~~~g~~~AvK~l~~~~~~---------------------------~~~~~~E~~il~~l~h~--nIv~l~~~~~ 317 (549)
.||.|...+|..+|||+.+..... .....+|.+.|.++..- ++.+.+.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489998888999999998542110 12356799999999765 456666553
Q ss_pred cCCeEEEEEeccC--CCHHHHHHHhc--hhHHHHHHHHHHHHHHH-HHhCCCCCEEEecCCCCCEEEecCCCceEEeeec
Q 008898 318 SKEMYAIVYNLLN--GSLKQYLKQLK--WNERMDVAIGVAKALEY-LHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFG 392 (549)
Q Consensus 318 ~~~~~~lv~e~~~--gsL~~~l~~~~--~~~~~~i~~~i~~aL~y-LH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFG 392 (549)
..+|||||++ |.....+.... ......++.+++..+.. +|.. ||+|+||.+.|||++++ .+.++|||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~--~~~iIDf~ 151 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG--KVYIIDFG 151 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT--CEEE--GT
T ss_pred ---CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc--eEEEEecC
Confidence 3479999997 75334444433 45566778888886665 5677 99999999999999987 69999999
Q ss_pred cccc
Q 008898 393 AAMV 396 (549)
Q Consensus 393 la~~ 396 (549)
.+..
T Consensus 152 qav~ 155 (188)
T PF01163_consen 152 QAVD 155 (188)
T ss_dssp TEEE
T ss_pred ccee
Confidence 8843
No 449
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=98.78 E-value=8.9e-08 Score=84.39 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=88.1
Q ss_pred cEEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCcccc-------ch-H--------HHHHHhhhccCceEEE
Q 008898 23 RTVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDTLDL-------NT-F--------HIHEDLCKSKKVDFLV 86 (549)
Q Consensus 23 ~~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~~~-------~~-~--------~~~~~~c~~k~~~~~~ 86 (549)
++|||++|.+..++.++.||+....+.|+.|++|||......... .. . ......+...+.....
T Consensus 3 ~~Ilv~~d~~~~~~~al~~a~~la~~~~~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
T PF00582_consen 3 KRILVAIDGSEESRRALRFALELAKRSGAEITLLHVIPPPPQYSFSAAEDEESEEEAEEEEQARQAEAEEAEAEGGIVIE 82 (140)
T ss_dssp SEEEEEESSSHHHHHHHHHHHHHHHHHTCEEEEEEEEESCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHhhCCeEEEEEeeccccccccccccccccccccchhhhhhhHHHHHHhhhccceeE
Confidence 699999999999999999999999999999999999965442111 00 0 0001234455555555
Q ss_pred EEEecCcchhhHHHHHhhhcccEEEEecccC----CCCchhHHHHHhhhCCCCcEEEEe
Q 008898 87 KVCIGDSYITELSNQVRISYATILALGCSLS----GLKDSEVLTRCLRALPPACTILVM 141 (549)
Q Consensus 87 ~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~----~~~~~~v~~~c~~~~~~~c~v~~v 141 (549)
.+..+.+..+.++++++...++.||+|.+.. +.-.+.++.++++++| |-|+.|
T Consensus 83 ~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~~~~gs~~~~l~~~~~--~pVlvv 139 (140)
T PF00582_consen 83 VVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLERLLFGSVAEKLLRHAP--CPVLVV 139 (140)
T ss_dssp EEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTTSSSHHHHHHHHHHTS--SEEEEE
T ss_pred EEEEeeccchhhhhccccccceeEEEeccCCCCccCCCcCCHHHHHHHcCC--CCEEEe
Confidence 5555668888999999999999999999985 2122349999999999 877665
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.74 E-value=3.9e-07 Score=93.15 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=153.0
Q ss_pred CCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcC-CCCCeee--------EEEEEEcCCeEEEE
Q 008898 255 SPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSI-KHENIVR--------IIGYCHSKEMYAIV 325 (549)
Q Consensus 255 ~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l-~h~nIv~--------l~~~~~~~~~~~lv 325 (549)
.....||+|+-+.+|-.....+ .+.|+....... .....+..|... .||-+.. |+|- ......-++
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d--~VAKIYh~Pppa--~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD--QVAKIYHAPPPA--AQAQKVAELAATPDAPLLNYRVAWPQATLHGG-RRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecchhhc--hhheeecCCCch--HHHHHHHHhccCCCCcchhhhhcccHHHhhCC-CccceeEEe
Confidence 3456799999999997533222 244666433211 111223334333 4554332 1111 122336677
Q ss_pred EeccCC--CHHHHHH---------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 326 YNLLNG--SLKQYLK---------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 326 ~e~~~g--sL~~~l~---------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
|..+.| ....+++ ...|...++++..++.+..-||+. |.+-+|+.++|+|++++ +.+.|.|-..-
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~-~~V~LVdsDsf 164 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDD-SKVVLVDSDSF 164 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecC-ceEEEEcccce
Confidence 777755 3444442 267888999999999999999999 99999999999999999 68888875433
Q ss_pred cccccccccccCccccccccCCccccccccc-----cCCCCchhhHHHHHHHHHHHHcC-CCCCCCcccc---hhhHH-H
Q 008898 395 MVHHQSHQVSENVKPVNVVGTFGYLAPEYMM-----YGKVDEKIDVYSYGVVLLELITG-KEAIQTNKAN---RESLV-L 464 (549)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG-~~p~~~~~~~---~~~l~-~ 464 (549)
.... .+......+|...|.+||... +-.-+...|.|.|||+++++|.| ++||.+-... ..-+. .
T Consensus 165 qi~~------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 165 QINA------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred eecc------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 2221 122334568999999999765 33457789999999999999887 9999764321 11111 1
Q ss_pred HHHHhhcc-cccccccCCcccccCCHHHHHHHHHHHHHhccc--CCCCCCCHHHHHHHhcC
Q 008898 465 WARSLLSS-GLCERLIDPQLNEEYNREEIEIVMCAARLCLLH--SSSRRPTMKTLLKLFQE 522 (549)
Q Consensus 465 ~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~--dP~~RPs~~evl~~L~~ 522 (549)
.+...+-. .....-..+......-...+..+.-+...|+.. ++.-|||++-.+.-|..
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~a 299 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDA 299 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Confidence 11111100 000011111111111123345566677788876 46799999988776644
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=4.1e-07 Score=90.83 Aligned_cols=134 Identities=17% Similarity=0.140 Sum_probs=94.4
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcC------------HHHHHHHHHHHhcCCCCC--eeeEEEEEEc-----
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS------------EEEVLREVELLSSIKHEN--IVRIIGYCHS----- 318 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~------------~~~~~~E~~il~~l~h~n--Iv~l~~~~~~----- 318 (549)
+++-......|++... +|+.+.||......+. ...+.+|...+..|...+ ....+++.+.
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455555556777655 6788999977543311 124778988887774322 3344444432
Q ss_pred CCeEEEEEeccCC--CHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecC------CCc
Q 008898 319 KEMYAIVYNLLNG--SLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSEN------FHH 385 (549)
Q Consensus 319 ~~~~~lv~e~~~g--sL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~------~~~ 385 (549)
...-++|+|++.| +|.+++.. ........++.+++..+.-||.. ||+|+|+++.|||++.+ ...
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 2356789999977 68888753 23345667899999999999999 99999999999999851 247
Q ss_pred eEEeeecccc
Q 008898 386 PQLSDFGAAM 395 (549)
Q Consensus 386 ~kL~DFGla~ 395 (549)
+.|+||+.+.
T Consensus 184 ~~LIDl~r~~ 193 (268)
T PRK15123 184 LSVIDLHRAQ 193 (268)
T ss_pred EEEEECCccc
Confidence 8999999874
No 452
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.66 E-value=7.2e-09 Score=111.65 Aligned_cols=154 Identities=21% Similarity=0.327 Sum_probs=105.4
Q ss_pred HHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccccccc----ccCccccccccCCcccccccccc
Q 008898 351 GVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQV----SENVKPVNVVGTFGYLAPEYMMY 426 (549)
Q Consensus 351 ~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~----~~~~~~~~~~gt~~y~APE~~~~ 426 (549)
+++.||.|+|... ++||++|.|++|.++.+ +..||+.|+++......... .+.....-..-...|.|||++.+
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~-~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNAN-GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccC-cceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 4559999999886 99999999999999999 78999999988654442110 11111111223568999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCC-CCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhccc
Q 008898 427 GKVDEKIDVYSYGVVLLELITGKEA-IQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLH 505 (549)
Q Consensus 427 ~~~~~k~DvwSlGvil~elltG~~p-~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~ 505 (549)
...+.++|+||+||++|.+..|..+ +........ . ......+..-...++.+.+..+.+-+.+++..
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~--~----------~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~ 251 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS--Y----------SFSRNLLNAGAFGYSNNLPSELRESLKKLLNG 251 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcch--h----------hhhhcccccccccccccCcHHHHHHHHHHhcC
Confidence 8889999999999999999955444 443322110 0 01111112222234455666777777899999
Q ss_pred CCCCCCCHHHHHHH
Q 008898 506 SSSRRPTMKTLLKL 519 (549)
Q Consensus 506 dP~~RPs~~evl~~ 519 (549)
++.-||++.++...
