Your job contains 1 sequence.
>008899
MIDLLEDCVSQYHIYVEKLEEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRA
VVPLRNCIFIFCTHLPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEELEKLFSHSV
DEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLF
FSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVA
SKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKS
YEKHYLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSI
GVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGF
ISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKAR
LDIGKELVEIGAESLTSTNQRGKTTLCYDKDGETYREERSTATDSEAAADPMFNSTLNRL
TLTFRKLLS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008899
(549 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 957 6.7e-100 2
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 843 8.9e-94 2
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 863 1.8e-93 2
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 868 3.8e-93 2
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 875 2.7e-92 2
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 918 3.9e-92 1
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 833 9.0e-90 2
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 809 1.4e-80 1
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 463 4.9e-46 4
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 464 8.8e-45 2
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 481 1.0e-44 1
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 476 2.2e-44 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 468 3.0e-44 2
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 464 4.2e-43 2
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 465 8.0e-43 1
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 449 1.9e-41 2
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 453 3.2e-41 1
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 442 4.6e-40 1
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 440 7.4e-40 1
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 426 3.8e-39 1
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 424 6.0e-39 2
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 425 2.3e-38 1
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 417 2.6e-37 1
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 411 2.9e-37 1
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 411 2.9e-37 1
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 405 1.1e-36 1
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 399 5.2e-35 1
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 396 1.6e-34 1
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 395 3.2e-34 1
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 393 5.8e-34 1
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 391 1.7e-33 1
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 386 3.1e-33 1
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 384 7.6e-33 1
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 381 1.8e-32 1
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 381 1.8e-32 1
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 381 1.8e-32 1
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 381 1.8e-32 1
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 381 1.8e-32 1
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 378 4.1e-32 1
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 370 4.4e-31 1
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 362 3.2e-30 1
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 362 1.0e-29 1
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 362 1.0e-29 1
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 365 1.5e-29 2
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 368 2.8e-29 3
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 352 3.5e-29 1
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 356 6.1e-28 2
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 351 1.5e-27 3
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 343 2.4e-27 2
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 335 3.1e-27 1
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 341 3.6e-27 2
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 352 3.7e-27 2
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 350 4.1e-27 2
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 329 1.5e-26 1
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 345 2.1e-26 2
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 327 2.4e-26 1
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 341 3.5e-26 2
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 196 5.5e-26 2
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 304 4.2e-24 1
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 212 1.2e-23 3
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 295 1.1e-22 1
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 295 1.1e-22 1
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 291 3.1e-22 1
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 286 4.8e-22 1
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 287 8.0e-22 1
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 188 1.0e-21 2
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 234 1.3e-21 2
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 285 1.4e-21 1
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 283 2.3e-21 1
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 282 2.9e-21 1
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 279 6.3e-21 1
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 281 1.7e-20 2
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 279 2.7e-20 2
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 279 2.7e-20 2
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 279 4.5e-20 2
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 267 7.5e-20 1
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 267 7.5e-20 1
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 265 2.1e-19 1
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 267 3.4e-19 2
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 277 6.1e-19 2
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 266 6.9e-19 1
ZFIN|ZDB-GENE-070424-144 - symbol:si:ch211-183d5.1 "si:ch... 254 9.4e-19 1
UNIPROTKB|Q8QHA5 - symbol:dna2 "DNA replication ATP-depen... 259 1.1e-18 1
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 261 2.5e-18 1
WB|WBGene00014208 - symbol:ZK1067.2 species:6239 "Caenorh... 259 3.3e-18 1
UNIPROTKB|F1RMM8 - symbol:LOC100519780 "Uncharacterized p... 252 2.3e-17 1
MGI|MGI:2138982 - symbol:Znfx1 "zinc finger, NFX1-type co... 247 5.0e-17 1
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 243 1.9e-16 1
UNIPROTKB|Q9P2E3 - symbol:ZNFX1 "NFX1-type zinc finger-co... 241 2.3e-16 1
POMBASE|SPCC1739.03 - symbol:hrr1 "Helicase Required for ... 239 4.2e-16 2
UNIPROTKB|E1BMP7 - symbol:DNA2 "DNA replication ATP-depen... 158 1.7e-15 3
RGD|1306791 - symbol:Dna2 "DNA replication helicase 2 hom... 228 1.9e-15 2
UNIPROTKB|K7DXW3 - symbol:DNA2 "DNA replication nuclease ... 158 2.1e-15 3
UNIPROTKB|H0Y455 - symbol:DNA2 "DNA replication ATP-depen... 219 2.7e-15 1
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 236 2.8e-15 2
MGI|MGI:2443732 - symbol:Dna2 "DNA replication helicase 2... 151 3.0e-15 3
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 149 3.6e-15 2
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 245 4.8e-15 2
ZFIN|ZDB-GENE-030131-9089 - symbol:mov10b.1 "Moloney leuk... 225 5.5e-15 1
RGD|1589127 - symbol:LOC684558 "similar to regulator of n... 214 1.2e-14 1
WARNING: Descriptions of 71 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 957 (341.9 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 195/340 (57%), Positives = 244/340 (71%)
Query: 140 RRSECLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLN 199
R +CL +L ++ S+ LP SK L+ C A L F TASSS +LH P+
Sbjct: 500 RTQDCLEMLTSISMSI---KLPDFISKFELQKLCLDNAYLLFCTASSSARLHMSS--PIQ 554
Query: 200 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTS 259
LVIDEAAQLKE ES IPLQL G+ HA+LIGDE QLPAM+ S I+ EA GRSLFERL
Sbjct: 555 LLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFERLVL 614
Query: 260 LNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI 319
L H+K LLN+QYRMHPSIS+FPN +FY +ILD +V+ +SYEK +LP GPYSFINI
Sbjct: 615 LGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINI 674
Query: 320 IGGSEEFIY-HSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIG 378
G E+F +S +N+VEVSVV +I+ KLY + + +S+GV+SPY AQ AI+++IG
Sbjct: 675 AYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERIG 734
Query: 379 SEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCL 438
+Y + FTV V+S+DGFQGGEEDIIIISTVR N G+IGF+S QR NVALTRAR+CL
Sbjct: 735 EKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCL 794
Query: 439 WILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAK 478
WILGNE TL ++ S+W LV DAKAR CF NA+ED ++A+
Sbjct: 795 WILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQ 834
Score = 54 (24.1 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 49 FLKYVKERFKRAVVPLRNCIFIFCTHLPKSYIS 81
F +V+ER R L + C HLP S +S
Sbjct: 424 FKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLS 456
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 843 (301.8 bits), Expect = 8.9e-94, Sum P(2) = 8.9e-94
Identities = 177/362 (48%), Positives = 237/362 (65%)
Query: 144 CLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVI 203
CL +LR L + ++ + FC + A + F TAS + ++ + ++ LV+
Sbjct: 334 CLQILRLLPERFEVSDMLENNDT---KTFCLQNADIIFCTASGAADMNPIRTGSVDLLVV 390
Query: 204 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHS 263
DEAAQLKE ES LQL+G+ HAVLIGDE QLPAMV +EA FGRSLFERL L H+
Sbjct: 391 DEAAQLKECESVAALQLSGLRHAVLIGDELQLPAMV----HNEAKFGRSLFERLVLLGHN 446
Query: 264 KHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGS 323
KHLLNVQYRMHPSIS FPN +FY +I D ANV+ Y+K +L G G +SFIN+ G
Sbjct: 447 KHLLNVQYRMHPSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGE 506
Query: 324 EEF-IYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYE 382
EEF HS +NMVEV+V+ +I+ L+K + K+S+GVVSPY Q AI+++ ++Y
Sbjct: 507 EEFGDGHSPKNMVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYS 566
Query: 383 NKDG-FTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWIL 441
+ G FT+ V+S+DGFQGGEEDIIIISTVR N G +GF++ QR NVALTRARHCLW++
Sbjct: 567 SLSGLFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVI 626
Query: 442 GNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIGKELVEIGAESLTSTNQR 501
GNE TL S S W L+ +++ CF++A +++N+ A + E V SL+ N
Sbjct: 627 GNETTLALSGSSWAKLISESRTLGCFYDAADEKNLRDAMNEALLEDVSTSFGSLSIRNGY 686
Query: 502 GK 503
GK
Sbjct: 687 GK 688
Score = 110 (43.8 bits), Expect = 8.9e-94, Sum P(2) = 8.9e-94
Identities = 43/154 (27%), Positives = 70/154 (45%)
Query: 1 MIDLLEDCVSQYHIYVEKLEEREDCNVNQSEEKECRKETEGSKGECKPFL---KYVKERF 57
+ID LE+ ++Y YV L+E E SEE E +K+ K + L ++VK+ F
Sbjct: 208 LIDFLENTEAKYEHYVHLLKEVE----RMSEEAEKKKKGADKKPKAIKILTFGEFVKKTF 263
Query: 58 KRAVVPLRNCIFIFCTHLPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEELEK-LF 116
L + THLPKS+I+ + + MV + L L K+N ++ +K
Sbjct: 264 DGFSEELEKGMVDLWTHLPKSFITSENVKSMVTARKALQRVRYFL-KENFSRDDFKKGSL 322
Query: 117 SHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRN 150
G+S+ + +L+L R E +L N
Sbjct: 323 KFDCFNGVSAYCL---QILRLLPERFEVSDMLEN 353
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 863 (308.9 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 179/364 (49%), Positives = 236/364 (64%)
Query: 143 ECLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLV 202
+CL LR L + +P + FC + A + TAS + +++ + LV
Sbjct: 312 DCLKALRLLPKRFE---IPDMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLV 368
Query: 203 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNH 262
+DEAAQLKE ES LQL G+ HA+LIGDE QLPAMV +++ ++A FGRSLFERL L H
Sbjct: 369 VDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGH 428
Query: 263 SKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGG 322
+KHLL+VQYRMHPSIS FPN +FY +I D NVK Y+K +L G +SFIN+ G
Sbjct: 429 NKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRG 488
Query: 323 SEEF-IYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEY 381
EEF HS +NMVEV+V+ +I+ LYK + KVS+GVVSPY Q AI++KIG +Y
Sbjct: 489 KEEFGDGHSPKNMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKY 548
Query: 382 ENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLW 439
+ G FT+ V+S+DGFQGGEEDIIIISTVR N G +GF++ QR NVALTRARHCLW
Sbjct: 549 SSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLW 608
Query: 440 ILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIGKELVEIGAESLTSTN 499
++GNE TL S SIW L+ +++ R CF +A ++ N+ A + E V SL+ N
Sbjct: 609 VIGNETTLALSGSIWATLISESRTRGCFHDATDEMNLRDAMNEALLEDVSSSLGSLSLRN 668
Query: 500 QRGK 503
G+
Sbjct: 669 GHGR 672
Score = 87 (35.7 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 1 MIDLLEDCVSQYHIYVEKLEEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRA 60
+I LE+ +Y +V +LEE E N EE E R+E + F ++V++ F
Sbjct: 194 LIQFLENPEGKYERHVYELEEVERMN----EEDE-REEVVVN---IPTFGEFVQKNFNSL 245
Query: 61 VVPLRNCIFIFCTHLPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEELEK 114
++ CI THLPK Y+ + M+A + L L ++N + E+
Sbjct: 246 SEEVKTCIVDLYTHLPKVYLPYEDVKKMIASRQTLQRIRYFL-RENSSRVDFEE 298
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 868 (310.6 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 179/364 (49%), Positives = 238/364 (65%)
Query: 143 ECLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLV 202
+CL LR L + +P + FC + A + TAS + +++ + LV
Sbjct: 475 DCLKALRLLPKRFE---IPDMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLV 531
Query: 203 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNH 262
+DEAAQLKE ES LQL G+ HA+LIGDE QLPAMV +++ ++A FGRSLFERL L H
Sbjct: 532 VDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGH 591
Query: 263 SKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGG 322
+KHLL+VQYRMHPSIS FPN +FY +I D NVK Y+K +L G G +SFIN+ G
Sbjct: 592 NKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRG 651
Query: 323 SEEF-IYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEY 381
EEF HS +NMVEV+VV +I+ L+K + KVS+GVVSPY Q AI++KIG +Y
Sbjct: 652 KEEFGDGHSPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKY 711
Query: 382 ENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLW 439
+ G F + V+S+DGFQGGEEDIIIISTVR N+ G +GF++ QR NVALTRARHCLW
Sbjct: 712 SSLSGQQFALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLW 771
Query: 440 ILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIGKELVEIGAESLTSTN 499
++GNE TL S SIW L+ +++ R CF++A ++ N+ A + E V SL+ N
Sbjct: 772 VIGNETTLALSGSIWATLISESRTRGCFYDATDEMNLRNAMNEALLEDVSSSLGSLSIRN 831
Query: 500 QRGK 503
G+
Sbjct: 832 GHGR 835
Score = 79 (32.9 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 15 YVEKLEEREDCNVNQSEEKECRKETEGSKGECK---PFL-KYVKERFKRAVVPLRNCIFI 70
++E E + + +V + EE E R E E + E P + ++VK+ F + CI
Sbjct: 360 FLENPEGKYERHVYELEEVE-RMEEEAERQEVVVNIPTIGEFVKKNFNSLSEEVETCIVD 418
Query: 71 FCTHLPKSYISENSFQDMVA 90
THLPK Y+ + + M+A
Sbjct: 419 LFTHLPKVYLPYDDVKIMIA 438
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 875 (313.1 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 176/337 (52%), Positives = 230/337 (68%)
Query: 169 LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 228
+ FC + A + F TASS ++ I ++ LV+DE AQLKE ES LQL G+ HA+L
Sbjct: 531 IRKFCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALL 590
Query: 229 IGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRN 288
IGDE QLPAMV ++ D+A FGRSLFERL + HSKHLLNVQYRMHPSIS FPN +FY
Sbjct: 591 IGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGG 650
Query: 289 QILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEF-IYHSCRNMVEVSVVIKILQKL 347
+I D ANV+ YEK +L G G +SFIN+ G EEF HS +NMVEV+V+ KI+ L
Sbjct: 651 RITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNL 710