T Consensus 252 ~~~~rp~~~~l~~~ 265 (700)
T KOG2137|consen 252 DSAVRPTLDLLLSI 265 (700)
T ss_pred CcccCcchhhhhcc
Confidence 99999988887653
No 453
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=98.61 E-value=4.3e-07 Score=79.55 Aligned_cols=115 Identities=13% Similarity=0.122 Sum_probs=87.5
Q ss_pred EEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCcc-c---cchHHHHHHhhhccCceEEEEEEecCcchhhHH
Q 008898 24 TVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDTL-D---LNTFHIHEDLCKSKKVDFLVKVCIGDSYITELS 99 (549)
Q Consensus 24 ~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~-~---~~~~~~~~~~c~~k~~~~~~~v~~g~~~~~~l~ 99 (549)
+|||++|.+..++++|.||.....+.|..+.+|||..+.... . .+.+..+..+++..+++ ..+..+.++..+|+
T Consensus 1 ~Ilv~vd~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~I~ 78 (124)
T cd01987 1 RILVCISGGPNAERLIRRAARLADRLKAPWYVVYVETPRLNRLSEAERRRLAEALRLAEELGAE--VVTLPGDDVAEAIV 78 (124)
T ss_pred CEEEEECCCcchHHHHHHHHHHHHHhCCCEEEEEEecCccccCCHHHHHHHHHHHHHHHHcCCE--EEEEeCCcHHHHHH
Confidence 599999999999999999999988999999999999654321 1 13335556667665654 34556667889999
Q ss_pred HHHhhhcccEEEEecccCC----CCchhHHHHHhhhCCCCcEEEEe
Q 008898 100 NQVRISYATILALGCSLSG----LKDSEVLTRCLRALPPACTILVM 141 (549)
Q Consensus 100 ~e~k~~~~~~lvlg~~~~~----~~~~~v~~~c~~~~~~~c~v~~v 141 (549)
++|+...++.||+|.+... .-.+.++.+.+.++ +.|.|+.+
T Consensus 79 ~~~~~~~~dllviG~~~~~~~~~~~~Gs~~~~v~~~a-~~~~v~v~ 123 (124)
T cd01987 79 EFAREHNVTQIVVGKSRRSRWRELFRGSLVDRLLRRA-GNIDVHIV 123 (124)
T ss_pred HHHHHcCCCEEEeCCCCCchHHHHhcccHHHHHHHhC-CCCeEEEe
Confidence 9999999999999999661 11123888888888 55877654
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.57 E-value=2.6e-07 Score=90.13 Aligned_cols=130 Identities=24% Similarity=0.300 Sum_probs=93.6
Q ss_pred CCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC-----------------------HHHHHHHHHHHhcCCCC--Ce
Q 008898 255 SPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS-----------------------EEEVLREVELLSSIKHE--NI 309 (549)
Q Consensus 255 ~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~-----------------------~~~~~~E~~il~~l~h~--nI 309 (549)
.+...||.|--|.||.|....|.++|||.=+....+ .....+|.++|..|... .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 355679999999999999989999999964321111 12356899999999755 56
Q ss_pred eeEEEEEEcCCeEEEEEeccCCC-HHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEE
Q 008898 310 VRIIGYCHSKEMYAIVYNLLNGS-LKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQL 388 (549)
Q Consensus 310 v~l~~~~~~~~~~~lv~e~~~gs-L~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL 388 (549)
.+-+++ +...++||++.|- |... + ++....-.++..|++-+.-+-.. ||||+|+.+-||++++| |.+.+
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~-r-~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d-g~~~v 243 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRL-R-LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED-GDIVV 243 (304)
T ss_pred CCcccc----ccceeeeehcccceeecc-c-CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC-CCEEE
Confidence 655554 6778999999874 3221 1 12333444555555555555566 99999999999999999 68999
Q ss_pred eeeccc
Q 008898 389 SDFGAA 394 (549)
Q Consensus 389 ~DFGla 394 (549)
+||--+
T Consensus 244 IDwPQ~ 249 (304)
T COG0478 244 IDWPQA 249 (304)
T ss_pred EeCccc
Confidence 999765
No 455
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.56 E-value=3.8e-06 Score=88.10 Aligned_cols=160 Identities=20% Similarity=0.255 Sum_probs=117.8
Q ss_pred eEEEEEEe-cCCcEEEEEEeecCC-cCHHHHHHHHHHHhcCCCCCeeeEEEEEE----cCCeEEEEEeccC--CCHHHHH
Q 008898 266 SKVYRTNH-VDGQVAAVKVLKCTN-WSEEEVLREVELLSSIKHENIVRIIGYCH----SKEMYAIVYNLLN--GSLKQYL 337 (549)
Q Consensus 266 g~Vy~~~~-~~g~~~AvK~l~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~----~~~~~~lv~e~~~--gsL~~~l 337 (549)
.+.|++.. .||..|++|++.-.. ........-+++.+++.|+|+|++..++. .+..+++||+|.. ++|.++.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 57899965 789999999994322 12223445688999999999999988775 4568999999984 5777765
Q ss_pred H------------------HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeecccccccc
Q 008898 338 K------------------QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQ 399 (549)
Q Consensus 338 ~------------------~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~ 399 (549)
- ..++...|.++.|+..||.++|+. |+.-+-|.|.+|+++.+. .++|+..|...+...
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~-RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKM-RIRISGCGIMDVLQE 445 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcc-eEEEecccceeeecC
Confidence 1 144567889999999999999999 999999999999999884 677766665433211
Q ss_pred ccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 008898 400 SHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEA 451 (549)
Q Consensus 400 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p 451 (549)
.. .+| +.. -.+-|.=.||.+++.|.||..-
T Consensus 446 d~-----------------~~~--le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DP-----------------TEP--LES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CC-----------------Ccc--hhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 00 011 111 1457889999999999999543
No 456
>PRK15005 universal stress protein F; Provisional
Probab=98.50 E-value=1.4e-06 Score=78.30 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=86.3
Q ss_pred cEEEEEEecChh--hHHHHHHHHHHhcCCCCeEEEEEeeccCCcc--------cc---------chHHHHHHhhhcc---
Q 008898 23 RTVIFGLKSDHY--SREILLQLLTVIAKPGDNVLAVHVEEQNDTL--------DL---------NTFHIHEDLCKSK--- 80 (549)
Q Consensus 23 ~~~~v~~~~~~~--~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~--------~~---------~~~~~~~~~c~~k--- 80 (549)
++|||++|.+.+ ++.++.||+....+.|..|.+|||..+.... .. .....++.+++..
T Consensus 3 ~~ILv~~D~s~~~~~~~a~~~a~~la~~~~~~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 82 (144)
T PRK15005 3 RTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLP 82 (144)
T ss_pred ccEEEecCCCchhHHHHHHHHHHHHHhccCCeEEEEEEEccCcccccccccccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 589999999997 6899999999888899999999998542110 00 1113455666543
Q ss_pred CceEEEEEEecCcchhhHHHHHhhhcccEEEEecccCCC---CchhHHHHHhhhCCCCcEEEEe
Q 008898 81 KVDFLVKVCIGDSYITELSNQVRISYATILALGCSLSGL---KDSEVLTRCLRALPPACTILVM 141 (549)
Q Consensus 81 ~~~~~~~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~~~---~~~~v~~~c~~~~~~~c~v~~v 141 (549)
.+.++..+..|.+ ...|++.|+...++.||+|.++... -.+.++.++.++++ |-|+.|
T Consensus 83 ~~~~~~~v~~G~p-~~~I~~~a~~~~~DLIV~Gs~~~~~~~~llGS~a~~vl~~a~--cpVlvV 143 (144)
T PRK15005 83 TDRVHVHVEEGSP-KDRILELAKKIPADMIIIASHRPDITTYLLGSNAAAVVRHAE--CSVLVV 143 (144)
T ss_pred CCceEEEEeCCCH-HHHHHHHHHHcCCCEEEEeCCCCCchheeecchHHHHHHhCC--CCEEEe
Confidence 4567888888966 5689999999999999999875411 11238899998888 877765
No 457
>PRK15456 universal stress protein UspG; Provisional
Probab=98.49 E-value=1.3e-06 Score=78.52 Aligned_cols=115 Identities=14% Similarity=0.159 Sum_probs=83.8
Q ss_pred cEEEEEEecC--hhhHHHHHHHHHHhcCCCCeEEEEEeeccCCccc-----c--chH---------HHHHHhhhc---cC
Q 008898 23 RTVIFGLKSD--HYSREILLQLLTVIAKPGDNVLAVHVEEQNDTLD-----L--NTF---------HIHEDLCKS---KK 81 (549)
Q Consensus 23 ~~~~v~~~~~--~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~~-----~--~~~---------~~~~~~c~~---k~ 81 (549)
++|||++|.+ ..|..+|.||+.. |+.+..|.+|||..+..... . ..+ ..++.+++. .+
T Consensus 3 ~~ILv~vD~S~~~~s~~al~~A~~l-a~~~~~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 81 (142)
T PRK15456 3 KTIIMPVDVFEMELSDKAVRHAEFL-AQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAEERLQTMVSHFTIDP 81 (142)
T ss_pred ccEEEeccCCchhHHHHHHHHHHHH-HhcCCeEEEEEEecCcccccccccccchhhHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 6899999998 4899999999965 66678999999986532110 0 111 334555543 34
Q ss_pred ceEEEEEEecCcchhhHHHHHhhhcccEEEEecccCCC---CchhHHHHHhhhCCCCcEEEEe
Q 008898 82 VDFLVKVCIGDSYITELSNQVRISYATILALGCSLSGL---KDSEVLTRCLRALPPACTILVM 141 (549)
Q Consensus 82 ~~~~~~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~~~---~~~~v~~~c~~~~~~~c~v~~v 141 (549)
++++..+..|.+ ...|++.|+...|+.||+|++.+.. -.+.++.+..++++ |-|+.|
T Consensus 82 ~~v~~~v~~G~~-~~~I~~~a~~~~~DLIVmG~~g~~~~~~llGS~a~~v~~~a~--~pVLvV 141 (142)
T PRK15456 82 SRIKQHVRFGSV-RDEVNELAEELGADVVVIGSRNPSISTHLLGSNASSVIRHAN--LPVLVV 141 (142)
T ss_pred cceEEEEcCCCh-HHHHHHHHhhcCCCEEEEcCCCCCccceecCccHHHHHHcCC--CCEEEe
Confidence 567777888855 5679999999999999999986521 11238889998888 888765
No 458
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=98.49 E-value=1.1e-06 Score=79.22 Aligned_cols=117 Identities=13% Similarity=0.180 Sum_probs=86.0
Q ss_pred CcEEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccC-Cc------ccc---------chHHHHHHhhhccCceEE
Q 008898 22 KRTVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQN-DT------LDL---------NTFHIHEDLCKSKKVDFL 85 (549)
Q Consensus 22 ~~~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~-~~------~~~---------~~~~~~~~~c~~k~~~~~ 85 (549)
-++|||++|.|..|+.+|.||+.-....|..|++|||..+. .. ... +....++.++...++++.
T Consensus 3 ~~~ILvavD~S~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 82 (144)
T PRK15118 3 YKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPIT 82 (144)
T ss_pred ceEEEEEccCChhHHHHHHHHHHHHHhhCCEEEEEEEccChhhhhhhhhhcchHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 36899999999999999999999776778899999994221 10 000 001334666666677764
Q ss_pred EEE-EecCcchhhHHHHHhhhcccEEEEecccC--CCCchhHHHHHhhhCCCCcEEEEec
Q 008898 86 VKV-CIGDSYITELSNQVRISYATILALGCSLS--GLKDSEVLTRCLRALPPACTILVMD 142 (549)
Q Consensus 86 ~~v-~~g~~~~~~l~~e~k~~~~~~lvlg~~~~--~~~~~~v~~~c~~~~~~~c~v~~v~ 142 (549)
..+ ..|.+ ..+|+++|+...++.||+|.+.. +.-.| ++.+..++++ |-|+.|-
T Consensus 83 ~~~~~~G~p-~~~I~~~a~~~~~DLIV~Gs~~~~~~~lgS-va~~v~~~a~--~pVLvv~ 138 (144)
T PRK15118 83 ETLSGSGDL-GQVLVDAIKKYDMDLVVCGHHQDFWSKLMS-SARQLINTVH--VDMLIVP 138 (144)
T ss_pred EEEEEecCH-HHHHHHHHHHhCCCEEEEeCcccHHHHHHH-HHHHHHhhCC--CCEEEec
Confidence 444 46765 66899999999999999999954 11124 9999999999 8888774
No 459
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=98.37 E-value=4.1e-06 Score=72.80 Aligned_cols=113 Identities=17% Similarity=0.215 Sum_probs=86.7
Q ss_pred EEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCccc------c-----chHHHHHHhhhccCceEEEEEEecC
Q 008898 24 TVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDTLD------L-----NTFHIHEDLCKSKKVDFLVKVCIGD 92 (549)
Q Consensus 24 ~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~~------~-----~~~~~~~~~c~~k~~~~~~~v~~g~ 92 (549)
+|+|+++.+..++.++.||+...-+.+..|.+|||..+..... . +.+..+...|...++++...+..|.
T Consensus 1 ~ilv~i~~~~~~~~~l~~a~~~a~~~~~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (130)
T cd00293 1 RILVAVDGSEESERALRWAARLARRLGAELVLLHVVDPPPSSAAELAELLEEEARALLEALREALAEAGVKVETVVLEGD 80 (130)
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 4899999999999999999999999999999999986543310 1 2235556667778999999999888
Q ss_pred cchhhHHHHHhhhcccEEEEecccCCC----CchhHHHHHhhhCCCCcEEE
Q 008898 93 SYITELSNQVRISYATILALGCSLSGL----KDSEVLTRCLRALPPACTIL 139 (549)
Q Consensus 93 ~~~~~l~~e~k~~~~~~lvlg~~~~~~----~~~~v~~~c~~~~~~~c~v~ 139 (549)
+ .++|+++++...++.||+|.+.... ..+.++.+-++..+ |.++
T Consensus 81 ~-~~~i~~~~~~~~~dlvvig~~~~~~~~~~~~~~~~~~ll~~~~--~pvl 128 (130)
T cd00293 81 P-AEAILEAAEELGADLIVMGSRGRSGLRRLLLGSVAERVLRHAP--CPVL 128 (130)
T ss_pred C-HHHHHHHHHHcCCCEEEEcCCCCCccceeeeccHHHHHHhCCC--CCEE
Confidence 7 7899999999999999999886621 11225666665544 5554
No 460
>PRK09982 universal stress protein UspD; Provisional
Probab=98.35 E-value=3.5e-06 Score=75.94 Aligned_cols=115 Identities=9% Similarity=0.111 Sum_probs=83.5
Q ss_pred cEEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCc-------ccc----chH-----HHHHHhhhc-cCceEE
Q 008898 23 RTVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDT-------LDL----NTF-----HIHEDLCKS-KKVDFL 85 (549)
Q Consensus 23 ~~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~-------~~~----~~~-----~~~~~~c~~-k~~~~~ 85 (549)
++|||++|.+..|+.+|.||+...-+.|-.|++|||..+... ... ... ..++.+.+. ....++
T Consensus 4 k~ILvavD~S~~s~~al~~A~~lA~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 83 (142)
T PRK09982 4 KHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTK 83 (142)
T ss_pred eEEEEEecCCcchHHHHHHHHHHHHHhCCeEEEEEEccCcchhchhhhccchHHHHHHHHHHHHHHHHHHHHhcCCCcce
Confidence 689999999999999999999988899999999999853210 000 000 223333332 245677
Q ss_pred EEEEecCcchhhHHHHHhhhcccEEEEecccCC--CCchhHHHHHhhhCCCCcEEEEe
Q 008898 86 VKVCIGDSYITELSNQVRISYATILALGCSLSG--LKDSEVLTRCLRALPPACTILVM 141 (549)
Q Consensus 86 ~~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~~--~~~~~v~~~c~~~~~~~c~v~~v 141 (549)
..+..|.+ ...|++.|+...|+.||+|..++. ...+ ++.+..++++ |-|+.|
T Consensus 84 ~~v~~G~p-~~~I~~~A~~~~aDLIVmG~~~~~~~~~~~-va~~V~~~s~--~pVLvv 137 (142)
T PRK09982 84 LRIERGEM-PETLLEIMQKEQCDLLVCGHHHSFINRLMP-AYRGMINKMS--ADLLIV 137 (142)
T ss_pred EEEEecCH-HHHHHHHHHHcCCCEEEEeCChhHHHHHHH-HHHHHHhcCC--CCEEEe
Confidence 78888865 668999999999999999976331 1114 8888888877 777766
No 461
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.34 E-value=3.7e-06 Score=80.84 Aligned_cols=103 Identities=22% Similarity=0.287 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhcCCC--CCeeeEEEEEEcC----CeEEEEEeccCC--CHHHHHHH---hchhHHHHHHHHHHHHHHHH
Q 008898 291 EEEVLREVELLSSIKH--ENIVRIIGYCHSK----EMYAIVYNLLNG--SLKQYLKQ---LKWNERMDVAIGVAKALEYL 359 (549)
Q Consensus 291 ~~~~~~E~~il~~l~h--~nIv~l~~~~~~~----~~~~lv~e~~~g--sL~~~l~~---~~~~~~~~i~~~i~~aL~yL 359 (549)
.....+|...+..|.. -.+...+++.+.. ...++++|++.| +|.+++.. .+......++.+++..+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 3457788887777753 2344555655442 245788999866 69999876 45566778999999999999
Q ss_pred HhCCCCCEEEecCCCCCEEEecCC--CceEEeeeccccc
Q 008898 360 HHTCDPPIIHRDVKSSNILLSENF--HHPQLSDFGAAMV 396 (549)
Q Consensus 360 H~~~~~~iiHrDlkp~NILl~~~~--~~~kL~DFGla~~ 396 (549)
|.. ||+|+|+++.|||++.+. ..+.|+||+-+..
T Consensus 135 H~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 135 HDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999 999999999999999872 1688999997743
No 462
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.33 E-value=6.2e-06 Score=80.44 Aligned_cols=131 Identities=15% Similarity=0.240 Sum_probs=84.2
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCC--eeeEEEEEEcCCeEEEEEeccCCC--H
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHEN--IVRIIGYCHSKEMYAIVYNLLNGS--L 333 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~n--Iv~l~~~~~~~~~~~lv~e~~~gs--L 333 (549)
..||+|..+.||+. .|..+++|.... ......+.+|.++++.+..-. +.+.+++....+.+.++|+++.|. +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~-~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNP-GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 46899999999984 245677888764 334566889999999886433 467788887788888999999773 2
Q ss_pred HHHHHHhchhHHHHHHHH--------------------------------------HHH-HHHHHHhCC-CCCEEEecCC
Q 008898 334 KQYLKQLKWNERMDVAIG--------------------------------------VAK-ALEYLHHTC-DPPIIHRDVK 373 (549)
Q Consensus 334 ~~~l~~~~~~~~~~i~~~--------------------------------------i~~-aL~yLH~~~-~~~iiHrDlk 373 (549)
...+.. .......++.. +.+ ...+|.... ...++|+|+.
T Consensus 83 ~~~~~~-~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 83 SRIISD-NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhcC-CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 211100 00000001111 111 122332221 2357899999
Q ss_pred CCCEEEecCCCceEEeeecccc
Q 008898 374 SSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 374 p~NILl~~~~~~~kL~DFGla~ 395 (549)
|.||+++++ + +.++||+.+.
T Consensus 162 ~~Nii~~~~-~-~~iIDwe~a~ 181 (226)
T TIGR02172 162 IGNLITSGK-G-TYWIDLGDFG 181 (226)
T ss_pred CCcEEEcCC-C-cEEEechhcC
Confidence 999999987 5 8999999873
No 463
>PRK09902 hypothetical protein; Provisional
Probab=98.29 E-value=8.1e-06 Score=77.84 Aligned_cols=130 Identities=17% Similarity=0.232 Sum_probs=95.4
Q ss_pred EcccCceEEEEEEecCCcEEEEEEeec----C---CcCHHHHHHHHHHHhcCCCC--CeeeEEEEEE-c----CCeEEEE
Q 008898 260 IGQGGNSKVYRTNHVDGQVAAVKVLKC----T---NWSEEEVLREVELLSSIKHE--NIVRIIGYCH-S----KEMYAIV 325 (549)
Q Consensus 260 lG~G~fg~Vy~~~~~~g~~~AvK~l~~----~---~~~~~~~~~E~~il~~l~h~--nIv~l~~~~~-~----~~~~~lv 325 (549)
-|+||-+-|++... +|+.+-+|.-.. + ......|.+|...|..|..- .+.+.. ++. . ...-+||
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 47899999999776 344688887641 1 22456789999999888532 244444 332 1 1246788
Q ss_pred EeccCC--CHHHHHHH-----hchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCc--eEEeeecccc
Q 008898 326 YNLLNG--SLKQYLKQ-----LKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHH--PQLSDFGAAM 395 (549)
Q Consensus 326 ~e~~~g--sL~~~l~~-----~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~--~kL~DFGla~ 395 (549)
.|-++| +|.+++.. .+...+..+..+++.++.-||.. |+.|+|+.+.|||++.+ +. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCC-CCeeEEEEEhhccc
Confidence 887864 79999855 24455678999999999999999 99999999999999855 35 8999998653
No 464
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.28 E-value=1.7e-05 Score=75.53 Aligned_cols=131 Identities=25% Similarity=0.411 Sum_probs=95.9
Q ss_pred CCceEcccCceEEEEEEecCCcEEEEEEeecCC-----------------cCHHHHHHHHHHHhcCC------CCCeeeE
Q 008898 256 PKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTN-----------------WSEEEVLREVELLSSIK------HENIVRI 312 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~-----------------~~~~~~~~E~~il~~l~------h~nIv~l 312 (549)
...+||+|+.-.||. |.+.....||+..... ....+..+|+.-...+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 345799999999995 5556667889987655 12355677777665555 7899999
Q ss_pred EEEEEcCCeEEEEEecc---CC----CHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCC-C
Q 008898 313 IGYCHSKEMYAIVYNLL---NG----SLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENF-H 384 (549)
Q Consensus 313 ~~~~~~~~~~~lv~e~~---~g----sL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~-~ 384 (549)
+|+.+++....+|+|.+ +| +|.++++.-.... .+...+-+-..||-.. +|+.+|++|.||++.... +
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~--~~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~~~~~~~ 157 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE--ELRQALDEFKRYLLDH---HIVIRDLNPHNIVVQRRDSG 157 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH--HHHHHHHHHHHHHHHc---CCeecCCCcccEEEEecCCC
Confidence 99999999999999987 34 5888886543333 4444555667788888 999999999999996442 1
Q ss_pred --ceEEee-ecc
Q 008898 385 --HPQLSD-FGA 393 (549)
Q Consensus 385 --~~kL~D-FGl 393 (549)
.+.|+| ||-
T Consensus 158 ~~~lvlIDG~G~ 169 (199)
T PF10707_consen 158 EFRLVLIDGLGE 169 (199)
T ss_pred ceEEEEEeCCCC
Confidence 466777 443
No 465
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=98.23 E-value=1.9e-05 Score=69.53 Aligned_cols=116 Identities=14% Similarity=0.210 Sum_probs=89.6
Q ss_pred EEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCccc------c-----chHHHHHHhhhccCceEEEEEEecC
Q 008898 24 TVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDTLD------L-----NTFHIHEDLCKSKKVDFLVKVCIGD 92 (549)
Q Consensus 24 ~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~~------~-----~~~~~~~~~c~~k~~~~~~~v~~g~ 92 (549)
+|||+++.+..+..+|.||..-.-+.+=.|+++||..+..... . ..+..+..++...+++++..+..+.
T Consensus 1 ~ILv~vd~s~~~~~~l~~a~~la~~~~~~v~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (132)
T cd01988 1 RILVPVANPNTARDLLELAAALARAQNGEIIPLNVIEVPNHSSPSQLEVNVQRARKLLRQAERIAASLGVPVHTIIRIDH 80 (132)
T ss_pred CEEEecCCchhHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCCceEEEEEecC
Confidence 5999999999999999999998888888999999996543221 0 2225556677777888887776655
Q ss_pred cchhhHHHHHhhhcccEEEEecccCCCC----chhHHHHHhhhCCCCcEEEEe
Q 008898 93 SYITELSNQVRISYATILALGCSLSGLK----DSEVLTRCLRALPPACTILVM 141 (549)
Q Consensus 93 ~~~~~l~~e~k~~~~~~lvlg~~~~~~~----~~~v~~~c~~~~~~~c~v~~v 141 (549)
+....|++.|+...++.||+|....... .+.++.+..++++ |.|+.+
T Consensus 81 ~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~~~lGs~~~~v~~~~~--~pvlvv 131 (132)
T cd01988 81 DIASGILRTAKERQADLIIMGWHGSTSLRDRLFGGVIDQVLESAP--CDVAVV 131 (132)
T ss_pred CHHHHHHHHHHhcCCCEEEEecCCCCCccceecCchHHHHHhcCC--CCEEEe
Confidence 6778899999999999999999976221 1237888888888 877655
No 466
>PRK10116 universal stress protein UspC; Provisional
Probab=98.23 E-value=1.4e-05 Score=71.74 Aligned_cols=116 Identities=7% Similarity=0.149 Sum_probs=85.9
Q ss_pred CcEEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCcc-cc-----chH---------HHHHHhhhccCceEE-
Q 008898 22 KRTVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDTL-DL-----NTF---------HIHEDLCKSKKVDFL- 85 (549)
Q Consensus 22 ~~~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~-~~-----~~~---------~~~~~~c~~k~~~~~- 85 (549)
-++|||++|.|..+..+|.+|+.-..+-|..|.+||+....... .. +.+ ..++.++..-+++..