Query: 348 YKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDG---FTVKVKSIDGFQGGEEDI 404
+K KQK+S+GV+SPY Q AI++++G +Y + FT+ V+S+DGFQGGE D+
Sbjct: 711 FKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDV 770
Query: 405 IIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKAR 464
IIISTVRCN G++GF+S QR NVALTRARHCLW++GN TL S SIW L+ +++ R
Sbjct: 771 IIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRTR 830
Query: 465 QCFFNADEDRNVAKARLDIGKELVEIGAESLTSTNQR 501
CF++A +D+N+ A D + V SL+ N R
Sbjct: 831 GCFYDAVDDKNLRDAMSDALLDDVSSSFGSLSIRNGR 867
Score = 64 (27.6 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 15 YVEKLEEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRAVVPLRNCIFIFCTH 74
++E E + + +VN E E + TE K + + V+ER + V + + TH
Sbjct: 408 FLENTETKYEQHVN---ELELERMTEDEKKK-----EEVEERTMQEV-DMAD----LSTH 454
Query: 75 LPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEELEK 114
LPKS+IS ++++A LH L ++N ++ +K
Sbjct: 455 LPKSFISSKDVKNLIAACQALHRVRYFL-QENSSRDDFKK 493
Score = 53 (23.7 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 1 MIDLLEDCVSQYHIYVEKLE-EREDCNVNQSEEKECRKETEGSKGECKPFL--KYVKERF 57
+ID LE+ ++Y +V +LE ER + + EE E R E + L ++ +
Sbjct: 405 IIDFLENTETKYEQHVNELELERMTEDEKKKEEVEERTMQEVDMADLSTHLPKSFISSKD 464
Query: 58 KRAVVPLRNCIFIFCTHLPKSYISENSFQD 87
+ ++ + H + ++ ENS +D
Sbjct: 465 VKNLIAACQAL-----HRVRYFLQENSSRD 489
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 213/493 (43%), Positives = 298/493 (60%)
Query: 1 MIDLLEDCVSQYHIYVEKLE-----EREDC-NVNQSEEKECRKETEGSKGECKP--FLKY 52
MI LLED QY++Y+E L +R+D +V + + E + + +P F Y
Sbjct: 371 MIRLLEDPKGQYNLYLENLARANNVKRKDTGSVFKRKGNEQNENIVEQVSDTRPQSFQDY 430
Query: 53 VKERFKRAVVPLRNCIFIFCTHLPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEEL 112
+ E+F L CTHLP + +S + M L+ L D V E +
Sbjct: 431 LPEKFSELRKDLDLHFSSLCTHLPTALLSSQAATRMYEAIDLVRDVTILAILDGVTGEGV 490
Query: 113 EKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDEL-NLPCTTSKLLLED 171
+ + + EG S F + ++ + L +LR S+ E+ LP + + L+++
Sbjct: 491 KSVLIPN-GEG-SDRFSSQHVTVE-----DDYLKLLR----SIPEIFPLPAVSDRHLIKE 539
Query: 172 FCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGD 231
C A L FSTAS S +L++ P+ LVIDEAAQLKE ES+IP+QL G+ H +L+GD
Sbjct: 540 LCLGHACLLFSTASCSARLYTGT--PIQLLVIDEAAQLKECESSIPMQLPGLRHLILVGD 597
Query: 232 ECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQIL 291
E QLPAMV S+I+ EAGFGRSLFERL L H K++LN+QYRMH SIS FPN + Y +IL
Sbjct: 598 ERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHCSISSFPNKELYGKKIL 657
Query: 292 DGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIY---HSCRNMVEVSVVIKILQKLY 348
D V+ ++Y K YLPG GPYSFINI G EE+ S +N VEV VV I+ L
Sbjct: 658 DAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNVEVVVVAAIIANLL 717
Query: 349 KAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDG--FTVKVKSIDGFQGGEEDIII 406
+ +K ++++GV+SPY AQ +AI++KI G F+++++++DGFQGGEEDIII
Sbjct: 718 QVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIII 777
Query: 407 ISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQC 466
+STVR N G +GF+ +R NV LTRAR CLWILGNE TL++S+S+W L+ DAK R C
Sbjct: 778 VSTVRSNGVGRVGFLGNRRRTNVLLTRARFCLWILGNEATLMNSKSVWRNLIQDAKERGC 837
Query: 467 FFNADEDRNVAKA 479
F +A ED ++A+A
Sbjct: 838 FHSAGEDESLAQA 850
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 833 (298.3 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 172/313 (54%), Positives = 218/313 (69%)
Query: 144 CLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVI 203
C+ LR L +P K + FC + A + F TAS + ++ + ++ LV+
Sbjct: 377 CVDCLRTLRLLSKRFEIPALLMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSIDMLVV 436
Query: 204 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHS 263
DEAAQLKE ES LQL G++HAVLIGDE QLPAMV S++ ++A F RSLFERL SL H
Sbjct: 437 DEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGHK 496
Query: 264 KHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGS 323
KHLLNVQYRMHPSISLFPN++FY +I D VK +Y+K +L G G +SFIN+ G
Sbjct: 497 KHLLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGK 556
Query: 324 EEF-IYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYE 382
EEF HS +NMVE++VV +IL L K +K K+S+GV+SPY AQ AI+++IG +Y
Sbjct: 557 EEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYT 616
Query: 383 N-KDG-FTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
+ D FT+ V+S+DGFQGGEEDIIIISTVR N G+IGF+S QR NVALTRARHCLW+
Sbjct: 617 SVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWV 676
Query: 441 LGNERTLISSESI 453
+GNERTL S SI
Sbjct: 677 IGNERTLSLSGSI 689
Score = 82 (33.9 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 1 MIDLLEDCVSQYHIYV---EKLEEREDCNVNQSEEKECRKETEGSKGECKP-------FL 50
+ID+LE+ S Y Y+ E+ E +E N+ + + K GSK + F
Sbjct: 246 VIDILENAESSYKKYLLLSERKENQETKNILTAFGEFVMKMFLGSKETPEKEEEIILTFG 305
Query: 51 KYVKERF---KRAVVPLRNCIFIFCTHLPKSYISENSFQDMVALKILLHTFGTLL 102
++V E+F + ++ + THLPKS++S N ++M+ + L T L
Sbjct: 306 EFVMEKFDGLSETMKKIQKDMVDLYTHLPKSFLSSNDVKNMIVARQALRQARTFL 360
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 170/317 (53%), Positives = 214/317 (67%)
Query: 175 KRASLFFSTASSSYKLHSV-------EIKPLNF--LVIDEAAQLKESESTIPLQLAGINH 225
K LF ST L S+ E K N LV+DEAAQLKE ES LQL G+ H
Sbjct: 316 KLRKLFLSTCGWKQSLESIIDLLENTETKTGNIEVLVVDEAAQLKECESVAALQLPGLRH 375
Query: 226 AVLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQF 285
A+LIGDE QLPAMV + ++A FGRSLFERL L H KHLL+VQYRMHPSIS FP +F
Sbjct: 376 AILIGDEFQLPAMVHNDQCEKAKFGRSLFERLVLLGHKKHLLDVQYRMHPSISRFPYKEF 435
Query: 286 YRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEF-IYHSCRNMVEVSVVIKIL 344
Y +I D ANV+ Y+K +L G G +SFIN+ G EEF S +NMVEV+VV +I+
Sbjct: 436 YGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGDSPKNMVEVAVVSEII 495
Query: 345 QKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDG--FTVKVKSIDGFQGGEE 402
L+K K K+S+GV++PY Q AI+++I +Y + G FTV V+S+DGFQGGEE
Sbjct: 496 SNLFKVSRERKMKMSVGVITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEE 555
Query: 403 DIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAK 462
DIIIISTVR N+ G +GF+S QR NVALTRARHCLW++GNE TL S SIW L+ D+K
Sbjct: 556 DIIIISTVRSNSNGKVGFLSNRQRANVALTRARHCLWVIGNESTLARSGSIWANLISDSK 615
Query: 463 ARQCFFNADEDRNVAKA 479
R+CF++A +D+ + A
Sbjct: 616 RRKCFYDAKDDKRLRDA 632
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 463 (168.0 bits), Expect = 4.9e-46, Sum P(4) = 4.9e-46
Identities = 116/303 (38%), Positives = 175/303 (57%)
Query: 162 CTTSKLLLED-FCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQ 219
C ++ L E + +S+ FST S+S L KP N +++DEA Q E+ IPL
Sbjct: 3656 CVFNRRLDEKKMILEHSSICFSTLSASGSNLVQSSFKP-NVVIVDEATQSCETSCIIPLS 3714
Query: 220 LAG--INHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSI 277
L + +L+GD QLP + SK S G G SLFERL+ + +LNVQYRMHP I
Sbjct: 3715 LGAKSMKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLSKVLPVS-MLNVQYRMHPLI 3773
Query: 278 SLFPNLQFYRNQILDGANV-KSKSYEKHYLPGTELGPYSFINIIGGSEEFIYHSCRNMVE 336
S FP+ QFY + + DG NV S +Y + + G F ++ EE S +N +E
Sbjct: 3774 SKFPSSQFYHDILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKTSIKNQLE 3833
Query: 337 VSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD-GFTVKVKSID 395
+++V +++KL + +KQ S G+V+PY Q RK+I Y+ + +++K+ID
Sbjct: 3834 ITMVFTLIKKLTQDHPETKQ-YSFGIVTPYKLQ----RKEIEDAYKQLNLSLNIEIKTID 3888
Query: 396 GFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWG 455
FQG E+DI+I+S VR SIGF+S +R+NV++TRA++ L+I+GN TL+ + WG
Sbjct: 3889 SFQGSEKDIMIMSCVR---NESIGFLSDRRRINVSITRAKYGLFIIGNA-TLLKLDRTWG 3944
Query: 456 ALV 458
L+
Sbjct: 3945 ELI 3947
Score = 64 (27.6 bits), Expect = 8.7e-45, Sum P(2) = 8.7e-45
Identities = 29/125 (23%), Positives = 51/125 (40%)
Query: 1 MIDLLEDCVSQYHIYVEKLEERED-CNVNQSEEKECRKETEGSKGECKPFLKYVKERFKR 59
MID ++ C+ Y Y+ L+ +D N E +E + + + L+ V F
Sbjct: 2019 MIDSIDSCIGLYPNYLPSLKYLKDFINNYPMEFREYSMKLVVQRERTRMDLRKVLGDFSN 2078
Query: 60 AVVPLRNCIFIFCTHLPKSYISENSFQDMVALKILLHTFGTLLFKDNV----VSEELEKL 115
++ P I HL ++ I N+F + LK + + + D V VS L +
Sbjct: 2079 SLNPQIYKEIIAHAHLHRTLIEFNNFFQRMHLKEFMDSISSYGQNDQVDESDVSRRLNNV 2138
Query: 116 FSHSV 120
S +
Sbjct: 2139 HSKQI 2143
Score = 48 (22.0 bits), Expect = 4.9e-46, Sum P(4) = 4.9e-46
Identities = 30/130 (23%), Positives = 53/130 (40%)
Query: 80 ISENSFQDMVALKILL---HTFGTLLFKDNVVSEE--------LEKLFSHSVDEGIS-SA 127
+ E+ +Q +++ KIL+ H + LL K+ + SE LE+L H +
Sbjct: 2610 LCEDIYQKILSFKILIETSHCYQRLLLKEILESENDTDQYYSILEQLIQHQRSRKLLFQD 2669
Query: 128 FVGKR---YLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKL-LLEDFCFKRASLFFST 183
F + Y + + RRS ++ S+ L LP T + L+ F L
Sbjct: 2670 FSNHKFTEYTKEFNYRRSGKTNI------SIPTLTLPKTHEDVSLISRSSFNEIYLLIKK 2723
Query: 184 ASSSYKLHSV 193
+ Y +S+
Sbjct: 2724 YQNDYSSYSI 2733
Score = 45 (20.9 bits), Expect = 4.9e-46, Sum P(4) = 4.9e-46
Identities = 8/34 (23%), Positives = 20/34 (58%)
Query: 1 MIDLLEDCVSQYHIYVEKLEEREDCNVNQSEEKE 34
M+ ++ED +S+Y + ++LE + +E++
Sbjct: 21 MVTIVEDIISKYPDFNDELENAKYVLAESKDEQD 54
Score = 40 (19.1 bits), Expect = 4.9e-46, Sum P(4) = 4.9e-46
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 47 KPFLKYVKERFKRAVVPLRNCIFIFCTHLPK-SYISE 82
K +V +R KR + + +CI ++ +LP Y+ +
Sbjct: 2007 KNIFVHVDDR-KRMIDSIDSCIGLYPNYLPSLKYLKD 2042
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 464 (168.4 bits), Expect = 8.8e-45, Sum P(2) = 8.8e-45
Identities = 108/284 (38%), Positives = 170/284 (59%)
Query: 175 KRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 232
+ A++ F+T AS S + S K N +++DE+ Q E S IPL + I +L+GD
Sbjct: 1707 RNATIIFATLSASGSKPIRS-NFKA-NIVLVDESTQSSEPASLIPLCIGNIEKLILVGDP 1764
Query: 233 CQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILD 292
QLP + S S + G SLFERL+ + + +LN QYRMHP+IS FP+ QFY++++LD
Sbjct: 1765 LQLPPTIFSSESAKNGLNISLFERLSKVLPVE-MLNTQYRMHPTISRFPSNQFYKDRLLD 1823
Query: 293 GANVKSKSYEKH-YLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAW 351
G NVKS Y +H + + GP F ++I EE S +N +E+++V +++KL + +
Sbjct: 1824 GDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDY 1883
Query: 352 VGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
K K S G+++PY Q I+++ ++ ++ +IDG QG E+DIII+S VR
Sbjct: 1884 PECK-KFSFGIITPYKLQKSEIKEQ-HKQFNYP--LNIETSTIDGVQGSEKDIIILSCVR 1939
Query: 412 CNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWG 455
IGF+S +R+NVALTRA+ L+++GN + L+ + WG
Sbjct: 1940 SER---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1979
Score = 57 (25.1 bits), Expect = 8.8e-45, Sum P(2) = 8.8e-45
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 77 KSYISENSFQ---DMVALKILLHTFGTLLFKDNVVSEELEKLFSHSVDEGISSAFVGKRY 133
++ I+E+ Q ++ +K L T + + K+N ++ +EK+++ S+ + F
Sbjct: 1160 RNIINESKIQFNTNINGIKHRLKTDFSKIQKNNTSNQNIEKIYNKSLSLMVLLEFNHFSQ 1219
Query: 134 LLQLHQRRSECLSVLRNLWNSLDELN-LPCTTSKLLLEDFCFKRASLFFSTAS------- 185
+L ++ C L L + L + N + S ++ F S F ST
Sbjct: 1220 YSELREKTKTCRQYLNQLNSELAKNNKMKLEFSDIVKGKFFDNLVSNFESTTKINGSTLK 1279
Query: 186 -SSYKL-HSVEIKPLNFLVIDEAAQLKESE 213
S+KL +S ++ ++ L +E QL +SE
Sbjct: 1280 IPSFKLLNSEKLGLISKLQFNEIYQLIKSE 1309
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 481 (174.4 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 124/319 (38%), Positives = 170/319 (53%)
Query: 159 NLPCTTSKLLLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIP 217
N ++ LE A + F+T SSS KL S + +VIDEAAQ E P
Sbjct: 735 NFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPP 794
Query: 218 LQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSI 277
L L G VL+GD QLPA V SK + + RSLFER LL VQYRMHP I
Sbjct: 795 LAL-GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQI 853
Query: 278 SLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIYHSC--RNMV 335
FP+ FY+ ++ D ++ S E +Y L PY F NI G E S N+
Sbjct: 854 RDFPSRYFYQGRLKDSESISSAPDEIYYKDPV-LRPYLFFNISHGRESHRGGSVSYENVD 912
Query: 336 EVSVVIKI---LQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVK 392
E + + LQK K+ +G+ KVS+GV++PY Q ++ + G+ + + +
Sbjct: 913 EARFCVGVYMHLQKTLKS-LGAG-KVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYIN 970
Query: 393 SIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSES 452
++D FQG E D+II+S VR + G +GF+S +R+NVALTRAR LW++GN L+ SE
Sbjct: 971 TVDAFQGQERDVIIMSCVRASGHG-VGFVSDIRRMNVALTRARRALWVMGNASALMKSED 1029
Query: 453 IWGALVCDAKARQCFFNAD 471
W AL+ DA+ R CF D
Sbjct: 1030 -WAALISDARGRNCFMEMD 1047
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 476 (172.6 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 110/281 (39%), Positives = 168/281 (59%)
Query: 176 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 235
RAS+ FST S S + +++DE+ Q E S IPL + I +L+GD QL
Sbjct: 1357 RASIVFSTLSGSGSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLILVGDPLQL 1416
Query: 236 PAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
P + S S E G SLFERL+ + + +L+VQYRMHP+IS FP+ QFYR+++LDG N
Sbjct: 1417 PPTIFSTESAENGLNISLFERLSKVLPVE-MLHVQYRMHPTISRFPSNQFYRDRLLDGDN 1475
Query: 296 VKSKSYEKH-YLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGS 354
VKS Y +H + + GP F ++I EE S +N +E+++V +++KL + +
Sbjct: 1476 VKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYPEC 1535
Query: 355 KQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNA 414
K K S G+++PY Q I+++ ++ ++ +IDGFQG E+DIII+S VR
Sbjct: 1536 K-KFSFGIITPYKLQKSEIKEQ-HKQFNYP--LNIETSTIDGFQGSEKDIIILSCVRSER 1591
Query: 415 GGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWG 455
IGF+S +R+NVALTRA+ L+++GN + L+ + WG
Sbjct: 1592 ---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1628
Score = 37 (18.1 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 1 MIDLLEDCVSQYHIYVEKLEE 21
+ID LED + + + K++E
Sbjct: 307 LIDSLEDIENYFPTFQSKIQE 327
Score = 37 (18.1 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 8 CVSQYHIYVEKLEEREDCNVNQSEEKECRKETEGS 42
CV Q +E LE+ + + +K+ KE + +
Sbjct: 95 CVDQLEFIIEALEDDFFTTLIEKLKKKLLKEIKNN 129
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 468 (169.8 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 109/283 (38%), Positives = 169/283 (59%)
Query: 175 KRASLFFSTASSSYKLHSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 233
+ A++ FST S+S SV N +++DE+ Q E S IPL + I +L+GD
Sbjct: 1508 RNANIVFSTLSASGS-GSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPL 1566
Query: 234 QLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDG 293
QLP + S S E G SLFERL+ + + +LN QYRMHP+IS FP+ QFY++++LDG
Sbjct: 1567 QLPPTIFSSGSAENGLNISLFERLSKVLPVE-MLNTQYRMHPTISRFPSNQFYKDRLLDG 1625
Query: 294 ANVKSKSYEKH-YLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWV 352
NVKS Y +H + + GP F ++I EE S +N +E+++V +++KL + +
Sbjct: 1626 DNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYP 1685
Query: 353 GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 412
K K S G+++PY Q I+++ ++ ++ +IDG QG E+DIII+S VR
Sbjct: 1686 ECK-KFSFGIITPYKLQKSEIKEQ-HKQFNYP--LNIETSTIDGVQGSEKDIIILSCVRS 1741
Query: 413 NAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWG 455
IGF+S +R+NVALTRA+ L+++GN + L+ + WG
Sbjct: 1742 ER---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1780
Score = 47 (21.6 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 31/134 (23%), Positives = 58/134 (43%)
Query: 90 ALKILLHTFGTLLFKDNVVSEELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLR 149
A+K L T + + K+N ++ +EK+++ S+ + F +L ++ C
Sbjct: 978 AIKNRLKTDISKIQKNNTSNQNIEKIYNKSLSLMVLLEFNHFSQYSELKEKTKTCRHKYN 1037
Query: 150 NLWNSLDELN-LPCTTSKLLLEDFCFKRASLFFSTAS--------SSYKL-HSVEIKPLN 199
L + L + N S ++ F S F ST S+KL +S ++ ++
Sbjct: 1038 QLNSELAKKNRTKLEFSNIVKGKFFDNLVSNFESTTKINGSTLKIPSFKLLNSEKLGLIS 1097
Query: 200 FLVIDEAAQLKESE 213
L +E QL +SE
Sbjct: 1098 KLQFNEIHQLIKSE 1111
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 464 (168.4 bits), Expect = 4.2e-43, Sum P(2) = 4.2e-43
Identities = 136/437 (31%), Positives = 235/437 (53%)
Query: 98 FGTLLFKDNVVSEELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDE 157
+ +++ K + + E+LEK S + I A + R + + + L +R S +
Sbjct: 1414 YDSIIKKRDSLREDLEKFRSTGKNSSILEAQL--REITKQKNMLEQSLDDMRERQRSTNR 1471
Query: 158 LNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKP-LNF--LVIDEAAQLKESES 214
NL K +++ + A + +T S+S H + + L F ++IDEAAQ E S
Sbjct: 1472 -NLDVL--KKQIQNQLLQEADIVCATLSASG--HELLLNAGLTFRTVIIDEAAQAVELSS 1526
Query: 215 TIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL-NHSKHLLNVQYRM 273
IPL+ G V++GD QLP V SK S + G+ +SL+ R+ N S LL++QYRM
Sbjct: 1527 IIPLKY-GCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRM 1585
Query: 274 HPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIYH-SCR 332
+P IS FP+ FY +++LDG N+ + + + + +LG Y F N+ G+E F S
Sbjct: 1586 NPEISRFPSKFFYNSKLLDGPNMSAVT-SRPWHEDPQLGIYRFFNV-HGTEAFSNSKSLY 1643
Query: 333 NMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVK 392
N+ E S ++ + ++L + ++ + IGVV+PY +Q +R + +Y + + +
Sbjct: 1644 NVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIH 1703
Query: 393 SIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSES 452
++DGFQG E+DIII S VR + G IGF+ +R+NVALTRA+ L+I+GN + L+ E
Sbjct: 1704 TVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQ-ED 1762
Query: 453 IWGALVCDAKARQCF--FNADEDRNVAKARLDIGKELVE--IGAESLTSTNQRGKTTLCY 508
I+ +L+ DAK R + +A++ +N +K+ ++ L + S + + +C
Sbjct: 1763 IFYSLIEDAKTRGVWRDLSANQFKN-SKSISNVSTHLASNNLNLASRDTPIKSPSVGICE 1821
Query: 509 DKDGETYREERSTATDS 525
+K E ++ ++ DS
Sbjct: 1822 EKQ-EAHKVKKRHNIDS 1837
Score = 38 (18.4 bits), Expect = 4.2e-43, Sum P(2) = 4.2e-43
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 23 EDCNVNQSEEKECRKETEGSKG 44
+D N + S+E E E S G
Sbjct: 978 DDKNTSTSDEDTSESEEESSNG 999
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 465 (168.7 bits), Expect = 8.0e-43, P = 8.0e-43
Identities = 119/309 (38%), Positives = 165/309 (53%)
Query: 169 LEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 227
LE A + F+T SSS KL S + +VIDEAAQ E PL L G V
Sbjct: 908 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCV 966
Query: 228 LIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYR 287
L+GD QLPA V SK + + RSLFER LL VQYRMHP I FP+ FY+
Sbjct: 967 LVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 1026
Query: 288 NQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIYHSC--RNMVEVSVVIKI-- 343
++ D +V + E +Y L PY F +I G E S N+ E + +
Sbjct: 1027 GRLTDSESVSTAPDEIYYKDSV-LKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVYL 1085
Query: 344 -LQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEE 402
LQ+ K+ G K VS+GV++PY Q ++ + G+ + + + ++D FQG E
Sbjct: 1086 HLQRTLKSLGGGK--VSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQER 1143
Query: 403 DIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAK 462
D+II+S VR + G +GF++ +R+NVALTRA+ LW++GN L+ E W AL+ DAK
Sbjct: 1144 DVIIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCED-WAALITDAK 1201
Query: 463 ARQCFFNAD 471
AR CF +
Sbjct: 1202 ARNCFMEME 1210
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 449 (163.1 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 111/297 (37%), Positives = 169/297 (56%)
Query: 177 ASLFFSTASSSYK--LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 234
+ + ST S S L ++ IK + ++IDEA Q E S IPL+ G +++GD Q
Sbjct: 1562 SDIICSTLSGSAHDVLATMGIK-FDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQ 1619
Query: 235 LPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGA 294
LP V S + + +SLF R+ N S +LL+VQYRMHPSIS FP+ +FY+ ++ DG
Sbjct: 1620 LPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGP 1678
Query: 295 NVKSKSYEK-HYLPGTELGPYSFINIIGGSEEFIYH--SCRNMVEVSVVIKILQKLYKAW 351
+ + H L L PY F +II G +E S NM E+ V I+++ L++ +
Sbjct: 1679 GMDILNKRPWHQLE--PLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF 1736
Query: 352 VGSKQKVS-IGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 410
IG++SPY Q +RK+ + ++ +IDGFQG E++II+IS V
Sbjct: 1737 DNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCV 1796
Query: 411 RCN-AGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQC 466
R + S+GF+ +R+NVALTRA+ +W+LG++R+L S+ +W L+ DAK R C
Sbjct: 1797 RADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSC 1852
Score = 39 (18.8 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 53 VKERFKRAVVPLRNCIFIFCTHLPKSYISENSFQDMVALKILLHTFGT 100
+K+ FK PL ++ HL KSY + + L + L+ FG+
Sbjct: 328 LKKTFK---FPLEPIFKMWYNHLSKSYHDKPLDFLLRGLTMFLNKFGS 372
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 453 (164.5 bits), Expect = 3.2e-41, P = 3.2e-41
Identities = 108/297 (36%), Positives = 167/297 (56%)
Query: 176 RASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 234
R+ + ST S S Y K + +++DEAAQ E + IPL+ + +L+GD Q
Sbjct: 1584 RSQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLR-HDVKKCILVGDPQQ 1642
Query: 235 LPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGA 294
LP SK++ + + SLF+RL + + +L QYRMHP IS FP+ FYR ++ DG
Sbjct: 1643 LPPTTISKVATKFQYEISLFQRLMNCGMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGK 1702
Query: 295 NVKSKSYEKHYLPGTELGPYSFINIIG--GSEEFIYHSCRNMVEVSVVIKILQKLYKAWV 352
NV+ + + + GP F ++ G + S RN EV + I+ +L +
Sbjct: 1703 NVREYKQDYYNDSASRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYP 1762
Query: 353 GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 412
+K + IGV++PY +Q+V + Y+N V+V +IDGFQG E+D +I S+VR
Sbjct: 1763 NTKD-LEIGVITPYKSQSVDLFNAFKG-YQN-----VEVSTIDGFQGKEKDFVIFSSVRA 1815
Query: 413 NAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAK-ARQCFF 468
++G SIGF+S +R+NV LTRA++ + ILGN +L+S+ WG LV D + C+F
Sbjct: 1816 HSGHSIGFLSDIRRMNVGLTRAKYSMVILGNS-SLLSNNDDWGNLVNDLRQTNNCYF 1871
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 442 (160.7 bits), Expect = 4.6e-40, P = 4.6e-40
Identities = 105/267 (39%), Positives = 154/267 (57%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1577 VIIDEAAQCVELSALIPLKY-GASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQN 1635
Query: 261 NHSK-HLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI 319
+ K HLL+ QYRMHP ISL+P+ +FY + DG+++ +K ++ + LGPY F ++
Sbjct: 1636 HPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDM-AKLRQQPWHDNPLLGPYRFFDV 1694
Query: 320 IGGSEEFIY-HSCRNMVEVSVVIKILQKLYKAWVGS-KQKVSIGVVSPYTAQAVAIRKKI 377
G E S N E++V I+I K + S K IG+++PY AQ A+R+K
Sbjct: 1695 EGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQKF 1754
Query: 378 GSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHC 437
+ ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1755 QERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSS 1814
Query: 438 LWILGNERTLISSESIWGALVCDAKAR 464
LWILG+ R L E W L+ D+KAR
Sbjct: 1815 LWILGDSRALRQGE-FWNKLIEDSKAR 1840
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 440 (159.9 bits), Expect = 7.4e-40, P = 7.4e-40
Identities = 122/367 (33%), Positives = 194/367 (52%)
Query: 110 EELEK-LFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLL 168
+EL K L + S++E + K + ++++RSE L N ++
Sbjct: 1447 DELRKRLATESLEEKEITELEEK--IRAINKKRSELAKKLDEQREKASIANRTKEINRRN 1504
Query: 169 LEDFCFKRASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 227
++ A + ST S S++ L + + ++IDEA Q E + IPL+ G +
Sbjct: 1505 IQARILSEAQVLCSTLSGSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRY-GCKKCI 1563
Query: 228 LIGDECQLPAMVASKISDEAGFGRSLFERLTSLNH--SKHLLNVQYRMHPSISLFPNLQF 285
++GD QLP V S+ + + +SLF R+ NH S ++L+VQYRMHP IS FP+ +F
Sbjct: 1564 MVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK-NHPDSVYMLDVQYRMHPMISKFPSSEF 1622
Query: 286 YRNQILDGANVKSKSYEK-HYLPGTELGPYSFINIIGGSEEF-IYHSCRNMVEVSVVIKI 343
Y +++ DG + + H P L PY F +I+G E+ + S N E V +++
Sbjct: 1623 YNSKLKDGDGMLELNTRPWHKDP--PLTPYRFFDILGKHEKNELTRSLFNTDEAIVALQL 1680
Query: 344 LQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEED 403
KL + K IG++SPY Q I++ +Y + ++DGFQG E++
Sbjct: 1681 TDKLMQLLPQDKFSGKIGIISPYKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKE 1740
Query: 404 IIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKA 463
III+S VR +A G++GF+S +R+NVALTRA+ LWILGN+ +L +E +W L+ DA
Sbjct: 1741 IIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILGNKDSLSRNE-VWKKLLTDAGE 1799
Query: 464 RQCFFNA 470
R C A
Sbjct: 1800 RNCITQA 1806
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 426 (155.0 bits), Expect = 3.8e-39, P = 3.8e-39
Identities = 99/305 (32%), Positives = 161/305 (52%)
Query: 175 KRASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 233
+ A++ F+T S S L + + + ++IDEAAQ E + IPL L+GD
Sbjct: 460 EEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLATR-CKQVFLVGDPK 518
Query: 234 QLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDG 293
QLPA V S ++ ++G+G S+FERL + +L QYRMHP I FP+ QFY + DG
Sbjct: 519 QLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDG 578
Query: 294 ANVKSKSYEKHYLPGTELGPYSFINIIGGSEEF---IYHSCRNMVEVSVVIKILQKLYKA 350
+++++++ + + GP+ F +I G E S N+ EV V+ I +L
Sbjct: 579 SDIEAQT-TRDWHKYRCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTM 637
Query: 351 WVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 410
+ K + ++SPY Q + + + + V + ++DGFQG E+D+ I S V
Sbjct: 638 YPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCV 697
Query: 411 RCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNA 470
R N G IGF+S +R+NV +TRA+ + ++G+ TL S+ +W L+ A+ R F
Sbjct: 698 RANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATL-KSDPLWKNLIESAEQRNRLFKV 756
Query: 471 DEDRN 475
+ N
Sbjct: 757 SKPLN 761
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 424 (154.3 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 105/285 (36%), Positives = 156/285 (54%)
Query: 175 KRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 233
K AS+ FST A S K P + ++IDE+ Q E S IPL L + +L+GD
Sbjct: 1305 KSASIVFSTLAGSGSKAIFENFSP-DIVLIDESTQSSEPTSIIPLSLGSVKKLILVGDPV 1363
Query: 234 QLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDG 293
QLP + SK + G SLFERL + LN QYRMHP S F + +FY + DG
Sbjct: 1364 QLPPTIFSKQGADCGLKISLFERLAK-SIDVQFLNTQYRMHPVTSKFISEEFYNGTLKDG 1422
Query: 294 ANVKSKSYEK---HYLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKA 350
NV SY H+ P GP F ++ +++ I S N E+ V ++++L +
Sbjct: 1423 ENVSIDSYNNCKFHFDPS--FGPMKFFDLPKSNQKVIKKSIMNQDEIDKVFTLIKELIEK 1480
Query: 351 WVGSKQKVSIGVVSPYTAQAVAIRKKIG-SEYENKDGFTVKVKSIDGFQGGEEDIIIIST 409
+ K K+S G+++PY Q I++++ SE+ N + V +IDG QG E+DIII+S
Sbjct: 1481 YPECK-KLSFGIITPYKLQMNQIKEQLNRSEHHN---LNISVSTIDGVQGSEKDIIIMSC 1536
Query: 410 VRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
VR IGF+S +R+NVALTRA+ L+++G + L + ++ W
Sbjct: 1537 VRSIEKFGIGFLSDRRRINVALTRAKLGLYVIGTYKVL-AKDNTW 1580
Score = 37 (18.1 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 85 FQDMVALKILLHTFGTLLFKDNVVSEELEKLFSHSVDEGISS 126
F+D ++ +L+ LL +N +L KL ++E S
Sbjct: 751 FEDPKSVLFILNELNKLLKNENNNQNKLNKL-KRIIEEDTKS 791
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 425 (154.7 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 115/360 (31%), Positives = 189/360 (52%)
Query: 110 EELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLLL 169
EELEK + D + +GK +++++ V L + N +
Sbjct: 1284 EELEKQIDVARDVAEDTKSLGKELQNKINEKNLAEQKV-EELQSQSFTKNKEVDLLRKKA 1342
Query: 170 EDFCFKRASLFFSTASSSYKLHS-VEIKPLNF--LVIDEAAQLKESESTIPLQLAGINHA 226
+ K+A + +T S S H V LNF ++IDEAAQ E ++ IPL+ G
Sbjct: 1343 QKAILKQADVVCATLSGSG--HDLVAHSSLNFSTVIIDEAAQAVELDTIIPLRY-GAKKC 1399
Query: 227 VLIGDECQLPAMVASKISDEAGFGRSLFERLT-SLNHSKHLLNVQYRMHPSISLFPNLQF 285
+L+GD QLP V SK + + +SLF R+ + ++ LL++QYRMHP IS FP+ +F
Sbjct: 1400 ILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRMHPDISHFPSKKF 1459
Query: 286 YRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQ 345
Y +++ DG N+ K+ + ++ + Y ++ G S N+ EV ++ ++
Sbjct: 1460 YDSRLEDGDNMAEKTQQVWHV-NPKFTQYRLFDVRGKERTSNTMSTYNLEEVEYLVNMVD 1518
Query: 346 KLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDII 405
+L + IGV++PY +Q +R+ +Y T+ ++++DGFQG E+DII
Sbjct: 1519 ELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDII 1578
Query: 406 IISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQ 465
S V+ + IGF+ +R+NVALTRAR L I+GN TL ++ +WG+LV DA +R+
Sbjct: 1579 FFSCVKSYSKHGIGFLRDFRRLNVALTRARSSLLIIGNMETL-KTDDLWGSLVDDALSRK 1637
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 417 (151.9 bits), Expect = 2.6e-37, P = 2.6e-37
Identities = 110/282 (39%), Positives = 157/282 (55%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
+P + ++IDEA+Q KE+E+ IP+ L +L+GD QLP V S+ + E GF +SL
Sbjct: 1953 EPFSCVIIDEASQAKETETLIPM-LYRCPSVILVGDPNQLPPTVVSQKAKEFGFDQSLMA 2011
Query: 256 RLTSLNHSKH-------LLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPG 308
RL H + LL++QYRMHP I FP+ Y + + + K + P
Sbjct: 2012 RLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDCETAQKRCSLSW-P- 2069
Query: 309 TELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTA 368
PY +++ G E S N EVS+V +L+ L K +Q V +GV++PY A
Sbjct: 2070 --FKPYKVFDVMDGRETKERDSFINHKEVSLVGLLLKLLCK-----EQAVRVGVITPYNA 2122
Query: 369 QAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAG-GSIGFISKPQRV 427
Q I I + NK V+V ++DGFQG E D II+S VR ++ GSIGF+ QR+
Sbjct: 2123 QKHRILDAIKTSGINKQ-LQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQRM 2181
Query: 428 NVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFN 469
NV +TRA+ L+ILG+ RTL +S WGAL+ DA R+C N
Sbjct: 2182 NVTITRAKFSLFILGHLRTL-REQSDWGALIEDAGRRECIIN 2222
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 411 (149.7 bits), Expect = 2.9e-37, P = 2.9e-37
Identities = 118/341 (34%), Positives = 176/341 (51%)
Query: 145 LSVLRNLWNSLDELNLPCTTSKLLL----EDFCFKRASLFFSTA--SSSYKLHSVEIKPL 198
L L L N + EL++ T + L L E +A + T ++ +L K +
Sbjct: 543 LKKLIKLKNQVGELSVADTNNYLKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTV 602
Query: 199 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLT 258
+IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL
Sbjct: 603 ---LIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLV 658
Query: 259 SLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELG-PYSFI 317
L H L VQYRMHP +S FP+ FY + +G + E+ P + P F
Sbjct: 659 FLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFW 718
Query: 318 NIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ-AVAIR- 374
G E +S N VE V KI+ KL+K + +Q IGV++PY Q A ++
Sbjct: 719 ANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQF 775
Query: 375 KKIGSEY-ENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALT 432
+ S + +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALT
Sbjct: 776 MSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALT 835
Query: 433 RARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADED 473
RA++ L ILGN R+L + +W L+ + + C + D
Sbjct: 836 RAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDGPLD 875
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 411 (149.7 bits), Expect = 2.9e-37, P = 2.9e-37
Identities = 118/341 (34%), Positives = 176/341 (51%)
Query: 145 LSVLRNLWNSLDELNLPCTTSKLLL----EDFCFKRASLFFSTA--SSSYKLHSVEIKPL 198
L L L N + EL++ T + L L E +A + T ++ +L K +
Sbjct: 543 LKKLIKLKNQVGELSVADTNNYLKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTV 602
Query: 199 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLT 258
+IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL
Sbjct: 603 ---LIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLV 658
Query: 259 SLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELG-PYSFI 317
L H L VQYRMHP +S FP+ FY + +G + E+ P + P F
Sbjct: 659 FLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFW 718
Query: 318 NIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ-AVAIR- 374
G E +S N VE V KI+ KL+K + +Q IGV++PY Q A ++
Sbjct: 719 ANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQF 775
Query: 375 KKIGSEY-ENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALT 432
+ S + +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALT
Sbjct: 776 MSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALT 835
Query: 433 RARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADED 473
RA++ L ILGN R+L + +W L+ + + C + D
Sbjct: 836 RAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDGPLD 875