T Consensus 3 ~~~ILv~~D~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 82 (142)
T PRK10116 3 YSNILVAVAVTPESQQLLAKAVSIARPVNGKISLITLASDPEMYNQFAAPMLEDLRSVMQEETQSFLDKLIQDADYPIEK 82 (142)
T ss_pred CceEEEEccCCcchHHHHHHHHHHHHHhCCEEEEEEEccCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 36999999999999999999999877778899999997443211 00 011 234555665566554
Q ss_pred EEEEecCcchhhHHHHHhhhcccEEEEecccC----CCCchhHHHHHhhhCCCCcEEEEec
Q 008898 86 VKVCIGDSYITELSNQVRISYATILALGCSLS----GLKDSEVLTRCLRALPPACTILVMD 142 (549)
Q Consensus 86 ~~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~----~~~~~~v~~~c~~~~~~~c~v~~v~ 142 (549)
..+..|.+ ..++++.|+...++.||+|++.. +. .+ ++.+++++++ |-|+.|-
T Consensus 83 ~~~~~G~~-~~~I~~~a~~~~~DLiV~g~~~~~~~~~~-~s-~a~~v~~~~~--~pVLvv~ 138 (142)
T PRK10116 83 TFIAYGEL-SEHILEVCRKHHFDLVICGNHNHSFFSRA-SC-SAKRVIASSE--VDVLLVP 138 (142)
T ss_pred EEEecCCH-HHHHHHHHHHhCCCEEEEcCCcchHHHHH-HH-HHHHHHhcCC--CCEEEEe
Confidence 44456766 56899999999999999999966 21 24 8889999988 8887774
No 467
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.18 E-value=1.6e-07 Score=100.46 Aligned_cols=179 Identities=21% Similarity=0.207 Sum_probs=130.5
Q ss_pred CceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCC-eeeEEEEEEcCCeEEEEEeccCCC--H
Q 008898 257 KMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHEN-IVRIIGYCHSKEMYAIVYNLLNGS--L 333 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~~lv~e~~~gs--L 333 (549)
..-+++|+++++||.+....+....+.+... ....-++++|.+++||| .+..++-++.++..++.++++.+. -
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~ 322 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSS 322 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccc
Confidence 3447899999999987644454556665433 34556899999999999 777777778888999999998432 1
Q ss_pred HHHH--H--HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEeeeccccccccccccccCccc
Q 008898 334 KQYL--K--QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKP 409 (549)
Q Consensus 334 ~~~l--~--~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 409 (549)
..-. . .+..-+...+...-.+++.|||+. .=+|+| ||+..+. ..++.||+.+.-... ....
T Consensus 323 ~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~~--~~~~~~~~v~~~L~~------~~~~ 387 (829)
T KOG0576|consen 323 ALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSEE--EVKLLDFAVPPQLTR------TMKP 387 (829)
T ss_pred cccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----ccccccc--ccccccccCCcccCc------cccc
Confidence 1111 1 122223334455567789999977 558888 8888876 589999998754332 2245
Q ss_pred cccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 008898 410 VNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQT 454 (549)
Q Consensus 410 ~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 454 (549)
.+..+|+.++|||+...+.+..+.|.|++|+-..+|--|-+|-..
T Consensus 388 ~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred ccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 677899999999999999999999999999987788777777544
No 468
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.10 E-value=3.5e-05 Score=73.80 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=87.7
Q ss_pred hhcCCCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHH----------HHHHHHHHhcCC---CCCeeeEEEEE
Q 008898 250 LTHNFSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEE----------VLREVELLSSIK---HENIVRIIGYC 316 (549)
Q Consensus 250 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~----------~~~E~~il~~l~---h~nIv~l~~~~ 316 (549)
+..+|...+++-......|.+-.. +|+.+.+|..+....-.+. ..+++..+..+. -.....++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 456788888888877777777654 6788999988654322221 223333333332 22222322222
Q ss_pred -----EcCCeEEEEEeccCC-CHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCceEEee
Q 008898 317 -----HSKEMYAIVYNLLNG-SLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHPQLSD 390 (549)
Q Consensus 317 -----~~~~~~~lv~e~~~g-sL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~kL~D 390 (549)
.-...++++|||+.| .|.++.. +.. .++..+.+++.-||+. |+.|+|..|.|++++++ .+++.|
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~--~i~iID 177 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED-IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN--GIRIID 177 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh-cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC--cEEEEE
Confidence 223467789999977 4555431 211 2445677889999999 99999999999999977 499999
Q ss_pred eccc
Q 008898 391 FGAA 394 (549)
Q Consensus 391 FGla 394 (549)
|+..
T Consensus 178 ~~~k 181 (229)
T PF06176_consen 178 TQGK 181 (229)
T ss_pred Cccc
Confidence 9865
No 469
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.05 E-value=3.3e-05 Score=74.85 Aligned_cols=145 Identities=21% Similarity=0.278 Sum_probs=96.9
Q ss_pred cCHHHHHhhhcCCCCCceEc---ccCceEEEEEEecCCcEEEEEEeecCCcCH--------------------HH-----
Q 008898 242 FTSQELCHLTHNFSPKMLIG---QGGNSKVYRTNHVDGQVAAVKVLKCTNWSE--------------------EE----- 293 (549)
Q Consensus 242 ~~~~el~~~~~~f~~~~~lG---~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~--------------------~~----- 293 (549)
.+...+..+.+...+..+.| .|--+.||+|...++..+|+|+.+...... .+
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 45556666677777766655 455668999988889999999987542211 11
Q ss_pred HHHHHHHHhcCC--CCCeeeEEEEEEcCCeEEEEEeccCCC------HHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCC
Q 008898 294 VLREVELLSSIK--HENIVRIIGYCHSKEMYAIVYNLLNGS------LKQYLKQLKWNERMDVAIGVAKALEYLHHTCDP 365 (549)
Q Consensus 294 ~~~E~~il~~l~--h~nIv~l~~~~~~~~~~~lv~e~~~gs------L~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~ 365 (549)
..+|..-|+++. +-.+.+-+++. .-.|+|||++.. |.+.- +...+...+..++++.+.-|-..+
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~--~e~~e~~~~~~~~v~~~~~l~~~a-- 186 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDVP--LELEEAEGLYEDVVEYMRRLYKEA-- 186 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcccCC--cCchhHHHHHHHHHHHHHHHHHhc--
Confidence 345777777663 33444445443 347899999543 33221 122245556677777777776632
Q ss_pred CEEEecCCCCCEEEecCCCceEEeeeccccc
Q 008898 366 PIIHRDVKSSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 366 ~iiHrDlkp~NILl~~~~~~~kL~DFGla~~ 396 (549)
+++|+||..-|||+.+ +.+.++|||-|..
T Consensus 187 ~LVHgDLSEyNiL~~~--~~p~iID~~QaV~ 215 (268)
T COG1718 187 GLVHGDLSEYNILVHD--GEPYIIDVSQAVT 215 (268)
T ss_pred CcccccchhhheEEEC--CeEEEEECccccc
Confidence 9999999999999994 4799999998854
No 470
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.98 E-value=6.1e-05 Score=72.81 Aligned_cols=136 Identities=20% Similarity=0.225 Sum_probs=79.8
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCC--CeeeEEEEEE---cCCeEEEEEeccCCC
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHE--NIVRIIGYCH---SKEMYAIVYNLLNGS 332 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~--nIv~l~~~~~---~~~~~~lv~e~~~gs 332 (549)
+.|+.|..+.||+....+ ..+++|..... .....+..|..+++.+... .+.+++.+.. .....+++|+++.|.
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 468999999999998866 58999987654 3456788899998888533 3556666443 334578899999663
Q ss_pred -HHH----------------HHHH---h-------chhH---------HH-----H-------HHHHHHH-HHHHHHhC-
Q 008898 333 -LKQ----------------YLKQ---L-------KWNE---------RM-----D-------VAIGVAK-ALEYLHHT- 362 (549)
Q Consensus 333 -L~~----------------~l~~---~-------~~~~---------~~-----~-------i~~~i~~-aL~yLH~~- 362 (549)
+.. .+.. . .... .. . ....+.+ .+..++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 444 1110 0 0000 00 0 0112222 33444431
Q ss_pred ---CCCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 363 ---CDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 363 ---~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
....++|+|+.|.|||++++.+.+-|+||+.+.
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 234799999999999999332455799999873
No 471
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.92 E-value=5e-05 Score=82.29 Aligned_cols=134 Identities=22% Similarity=0.245 Sum_probs=84.0
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcC---------------------------H----H----------HHHH
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS---------------------------E----E----------EVLR 296 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~---------------------------~----~----------~~~~ 296 (549)
..|+.++-|.||+|...+|+.||||+..+.-.. . + ++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 579999999999999999999999998653110 0 0 1233
Q ss_pred HHHHHhcC----C-CCCeeeEEE-EEEcCCeEEEEEeccCC-CHHHH--HHHhchhHHHHHHHHHHHH-HHHHHhCCCCC
Q 008898 297 EVELLSSI----K-HENIVRIIG-YCHSKEMYAIVYNLLNG-SLKQY--LKQLKWNERMDVAIGVAKA-LEYLHHTCDPP 366 (549)
Q Consensus 297 E~~il~~l----~-h~nIv~l~~-~~~~~~~~~lv~e~~~g-sL~~~--l~~~~~~~~~~i~~~i~~a-L~yLH~~~~~~ 366 (549)
|..-+.++ + .|++ .+=. |++-...-.++|||+.| .+.+. ++.-... ...++..++++ +..+-.. |
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d-~k~ia~~~~~~f~~q~~~d---g 285 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGID-RKELAELLVRAFLRQLLRD---G 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCC-HHHHHHHHHHHHHHHHHhc---C
Confidence 44433333 2 2332 2222 22334567899999987 46555 3331111 22233333332 2233334 9
Q ss_pred EEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 367 IIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 367 iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
++|.|..|.||+++.+ +.+-+.|||+....
T Consensus 286 ffHaDpHpGNi~v~~~-g~i~~lDfGi~g~l 315 (517)
T COG0661 286 FFHADPHPGNILVRSD-GRIVLLDFGIVGRL 315 (517)
T ss_pred ccccCCCccceEEecC-CcEEEEcCcceecC
Confidence 9999999999999999 78999999997543
No 472
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.88 E-value=0.00017 Score=71.01 Aligned_cols=69 Identities=19% Similarity=0.241 Sum_probs=49.2
Q ss_pred EcccCc-eEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC-CCCeeeEEEEEEcCCeEEEEEeccCC
Q 008898 260 IGQGGN-SKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIK-HENIVRIIGYCHSKEMYAIVYNLLNG 331 (549)
Q Consensus 260 lG~G~f-g~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~g 331 (549)
|-.|.+ ..||+.... +..+.+|+..... ..++.+|+++++.+. +--+.+++++...++..+++|+++.|
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 76 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG 76 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence 344555 789998764 4678888876443 345778999988884 34456778877766678899999966
No 473
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.87 E-value=0.00011 Score=67.50 Aligned_cols=127 Identities=18% Similarity=0.206 Sum_probs=85.9
Q ss_pred CCceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCeee-EEEEEEcCCeEEEEEeccCC-CH
Q 008898 256 PKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIVR-IIGYCHSKEMYAIVYNLLNG-SL 333 (549)
Q Consensus 256 ~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv~-l~~~~~~~~~~~lv~e~~~g-sL 333 (549)
..+.||+|.+|.||+|.+. |..+|+|+-+.+ .....+..|.++|..++.-++.+ +|.|-.+ ++.|||+.| .|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d-s~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRD-SPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCC-cchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcch
Confidence 3456999999999999885 447888876543 34567889999999998766654 4444322 344999977 67
Q ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCC-CCCEEEecCCCceEEeeeccccc
Q 008898 334 KQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVK-SSNILLSENFHHPQLSDFGAAMV 396 (549)
Q Consensus 334 ~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlk-p~NILl~~~~~~~kL~DFGla~~ 396 (549)
.+.-...+ .+-...++++-.-|-.. ||-|..|. |...+|..+ +.+.|+||..|..