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 405 (147.6 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 110/317 (34%), Positives = 164/317 (51%)
Query: 167 LLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 226
L+L++ +L FS AS K+ + ++IDEAAQ E+ + IP+Q G
Sbjct: 558 LVLDEADIVATTLSFSGASLLTKMAG----GFDIVIIDEAAQAVETSTLIPIQ-HGCKKV 612
Query: 227 VLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFY 286
VL+GD QLPA + S ++ + + +SLF+RL N S H+L QYRMH I FP+ FY
Sbjct: 613 VLVGDPKQLPATIISPLAIKYKYDQSLFQRLQEKN-SPHMLTTQYRMHSLIRAFPSRHFY 671
Query: 287 RNQILDGANVKSKSYEKHYLPGTELGPYSFINII-------GGSEEFIYHSCRNMVEVSV 339
++ +LDG N+ S++ HY GP F ++ GG F H C+ +
Sbjct: 672 QDLLLDGPNIPSRA--THYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEHECK------M 723
Query: 340 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQG 399
+ + Q K + IG++SPY Q +A+R+ ++N G + + ++DGFQG
Sbjct: 724 AMYLFQLFTKVYPDEDFASRIGIISPYRQQVLALREI----FKNYPG--ISIDTVDGFQG 777
Query: 400 GEEDIIIISTVRC--NAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGAL 457
E +III S VR G IGF+S +R+NVALTR R L ILGN + L S W L
Sbjct: 778 REREIIIFSCVRAPVEEGAGIGFLSDVRRMNVALTRPRSSLLILGNTKAL-SINKDWNEL 836
Query: 458 VCDAKARQCFFNADEDR 474
+ + Q +D+
Sbjct: 837 IQHTQNNQQLIPVTKDQ 853
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 399 (145.5 bits), Expect = 5.2e-35, P = 5.2e-35
Identities = 101/271 (37%), Positives = 150/271 (55%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 672
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELG-PYSFINI 319
+ LNVQYRMHP +S FP+ FY + +G ++ + P P F +
Sbjct: 673 GLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSN 732
Query: 320 IGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA---VAIRK 375
+G E S N E S V K++ + +KA V + IGVV+PY Q V+ +
Sbjct: 733 LGNEEISASGTSYLNRTEASNVEKLVTRFFKAGV---KPGDIGVVTPYEGQRSYIVSTMQ 789
Query: 376 KIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRAR 435
G+ ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 790 NTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRAK 848
Query: 436 HCLWILGNERTLISSESIWGALVCDAKARQC 466
+ + I+GN + L S +W L+ + R+C
Sbjct: 849 YGVVIIGNPKVL-SKHELWHHLLIHFRDRKC 878
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 396 (144.5 bits), Expect = 1.6e-34, P = 1.6e-34
Identities = 120/336 (35%), Positives = 173/336 (51%)
Query: 134 LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSV 193
L++L+Q +SE L L +S DE L T E A + T +
Sbjct: 527 LIKLNQLKSE-LGEL----SSQDEKRLKQLTRAAERE--ILNNADVICCTCVGAGDPRLA 579
Query: 194 EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSL 253
++K ++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SL
Sbjct: 580 KLK-FRTVLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSL 637
Query: 254 FERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEL-G 312
FERL L S LNVQYRMHP +S FP+ FY + +G + + P L
Sbjct: 638 FERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDS 697
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA- 370
P F + +G E S N E + V KI+ + +KA V K IG+++PY Q
Sbjct: 698 PMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKD---IGIITPYEGQRS 754
Query: 371 --VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVN 428
V+ + G+ ++ + ++V S+D FQG E+D II+S VR N IGF+S P+R+N
Sbjct: 755 YIVSSMQATGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLN 813
Query: 429 VALTRARHCLWILGNERTLISSESIWGALVCDAKAR 464
VALTRA++ L ILGN + L S +W L+ K R
Sbjct: 814 VALTRAKYGLVILGNPKVL-SKHPLWNCLLQHFKER 848
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 395 (144.1 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 104/268 (38%), Positives = 148/268 (55%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVASKISDEAGFGRSLFERLTS 259
++IDE+ Q E E IPL + G +L+GD QL P ++ K+ D AG +SLFERL S
Sbjct: 703 ILIDESTQASEPECLIPLMM-GAKQVILVGDHRQLGPVLLCKKVVD-AGLSQSLFERLIS 760
Query: 260 LNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEKHYLPGTELGPYSFIN 318
L H L +QYRMHPS++ FP+ Y Q++ ++ S K P + P F N
Sbjct: 761 LGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPK-DPMFFFN 819
Query: 319 IIGGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKK 376
G SEE S N E S+ KI+ K + +GS IG+++PY Q I
Sbjct: 820 CTG-SEEISSSGTSFINTTEASICEKIVTKFLE--LGSLPG-QIGIITPYEGQRAYITSH 875
Query: 377 IGSEYE-NKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRA 434
+ + N + + +++V S+D FQG E+D II+S VR N IGF+ P+R+NVALTRA
Sbjct: 876 MQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRA 935
Query: 435 RHCLWILGNERTLISSESIWGALVCDAK 462
R L ILGN + L S + +W +L+ K
Sbjct: 936 RFGLIILGNAKVL-SKDPLWNSLISHFK 962
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 393 (143.4 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 99/270 (36%), Positives = 141/270 (52%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL +L
Sbjct: 653 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTL 711
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINII 320
L VQYRMHP++S FP+ FY + +G + + P F +
Sbjct: 712 GIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQ 771
Query: 321 GGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIG 378
G EE S N E + V K++ K+ V Q IGV++PY Q I +
Sbjct: 772 LGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYIVNYMA 828
Query: 379 SEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARH 436
+ ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 829 RNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARY 888
Query: 437 CLWILGNERTLISSESIWGALVCDAKARQC 466
+ ILGN + L S + +W L+ K +C
Sbjct: 889 GIVILGNPKVL-SKQPLWNGLLTHYKEHEC 917
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 391 (142.7 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 122/358 (34%), Positives = 186/358 (51%)
Query: 133 YLLQLHQRRSECLSVLRNLWNSLDELNLPCTT-SKLLLEDFCFKRASLFFSTASSSYKLH 191
YLLQ Q++ + L ++ N +L+ P T + + C RA++ +T SS KL
Sbjct: 1326 YLLQQLQQKEKKLQLISN------QLSPPLTQREEFEISHMCVTRANIICTTLSSCVKLA 1379
Query: 192 SVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGR 251
+ + + ++DEA Q E + +P++ G+ H VL+GD QLPA+V SK + + G
Sbjct: 1380 NY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLSN 1437
Query: 252 SLFERL-----TSLNH--SKHL-------LNVQYRMHPSISLFPNLQFYRNQILDGANVK 297
S+F+R+ T L+ S HL L+ QYRMHP I +PN FY +Q+++ A
Sbjct: 1438 SMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLIN-AECT 1496
Query: 298 SKSYEKHYLPGTELGPYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSK 355
++ + L PY IN+ S S N E V K+L ++ K + SK
Sbjct: 1497 ARF-------ASPLIPYCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKH-MPSK 1548
Query: 356 QKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAG 415
+ S G++SPY Q A+ + I S + +++D +QG E+D+IIIS R
Sbjct: 1549 -RFSYGLISPYQNQCYALSQVIPSH------MNITPQTVDSYQGLEKDVIIISNARTRG- 1600
Query: 416 GSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADED 473
GF++ QR+NVALTR R CL I GN L S E +W L+ DA+ R+ +FN D D
Sbjct: 1601 --CGFLTNYQRLNVALTRPRRCLVICGNFEDLKSVE-MWRNLLDDARKRKVYFNLDRD 1655
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 386 (140.9 bits), Expect = 3.1e-33, P = 3.1e-33
Identities = 100/279 (35%), Positives = 152/279 (54%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E IP+ + G +L+GD QL ++ + + +AG +SLFERL SL
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELG-PYSF-IN 318
H L VQYRM+P +S FP+ FY + +G ++ ++ P G P F N
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 319 IIGGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKK 376
G EE + S N +E +I+ KL++ V +Q IGV++PY Q I +
Sbjct: 688 Y--GREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQY 742
Query: 377 IGSEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRA 434
+ +KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA
Sbjct: 743 MQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRA 802
Query: 435 RHCLWILGNERTLISSESIWGALVCDAKARQCFFNADED 473
++ L ILGN R+L + ++W L+ + + C D
Sbjct: 803 KYGLVILGNPRSL-ARNTLWNHLLIHFREKGCLVEGTLD 840
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 384 (140.2 bits), Expect = 7.6e-33, P = 7.6e-33
Identities = 104/313 (33%), Positives = 157/313 (50%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINII 320
L VQYRMHP++S FP+ FY + +G + + + F +
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 321 GGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK--K 376
G EE S N E + V KI KL KA G+K IG+++PY Q + + +
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 814
Query: 377 IGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARH 436
K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 815 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 874
Query: 437 CLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIGKELVEIGAESLT 496
+ I+GN + L S + +W L+ K ++ + N+ ++ + K +
Sbjct: 875 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEGPLN-NLRESLMQFSKPRKLVNT---V 929
Query: 497 STNQRGKTTLCYD 509
+ R TT YD
Sbjct: 930 NPGARFMTTAMYD 942
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 381 (139.2 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 96/262 (36%), Positives = 140/262 (53%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 632 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 690
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINII 320
L VQYRMHP++S FP+ FY + +G + + + F +
Sbjct: 691 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 750
Query: 321 GGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK--K 376
G EE S N E + V KI KL KA G+K IG+++PY Q + + +
Sbjct: 751 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 807
Query: 377 IGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARH 436
K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 808 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 867
Query: 437 CLWILGNERTLISSESIWGALV 458
+ I+GN + L S + +W L+
Sbjct: 868 GVIIVGNPKAL-SKQPLWNHLL 888
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 381 (139.2 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 96/262 (36%), Positives = 140/262 (53%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 642 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 700
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINII 320
L VQYRMHP++S FP+ FY + +G + + + F +
Sbjct: 701 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 760
Query: 321 GGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK--K 376
G EE S N E + V KI KL KA G+K IG+++PY Q + + +
Sbjct: 761 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 817
Query: 377 IGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARH 436
K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 818 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 877
Query: 437 CLWILGNERTLISSESIWGALV 458
+ I+GN + L S + +W L+
Sbjct: 878 GVIIVGNPKAL-SKQPLWNHLL 898
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 381 (139.2 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 96/262 (36%), Positives = 140/262 (53%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 643 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 701
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINII 320
L VQYRMHP++S FP+ FY + +G + + + F +
Sbjct: 702 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 761
Query: 321 GGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK--K 376
G EE S N E + V KI KL KA G+K IG+++PY Q + + +
Sbjct: 762 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 818
Query: 377 IGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARH 436
K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 819 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 878
Query: 437 CLWILGNERTLISSESIWGALV 458
+ I+GN + L S + +W L+
Sbjct: 879 GVIIVGNPKAL-SKQPLWNHLL 899
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 381 (139.2 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 96/262 (36%), Positives = 140/262 (53%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 644 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 702
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINII 320
L VQYRMHP++S FP+ FY + +G + + + F +
Sbjct: 703 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 762
Query: 321 GGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK--K 376
G EE S N E + V KI KL KA G+K IG+++PY Q + + +
Sbjct: 763 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 819
Query: 377 IGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARH 436
K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 820 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 879
Query: 437 CLWILGNERTLISSESIWGALV 458
+ I+GN + L S + +W L+
Sbjct: 880 GVIIVGNPKAL-SKQPLWNHLL 900
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 381 (139.2 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 96/262 (36%), Positives = 140/262 (53%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 645 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 703
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINII 320
L VQYRMHP++S FP+ FY + +G + + + F +
Sbjct: 704 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 763
Query: 321 GGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK--K 376
G EE S N E + V KI KL KA G+K IG+++PY Q + + +
Sbjct: 764 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 820
Query: 377 IGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARH 436
K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 821 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 880
Query: 437 CLWILGNERTLISSESIWGALV 458
+ I+GN + L S + +W L+
Sbjct: 881 GVIIVGNPKAL-SKQPLWNHLL 901
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 378 (138.1 bits), Expect = 4.1e-32, P = 4.1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 613 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 671
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINII 320
L VQYRMHP++S FP+ FY + +G + + + F +
Sbjct: 672 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQWPQPDKPMFFYVT 731
Query: 321 GGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK--K 376
G EE S N E + V KI +L KA G+K IG+++PY Q + + +
Sbjct: 732 QGQEEIASSGTSYLNRTEAANVEKITTRLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 788
Query: 377 IGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARH 436
K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 789 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 848
Query: 437 CLWILGNERTLISSESIWGALV 458
+ I+GN + L S + +W L+
Sbjct: 849 GVIIVGNPKAL-SKQPLWNHLL 869
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 370 (135.3 bits), Expect = 4.4e-31, P = 4.4e-31
Identities = 107/326 (32%), Positives = 169/326 (51%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY-LPGTELGPYSFINI 319
L VQYRMHP +S FP+ FY + +G + + + + P E P F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPER-PMFFL-V 730
Query: 320 IGGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ-AVAIR-K 375
G EE S N E + V KI + KA + +Q IG+++PY Q A ++
Sbjct: 731 TQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYM 787
Query: 376 KIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRAR 435
+ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA+
Sbjct: 788 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAK 847
Query: 436 HCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIGK--ELVE---I 490
+ I+GN + L + + +W L+ K R+ + N+ ++ + K +LV I
Sbjct: 848 FGIIIVGNPKVL-AKQQLWNHLLNFYKDRKVLVEGSLN-NLKESLIHFQKPKKLVNSMNI 905
Query: 491 GAESLTSTNQRGKTTLC----YDKDG 512
GA +++ K + YD+ G
Sbjct: 906 GAHFMSTIIADAKEVMVPGSIYDRSG 931
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 362 (132.5 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 114/374 (30%), Positives = 184/374 (49%)
Query: 177 ASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 236
A + T SS+ +I+ L IDE+ Q E E + + + G+ VL+GD CQL
Sbjct: 584 ADVICCTCSSAADARLSKIRTRTVL-IDESTQATEPEILVSI-MRGVRQLVLVGDHCQLG 641
Query: 237 AMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANV 296
+V K + AG +SLFERL L L VQYRMHP +S FP+ FY + +G
Sbjct: 642 PVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTE 701
Query: 297 KSK---SYEKHYLPGTELGPYSFINIIGGSEEFIYH--SCRNMVEVSVVIKILQKLYKAW 351
+ + H+ + P F + GSEE S N E + V K++ KL KA
Sbjct: 702 NDRHMTGVDWHWPKPNK--PAFFWHC-SGSEELSASGTSFLNRTEAANVEKLVSKLIKAG 758
Query: 352 VGSKQKVSIGVVSPYTAQAVAIRKKIGSE--YENKDGFTVKVKSIDGFQGGEEDIIIIST 409
V Q IGV++ Y Q I + ++ +K V++ S+D FQG E+D II++
Sbjct: 759 VQPHQ---IGVITSYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTC 815
Query: 410 VRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFN 469
VR N IGF+S P+R+NVA+TRA++ L ++GN + L + +W L+ K+++ +
Sbjct: 816 VRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVL-ARHDLWHELINHYKSKEMLYE 874
Query: 470 ADEDRNVAKARLDIGKELVEIGAESLTSTNQRGKTTLCYDKDGETYREERSTATDSEAAA 529
+ + L + K + + N+ G + Y T+ E +S S+
Sbjct: 875 GPINA-LKPLNLALPKATIRTKNNIAGNANRFGIKRMQY-----TFNEYKSN-DPSQPRL 927
Query: 530 DPMFNSTLNRLTLT 543
P ++++ N L+++
Sbjct: 928 PPTYSNSQNLLSMS 941
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 362 (132.5 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 120/392 (30%), Positives = 202/392 (51%)
Query: 73 THLPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEELEKLFSHSVDEGISS-AFVGK 131
TH+ + I +S+ + K +L + + +N+V E L+K +V G S + +
Sbjct: 1805 THVACAII--DSWHKQNSNKKILAVADSNVAANNLV-EGLKKRNIQAVRVGAGSDSDFHE 1861
Query: 132 RYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLH 191
+++ H R + L + +N N E + + L LE K+ ++ +T S H
Sbjct: 1862 EAIMEFH-RYKDLLKLRKN--NMQKEAKV--MKALLFLE--AVKKYNVVIATCVGSG--H 1912
Query: 192 SV-EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFG 250
+ + + ++IDE AQ E + IPL N+ VLIGD QLP + S + + G
Sbjct: 1913 EIFDNEKFERVIIDECAQSIEPSNLIPLGHY-CNNLVLIGDHKQLPPTIISPDAIKLGLD 1971
Query: 251 RSLFERLTSLNHSK-HLLNVQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKHYLP 307
+SL ER + HLLN Q RMH SI +FPN FY N+ L ANV +++ K +L
Sbjct: 1972 KSLLERFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNK-LKTANVTEENRPIIKGFLW 2030
Query: 308 GTELGPYSFINI-IG--GSE-EFIYHSCR-NMVEVSVVIKILQKLYKAWVGSKQKVSIGV 362
+FI++ IG GS+ E Y + + N+ E+ +I +L+ + G IG+
Sbjct: 2031 PNPKCRLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINE--GCVSVDEIGI 2088
Query: 363 VSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFIS 422
++ Y AQ + ++K + + + +++ SIDGFQG E+D+I+ S VR NA +GF+
Sbjct: 2089 LTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLR 2148
Query: 423 KPQRVNVALTRARHCLWILGNERTLISSESIW 454
+R+NV LTRA+ + + G++ TL + + W
Sbjct: 2149 DARRLNVMLTRAKRGVILFGDQFTLANDPANW 2180
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 362 (132.5 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 120/392 (30%), Positives = 202/392 (51%)
Query: 73 THLPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEELEKLFSHSVDEGISS-AFVGK 131
TH+ + I +S+ + K +L + + +N+V E L+K +V G S + +
Sbjct: 1805 THVACAII--DSWHKQNSNKKILAVADSNVAANNLV-EGLKKRNIQAVRVGAGSDSDFHE 1861
Query: 132 RYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLH 191
+++ H R + L + +N N E + + L LE K+ ++ +T S H
Sbjct: 1862 EAIMEFH-RYKDLLKLRKN--NMQKEAKV--MKALLFLE--AVKKYNVVIATCVGSG--H 1912
Query: 192 SV-EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFG 250
+ + + ++IDE AQ E + IPL N+ VLIGD QLP + S + + G
Sbjct: 1913 EIFDNEKFERVIIDECAQSIEPSNLIPLGHY-CNNLVLIGDHKQLPPTIISPDAIKLGLD 1971
Query: 251 RSLFERLTSLNHSK-HLLNVQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKHYLP 307
+SL ER + HLLN Q RMH SI +FPN FY N+ L ANV +++ K +L
Sbjct: 1972 KSLLERFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNK-LKTANVTEENRPIIKGFLW 2030
Query: 308 GTELGPYSFINI-IG--GSE-EFIYHSCR-NMVEVSVVIKILQKLYKAWVGSKQKVSIGV 362
+FI++ IG GS+ E Y + + N+ E+ +I +L+ + G IG+
Sbjct: 2031 PNPKCRLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINE--GCVSVDEIGI 2088
Query: 363 VSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFIS 422
++ Y AQ + ++K + + + +++ SIDGFQG E+D+I+ S VR NA +GF+
Sbjct: 2089 LTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLR 2148
Query: 423 KPQRVNVALTRARHCLWILGNERTLISSESIW 454
+R+NV LTRA+ + + G++ TL + + W
Sbjct: 2149 DARRLNVMLTRAKRGVILFGDQFTLANDPANW 2180
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 365 (133.5 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 96/280 (34%), Positives = 153/280 (54%)
Query: 197 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFER 256
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2197 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2255
Query: 257 LTSL--NHSKH---------LLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 305
L ++ +H L VQYRMHP I LFP+ Y + ++ +
Sbjct: 2256 FYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDW 2315
Query: 306 LPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSP 365
P PY ++ GSE S N+ E+ +V++I+ KL K +IG+++
Sbjct: 2316 -P---FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2370
Query: 366 YTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNA-GGSIGFISKP 424
Y AQ I+K + E++ K +V ++DGFQG ++D +I++ VR NA GSIGF++
Sbjct: 2371 YKAQKTMIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASL 2428
Query: 425 QRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKAR 464
QR+NV +TRA++ L+ILG+ RTL+ ++ W L+ DA+ R
Sbjct: 2429 QRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2467
Score = 44 (20.5 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 23/122 (18%), Positives = 50/122 (40%)
Query: 100 TLLFKDNVVSEELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELN 159
T L D+ ++ LEK+ + + D +GK ++ ++ E + L ++ +
Sbjct: 754 THLLTDSS-TDSLEKMSTSNEDFSFKDDVLGKTSKTKIKSQKDEICAKLSHVIKKQHRKS 812
Query: 160 LPCTTSKLLLEDFCFKRASLFFSTASSSYK-----LHSVEIKPLNFLVIDEAAQLKESES 214
L E+ F+S S + +HS+ + P N ++ D+ + K +S
Sbjct: 813 TFIDNIGNLEENLTVSNVDNFYSRKESGDQKGDSFMHSLSLDP-NGILDDKNGEQKSHKS 871
Query: 215 TI 216
+
Sbjct: 872 LL 873
Score = 40 (19.1 bits), Expect = 4.0e-29, Sum P(2) = 4.0e-29
Identities = 11/48 (22%), Positives = 17/48 (35%)
Query: 20 EEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRAVVPLRNC 67
+E + + Q+ C K + KE+ K PL NC
Sbjct: 2014 DENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNC 2061
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 368 (134.6 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 106/306 (34%), Positives = 166/306 (54%)
Query: 195 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLF 254
+ P + +++DEA Q E E+ IPL + N VL+GD QLP + S + E G+G+SL
Sbjct: 2195 LDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLM 2253
Query: 255 ERL-------TSLNHSKHL----LNVQYRMHPSISLFPNLQFYRNQI-LDGANVKSKSYE 302
RL N + L L VQYRMHP I LFP+ Y + D A +++
Sbjct: 2254 ARLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSS 2313
Query: 303 KHYLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQ--KLYKAWVGSKQKVSI 360
+ P PY ++ G EE S N EV +V++I++ K + +G ++ I
Sbjct: 2314 EW--P---FQPYLVFDVGDGHEERDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRR---I 2365
Query: 361 GVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAG-GSIG 419
G+++PY+AQ I++++ ++N +V ++D FQG E+D II++ VR N+ GSIG
Sbjct: 2366 GIITPYSAQKKKIQEELDRVFKNNS--PGEVDTVDAFQGREKDCIIVTCVRANSSKGSIG 2423
Query: 420 FISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKA 479
F++ QR+NV +TRAR L+ILG +TL+ ++ W L+ DA+ R D++ K
Sbjct: 2424 FLASLQRLNVTITRARFSLFILGRLKTLMENKD-WNKLIQDAQRRGAIIKTS-DKSYKKD 2481
Query: 480 RLDIGK 485
L I K
Sbjct: 2482 ALKILK 2487
Score = 41 (19.5 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 5 LEDCVSQYHIYVEKLEEREDCNVNQSEEKEC 35
LEDC SQY + +++ Q +++C
Sbjct: 1087 LEDCDSQYFEFETEIDVFSVWQDTQEYKQDC 1117
Score = 39 (18.8 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 53 VKERFKRAVVPLRN--CIFIFCTHLPKSYISENSFQ 86
++ R ++A+ P R C +++P+ YIS N Q
Sbjct: 1654 LRPRSEKAI-PTRKQTCRTPSSSNIPQPYISNNVLQ 1688
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 352 (129.0 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 100/269 (37%), Positives = 142/269 (52%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDEA Q E E IPL L G VL+GD QL +V +K A +SLFERL L
Sbjct: 561 VLIDEATQASEPECMIPLVL-GAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFERLIIL 619
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY-LPGTEL-GPYSFIN 318
+S L VQYRMHP +S FP+ FY + +G S+ +H P + P F
Sbjct: 620 GNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTT-SERIARHVDFPWIQPDSPLMFYA 678
Query: 319 IIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKI 377
G E S N E S KI+ ++ V +Q IG+V+PY Q I + +
Sbjct: 679 NFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQ---IGIVTPYDGQRSYIVQYM 735
Query: 378 GSEYE-NKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRAR 435
+ KD + V+V S+D FQG E+D II+S VR + IGF++ P+R+NVALTRA+
Sbjct: 736 QNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRAK 795
Query: 436 HCLWILGNERTLISSESIWGALVCDAKAR 464
+ + +LGN + L + ++W V K +
Sbjct: 796 YGVIVLGNPKVL-AKHALWYHFVLHCKEK 823
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 356 (130.4 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 102/312 (32%), Positives = 162/312 (51%)
Query: 197 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFER 256
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 257 LTSL--NHSKH---------LLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 305
L + +H L VQYRMHP I LFP+ Y + ++ +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDW 2292
Query: 306 LPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSP 365
P PY ++ GSE S N+ E+ +V++I+ KL K +IG+++
Sbjct: 2293 -P---FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGIITH 2347
Query: 366 YTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNA-GGSIGFISKP 424
Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2348 YKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASL 2405
Query: 425 QRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIG 484
QR+NV +TRA++ L+ILG+ RTL+ ++ W L+ DA+ R D+N + I
Sbjct: 2406 QRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTC-DKNYRHDAVKIL 2463
Query: 485 KELVEIGAESLT 496
K L + SLT
Sbjct: 2464 K-LKPVLQRSLT 2474
Score = 40 (19.1 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 8 CVSQYHI--YVEKLEEREDCNVNQSEEKECRKETEGSKGECKPF 49
C+ + H +V + +E+ N + E+ E + E S +C F
Sbjct: 1040 CLEREHPEQHVSTVNSKEEKNPVKEEKTETLFQFEESDSQCFEF 1083
Score = 40 (19.1 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 11/48 (22%), Positives = 17/48 (35%)
Query: 20 EEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRAVVPLRNC 67
+E + + Q+ C K + KE+ K PL NC
Sbjct: 1991 DENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNC 2038
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 351 (128.6 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 97/282 (34%), Positives = 155/282 (54%)
Query: 197 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFER 256
P + +++DEA Q E E+ PL + N VL+GD QLP V S + E G+ +S+ R
Sbjct: 2151 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 2209
Query: 257 LTSL---NHSKHL--------LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 305
L N +++ L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2210 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNK------NLKTNRLTETI 2263
Query: 306 LPGTE--LGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVV 363
+E PY ++ GSE+ S N+ E+ +V++I+ KL K +IG++
Sbjct: 2264 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2322
Query: 364 SPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNA-GGSIGFIS 422
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR +A GSIGF++
Sbjct: 2323 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2380
Query: 423 KPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKAR 464
QR+NV +TRA++ L+ILG+ RTL+ ++ W L+ DA+ R
Sbjct: 2381 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2421
Score = 45 (20.9 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 130 GKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLL 168
G R +L QR EC+ LR+ ++ + P T KL+
Sbjct: 1281 GPRKAFELSQRSLECIVQLRDHGKTVGVVEAPKKT-KLI 1318
Score = 41 (19.5 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 5 LEDCVSQYHIYVEK-LEEREDCNVNQSEEKECRKETE 40
+E + Q + E E+ D VN S EK+ KE E
Sbjct: 1016 IEGNIEQSKVSRENDCSEQHDLVVNTSVEKKLVKEEE 1052
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(2) = 5.0e-27
Identities = 11/48 (22%), Positives = 17/48 (35%)
Query: 20 EEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRAVVPLRNC 67
+E + + Q+ C K + KE+ K PL NC
Sbjct: 1968 DENFNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNC 2015
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 343 (125.8 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 93/307 (30%), Positives = 158/307 (51%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVASKISDEAGFGRSLFERLTS 259
+V+DE +Q+ E S +P+ +L+GD QL P + S + E G ++LF+RL
Sbjct: 727 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHENGLEQTLFDRLCL 786
Query: 260 LNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI 319
+ H LL QYR HP+IS N FY ++DG + + +LP F NI
Sbjct: 787 MGHKPVLLRTQYRCHPAISDISNDLFYEGNLVDGISETERGPLLEWLP-----TLCFYNI 841
Query: 320 IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGS 379
G + +S N+ E + +K++Q L + + IGV++ Y +Q + + +
Sbjct: 842 KGPEQIERDNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 898
Query: 380 -EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCL 438
+++N D V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 899 VDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 955
Query: 439 WILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLD-IGKELVEIGAESLTS 497
I+GN L + +WG ++ + R+ + + + + +L+ + KE E AE
Sbjct: 956 LIVGNLACLRKNR-LWGRVIQHCEGRR---DGLQHASQCEPQLNHLLKEYFEKRAEEKQK 1011
Query: 498 TNQRGKT 504
+++ K+
Sbjct: 1012 KSEKDKS 1018
Score = 38 (18.4 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 145 LSVLRNLWNSLDELNLPCTTSKLLLEDFCF---KRASL--F----FSTASSSYKLHSVEI 195
L+ L+N+ + + LP T L + KR + F FS ++ ++L S+E
Sbjct: 463 LTTLKNIQDYFNPATLPLTQYLLTMSSSTIVSNKRVNKRKFIPPAFSNINTKFELLSLEA 522
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLA 221
+ +A L + ++T +Q+A
Sbjct: 523 TLQLASELIQAHNLNKDQATALIQIA 548
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 335 (123.0 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 83/267 (31%), Positives = 141/267 (52%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMV-ASKISDEAGFGRSLFERLTS 259
+V+DE +Q+ E S +P+ +L+GD QLP + S + E G ++LF+RL
Sbjct: 629 VVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 688
Query: 260 LNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI 319
+ H LL QYR HP+IS N FY +++G + +S +LP F N+
Sbjct: 689 MGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP-----TLCFYNV 743
Query: 320 IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGS 379
G + +S N+ E + +K++Q L + + IGV++ Y +Q + + +
Sbjct: 744 KGLEQIERGNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 800
Query: 380 -EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCL 438
++++ + V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 801 MDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 857
Query: 439 WILGNERTLISSESIWGALVCDAKARQ 465
I+GN L + +WG ++ + R+
Sbjct: 858 LIVGNLACLRKNR-LWGRVIQHCEGRE 883
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 341 (125.1 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 84/267 (31%), Positives = 142/267 (53%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMV-ASKISDEAGFGRSLFERLTS 259
+V+DE +Q+ E S +P+ +L+GD QLP + S + E G ++LF+RL
Sbjct: 628 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 687
Query: 260 LNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI 319
+ H LL QYR HP+IS N FY+ +++G +S +LP F N+
Sbjct: 688 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFYNV 742
Query: 320 IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGS 379
G + +S N+ E + +K++Q L + + IGV++ Y +Q + + +
Sbjct: 743 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 799
Query: 380 -EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCL 438
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 800 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 856