T Consensus 100 ~~~~~~~~----rk~l~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~-~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIGGD----RKHLLRVLEKAYKLDRL---GIEHGELSRPWKNVLVND-RDVYIIDFDSATF 155 (201)
T ss_pred hhhhhccc----HHHHHHHHHHHHHHHHh---ccchhhhcCCceeEEecC-CcEEEEEccchhh
Confidence 66543222 22234455554455566 89999987 544444444 3799999998853
No 474
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.81 E-value=8.1e-05 Score=70.42 Aligned_cols=96 Identities=27% Similarity=0.425 Sum_probs=77.9
Q ss_pred HHHHHHhcCCC-CCeeeEEEEEEcCCeEEEEEeccC-CCH-------HHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCC
Q 008898 296 REVELLSSIKH-ENIVRIIGYCHSKEMYAIVYNLLN-GSL-------KQYLKQLKWNERMDVAIGVAKALEYLHHTCDPP 366 (549)
Q Consensus 296 ~E~~il~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~-gsL-------~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~ 366 (549)
.|.-+++.+.+ +++.+++|+| +.++ +.|+.+ +++ .+++ ..+|..+.++|.++++.+.+|++.....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C---G~~~-v~E~~~~~~~~~~~~~l~~~~-~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC---GRFY-VVEYVGAGSLYGIYRPLSQFL-QSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC---CCEE-EEEeecCcccccccccccccc-ccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 47888888876 6999999999 4444 556664 544 3443 5789999999999999999999976667
Q ss_pred EEEecCCCCCEEEecCCCceEEeeecccccc
Q 008898 367 IIHRDVKSSNILLSENFHHPQLSDFGAAMVH 397 (549)
Q Consensus 367 iiHrDlkp~NILl~~~~~~~kL~DFGla~~~ 397 (549)
+...|++|+|+-++++ +.+|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~~~-~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDD-GRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCC-CcEEEEechhcchh
Confidence 9999999999999988 68999999876443
No 475
>PRK11175 universal stress protein UspE; Provisional
Probab=97.74 E-value=0.00023 Score=72.46 Aligned_cols=119 Identities=9% Similarity=0.089 Sum_probs=84.2
Q ss_pred cEEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCc--cc---c------------chHHHHHHh---hhccCc
Q 008898 23 RTVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDT--LD---L------------NTFHIHEDL---CKSKKV 82 (549)
Q Consensus 23 ~~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~--~~---~------------~~~~~~~~~---c~~k~~ 82 (549)
++|||++|.+..+..+|.||+.-..+-|..|++|||..+... .. . +....++.+ ++..++
T Consensus 4 ~~ILv~~D~s~~~~~al~~a~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (305)
T PRK11175 4 QNILVVIDPNQDDQPALRRAVYLAQRNGGKITAFLPIYDFSYEMTTLLSPDEREAMRQGVISQRTAWIREQAKPYLDAGI 83 (305)
T ss_pred ceEEEEcCCCccccHHHHHHHHHHHhcCCCEEEEEeccCchhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 579999999999999999999976677889999999743211 00 0 001122333 345578
Q ss_pred eEEEEEEecCcchhhHHHHHhhhcccEEEEecccC----CCCchhHHHHHhhhCCCCcEEEEecc
Q 008898 83 DFLVKVCIGDSYITELSNQVRISYATILALGCSLS----GLKDSEVLTRCLRALPPACTILVMDN 143 (549)
Q Consensus 83 ~~~~~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~----~~~~~~v~~~c~~~~~~~c~v~~v~~ 143 (549)
.++..|.++......+++.|+...++.||+|.... +...+.+..+.+++++ |-|+.|..
T Consensus 84 ~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~~~~~~~~~gs~~~~l~~~~~--~pvlvv~~ 146 (305)
T PRK11175 84 PIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQHDKLESVIFTPTDWHLLRKCP--CPVLMVKD 146 (305)
T ss_pred ceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCCcHHHhhccChhHHHHHhcCC--CCEEEecc
Confidence 88888876335566899999999999999998754 1111127777888877 88887753
No 476
>PLN02876 acyl-CoA dehydrogenase
Probab=97.72 E-value=0.00024 Score=82.34 Aligned_cols=141 Identities=13% Similarity=0.232 Sum_probs=89.4
Q ss_pred CceEcccCceEEEEEEecCC---cEEEEEEeecCC--cCHHHHHHHHHHHhcCC-CCCe--eeEEEEEEcC---CeEEEE
Q 008898 257 KMLIGQGGNSKVYRTNHVDG---QVAAVKVLKCTN--WSEEEVLREVELLSSIK-HENI--VRIIGYCHSK---EMYAIV 325 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g---~~~AvK~l~~~~--~~~~~~~~E~~il~~l~-h~nI--v~l~~~~~~~---~~~~lv 325 (549)
...++.|.+..+|+....++ ..+++|+..... .....+.+|..+|+.+. |.++ .+++.+|.+. +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 45689999999999876543 467777765432 22356889999999995 6654 7788888664 357899
Q ss_pred EeccCCCH-HH--------------------HHH---Hhchh----------------HHHHH---------------HH
Q 008898 326 YNLLNGSL-KQ--------------------YLK---QLKWN----------------ERMDV---------------AI 350 (549)
Q Consensus 326 ~e~~~gsL-~~--------------------~l~---~~~~~----------------~~~~i---------------~~ 350 (549)
||++.|.. .+ .+. ..++. +...+ ..
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 99997642 10 110 01100 00000 01
Q ss_pred HHHHHHHHHHhCCC--------CCEEEecCCCCCEEEecCCCc-eEEeeecccccc
Q 008898 351 GVAKALEYLHHTCD--------PPIIHRDVKSSNILLSENFHH-PQLSDFGAAMVH 397 (549)
Q Consensus 351 ~i~~aL~yLH~~~~--------~~iiHrDlkp~NILl~~~~~~-~kL~DFGla~~~ 397 (549)
.+...+.+|..+.. ..+||+|+++.|||++.+.+. .-|.||+++.+-
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 23344667755422 259999999999999864233 468999988653
No 477
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.65 E-value=0.00033 Score=68.62 Aligned_cols=69 Identities=19% Similarity=0.264 Sum_probs=42.8
Q ss_pred ceEcccCce-EEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCC---CeeeEEEEEEcC---CeEEEEEeccC
Q 008898 258 MLIGQGGNS-KVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHE---NIVRIIGYCHSK---EMYAIVYNLLN 330 (549)
Q Consensus 258 ~~lG~G~fg-~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~---nIv~l~~~~~~~---~~~~lv~e~~~ 330 (549)
..|+.||.. .||+. +..+++|..+. ......+.+|.+++..+... .+..+++..... ...+++|+++.
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 457777776 58975 23567786553 33445788999999887532 234444444322 23477899986
Q ss_pred C
Q 008898 331 G 331 (549)
Q Consensus 331 g 331 (549)
|
T Consensus 78 G 78 (235)
T cd05155 78 G 78 (235)
T ss_pred C
Confidence 5
No 478
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.55 E-value=0.00061 Score=73.80 Aligned_cols=132 Identities=19% Similarity=0.228 Sum_probs=80.7
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcCH----------------------------H----------HHHHHHH
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSE----------------------------E----------EVLREVE 299 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~----------------------------~----------~~~~E~~ 299 (549)
+.||.-+.|.||+++..+|+.||||+-++.-... + +|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 4689999999999999999999999975431100 0 1223332
Q ss_pred ----HHhcCCCCC------eeeEEEEEEcCCeEEEEEeccCC----CHHHHHHH--hchhHHHHHHHHHHHHHHHHHhCC
Q 008898 300 ----LLSSIKHEN------IVRIIGYCHSKEMYAIVYNLLNG----SLKQYLKQ--LKWNERMDVAIGVAKALEYLHHTC 363 (549)
Q Consensus 300 ----il~~l~h~n------Iv~l~~~~~~~~~~~lv~e~~~g----sL~~~l~~--~~~~~~~~i~~~i~~aL~yLH~~~ 363 (549)
+.+.+.|-+ |.++|- .-.....|+|||++| +| +++.. .+... ++..+.++ |++..-
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl-~~i~~~gi~~~~---i~~~l~~~--~~~qIf 318 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDL-DAIDKRGISPHD---ILNKLVEA--YLEQIF 318 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCH-HHHHHcCCCHHH---HHHHHHHH--HHHHHH
Confidence 223334544 333332 223467899999976 34 33433 33333 33333332 222222
Q ss_pred CCCEEEecCCCCCEEEecC---CCceEEeeecccccc
Q 008898 364 DPPIIHRDVKSSNILLSEN---FHHPQLSDFGAAMVH 397 (549)
Q Consensus 364 ~~~iiHrDlkp~NILl~~~---~~~~kL~DFGla~~~ 397 (549)
..|++|+|=.|.||++..+ ...+.+-|||+....
T Consensus 319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 2299999999999999942 357899999997543
No 479
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.53 E-value=0.00095 Score=63.31 Aligned_cols=124 Identities=23% Similarity=0.391 Sum_probs=87.1
Q ss_pred cCCCCCceEcccCc-eEEEEEEecCCcEEEEEEeec---CC-------cC------------HHHHHHHHHHHhcCC---
Q 008898 252 HNFSPKMLIGQGGN-SKVYRTNHVDGQVAAVKVLKC---TN-------WS------------EEEVLREVELLSSIK--- 305 (549)
Q Consensus 252 ~~f~~~~~lG~G~f-g~Vy~~~~~~g~~~AvK~l~~---~~-------~~------------~~~~~~E~~il~~l~--- 305 (549)
.+++..+.||.|.- |.||+++. +|+.||+|+++. .. .. ...|..|-....+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 57888899999999 99999987 678999999432 00 00 023667777766664
Q ss_pred CCCe--eeEEEEEEcC------------------CeEEEEEeccCCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCC
Q 008898 306 HENI--VRIIGYCHSK------------------EMYAIVYNLLNGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDP 365 (549)
Q Consensus 306 h~nI--v~l~~~~~~~------------------~~~~lv~e~~~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~ 365 (549)
+.++ ++.+||..-. ..+.||.||....- .....-+.+|.+-|..+|..
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~~~~~~~~dl~~~~k~--- 183 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIRDIPQMLRDLKILHKL--- 183 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchhHHHHHHHHHHHHHHC---
Confidence 5566 8888887211 24677888774322 11122345677778889998
Q ss_pred CEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 366 PIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 366 ~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
||+-+|+++.|.. .-+|+|||.+
T Consensus 184 gI~~~Dv~~~ny~------~G~lvDfs~~ 206 (207)
T PF13095_consen 184 GIVPRDVKPRNYR------GGKLVDFSSS 206 (207)
T ss_pred CeeeccCcccccc------CCEEEecccC
Confidence 9999999999986 2499999964
No 480
>PRK05231 homoserine kinase; Provisional
Probab=97.52 E-value=0.0026 Score=65.25 Aligned_cols=134 Identities=16% Similarity=0.247 Sum_probs=74.6
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCC--eeeEEE------EEEcCCeEEEEEecc
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHEN--IVRIIG------YCHSKEMYAIVYNLL 329 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~n--Iv~l~~------~~~~~~~~~lv~e~~ 329 (549)
+.|+.|....+|+....+| .+++|+.. ....+.+..|..++..|.... +.+.+. +...++..+++++++
T Consensus 28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l 104 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL 104 (319)
T ss_pred chhccccccceEEEEeCCC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence 3466777788999876555 68889875 223455556666666653211 233332 122345678899998
Q ss_pred CCC-H-----------HHHHHH-------hc----------h-hHHHH------------HH-HHHHHHHHHHHhC----
Q 008898 330 NGS-L-----------KQYLKQ-------LK----------W-NERMD------------VA-IGVAKALEYLHHT---- 362 (549)
Q Consensus 330 ~gs-L-----------~~~l~~-------~~----------~-~~~~~------------i~-~~i~~aL~yLH~~---- 362 (549)
.|. + -+.+-+ +. | ..... .. ..+...+..+...