Query: 439 WILGNERTLISSESIWGALVCDAKARQ 465
I+GN L ++ +WG ++ + R+
Sbjct: 857 LIVGNLACLRKNQ-LWGRVIQHCEGRE 882
Score = 37 (18.1 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 6 EDCVSQYHIYVEKLEEREDCNVNQSEEKECR 36
ED +YV K E+ N++ K+ R
Sbjct: 576 EDLTPTERVYVRKSIEQHKLGTNRTLLKQVR 606
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 352 (129.0 bits), Expect = 3.7e-27, Sum P(2) = 3.7e-27
Identities = 103/312 (33%), Positives = 162/312 (51%)
Query: 197 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFER 256
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2150 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2208
Query: 257 LTSL---NHSKHL--------LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 305
L N +++ L +QYRMHP I LFP+ Y + +S +
Sbjct: 2209 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTESIRCSSEW 2268
Query: 306 LPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSP 365
P PY ++ GSE S N+ E+ +V++I+ KL K +IG+++
Sbjct: 2269 -P---FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITH 2323
Query: 366 YTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNA-GGSIGFISKP 424
Y AQ I+K + E++ K +V ++D FQG ++D II++ VR +A GSIGF++
Sbjct: 2324 YKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASL 2381
Query: 425 QRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIG 484
QR+NV +TRA++ L+ILG+ RTL+ ++ W L+ DA+ R D N + I
Sbjct: 2382 QRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTS-DPNYRHDAMKIL 2439
Query: 485 KELVEIGAESLT 496
K L + SLT
Sbjct: 2440 K-LKPVLQRSLT 2450
Score = 39 (18.8 bits), Expect = 7.3e-27, Sum P(3) = 7.3e-27
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 102 LFKDNVVSEELEKLFSHSVDE 122
LFK + SEEL+ S S DE
Sbjct: 857 LFKKEIKSEELDN--SSSDDE 875
Score = 39 (18.8 bits), Expect = 7.3e-27, Sum P(3) = 7.3e-27
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 132 RYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLL 168
R +L QR EC+ LR+ ++ ++ P +KL+
Sbjct: 1282 RKAFELSQRSLECIVQLRDHGKTVGVVDAP-KKAKLI 1317
Score = 37 (18.1 bits), Expect = 3.7e-27, Sum P(2) = 3.7e-27
Identities = 11/48 (22%), Positives = 17/48 (35%)
Query: 20 EEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRAVVPLRNC 67
+E + + Q+ C K + KE+ K PL NC
Sbjct: 1967 DENFNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNC 2014
Score = 37 (18.1 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 6 EDCVSQYHIYVEK-LEEREDCNVNQSEEKECRKETE 40
E+ + Q + K E VN S EK+ KE E
Sbjct: 1019 EENIKQSKACIGKDCSEHRSLAVNASVEKQLVKEEE 1054
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 350 (128.3 bits), Expect = 4.1e-27, Sum P(2) = 4.1e-27
Identities = 94/280 (33%), Positives = 150/280 (53%)
Query: 197 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFER 256
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+ R
Sbjct: 2168 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMAR 2226
Query: 257 LTSL--NHSKH---------LLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 305
L + +H L VQYRMHP I LFP+ Y + + ++ +
Sbjct: 2227 FYKLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNSLTEASRCSSDW 2286
Query: 306 LPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSP 365
P PY ++ GSE S N+ E+ +V++I+ KL K +IG+++
Sbjct: 2287 -P---FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2341
Query: 366 YTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAG-GSIGFISKP 424
Y AQ I+K + E++ K +V ++DGFQG ++D +I++ VR GSIGF++
Sbjct: 2342 YKAQKTLIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASL 2399
Query: 425 QRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKAR 464
QR+NV +TRA++ L+ILG+ RTL ++ W L+ DA+ R
Sbjct: 2400 QRLNVTITRAKYSLFILGHLRTLRENDH-WNQLIEDAQKR 2438
Score = 39 (18.8 bits), Expect = 4.1e-27, Sum P(2) = 4.1e-27
Identities = 11/48 (22%), Positives = 17/48 (35%)
Query: 20 EEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRAVVPLRNC 67
+E + + Q+ C K + KE+ K PL NC
Sbjct: 1985 DENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKRNPLGNC 2032
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 329 (120.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 90/306 (29%), Positives = 156/306 (50%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMV-ASKISDEAGFGRSLFERLTS 259
+V+DE +Q+ E S +P+ +L+GD QLP + S + G ++LF+RL
Sbjct: 623 VVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCL 682
Query: 260 LNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI 319
+ H L QYR HP IS N FY +++G + + +S +LP F N+
Sbjct: 683 MGHKPIQLRTQYRCHPVISAIANDLFYEGNLVNGISERERSPVLEWLP-----TLCFYNV 737
Query: 320 IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGS 379
G + +S N+ E + +K+++ L + + IGV++ Y +Q I + +
Sbjct: 738 TGTEQVERENSFVNVAEAAFTLKLIRSLIASGLEGSM---IGVITLYKSQMYKICSLLSA 794
Query: 380 -EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCL 438
+ ++ D V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 795 VDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 851
Query: 439 WILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLD-IGKELVEIGAESLTS 497
I+G+ L ++ +WG ++ K R+ + + + + +LD + KE +E AE
Sbjct: 852 LIIGSLSCLRKNQ-LWGRVIQHCKGRE---DGLQHASQCEPQLDRLLKEYLEKQAEEKQK 907
Query: 498 TNQRGK 503
++ K
Sbjct: 908 KTEKEK 913
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 345 (126.5 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 102/312 (32%), Positives = 163/312 (52%)
Query: 197 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSL--- 253
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+
Sbjct: 2164 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2222
Query: 254 FERLT--SLNHSK--HL----LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 305
F +L S+ H+ L L +QYRMHP I LFP+ Y + ++ +
Sbjct: 2223 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTETSRCSSDW 2282
Query: 306 LPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSP 365
P PY ++ G E S N+ E+ +V++++ KL K +IG+++
Sbjct: 2283 -P---FQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELI-KLIKDKRRDVTFRNIGIITH 2337
Query: 366 YTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAG-GSIGFISKP 424
Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR NA GSIGF++
Sbjct: 2338 YKAQKTMIQKDLDKEFDRKGA--AEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASL 2395
Query: 425 QRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIG 484
QR+NV +TRA++ L+ILG+ RTL+ + W L+ DA+ R D+N + I
Sbjct: 2396 QRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTC-DKNYRHDAMKIL 2453
Query: 485 KELVEIGAESLT 496
K L + SLT
Sbjct: 2454 K-LKPLLQRSLT 2464
Score = 38 (18.4 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 101 LLFKDNVVSEELEKLFSHSVDE-GISSAFVGKRYLLQLHQRRSECLS 146
LL K V E+L+ LFS + I V + L+ L + S C++
Sbjct: 860 LLKKKEVKKEKLD-LFSTPENSCQIQECHVDSKDLVSLTEMTSICMT 905
Score = 38 (18.4 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 10/48 (20%), Positives = 17/48 (35%)
Query: 20 EEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKERFKRAVVPLRNC 67
+E + + Q+ C K + KE+ K P+ NC
Sbjct: 1981 DENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPMGNC 2028
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 327 (120.2 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 89/270 (32%), Positives = 141/270 (52%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMV-ASKISDEAGFGRSLFERLTS 259
+V+DE +Q+ E S +P+ VL+GD QLP + S+ E G ++LF+RL
Sbjct: 624 VVLDECSQMTEPTSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHEKGLEQTLFDRLCL 683
Query: 260 LNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI 319
+ H LL QYR HP+IS N FY ++DG + K +S +LP L YS
Sbjct: 684 MGHKTILLRTQYRCHPAISAIANELFYEGNLIDGVSEKERSPLLDWLP--TLCFYS---- 737
Query: 320 IGGSEEFIY-HSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIG 378
+ G E+ +S NM EV +K +Q L + + ++GV++ Y +Q ++ +
Sbjct: 738 VNGLEQIERDNSFYNMAEVHFTVKFIQALIASGIDGS---AVGVITFYKSQMYKLQNLLR 794
Query: 379 SEYENKDGFTVK---VKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRAR 435
S + + F VK V ++D FQG E++I+++S VR GF +R+NVALTRA+
Sbjct: 795 SIHS--EAFPVKAVQVSTVDAFQGAEKEIVVLSCVRTR---QTGFTDSEKRMNVALTRAK 849
Query: 436 HCLWILGNERTLISSESIWGALVCDAKARQ 465
L I+GN L S ++ ++ K R+
Sbjct: 850 RHLLIVGNLACL-SKNRLYERVINHCKGRE 878
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 341 (125.1 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 84/267 (31%), Positives = 142/267 (53%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMV-ASKISDEAGFGRSLFERLTS 259
+V+DE +Q+ E S +P+ +L+GD QLP + S + E G ++LF+RL
Sbjct: 1806 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1865
Query: 260 LNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI 319
+ H LL QYR HP+IS N FY+ +++G +S +LP F N+
Sbjct: 1866 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFYNV 1920
Query: 320 IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGS 379
G + +S N+ E + +K++Q L + + IGV++ Y +Q + + +
Sbjct: 1921 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 1977
Query: 380 -EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCL 438
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 1978 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 2034
Query: 439 WILGNERTLISSESIWGALVCDAKARQ 465
I+GN L ++ +WG ++ + R+
Sbjct: 2035 LIVGNLACLRKNQ-LWGRVIQHCEGRE 2060
Score = 38 (18.4 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 107 VVSEELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSK 166
++ +L+K H + SS LL +Q EC+++ ++ + + L P
Sbjct: 715 ILGSDLDKNDEHVLPSTSSSD--NSVQLLNTNQNHYECIALDKSNTHISNSLFYPLGKKH 772
Query: 167 LLLED 171
L+ +D
Sbjct: 773 LISKD 777
Score = 37 (18.1 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 6 EDCVSQYHIYVEKLEEREDCNVNQSEEKECR 36
ED +YV K E+ N++ K+ R
Sbjct: 1754 EDLTPTERVYVRKSIEQHKLGTNRTLLKQVR 1784
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 196 (74.1 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
Identities = 62/201 (30%), Positives = 99/201 (49%)
Query: 197 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFER 256
P + +++DEA Q E E+ PL + N VL+GD QLP V S + E G+ +S+ R
Sbjct: 23 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 81
Query: 257 LTSL---NHSKHL--------LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 305
L N +++ L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 82 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNK------NLKTNRLTETI 135
Query: 306 LPGTE--LGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVV 363
+E PY ++ GSE+ S N+ E+ +V++I+ KL K +IG++
Sbjct: 136 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 194
Query: 364 SPYTAQAVAIRKKIGSEYENK 384
+ Y AQ I+K + E++ K
Sbjct: 195 THYKAQKTMIQKDLEKEFDKK 215
Score = 169 (64.5 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
Identities = 39/89 (43%), Positives = 60/89 (67%)
Query: 379 SEYENKDGFT--VKVKSIDGFQGGEEDIIIISTVRCNA-GGSIGFISKPQRVNVALTRAR 435
S EN T +V ++D FQG ++D II++ VR +A GSIGF++ QR+NV +TRA+
Sbjct: 261 SSLENGATHTGPAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAK 320
Query: 436 HCLWILGNERTLISSESIWGALVCDAKAR 464
+ L+ILG+ RTL+ ++ W L+ DA+ R
Sbjct: 321 YSLFILGHLRTLMENQH-WYELIQDAQKR 348
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 304 (112.1 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 93/295 (31%), Positives = 152/295 (51%)
Query: 166 KLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 225
+L + D K A + +T + + ++ + + ++IDE AQ E I L L G +
Sbjct: 333 QLAVSDV-IKNADVILTTLTGALT-RKLDNRTFDLVIIDEGAQALEVACWIAL-LKG-SR 388
Query: 226 AVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL--NHSKHLLNVQYRMHPSISLFPNL 283
+L GD QLP + S ++ G GR+LFERL L + K +L VQYRMH I + +
Sbjct: 389 CILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSK 448
Query: 284 QFYRNQILDGANVKSK---SYEKHYLPGTELGPYSFINIIG-GSEEFI--YHSCRNMVEV 337
+ Y N+I ++V S E + ++ G EE S N E
Sbjct: 449 ELYDNKITAHSSVASHMLFDLENVTKSSSTEATLLLVDTAGCDMEEKKDEEESTYNEGEA 508
Query: 338 SVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGF 397
V + ++L ++ V Q IG+++PY AQ + +R G E + KD +++ ++DGF
Sbjct: 509 EVAMAHAKRLMESGV---QPSDIGIITPYAAQVMLLRILRGKEEKLKD---MEISTVDGF 562
Query: 398 QGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSES 452
QG E++ IIIS VR N+ +GF+ +R+NVA+TR+R I+ + T +SS++
Sbjct: 563 QGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCCIVCDTET-VSSDA 616
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 212 (79.7 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 63/201 (31%), Positives = 103/201 (51%)
Query: 176 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 235
++ + F+T ++ IK +++DEA Q E+ + +PL L GI + V +GDE QL
Sbjct: 792 QSQIIFTTNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQL 851
Query: 236 PAMVASKISDEAGFGRSLFERLTSLNHSKH--LLNVQYRMHPSISLFPNLQFYRNQILDG 293
S S+ SLFER+ S K+ +L+ QYRMHP IS FP + Y ++ DG
Sbjct: 852 -----SSFSNIPQLETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDG 906
Query: 294 ANVKSKSYE--KH--YLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYK 349
+ K++ +H + +LGP S + + + + N E ++KI+Q L
Sbjct: 907 VTDEQKAWPGVQHPLFFYQCDLGPESRVR--STQRDIVGFTYENKHECVEIVKIIQILM- 963
Query: 350 AWVGSKQKVS-IGVVSPYTAQ 369
+ K + IGV++PY+AQ
Sbjct: 964 --LDKKVPLEEIGVITPYSAQ 982
Score = 150 (57.9 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 391 VKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISS 450
V ++D FQG E+ II S VR N IGF+ +R+NVALTRA+H L ++GN+ L
Sbjct: 1038 VATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKG 1097
Query: 451 ESIWGALVCDAKARQCFF 468
+ +W + + ++ F
Sbjct: 1098 DPLWKDYITYLEEQEVIF 1115
Score = 41 (19.5 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 144 CLSVLRNLWNS-LDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKL 190
C + +W + EL++ LL+E F + SL SS +KL
Sbjct: 554 CTQDEQKVWYIFIKELSIQRGKYVLLVELFSWNNLSLPTKNGSSQFKL 601
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 293 GANVKSKSYEKHYLP 307
G K++S +KH LP
Sbjct: 304 GGKGKNESVDKHQLP 318
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 295 (108.9 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 108/353 (30%), Positives = 164/353 (46%)
Query: 120 VDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELN--LPCTTSKLLLEDFCFKRA 177
+ + I AFV R Q RR + ++WN + L L +LE
Sbjct: 295 IRKDIDQAFVNNR---QTQDRREKS-----SVWNEVKLLRKELKEREEAAMLESLTSAAV 346
Query: 178 SLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 236
L +T ASS L + + +VIDE AQ E+ IPL A +L GD QLP
Sbjct: 347 VLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKA--RKCILAGDHKQLP 404
Query: 237 AMVASKISDEAGFGRSLFERLTSLNHSK--HLLNVQYRMHPSISLFPNLQFYRNQILDGA 294
S + AG SL ERL + ++ L VQYRMH +I + + Y Q+
Sbjct: 405 PTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHP 464
Query: 295 NVKSKSYEKHYLPGT----ELG-PYSFINIIGGS----EEFIYHSCRNMVEVSVVIKILQ 345
+V LPG E G P ++ G E+ S N EV +V +Q
Sbjct: 465 SVAGHLLRD--LPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQ 522
Query: 346 KLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDII 405
L A V Q I V++PY Q +R+ + + +++KS+DGFQG E++ +
Sbjct: 523 ALVDAGV---QASDIAVITPYNLQVDLLRQSLAHRHPE-----LEIKSVDGFQGREKEAV 574
Query: 406 IISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALV 458
++S VR N G +GF+++ +R+NVA+TRAR + ++ + RT +S+ + LV
Sbjct: 575 VLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLKTLV 626
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 295 (108.9 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 108/353 (30%), Positives = 164/353 (46%)
Query: 120 VDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELN--LPCTTSKLLLEDFCFKRA 177
+ + I AFV R Q RR + ++WN + L L +LE
Sbjct: 295 IRKDIDQAFVNNR---QTQDRREKS-----SVWNEVKLLRKELKEREEAAMLESLTSAAV 346
Query: 178 SLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 236
L +T ASS L + + +VIDE AQ E+ IPL A +L GD QLP
Sbjct: 347 VLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKA--RKCILAGDHKQLP 404
Query: 237 AMVASKISDEAGFGRSLFERLTSLNHSK--HLLNVQYRMHPSISLFPNLQFYRNQILDGA 294
S + AG SL ERL + ++ L VQYRMH +I + + Y Q+
Sbjct: 405 PTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHP 464