T Consensus 105 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 184 (319)
T PRK05231 105 EGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPA 184 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccccc
Confidence 663 1 111110 10 1 11110 01 1111222333211
Q ss_pred CCCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 363 CDPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 363 ~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
...++||+|+.|.||+++.+ ...-|+||+.+.
T Consensus 185 lp~~liHgD~~~~Nil~~~~-~~~~iIDf~~~~ 216 (319)
T PRK05231 185 LPRGVIHADLFRDNVLFEGD-RLSGFIDFYFAC 216 (319)
T ss_pred CCcccCCCCCCCCcEEEECC-ceEEEEeccccc
Confidence 24589999999999999976 344799999873
No 481
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.46 E-value=0.0013 Score=64.25 Aligned_cols=70 Identities=11% Similarity=0.202 Sum_probs=45.4
Q ss_pred ceEcccCceEEEEEEecC--CcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCC-eeeEEEEEEcCCeEEEEEeccCC
Q 008898 258 MLIGQGGNSKVYRTNHVD--GQVAAVKVLKCTNWSEEEVLREVELLSSIKHEN-IVRIIGYCHSKEMYAIVYNLLNG 331 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~--g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~~lv~e~~~g 331 (549)
+.|..|-...+|+....+ ++.+++|+........-+..+|+.+++.+.... ..++++.+. + .++|||+.|
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~G 76 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIPG 76 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeCC
Confidence 457778888999987654 678889977543322223457888888885333 344554443 2 378999865
No 482
>PRK10593 hypothetical protein; Provisional
Probab=97.42 E-value=0.0018 Score=65.86 Aligned_cols=73 Identities=11% Similarity=0.066 Sum_probs=53.9
Q ss_pred CceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCC---CCeeeEEEEEEc---CCeEEEEEeccC
Q 008898 257 KMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKH---ENIVRIIGYCHS---KEMYAIVYNLLN 330 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h---~nIv~l~~~~~~---~~~~~lv~e~~~ 330 (549)
.+.||.|..+.||+....++ .+.+|..+. ......+..|...|+.|.. -.+.+++++|.. .+..++|||++.
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~ 96 (297)
T PRK10593 19 VECISEQPYAALWALYDSQG-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR 96 (297)
T ss_pred eeecCCccceeEEEEEcCCC-CEEEEEecc-cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence 44699999999999876555 466777543 2234678899999998853 367788888754 356899999986
Q ss_pred C
Q 008898 331 G 331 (549)
Q Consensus 331 g 331 (549)
|
T Consensus 97 G 97 (297)
T PRK10593 97 G 97 (297)
T ss_pred C
Confidence 5
No 483
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.39 E-value=0.00062 Score=68.99 Aligned_cols=135 Identities=19% Similarity=0.204 Sum_probs=81.3
Q ss_pred CceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCC--eeeEEE------EEEcCCeEEEEEec
Q 008898 257 KMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHEN--IVRIIG------YCHSKEMYAIVYNL 328 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~n--Iv~l~~------~~~~~~~~~lv~e~ 328 (549)
.+.|..|....+|+.... +..+++|+... .....+..|+.++..+.+.. +.+++. +...++..++++++
T Consensus 19 i~~i~~G~~n~~y~v~~~-~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTTD-SGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEeC-CCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 345777877899998654 44688898764 34466778888888775322 444443 12334567889999
Q ss_pred cCCC-HH-----------HHHHH-------h----------chhHHH----------HHHHHHHHHHHHHHh----CCCC
Q 008898 329 LNGS-LK-----------QYLKQ-------L----------KWNERM----------DVAIGVAKALEYLHH----TCDP 365 (549)
Q Consensus 329 ~~gs-L~-----------~~l~~-------~----------~~~~~~----------~i~~~i~~aL~yLH~----~~~~ 365 (549)
+.|. +. +.+.+ + .|.... .....+..++.++.+ ....
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 8662 11 11100 0 111100 011123344555553 1234
Q ss_pred CEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 366 PIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 366 ~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
+++|+|+.|.||+++++ +.+-|.||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~~~-~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFDGD-ELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEeCC-ceEEEeehhhhc
Confidence 79999999999999987 456799999873
No 484
>PRK11175 universal stress protein UspE; Provisional
Probab=97.25 E-value=0.0024 Score=64.91 Aligned_cols=119 Identities=11% Similarity=0.081 Sum_probs=83.5
Q ss_pred CCcEEEEEEecChhh-------HHHHHHHHHHhcCC-CCeEEEEEeeccCCcc--------ccc---------hHHHHHH
Q 008898 21 KKRTVIFGLKSDHYS-------REILLQLLTVIAKP-GDNVLAVHVEEQNDTL--------DLN---------TFHIHED 75 (549)
Q Consensus 21 ~~~~~~v~~~~~~~~-------~~~l~wa~~~~~~~-~d~v~~~hv~~~~~~~--------~~~---------~~~~~~~ 75 (549)
..++|||++|.+.++ ..+|.+|+.-...- +-.|.+|||....... ... ....++.
T Consensus 151 ~~~~Ilva~D~s~~~~~~~~~~~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (305)
T PRK11175 151 EGGKILVAVNVASEEPYHDALNEKLVEEAIDLAEQLNHAEVHLVNAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKA 230 (305)
T ss_pred CCCeEEEEeCCCCCccchhHHHHHHHHHHHHHHhhCcCCceEEEEEecCcchhccccccccchhhHHHHHHHHHHHHHHH
Confidence 457999999998753 67999999776665 7889999997432110 000 1134556
Q ss_pred hhhccCceE-EEEEEecCcchhhHHHHHhhhcccEEEEecccCC----CCchhHHHHHhhhCCCCcEEEEec
Q 008898 76 LCKSKKVDF-LVKVCIGDSYITELSNQVRISYATILALGCSLSG----LKDSEVLTRCLRALPPACTILVMD 142 (549)
Q Consensus 76 ~c~~k~~~~-~~~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~~----~~~~~v~~~c~~~~~~~c~v~~v~ 142 (549)
+.+..+++. ...+..|. ....|.+.|+...|+.||+|...++ .-.+.++++.+++++ |-|+.|.
T Consensus 231 ~~~~~~~~~~~~~v~~G~-~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~llGS~a~~v~~~~~--~pVLvv~ 299 (305)
T PRK11175 231 LRQKFGIDEEQTHVEEGL-PEEVIPDLAEHLDAELVILGTVGRTGLSAAFLGNTAEHVIDHLN--CDLLAIK 299 (305)
T ss_pred HHHHhCCChhheeeccCC-HHHHHHHHHHHhCCCEEEECCCccCCCcceeecchHHHHHhcCC--CCEEEEc
Confidence 666666654 34456675 4668999999999999999997551 111238999999998 9998884
No 485
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.21 E-value=0.0075 Score=63.61 Aligned_cols=72 Identities=21% Similarity=0.239 Sum_probs=51.4
Q ss_pred ceEcccCceEEEEEEecCC-cEEEEEEeec------C--CcCHHHHHHHHHHHhcCC---CCCeeeEEEEEEcCCeEEEE
Q 008898 258 MLIGQGGNSKVYRTNHVDG-QVAAVKVLKC------T--NWSEEEVLREVELLSSIK---HENIVRIIGYCHSKEMYAIV 325 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g-~~~AvK~l~~------~--~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lv 325 (549)
+.||.|.+..||++...+| +.++||.-.. . ....+....|.+.|+.+. ..++.+++.+.. +..+++
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEEE
Confidence 4689999999999988776 5899998531 1 123456677888888763 345777777743 557889
Q ss_pred EeccCC
Q 008898 326 YNLLNG 331 (549)
Q Consensus 326 ~e~~~g 331 (549)
||++.+
T Consensus 110 ME~L~~ 115 (401)
T PRK09550 110 MEDLSD 115 (401)
T ss_pred EecCCC
Confidence 999843
No 486
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.19 E-value=0.0015 Score=64.74 Aligned_cols=129 Identities=15% Similarity=0.155 Sum_probs=73.0
Q ss_pred EcccCceEEEEEEecCCcEEEEEEeecCCcCH-HHHHHHHHHHhcCCCCCe-eeEEEEEEcCCeEEEEEeccCCC-HHH-
Q 008898 260 IGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSE-EEVLREVELLSSIKHENI-VRIIGYCHSKEMYAIVYNLLNGS-LKQ- 335 (549)
Q Consensus 260 lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~-~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lv~e~~~gs-L~~- 335 (549)
+..|-.+.+|+.. .+++.+++|+........ -+..+|..+++.+....+ .+++..+. -+++|+|+.|. +..
T Consensus 4 ~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~ 78 (256)
T TIGR02721 4 LSGGLTNRSWRIE-HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLD 78 (256)
T ss_pred CCCcCcCCeEEEE-eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccccc
Confidence 4567778899887 457788888765432221 235678999988864333 33444432 25789998662 221
Q ss_pred -------------HHHH---h-------chhHH-HHHHHH---------HHHHHHHHHhC-----CCCCEEEecCCCCCE
Q 008898 336 -------------YLKQ---L-------KWNER-MDVAIG---------VAKALEYLHHT-----CDPPIIHRDVKSSNI 377 (549)
Q Consensus 336 -------------~l~~---~-------~~~~~-~~i~~~---------i~~aL~yLH~~-----~~~~iiHrDlkp~NI 377 (549)
.+.+ . ..... ..+..+ +...+..+-.. ....++|+|+.|.||
T Consensus 79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni 158 (256)
T TIGR02721 79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL 158 (256)
T ss_pred cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence 1111 0 00111 011111 11112222111 123589999999999
Q ss_pred EEecCCCceEEeeecccc
Q 008898 378 LLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 378 Ll~~~~~~~kL~DFGla~ 395 (549)
+++++ + +.|+||..|.
T Consensus 159 l~~~~-~-~~lIDwE~a~ 174 (256)
T TIGR02721 159 VVTPQ-G-LKLIDWEYAS 174 (256)
T ss_pred EEeCC-C-CEEEeccccC
Confidence 99987 4 7999999873
No 487
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.13 E-value=0.01 Score=60.61 Aligned_cols=135 Identities=18% Similarity=0.204 Sum_probs=79.7
Q ss_pred CceEcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCC--eeeEEEE------EEcCCeEEEEEec
Q 008898 257 KMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHEN--IVRIIGY------CHSKEMYAIVYNL 328 (549)
Q Consensus 257 ~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~n--Iv~l~~~------~~~~~~~~lv~e~ 328 (549)
.+.++.|....+|+....+| .+++|+.... ...+++..|.+++..|.... +.+++.. ...++..++++++
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~-~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKR-VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCC-CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 34577777789999876545 5778877542 23456667788887774222 3444331 1224567889999
Q ss_pred cCCC------HHH------HHHH-------h-----------chhHHH------------HHHHHHHHHHHHHHh----C
Q 008898 329 LNGS------LKQ------YLKQ-------L-----------KWNERM------------DVAIGVAKALEYLHH----T 362 (549)
Q Consensus 329 ~~gs------L~~------~l~~-------~-----------~~~~~~------------~i~~~i~~aL~yLH~----~ 362 (549)
+.|. ..+ .+.+ + .|.... .....+...++++.. .
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 8652 111 1100 1 010000 011123345555543 2
Q ss_pred CCCCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 363 CDPPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 363 ~~~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
...+++|+|+.+.||+++++ +...|+||+.+
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~-~~~~vIDfd~~ 215 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGD-SVKGVIDFYFA 215 (307)
T ss_pred CCCccCCCCCCcCcEEEECC-ceEEEeecccc
Confidence 24589999999999999988 55689999987
No 488
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=97.12 E-value=0.0038 Score=64.74 Aligned_cols=95 Identities=9% Similarity=0.006 Sum_probs=70.6
Q ss_pred CcEEEEEEecChhhHHHHHHHHHHhcCC--CCeEEEEEeeccCCcccc---------chHHHHHHhhhc------cCceE
Q 008898 22 KRTVIFGLKSDHYSREILLQLLTVIAKP--GDNVLAVHVEEQNDTLDL---------NTFHIHEDLCKS------KKVDF 84 (549)
Q Consensus 22 ~~~~~v~~~~~~~~~~~l~wa~~~~~~~--~d~v~~~hv~~~~~~~~~---------~~~~~~~~~c~~------k~~~~ 84 (549)
-++|||.+|.|..|+.++.+|+.-.-.. |..|.+|||......... +.+...+..... .++.+
T Consensus 5 ykkILVavDGSe~S~~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~~~~~~~~~~eelle~~~~~~~~~l~~~~~gV~v 84 (357)
T PRK12652 5 ANRLLVPVADSVTVRQTVAYAVESAEEAAETPTVHLVAAASGRAVDPEGQDELAAAEELLERVEVWATEDLGDDASSVTI 84 (357)
T ss_pred cCeEEEEeCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEEecCcccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCce
Confidence 4689999999999999999999977664 589999999854221110 111222333322 47888
Q ss_pred EEEEEe--------cCcchhhHHHHHhhhcccEEEEecccC
Q 008898 85 LVKVCI--------GDSYITELSNQVRISYATILALGCSLS 117 (549)
Q Consensus 85 ~~~v~~--------g~~~~~~l~~e~k~~~~~~lvlg~~~~ 117 (549)
+..+.. | +...++++.|+..+++.||+|-..+
T Consensus 85 e~~vv~~~~~~~~~G-~pae~Iv~~Aee~~aDLIVm~~~~~ 124 (357)
T PRK12652 85 ETALLGTDEYLFGPG-DYAEVLIAYAEEHGIDRVVLDPEYN 124 (357)
T ss_pred EEEEEeccccccCCC-CHHHHHHHHHHHcCCCEEEECCCCC
Confidence 888876 5 4567899999999999999999877
No 489
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.08 E-value=0.0018 Score=74.60 Aligned_cols=190 Identities=20% Similarity=0.231 Sum_probs=120.3
Q ss_pred HHHHHHHHhcCCCCCeeeEEEEEEcCCeEEEEE----eccC-CCHHHHHH---HhchhHHHHHHHHHHHHHHHHHhCCCC
Q 008898 294 VLREVELLSSIKHENIVRIIGYCHSKEMYAIVY----NLLN-GSLKQYLK---QLKWNERMDVAIGVAKALEYLHHTCDP 365 (549)
Q Consensus 294 ~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~----e~~~-gsL~~~l~---~~~~~~~~~i~~~i~~aL~yLH~~~~~ 365 (549)
...|++.+..+.|+|+..++.|..+....-+++ +++. -++...++ ..+....+.+..++.+||.|+|+.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~--- 305 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL--- 305 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh---
Confidence 345677788889999999998886554333333 3442 24544443 366677778889999999999998
Q ss_pred CEEEecCCCC---CEEEecCCCceEEe--eeccccccccccccccCccccccccCCccccccccccCCCCc--hhhHHHH
Q 008898 366 PIIHRDVKSS---NILLSENFHHPQLS--DFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDE--KIDVYSY 438 (549)
Q Consensus 366 ~iiHrDlkp~---NILl~~~~~~~kL~--DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~--k~DvwSl 438 (549)
...|.-+..+ +--.+.+ +...++ ||+.......... .....-+..|.|||......++. ..|+|.+
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e-~~~~~sl~~~~ss~~l~d~~~------~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGE-GVVAISLSDFDSSKPLPDNEK------SFSDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred ccceeEEecccccccccCcc-ceeecchhhhcccccCCCccc------chhhcCccccccccccccccchhhhhhHHHHH
Confidence 5555544444 3333334 344555 7776644333221 11223455678888777666554 4799999
Q ss_pred HHHHHHHHcCCCCCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 439 GVVLLELITGKEAIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 439 Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
|..+..+..|..+-....... .+++.. ....+.++...|+..++++|++..+++.
T Consensus 379 gll~~~~~~~~~i~~~~~~~~-----------------~~l~~~--------~~~~~~d~~~~~~~~~~~~Rl~~~~ll~ 433 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKSAVPV-----------------SLLDVL--------STSELLDALPKCLDEDSEERLSALELLT 433 (1351)
T ss_pred HHHHhhhhhcCcccccccchh-----------------hhhccc--------cchhhhhhhhhhcchhhhhccchhhhhh
Confidence 999999998866543221110 111111 1113556678899999999999999998
No 490
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]
Probab=96.99 E-value=0.014 Score=52.19 Aligned_cols=119 Identities=16% Similarity=0.255 Sum_probs=90.2
Q ss_pred CcEEEEEEe-cChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCcccc----------------------chHHHHHHhhh
Q 008898 22 KRTVIFGLK-SDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDTLDL----------------------NTFHIHEDLCK 78 (549)
Q Consensus 22 ~~~~~v~~~-~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~~~~----------------------~~~~~~~~~c~ 78 (549)
.++|++++| .+..++.++.+|+......+..+.++||......... ......+..-.
T Consensus 5 ~~~il~~~d~~s~~~~~a~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
T COG0589 5 YKKILVAVDVGSEAAEKALEEAVALAKRLGAPLILLVVIDPLEPTALVSVALADAPIPLSEEELEEEAEELLAEAKALAE 84 (154)
T ss_pred cceEEEEeCCCCHHHHHHHHHHHHHHHhcCCeEEEEEEecccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 469999999 8889999999999999999999999999855442111 11133344444
Q ss_pred ccCce-EEEEEEecCcchhhHHHHHhhhcccEEEEecccC----CCCchhHHHHHhhhCCCCcEEEEec
Q 008898 79 SKKVD-FLVKVCIGDSYITELSNQVRISYATILALGCSLS----GLKDSEVLTRCLRALPPACTILVMD 142 (549)
Q Consensus 79 ~k~~~-~~~~v~~g~~~~~~l~~e~k~~~~~~lvlg~~~~----~~~~~~v~~~c~~~~~~~c~v~~v~ 142 (549)
..++. .+..+..|.+....+.+.|....|+.||+|.... +.-.+.+.++.+++++ |.|+.+.
T Consensus 85 ~~~~~~~~~~~~~g~~~~~~i~~~a~~~~adliV~G~~g~~~l~~~llGsvs~~v~~~~~--~pVlvv~ 151 (154)
T COG0589 85 AAGVPVVETEVVEGSPSAEEILELAEEEDADLIVVGSRGRSGLSRLLLGSVAEKVLRHAP--CPVLVVR 151 (154)
T ss_pred HcCCCeeEEEEecCCCcHHHHHHHHHHhCCCEEEECCCCCccccceeeehhHHHHHhcCC--CCEEEEc
Confidence 45666 4788899999888899999999999999999755 2112348899988888 8777664
No 491
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.75 E-value=0.0014 Score=65.82 Aligned_cols=143 Identities=18% Similarity=0.238 Sum_probs=95.9
Q ss_pred ccCHHHHHhhhcC---CCCCceEcccCceEEEEEEecCCcEEEEEEeecCCcC-----------------------HHHH
Q 008898 241 RFTSQELCHLTHN---FSPKMLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS-----------------------EEEV 294 (549)
Q Consensus 241 ~~~~~el~~~~~~---f~~~~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~-----------------------~~~~ 294 (549)
-+++-.|..+.++ ++.++.||-|--+.+|.+-..+|+..++|.-.....+ .-..
T Consensus 78 GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa 157 (465)
T KOG2268|consen 78 GYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAA 157 (465)
T ss_pred cchHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHH
Confidence 3455556555554 5678889999999999999888999999864321111 0124
Q ss_pred HHHHHHHhcCC-CCC-eeeEEEEEEcCCeEEEEEeccCC-CHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEec
Q 008898 295 LREVELLSSIK-HEN-IVRIIGYCHSKEMYAIVYNLLNG-SLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHRD 371 (549)
Q Consensus 295 ~~E~~il~~l~-h~n-Iv~l~~~~~~~~~~~lv~e~~~g-sL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrD 371 (549)
.+|...|+.|. |.+ +.+.+++ +..++||+++.| .|.+.-.-. ....+...+...+.-|-.. |+||+|
T Consensus 158 ~kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v~---d~~~ly~~lm~~Iv~la~~---GlIHgD 227 (465)
T KOG2268|consen 158 TKEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRHVE---DPPTLYDDLMGLIVRLANH---GLIHGD 227 (465)
T ss_pred HHHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeeecC---ChHHHHHHHHHHHHHHHHc---Cceecc
Confidence 57888888885 322 3333333 567889999865 454332222 2223344455555566666 999999
Q ss_pred CCCCCEEEecCCCceEEeeeccc
Q 008898 372 VKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 372 lkp~NILl~~~~~~~kL~DFGla 394 (549)
..-=||+++++ +.++++||--+
T Consensus 228 FNEFNimv~dd-~~i~vIDFPQm 249 (465)
T KOG2268|consen 228 FNEFNIMVKDD-DKIVVIDFPQM 249 (465)
T ss_pred cchheeEEecC-CCEEEeechHh
Confidence 99999999988 57999999754
No 492
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.73 E-value=0.0077 Score=61.21 Aligned_cols=69 Identities=14% Similarity=0.204 Sum_probs=44.7
Q ss_pred eEcccCceEEEEEEecC-------CcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCe-eeEEEEEEcCCeEEEEEeccC
Q 008898 259 LIGQGGNSKVYRTNHVD-------GQVAAVKVLKCTNWSEEEVLREVELLSSIKHENI-VRIIGYCHSKEMYAIVYNLLN 330 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~-------g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lv~e~~~ 330 (549)
.|..|-...+|+....+ ++.+++|+.........+..+|..++..+....+ .++++++.. .++++|+.
T Consensus 5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i~ 80 (302)
T cd05156 5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFIP 80 (302)
T ss_pred EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----CchhheeC
Confidence 45566667899987654 5789999976544333456788888888854333 345555532 24678775
Q ss_pred C
Q 008898 331 G 331 (549)
Q Consensus 331 g 331 (549)
|
T Consensus 81 G 81 (302)
T cd05156 81 S 81 (302)
T ss_pred C
Confidence 4
No 493
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.30 E-value=0.0092 Score=63.54 Aligned_cols=166 Identities=20% Similarity=0.205 Sum_probs=97.6
Q ss_pred HHHHHHHHHHhcCCCCCeeeEEEEEEc-CCeEEEEEeccCCCHHHHHHHhchhHHHHHHHHHHHHHHHHHhCCCCCEEEe
Q 008898 292 EEVLREVELLSSIKHENIVRIIGYCHS-KEMYAIVYNLLNGSLKQYLKQLKWNERMDVAIGVAKALEYLHHTCDPPIIHR 370 (549)
Q Consensus 292 ~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lv~e~~~gsL~~~l~~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHr 370 (549)
.++.--..+++.+.|+|...++.+... .....+|+|+++-+|++++.... ... +. ++ .+ ++.|-
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~-l~~---~s----~~----~~---~~~~~ 91 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN-LKD---ES----LL----AH---GVLHL 91 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc-cch---hh----hc----cc---cccee
Confidence 456667888999999999999988753 34688899999999999986533 111 11 11 11 44443
Q ss_pred cCCCCCEEEecCCCceEEeeeccccccccccccccCccccccccCCccccccccccCCCCchhhHHHHHHHHHHHHcCCC
Q 008898 371 DVKSSNILLSENFHHPQLSDFGAAMVHHQSHQVSENVKPVNVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKE 450 (549)
Q Consensus 371 Dlkp~NILl~~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~ 450 (549)
| ..+.+| -++.. . ....| +|+|||++|.++.|+.-|..