Query: 295 NVKSKSYEKHYLPGT----ELG-PYSFINIIGGS----EEFIYHSCRNMVEVSVVIKILQ 345
+V LPG E G P ++ G E+ S N EV +V +Q
Sbjct: 465 SVAGHLLRD--LPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQ 522
Query: 346 KLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDII 405
L A V Q I V++PY Q +R+ + + +++KS+DGFQG E++ +
Sbjct: 523 ALVDAGV---QASDIAVITPYNLQVDLLRQSLAHRHPE-----LEIKSVDGFQGREKEAV 574
Query: 406 IISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALV 458
++S VR N G +GF+++ +R+NVA+TRAR + ++ + RT +S+ + LV
Sbjct: 575 VLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLKTLV 626
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 291 (107.5 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 94/318 (29%), Positives = 160/318 (50%)
Query: 149 RNLWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQ 208
R + +S+ EL + + L +++ ST + + I +++VIDE AQ
Sbjct: 369 RVIQSSIKELRIDLKNREKSLIQQVINDSNVILSTNTGASDSSLKGIDNFDWVVIDECAQ 428
Query: 209 LKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL--NHSKHL 266
E+ IP+Q N +L GD QLP + S + + G +LFER+ + L
Sbjct: 429 ALEASCWIPIQKG--NKLLLAGDHQQLPPTIHSMEAAKMGLSITLFERIIKQYGDQVSRL 486
Query: 267 LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPG-----TELGPYSFINIIG 321
LNVQYRM+ I + +++FY ++++ +V + P T P I+ G
Sbjct: 487 LNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNTLTTTCPLLMIDTSG 546
Query: 322 ----GSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKI 377
S++ S N EV VV + ++KL + G K IGV++PY Q ++ +
Sbjct: 547 CDMEESQDDEGESKFNNGEVIVVKRHIEKLIEC--GVKPN-DIGVITPYNGQVKLLKSYL 603
Query: 378 GSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN--AGGSIGFISKPQRVNVALTRAR 435
+Y + +++ ++DGFQG E+D+IIIS VR N A +GF+++ +R NVA+TRAR
Sbjct: 604 SKKYSS-----MEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLTEDRRTNVAITRAR 658
Query: 436 HCLWILGNERTLISSESI 453
+ ++ + T+ S E +
Sbjct: 659 KHVVVVCDTDTISSHEPL 676
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 286 (105.7 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 91/272 (33%), Positives = 138/272 (50%)
Query: 192 SVEIKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGF 249
S ++K F ++IDEA+Q E + IPL G+N +L GD QL V SK
Sbjct: 375 SRQLKGQRFDAVIIDEASQALEPQCWIPL--LGMNKVILAGDHMQLSPNVQSKRPYI--- 429
Query: 250 GRSLFERLTSLNHS--KHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSY-EKHYL 306
S+FERL K LN+QYRMH IS FP+ FY ++++ VK + + +
Sbjct: 430 --SMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENV 487
Query: 307 PGTEL--GPYSFINIIGGSEE---------FIYHSCRNMVEVSVVIKILQKLYKAWVGSK 355
TEL P F + +G +E F S N E +V + L +A + +K
Sbjct: 488 EETELTDSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAK 547
Query: 356 QKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAG 415
I VV+PY AQ IR+ + + G V++ S+D QG E++ II S VR N
Sbjct: 548 D---IAVVTPYNAQVALIRQLL-----KEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDV 599
Query: 416 GSIGFISKPQRVNVALTRARHCLWILGNERTL 447
+GF+++ +R+NVA+TR + L ++G+ T+
Sbjct: 600 REVGFLAEKRRLNVAITRPKRHLCVIGDSNTV 631
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 287 (106.1 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 109/353 (30%), Positives = 168/353 (47%)
Query: 120 VDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLLLEDFCFKRASL 179
V + I AF K Q R LS ++ L L E T+ L AS+
Sbjct: 292 VRKDIDQAFA-KSKKAQDKGERGHFLSEIKALRKELKEREETAMTAALT-------HASV 343
Query: 180 FFSTASSSYKLHSVEIKPLNF---LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 236
+T + + +++ P N+ +VIDE AQ E+ IPL A +L GD QLP
Sbjct: 344 VLATNTGASSDGPLKLLPENYFDLVVIDECAQALEASCWIPLLKAP--KCILAGDHKQLP 401
Query: 237 AMVASKISDEAGFGRSLFERLTSLNHSK--HLLNVQYRMHPSISLFPNLQFYRNQILDGA 294
+ S + G SL ER+ K +L VQYRMH +I + + + Y ++
Sbjct: 402 PTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQYRMHEAIMQWASSEMYGGRLTAHP 461
Query: 295 NVKSKSYEKHYLPG---TELG--PYSFINIIG-GSEEFIYH---SCRNMVEVSVVIKILQ 345
+V + LPG TE P I+ G G E S N EV +V +Q
Sbjct: 462 SVAQHLLKD--LPGVTCTEETTIPLLLIDTAGCGLLELEVEDEQSKGNPGEVQLVGLHIQ 519
Query: 346 KLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDII 405
L A V ++ + VV+PY Q +R+ + Y +++KS+DGFQG E++ +
Sbjct: 520 ALVDAGVKARD---VAVVAPYNLQVDMLREHLCHRYPE-----LEIKSVDGFQGREKEAV 571
Query: 406 IISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALV 458
I+S VR N G +GF+++ +R+NVA+TRAR + I+ + RT + S++ G L+
Sbjct: 572 ILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIICDSRT-VGSQAFLGRLL 623
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 188 (71.2 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 62/189 (32%), Positives = 92/189 (48%)
Query: 195 IKPLN---FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGR 251
IK LN ++IDEA Q E + IPL L + VL+GD+ QL S I +
Sbjct: 798 IKSLNNVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCF--SLIPN---LSL 852
Query: 252 SLFER--LTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGT 309
SLFER L + H+L+ QYRMHP IS FP +FY + DG + ++ E G
Sbjct: 853 SLFERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSE-----GV 907
Query: 310 ELGPYSFINIIGGSEE-----FIY----HSCRNMVEVSVVIKILQKLYKAWVGSKQKVSI 360
P F + G + E F+ ++ N E+ + ++L+ L G K + I
Sbjct: 908 ISSPLYFWDTKGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIIT-KGVKPE-QI 965
Query: 361 GVVSPYTAQ 369
G+++PY+ Q
Sbjct: 966 GIITPYSGQ 974
Score = 153 (58.9 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 29/66 (43%), Positives = 47/66 (71%)
Query: 389 VKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLI 448
+ + SID FQG E+D +I+S VR N G IGF+ +R+NVALTRA++ L ++G+++ L
Sbjct: 1019 IMIASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQ 1078
Query: 449 SSESIW 454
+ + +W
Sbjct: 1079 NGDKLW 1084
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 234 (87.4 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 69/216 (31%), Positives = 111/216 (51%)
Query: 271 YRMHPSISLFPNLQFYRNQILDGAN-VKSKSY-EKHYLPGTELGPYSFINIIGGSE-EFI 327
YR HP+I PN FY N++ AN ++ +++ + +LP P F ++G E E
Sbjct: 748 YRSHPAILKIPNELFYENELQVFANQMEREAFCQWEHLPRKGF-PVVFHGVMGKDEREAN 806
Query: 328 YHSCRNMVEVSVVIKILQKLYKAWVGSK--QKVS---IGVVSPYTAQAVAIRKKIGSEYE 382
S N+ E+ V++ L L + G K K+ IG+++PY Q IRK + + E
Sbjct: 807 SPSFFNVTEIEVIVNYLNNLMQTQ-GKKGLPKLGPNDIGIIAPYRKQVEKIRKALNTVGE 865
Query: 383 NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGG-------SIGFISKPQRVNVALTRAR 435
K +KV S++ FQG E +II+STVR + +IGF+S +R NVA+TRA+
Sbjct: 866 LKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNEKRFNVAMTRAK 925
Query: 436 HCLWILGNERTLISSESIWGALVCDAKARQCFFNAD 471
L ++GN ++S + W + + Q + D
Sbjct: 926 GLLIVVGNP-VILSKDPTWQKFIQYCEQEQGYTGFD 960
Score = 102 (41.0 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 201 LVIDEAAQLKESESTIPLQLAGI-----NHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
+ IDEA Q E E I + AG+ VL GD QL ++ S ++ G G+SL E
Sbjct: 660 IFIDEAGQAVEPECIIGI--AGLLDPLKGQLVLAGDPQQLGPVLRSPLAQLHGLGQSLLE 717
Query: 256 RLTSLN---------HSKH-------LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL N +SK+ LL YR HP+I PN FY N++ AN
Sbjct: 718 RLMKRNALYQKSQDDNSKYDSRFVTKLLR-NYRSHPAILKIPNELFYENELQVFAN 772
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 285 (105.4 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 105/342 (30%), Positives = 164/342 (47%)
Query: 156 DELNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESE 213
DEL C K L R L ST S+ L++ + +F +++DEA Q E E
Sbjct: 501 DELIFKCPPLKALT------RYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPE 554
Query: 214 STIPLQLAGINHAVLI--GDECQLPAMVASKISDEAGFGRSLFERLTSLNH-----SKHL 266
+ I + + V++ GD QL ++ S+ ++ G G+S ERL ++ ++
Sbjct: 555 NMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYV 614
Query: 267 LNV--QYRMHPSISLFPNLQFYRNQILDGA-NVKSKSYEKHYLPGTELGPYSFINIIGGS 323
+ YR HP I P+ FY +++ + S ++LP E P F I G
Sbjct: 615 TKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEF-PMVFYGIQGCD 673
Query: 324 E-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYE 382
E E S N +E+S VI+ +++L Q+ IGV++PY Q + I++ + +
Sbjct: 674 EREGNNPSWFNRIEISKVIETIKRLTAN--DCVQEEDIGVITPYRQQVMKIKEVL----D 727
Query: 383 NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGS-------IGFISKPQRVNVALTRAR 435
D VKV S++ FQG E+ +IIISTVR + +GF+S P+R NVA+TRA
Sbjct: 728 RLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAI 787
Query: 436 HCLWILGNERTLISSESIWGALV--C-DAKARQ-CFFNADED 473
L I+GN +I + W L+ C D A Q C E+
Sbjct: 788 SLLVIIGNPH-IICKDMNWNKLLWRCVDNNAYQGCGLPEQEE 828
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 283 (104.7 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 95/303 (31%), Positives = 148/303 (48%)
Query: 168 LLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 226
+LE R L + ASS L + + +VIDE AQ E+ +PL A
Sbjct: 335 MLESLTAARVVLATNAGASSDGPLKLLPDGHFDVVVIDECAQALEASCWVPLLKA--RKC 392
Query: 227 VLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSK--HLLNVQYRMHPSISLFPNLQ 284
+L GD QLP + S + AG SL ERL + +L VQYRMH +I+ + +
Sbjct: 393 ILAGDHKQLPPTIISHKAALAGLALSLMERLVEERGAGVLRMLTVQYRMHQAIAQWASEA 452
Query: 285 FYRNQILDGANVKSKSYEKHYLPGT----ELG-PYSFINIIGGS----EEFIYHSCRNMV 335
Y ++ A+V LPG E G P ++ G EE S N
Sbjct: 453 LYHGRLTAHASVAGHLLRD--LPGVAATEETGIPLLLVDTAGCGLFELEEEDEQSKGNPG 510
Query: 336 EVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSID 395
EV +V +Q L A V + + V++PY Q +R+ + + +++KS+D
Sbjct: 511 EVRLVRLHVQALVDAGVPAGD---VAVITPYNLQVDLLRQSLAQRHPE-----LEIKSVD 562
Query: 396 GFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWG 455
GFQG E++ +I+S VR N G +GF+++ +R+NVA+TRAR + ++ + RT +S+ +
Sbjct: 563 GFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLK 621
Query: 456 ALV 458
LV
Sbjct: 622 TLV 624
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 282 (104.3 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 96/303 (31%), Positives = 147/303 (48%)
Query: 168 LLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 226
+LE L +T AS+ L + + +VIDE AQ E+ IPL A
Sbjct: 335 MLESLAAASVVLATNTGASADGPLKLLPDSHFDMVVIDECAQALEASCWIPLLKA--RKC 392
Query: 227 VLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHL--LNVQYRMHPSISLFPNLQ 284
+L GD QLP + S + AG SL ERL + + L L VQYRMH +I+ + +
Sbjct: 393 ILAGDHKQLPPTIVSHKAALAGLSLSLMERLAERHGAGALRMLTVQYRMHQAIARWASEA 452
Query: 285 FYRNQILDGANVKSKSYEKHYLPGT----ELG-PYSFINIIGGS----EEFIYHSCRNMV 335
Y Q+ +V LPG E G P ++ G EE S N
Sbjct: 453 LYHGQLTAHPSVAGHLLRD--LPGVAATEETGVPLLLVDTAGCGLLELEEDDEQSKGNPG 510
Query: 336 EVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSID 395
EV +V +Q L A V + I V++PY Q +R+ + ++++S+D
Sbjct: 511 EVRLVGLHVQALVDAGV---RAADIAVITPYNLQVDLLRQSLAHRLPE-----LEIRSVD 562
Query: 396 GFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWG 455
GFQG E++ +I+S VR N G +GF+++ +R+NVA+TRAR + ++ + RT +S+ +
Sbjct: 563 GFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLK 621
Query: 456 ALV 458
LV
Sbjct: 622 TLV 624
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 279 (103.3 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 95/292 (32%), Positives = 142/292 (48%)
Query: 168 LLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 226
+LE L +T AS+ L + + +VIDE AQ E+ IPL A
Sbjct: 338 MLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKA--RKC 395
Query: 227 VLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSK--HLLNVQYRMHPSISLFPNLQ 284
+L GD QLP S + AG SL ERL ++ L VQYRMH +I + +
Sbjct: 396 ILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDT 455
Query: 285 FYRNQILDGANVKSKSYEKHYLPGT----ELG-PYSFINIIGGS----EEFIYHSCRNMV 335
Y Q+ ++V LPG E G P ++ G EE S N
Sbjct: 456 MYLGQLTAHSSVARHLLRD--LPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPG 513
Query: 336 EVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSID 395
EV +V +Q L A V ++ I VVSPY Q +R+ + + +++KS+D
Sbjct: 514 EVRLVSLHIQALVDAGVPARD---IAVVSPYNLQVDLLRQSLVHRHPE-----LEIKSVD 565
Query: 396 GFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTL 447
GFQG E++ +I+S VR N G +GF+++ +R+NVA+TRAR + ++ + RT+
Sbjct: 566 GFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTV 617
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 281 (104.0 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 89/275 (32%), Positives = 140/275 (50%)
Query: 184 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKI 243
ASS L + + +V+DE AQ E+ IPL A +L GD QLP S
Sbjct: 354 ASSDGPLKLLPENHFDVVVVDECAQALEASCWIPLLKAP--KCILAGDHRQLPPTTISHK 411
Query: 244 SDEAGFGRSLFERLTSLNHSK--HLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 301
+ AG RSL ERL + + +L VQYRMH +I+ + + Y Q+ +V
Sbjct: 412 AALAGLSRSLMERLVEKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLL 471
Query: 302 EKHYLPG---TELG--PYSFINIIGGS----EEFIYHSCRNMVEVSVVIKILQKLYKAWV 352
+ LPG TE P I+ G +E S N EV +V +Q L A V
Sbjct: 472 KD--LPGVADTEETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVDAGV 529
Query: 353 GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 412
+ I V++PY Q +R+ + +++ +++KS+DGFQG E++ +I++ VR
Sbjct: 530 HAGD---IAVIAPYNLQVDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVILTFVRS 581
Query: 413 NAGGSIGFISKPQRVNVALTRARHCLWILGNERTL 447
N G +GF+++ +R+NVA+TRAR + ++ + RT+
Sbjct: 582 NRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTV 616
Score = 41 (19.5 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 29 QSEEKECRKETEGSKGECKPFLKYVKERFKRAVV 62
++++ + ++E + E K K +KER + A+V
Sbjct: 305 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAIV 338
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 279 (103.3 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 86/258 (33%), Positives = 133/258 (51%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
+V+DE AQ E+ IPL A +L GD QLP S + AG RSL ERL
Sbjct: 371 VVVDECAQALEASCWIPLLKAP--KCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEK 428
Query: 261 NHSK--HLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPG---TELG--P 313
+ + +L VQYRMH +I+ + + Y Q+ +V + LPG TE P
Sbjct: 429 HGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKD--LPGVADTEETSVP 486
Query: 314 YSFINIIGGS----EEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 369
I+ G EE S N EV +V +Q L A V Q I V++PY Q
Sbjct: 487 LLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV---QAGDIAVIAPYNLQ 543
Query: 370 AVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNV 429
+R+ + +++ +++KS+DGFQG E++ +I++ VR N G +GF+++ +R+NV
Sbjct: 544 VDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINV 598
Query: 430 ALTRARHCLWILGNERTL 447
A+TRAR + ++ + T+
Sbjct: 599 AVTRARRHVAVICDSHTV 616
Score = 41 (19.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 29 QSEEKECRKETEGSKGECKPFLKYVKERFKRAVV 62
++++ + ++E + E K K +KER + A+V
Sbjct: 305 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAIV 338
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 279 (103.3 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 86/258 (33%), Positives = 133/258 (51%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
+V+DE AQ E+ IPL A +L GD QLP S + AG RSL ERL
Sbjct: 371 VVVDECAQALEASCWIPLLKAP--KCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEK 428
Query: 261 NHSK--HLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPG---TELG--P 313
+ + +L VQYRMH +I+ + + Y Q+ +V + LPG TE P
Sbjct: 429 HGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKD--LPGVADTEETSVP 486
Query: 314 YSFINIIGGS----EEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 369
I+ G EE S N EV +V +Q L A V Q I V++PY Q
Sbjct: 487 LLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV---QAGDIAVIAPYNLQ 543
Query: 370 AVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNV 429
+R+ + +++ +++KS+DGFQG E++ +I++ VR N G +GF+++ +R+NV
Sbjct: 544 VDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINV 598
Query: 430 ALTRARHCLWILGNERTL 447
A+TRAR + ++ + T+
Sbjct: 599 AVTRARRHVAVICDSHTV 616
Score = 41 (19.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 29 QSEEKECRKETEGSKGECKPFLKYVKERFKRAVV 62
++++ + ++E + E K K +KER + A+V
Sbjct: 305 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAIV 338