T Consensus 92 -----~--------~~~~td-~~~t~------~------~~~~~----------------pKsdVwsl~~i~~el~L~~~ 129 (725)
T KOG1093|consen 92 -----N--------IIYITD-HFLTK------Y------PSPIG----------------PKSDVWSLGFIILELYLGIS 129 (725)
T ss_pred -----h--------hhhccc-ccccc------C------CCCCC----------------cchhhhhHHHHHHHHHHhhH
Confidence 1 233444 11100 0 01111 49999999999999999987
Q ss_pred CCCCcccchhhHHHHHHHhhcccccccccCCcccccCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 008898 451 AIQTNKANRESLVLWARSLLSSGLCERLIDPQLNEEYNREEIEIVMCAARLCLLHSSSRRPTMKTLLK 518 (549)
Q Consensus 451 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 518 (549)
.+..... .+.++...+....+.....+.- ...+.-++.+.+.++...|+-..|..||...++.+
T Consensus 130 l~~~~~~-s~~l~~i~k~~~~d~~~~~~a~---e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k 193 (725)
T KOG1093|consen 130 LEAELTE-SEYLEILLKYYTDDQELLSTAM---EHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSK 193 (725)
T ss_pred HHHHHHH-HHHHHHHHHhccCchhHHHHHH---HHHHHHhhhHhHHHHhccCCccccccccchhHHhc
Confidence 7655432 2222222222211111111100 01222345567788889999999999997666544
No 494
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.23 E-value=0.017 Score=59.22 Aligned_cols=133 Identities=18% Similarity=0.244 Sum_probs=89.0
Q ss_pred ceEcccCceEEEEEEecCCcEEEEEEeecCCcC----------------------HH-----HHHHHHHHHhcCCCCCee
Q 008898 258 MLIGQGGNSKVYRTNHVDGQVAAVKVLKCTNWS----------------------EE-----EVLREVELLSSIKHENIV 310 (549)
Q Consensus 258 ~~lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~----------------------~~-----~~~~E~~il~~l~h~nIv 310 (549)
.+|..|--+.||.+...+|..+|||+++.+-.. +. -...|+.-|.+|+.-.|.
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP 229 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP 229 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 467788889999999999999999998643110 11 134577777777543322
Q ss_pred eEEEEEEcCCeEEEEEeccCCC--HHHHHH--HhchhHHHHHHHHHHHHHHHHHhCCCCCEEEecCCCCCEEEecCCCce
Q 008898 311 RIIGYCHSKEMYAIVYNLLNGS--LKQYLK--QLKWNERMDVAIGVAKALEYLHHTCDPPIIHRDVKSSNILLSENFHHP 386 (549)
Q Consensus 311 ~l~~~~~~~~~~~lv~e~~~gs--L~~~l~--~~~~~~~~~i~~~i~~aL~yLH~~~~~~iiHrDlkp~NILl~~~~~~~ 386 (549)
----+.. ....|||+|++++ -.-.|+ .++...+..+-.+++.-+.-|-+.| ++||.||.=-|+|+.+. .+
T Consensus 230 ~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~LyhdG--~l 303 (520)
T KOG2270|consen 230 CPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYHDG--KL 303 (520)
T ss_pred CCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEECC--EE
Confidence 1000011 2457899999643 111222 2444556666677777788777766 99999999999999875 79
Q ss_pred EEeeeccccc
Q 008898 387 QLSDFGAAMV 396 (549)
Q Consensus 387 kL~DFGla~~ 396 (549)
.++|.+-+..
T Consensus 304 yiIDVSQSVE 313 (520)
T KOG2270|consen 304 YIIDVSQSVE 313 (520)
T ss_pred EEEEcccccc
Confidence 9999987643
No 495
>PRK10490 sensor protein KdpD; Provisional
Probab=96.20 E-value=0.033 Score=65.39 Aligned_cols=112 Identities=14% Similarity=0.066 Sum_probs=84.4
Q ss_pred CCcEEEEEEecChhhHHHHHHHHHHhcCCCCeEEEEEeeccCCc--cccchHHHHHHhhhccCceEEEEEEecCcchhhH
Q 008898 21 KKRTVIFGLKSDHYSREILLQLLTVIAKPGDNVLAVHVEEQNDT--LDLNTFHIHEDLCKSKKVDFLVKVCIGDSYITEL 98 (549)
Q Consensus 21 ~~~~~~v~~~~~~~~~~~l~wa~~~~~~~~d~v~~~hv~~~~~~--~~~~~~~~~~~~c~~k~~~~~~~v~~g~~~~~~l 98 (549)
.+.+|||+|+-+.++..++.+|..-..+=|-...+|||.++... ...+.-...+++.-+++.+-++.+..|.++..+|
T Consensus 249 ~~eriLV~v~~~~~~~~lIr~~~rlA~~~~a~~~~l~V~~~~~~~~~~~~~~~l~~~~~lA~~lGa~~~~~~~~dva~~i 328 (895)
T PRK10490 249 TRDAILLCIGHNTGSEKLVRTAARLAARLGSVWHAVYVETPRLHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAV 328 (895)
T ss_pred cCCeEEEEECCCcchHHHHHHHHHHHHhcCCCEEEEEEecCCcCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence 34589999999999999999999988888889999999866432 1111112224444445556667788999999999
Q ss_pred HHHHhhhcccEEEEecccCCCC---chhHHHHHhhhCC
Q 008898 99 SNQVRISYATILALGCSLSGLK---DSEVLTRCLRALP 133 (549)
Q Consensus 99 ~~e~k~~~~~~lvlg~~~~~~~---~~~v~~~c~~~~~ 133 (549)
++-|+..+|+.||+|.+.++.+ .| ++..-.+.++
T Consensus 329 ~~~A~~~~vt~IViG~s~~~~~~~~~s-~~~~l~r~~~ 365 (895)
T PRK10490 329 LRYAREHNLGKIIIGRRASRRWWRRES-FADRLARLGP 365 (895)
T ss_pred HHHHHHhCCCEEEECCCCCCCCccCCC-HHHHHHHhCC
Confidence 9999999999999999977322 24 7777776655
No 496
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=95.89 E-value=0.05 Score=54.74 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=30.8
Q ss_pred EcccCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCC
Q 008898 260 IGQGGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIK 305 (549)
Q Consensus 260 lG~G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~ 305 (549)
.++|-...||.....+|+.+++|.-+. ......+.+|.++|+.+.
T Consensus 19 ~~~g~~~~v~~i~~~~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~ 63 (276)
T cd05152 19 NESGLDFQVVFAKDTDGVPWVLRIPRR-PDVSERAAAEKRVLALVR 63 (276)
T ss_pred cCCcceeEEEEEEcCCCCeEEEEecCC-HHHHHHHHHHHHHHHHHH
Confidence 345555667766555688898887652 223456788999998885
No 497
>PLN02236 choline kinase
Probab=95.87 E-value=0.057 Score=56.17 Aligned_cols=133 Identities=14% Similarity=0.211 Sum_probs=74.6
Q ss_pred eEcccCceEEEEEEecC-----CcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCee-eEEEEEEcCCeEEEEEeccCC-
Q 008898 259 LIGQGGNSKVYRTNHVD-----GQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIV-RIIGYCHSKEMYAIVYNLLNG- 331 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~-----g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv-~l~~~~~~~~~~~lv~e~~~g- 331 (549)
.|-.|-...+|+....+ ++.+++|+........-+...|..+++.+..-++. ++++++..+ .+++|+.|
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g~ 118 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHAR 118 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCCC
Confidence 45557788999986432 36888998765432222336788888888644443 455655332 46777754
Q ss_pred CHHH-------HH-------HH---hc---------hhHHHHHHH-----------------HHHHHHHHHHh-----CC
Q 008898 332 SLKQ-------YL-------KQ---LK---------WNERMDVAI-----------------GVAKALEYLHH-----TC 363 (549)
Q Consensus 332 sL~~-------~l-------~~---~~---------~~~~~~i~~-----------------~i~~aL~yLH~-----~~ 363 (549)
+|.. .+ .+ .+ +.+...+.. .+...+..|.. ..
T Consensus 119 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~ 198 (344)
T PLN02236 119 TLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQ 198 (344)
T ss_pred CCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCC
Confidence 2211 11 11 00 111111110 11112222221 22
Q ss_pred CCCEEEecCCCCCEEEecCCCceEEeeecccc
Q 008898 364 DPPIIHRDVKSSNILLSENFHHPQLSDFGAAM 395 (549)
Q Consensus 364 ~~~iiHrDlkp~NILl~~~~~~~kL~DFGla~ 395 (549)
...++|+|+++.|||++++.+.+.++||..|.
T Consensus 199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 33689999999999998743579999999873
No 498
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.67 E-value=0.46 Score=48.94 Aligned_cols=69 Identities=17% Similarity=0.361 Sum_probs=45.4
Q ss_pred cCceEEEEEEecCCcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCC--eee-E--EE--EEEcCCeEEEEEeccCC
Q 008898 263 GGNSKVYRTNHVDGQVAAVKVLKCTNWSEEEVLREVELLSSIKHEN--IVR-I--IG--YCHSKEMYAIVYNLLNG 331 (549)
Q Consensus 263 G~fg~Vy~~~~~~g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~n--Iv~-l--~~--~~~~~~~~~lv~e~~~g 331 (549)
+.-..||+....+|..+++|+.........++..|++.+..|.... ++. + -| +...++..+.+++++.|
T Consensus 36 s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G 111 (325)
T PRK11768 36 SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGG 111 (325)
T ss_pred cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCC
Confidence 4456799988777888999998765566777888888887764211 221 1 11 22334567778888755
No 499
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.58 E-value=0.082 Score=54.63 Aligned_cols=69 Identities=10% Similarity=0.169 Sum_probs=41.8
Q ss_pred eEcccCceEEEEEEecC----CcEEEEEEeecCCcCHHHHHHHHHHHhcCCCCCee-eEEEEEEcCCeEEEEEeccCC
Q 008898 259 LIGQGGNSKVYRTNHVD----GQVAAVKVLKCTNWSEEEVLREVELLSSIKHENIV-RIIGYCHSKEMYAIVYNLLNG 331 (549)
Q Consensus 259 ~lG~G~fg~Vy~~~~~~----g~~~AvK~l~~~~~~~~~~~~E~~il~~l~h~nIv-~l~~~~~~~~~~~lv~e~~~g 331 (549)
.|..|=...+|+....+ +..+++|+........-+-.+|..+++.+..-++. ++++++. +. ++.+|+.|
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g 94 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINA 94 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcC
Confidence 35457777899886432 24788898754322222345788888888654443 4566553 22 46777755
No 500
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.47 E-value=0.2 Score=50.83 Aligned_cols=28 Identities=32% Similarity=0.423 Sum_probs=24.8
Q ss_pred CCEEEecCCCCCEEEecCCCceEEeeeccc
Q 008898 365 PPIIHRDVKSSNILLSENFHHPQLSDFGAA 394 (549)
Q Consensus 365 ~~iiHrDlkp~NILl~~~~~~~kL~DFGla 394 (549)
.+++|+|+.+.||+++.+ .+.|+||+.+
T Consensus 187 ~~liHgD~~~~Nil~~~~--~i~lIDfd~~ 214 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKDN--EVYVIDFDYC 214 (313)
T ss_pred CceEcCCCCcccEEEeCC--cEEEEECccc
Confidence 489999999999999874 5899999976
Done!