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 279 (103.3 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 89/275 (32%), Positives = 137/275 (49%)
Query: 184 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKI 243
ASS L + + +V+DE AQ E+ IPL A +L GD QLP S
Sbjct: 354 ASSDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAP--KCILAGDHRQLPPTTVSHR 411
Query: 244 SDEAGFGRSLFERLTSLNHSK--HLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 301
+ AG RSL ERL + + +L VQYRMH +I + + Y Q +V
Sbjct: 412 AALAGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLL 471
Query: 302 EKHYLPG---TELG--PYSFINIIGGS----EEFIYHSCRNMVEVSVVIKILQKLYKAWV 352
+ LPG TE P I+ G EE S N EV +V +Q L A V
Sbjct: 472 KD--LPGVTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV 529
Query: 353 GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 412
Q I V++PY Q +R+ + +++ +++KS+DGFQG E++ ++++ VR
Sbjct: 530 ---QAGDIAVIAPYNLQVDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVLLTFVRS 581
Query: 413 NAGGSIGFISKPQRVNVALTRARHCLWILGNERTL 447
N G +GF+++ +R+NVA+TRAR + ++ + T+
Sbjct: 582 NRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTV 616
Score = 39 (18.8 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 29 QSEEKECRKETEGSKGECKPFLKYVKERFKRAVV 62
++++ + ++E + E K K +KER + A+V
Sbjct: 305 KNKKTQDKREKGNFRSEIKLLRKELKEREEAAIV 338
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 267 (99.0 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 79/225 (35%), Positives = 124/225 (55%)
Query: 240 ASKISDEAGFGRSLFERLTSLNHS---KHLLNVQYRMHPSISLFPNLQFYRNQILDGANV 296
+S S + +LF+RL H K LL+VQYRM+ SI FP++Q Y NQ+ +V
Sbjct: 458 SSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSV 517
Query: 297 KSKSYEKHYLPGTELGPYSFINII-----GG------SEEFIYHSCRNMVEVSVVIKILQ 345
+ S LPG E+ + I GG SE S N +E+ VV ++
Sbjct: 518 REISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIK 575
Query: 346 KLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIG-------SEYENKDGFTVKVKSIDGFQ 398
KL + V Q IGV++PY+AQ ++K++G S +KDG +++ ++DGFQ
Sbjct: 576 KLLSSGV---QPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDG-QIEISTVDGFQ 631
Query: 399 GGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGN 443
G E+++II++ VR N IGF+S+ +R+NVA+TR + L ++G+
Sbjct: 632 GREKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGD 676
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/125 (34%), Positives = 64/125 (51%)
Query: 201 LVIDEAAQLKESESTIPLQLAG-INHAVLIGDECQLPAMVASKISDEAG----------F 249
++IDE +Q E + IPL L+ V+ GD QLP + ++ S+ +
Sbjct: 408 IIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASIL 467
Query: 250 GRSLFERLTSLNHS---KHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYL 306
+LF+RL H K LL+VQYRM+ SI FP++Q Y NQ+ +V+ S L
Sbjct: 468 ATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVD--L 525
Query: 307 PGTEL 311
PG E+
Sbjct: 526 PGVEI 530
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 267 (99.0 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 79/225 (35%), Positives = 124/225 (55%)
Query: 240 ASKISDEAGFGRSLFERLTSLNHS---KHLLNVQYRMHPSISLFPNLQFYRNQILDGANV 296
+S S + +LF+RL H K LL+VQYRM+ SI FP++Q Y NQ+ +V
Sbjct: 458 SSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSV 517
Query: 297 KSKSYEKHYLPGTELGPYSFINII-----GG------SEEFIYHSCRNMVEVSVVIKILQ 345
+ S LPG E+ + I GG SE S N +E+ VV ++
Sbjct: 518 REISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIK 575
Query: 346 KLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIG-------SEYENKDGFTVKVKSIDGFQ 398
KL + V Q IGV++PY+AQ ++K++G S +KDG +++ ++DGFQ
Sbjct: 576 KLLSSGV---QPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDG-QIEISTVDGFQ 631
Query: 399 GGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGN 443
G E+++II++ VR N IGF+S+ +R+NVA+TR + L ++G+
Sbjct: 632 GREKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGD 676
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/125 (34%), Positives = 64/125 (51%)
Query: 201 LVIDEAAQLKESESTIPLQLAG-INHAVLIGDECQLPAMVASKISDEAG----------F 249
++IDE +Q E + IPL L+ V+ GD QLP + ++ S+ +
Sbjct: 408 IIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASIL 467
Query: 250 GRSLFERLTSLNHS---KHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYL 306
+LF+RL H K LL+VQYRM+ SI FP++Q Y NQ+ +V+ S L
Sbjct: 468 ATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVD--L 525
Query: 307 PGTEL 311
PG E+
Sbjct: 526 PGVEI 530
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 265 (98.3 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 89/272 (32%), Positives = 138/272 (50%)
Query: 195 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLF 254
++ + +VIDEA Q E IP+ L G +L GD CQL +V S+ + E G G SL
Sbjct: 659 LETFDLVVIDEAGQSIEPSCWIPI-LQG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLL 716
Query: 255 ERLTSLNHSKHL---LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSY-EKHYLPGTE 310
ER SL H L L QYRM+ I+ + + + Y + +V S + ++ T
Sbjct: 717 ERAASL-HDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATW 775
Query: 311 LG-----------PYSFINIIGGSEEFI----YHSCRNMVEVSVVIKILQKLYKAWVGSK 355
+ PY +++ G EE + S N E +V+ + L A V
Sbjct: 776 ITQCPLVLLDTRMPYGSLSV--GCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSP- 832
Query: 356 QKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAG 415
++I V SPY AQ +R+++ ++ DG V+V +ID FQG E D +IIS VR N
Sbjct: 833 --MAIAVQSPYVAQVQLLRERL-DDFPVADG--VEVATIDSFQGREADAVIISMVRSNNL 887
Query: 416 GSIGFISKPQRVNVALTRARHCLWILGNERTL 447
G++GF+ +R+NVA+TRAR + ++ + T+
Sbjct: 888 GAVGFLGDSRRMNVAITRARKHVAVVCDSSTI 919
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 267 (99.0 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 89/271 (32%), Positives = 138/271 (50%)
Query: 201 LVIDEAAQLKESESTIPLQLAGIN--HA-VLIGDECQLPAMVASKISDEA--GFGRSLFE 255
L+IDE +Q E + IPL +A N H VL GD QLP + ++ +LF+
Sbjct: 392 LIIDEVSQAMEPQCWIPL-IAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFD 450
Query: 256 RLTSLNHSKHL---LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELG 312
R+ + + + LNVQYRM+ I FP+ Y ++L A V ++ LP +
Sbjct: 451 RIIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLID--LPTVDAT 508
Query: 313 PY-----SFINIIG---GSEEF--------IYHSCRNMVEVSVVIKILQKLYKAWVGSKQ 356
P + I +I +EF I S N E+++V + ++ L V
Sbjct: 509 PSEDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPEN- 567
Query: 357 KVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGG 416
SIGV+SPY AQ ++K I E + D +++ ++DGFQG E+D+II+S VR N
Sbjct: 568 --SIGVISPYNAQVSHLKKLIHDELKLTD---IEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 417 SIGFISKPQRVNVALTRARHCLWILGNERTL 447
+GF+ + +R+NVA+TR R L ++GN L
Sbjct: 623 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVL 653
Score = 38 (18.4 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 12/53 (22%), Positives = 29/53 (54%)
Query: 7 DCVSQYHIYVEKLEEREDCNVNQSEEKECRKETEGSKGECKPFLKYVKER-FK 58
D +S+ + V+ + + D + ++++ + K+ + + E K K +K+R FK
Sbjct: 300 DILSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKKREFK 352
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 277 (102.6 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 101/334 (30%), Positives = 160/334 (47%)
Query: 166 KLLLE--DFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL-QLAG 222
K+L E F R + T S + S++I + +++DEA E E+ IPL Q
Sbjct: 2321 KVLWEARKFELDRHEVILCTCSCAASA-SLKILDVRQILVDEAGMATEPETLIPLVQFPQ 2379
Query: 223 INHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPN 282
VL+GD QL +V ++ G RSLFER + H+L+ QYRMH I FP+
Sbjct: 2380 AEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERY---HEDAHMLDTQYRMHEGICAFPS 2436
Query: 283 LQFYRNQILDGANVKSK-SYEKHYLPGTELGPYSFINIIG-------GSEEFIYHSCRNM 334
+ FY++++ ++ S H G E P F ++ G ++E +S N+
Sbjct: 2437 VAFYKSKLKTWQGLRRPPSVLGH--AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANL 2494
Query: 335 VEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFT-VKVKS 393
EV+ V++I ++L Q I V++PY AQA I K + ++G V V S
Sbjct: 2495 EEVAEVVRITKQLTLGRTVEPQ--DIAVLTPYNAQASEISKAL-----RREGIAGVAVSS 2547
Query: 394 IDGFQGGEEDIIIISTVRCNAGGSI-------------GFISKPQRVNVALTRARHCLWI 440
I QG E +++STVR A + GF+ P +VNVA+TRA+ L +
Sbjct: 2548 ITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCL 2607
Query: 441 LGNERTLISSESIWGALVCDAKARQCFFNADEDR 474
+G + L+ +W +L+ +A+Q A + R
Sbjct: 2608 IG-DHLLLRCCPLWRSLLDFCEAQQTLVPAGQVR 2640
Score = 164 (62.8 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 81/296 (27%), Positives = 135/296 (45%)
Query: 176 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQ 234
R + +T S + +L V + + ++IDEAAQ+ E E+ PL A VL GD Q
Sbjct: 640 RHRVVVTTTSQARELR-VPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQ 698
Query: 235 L-PAM--VASKISDEAGFGRSLFERLTSLNH-----SKHLLNVQYRMHPSISLFPNLQFY 286
+ P + VA + E LF H S+ + + YR +I F + FY
Sbjct: 699 VTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFY 758
Query: 287 ---RNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSE-EFIYHSCRNMVEVSVVIK 342
N I A K + +HY P F ++ G + + S N+ E++ V++
Sbjct: 759 VAKGNPI--HARGKVPPHPRHY-------PLMFCHVAGSPDRDMSMASWLNLAEIAQVVE 809
Query: 343 ILQKLYKAWV---GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQG 399
+Q+ Y W G +++ I VVS + AQ A+R+ E +D V V S + G
Sbjct: 810 KVQEAYNTWPSCWGGREQRCICVVS-HGAQVSALRQ----ELRRRDLGQVSVGSFEILPG 864
Query: 400 GEEDIIIISTVR-CNA---GGSIG--FISKPQRVNVALTRARHCLWILGNERTLIS 449
+ ++++STV C + G++ F + + +N LTRA+ L ++G+ L S
Sbjct: 865 RQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCS 920
Score = 41 (19.5 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 122 EGISSAFVGKRYLLQLHQRRSECLSVLRNLW-NSLDEL 158
+G+ AF + L Q +QRR+ L + L LD+L
Sbjct: 1704 DGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLDKL 1741
Score = 40 (19.1 bits), Expect = 7.8e-19, Sum P(2) = 7.8e-19
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 119 SVDEGISSAFVGKRYLLQLHQRRSEC 144
SVD + +A R LL+ H+ RS+C
Sbjct: 1481 SVDACVVAACYFSR-LLRRHRLRSDC 1505
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 266 (98.7 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 92/310 (29%), Positives = 150/310 (48%)
Query: 176 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL-QLAGINHAVLIGDECQ 234
R L + ++S L ++++ + +IDEA E E+ IPL + VL+GD Q
Sbjct: 2605 RVILCTCSCAASASLRKLDVRQI---LIDEAGMATEPETLIPLVAFSKAEKVVLLGDHKQ 2661
Query: 235 LPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGA 294
L +V ++ G RSLFER + H+L+ QYRMH I FP+++FY ++
Sbjct: 2662 LRPVVKNEQLQNLGLDRSLFERY---HVDAHMLDTQYRMHEGICAFPSMEFYEKKLKTWQ 2718
Query: 295 NVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIY-------HSCRNMVEVSVVIKILQKL 347
++ ++ G E F ++ G + + +S N EV+ V++I ++L
Sbjct: 2719 GLRRPPSILGHI-GKESCSVIFGHVQGHEQSLLVSTDEGNENSKANPEEVAAVVRIAKQL 2777
Query: 348 YKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIII 407
+ V+I ++PY AQA I K++ E G TV SI QG E +++
Sbjct: 2778 TLGRTVEPKDVAI--LTPYNAQAAEISKRLVRE--GVSGVTVC--SITKSQGSEWRYVLV 2831
Query: 408 STVR-CNAGGS------------IGFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
STVR C +GF+ P +VNVA+TRAR L ++G+ R L+S +W
Sbjct: 2832 STVRTCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRAREGLCVIGDHR-LLSCCPLW 2890
Query: 455 GALV--CDAK 462
+ C+A+
Sbjct: 2891 RRFLDFCEAQ 2900
Score = 180 (68.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 79/299 (26%), Positives = 138/299 (46%)
Query: 182 STASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQL-PAMV 239
+T S + +L V + ++IDEAAQ+ E E+ PL+ A VL GD Q+ P +
Sbjct: 893 TTTSQARELR-VPAGFFSHILIDEAAQMLECEALTPLRYAAPGTRVVLAGDHMQVTPRLF 951
Query: 240 ASKISDEAGFGR--SLFERLTSLNH-----SKHLLNVQYRMHPSISLFPNLQFYRNQILD 292
+ + AG LF+ H S+ + + YR +I F + FY +
Sbjct: 952 SVPRAQAAGHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRSTEAILSFVSRHFY---VAK 1008
Query: 293 GANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIYH-SCRNMVEVSVVIKILQKLYKAW 351
G+ + + P L P F ++ G E + S N EV+ V++ ++ L+ W
Sbjct: 1009 GSPIHASG---RVPPHPRLHPLMFCHVAGNPERDLSSTSWLNAAEVAQVVEQVRDLHDGW 1065
Query: 352 V---GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIIS 408
G++++ I VVS + AQ A+R+ E ++ V V S + G E ++++S
Sbjct: 1066 PSCWGAREQKHICVVS-HGAQVTALRQ----ELRKRNLGQVSVGSFEILPGREFRVVVLS 1120
Query: 409 TVR-----CNAG-GSIGFISKPQRVNVALTRARHCLWILGNERTLISS---ESIWGALV 458
TV ++G S+GF + + +N +TRA+ + +GN L SS +W + +
Sbjct: 1121 TVHNHHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNALALCSSGACSKLWKSFI 1179
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 254 (94.5 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 98/320 (30%), Positives = 147/320 (45%)
Query: 183 TASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASK 242
T SS+ K E+ ++IDE A E E+ IPL VL+GD Q+ +V
Sbjct: 185 TCSSALKPELREVMDFRQILIDECAMATEPEAFIPLVSHNPQQIVLLGDHQQIRPIVQCG 244
Query: 243 ISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN-----VK 297
G +SLFER L ++L+ QYRMH I FP+ +FY ++ GA +
Sbjct: 245 HVKNKGMEKSLFERYMDL---ANMLDTQYRMHAEICSFPSDEFYDGKLKTGAERGPCCLL 301
Query: 298 SKSYEKH-YLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQ 356
+KS E L G G ++++ +E+ +S N E + + L K S +
Sbjct: 302 NKSKEPTAMLFGHIEGKE--VSLVVSTEKGNENSMANTEEAEQAVCVADLLIKQSGVSPE 359
Query: 357 KVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNA- 414
++I ++PY AQ I+ + E K+ V V ++ QG E +I+STVR C+
Sbjct: 360 HIAI--LTPYNAQVSEIKMTL----EKKNVRNVTVCTVMKSQGSEWPYVIVSTVRSCSTS 413
Query: 415 --------------GGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCD 460
G +GF++ +VNVA+TRA+ L ILGN L E +W L+
Sbjct: 414 DIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCE-LWDRLLDH 472
Query: 461 AKARQCFFNADEDRNV-AKA 479
+ C N D V AKA
Sbjct: 473 YYRKSCVVNPASDIRVKAKA 492
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 259 (96.2 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 91/299 (30%), Positives = 140/299 (46%)
Query: 199 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLT 258
+F ++DEA+Q+ + PL A + VL+GD QLP +V S + E G SLF+RL
Sbjct: 758 DFCIVDEASQISQPICLGPLFFA--DRFVLVGDHQQLPPLVKSAEARELGMSESLFKRLE 815
Query: 259 SLNHSKHLLNVQYRMHPSISLFPNLQFYR-----------NQILDGANVKSKSYEKHYLP 307
+ L VQYRM+ I N Y N ++ ++K+ E +
Sbjct: 816 RNQEAVVQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRE 875
Query: 308 GTEL----------GPYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLY-KAWVGS 354
E P F+N I E N +E +V L KLY KA G
Sbjct: 876 SQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFH-LTKLYLKA--GC 932
Query: 355 KQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNA 414
+ IG+++PY Q K I + + + V+V ++D +QG ++ +II+S VR N
Sbjct: 933 RPS-DIGIIAPYRQQL----KMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNI 987
Query: 415 GGSIGFISKP-QRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADE 472
G +G + K +R+NVALTRA+H L +LG TL + + L+C+ K ++ E
Sbjct: 988 DGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFDCL-EQLICNLKTENQIYDLPE 1045
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 261 (96.9 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 104/332 (31%), Positives = 158/332 (47%)
Query: 175 KRASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQ-LAGINHAVLIGD 231
+R S+ T S + S +K LN ++IDEA E E+ IPL + VL+GD
Sbjct: 2627 ERHSVILCTCSCAA---SGSLKALNVRQILIDEAGMATEPETLIPLVCFSKTEKVVLLGD 2683
Query: 232 ECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQIL 291
QL +V ++ G RSLFER + +L+ QYRMH I FP+++FY ++
Sbjct: 2684 HKQLRPVVKNEQLRNLGMDRSLFERY---HRDAIMLDTQYRMHKDICSFPSMEFYGGKLK 2740
Query: 292 DGANVKSK-SYEKHYLPGTELGPYSFINIIG-------GSEEFIYHSCRNMVEVSVVIKI 343
+++K S H G + P F ++ G +EE +S N EV+ V++I
Sbjct: 2741 TWSDLKRPPSLLGHV--GKQSCPVIFGSVQGYEQKLLVSTEEGNENSRANPEEVTEVVRI 2798
Query: 344 LQKL-YKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEE 402
+++L V K + V++PY AQA AI + G G TV SI QG E
Sbjct: 2799 IKQLTLDRTVDPKD---VAVLTPYNAQAAAISR--GLMQRGVTGVTVT--SITKSQGSEW 2851
Query: 403 DIIIISTVR-CNAGGS------------IGFISKPQRVNVALTRARHCLWILGNERTLIS 449
+I+STVR C +GF+ P +VNVA+TRA+ L I+G + L+
Sbjct: 2852 RYVIVSTVRTCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCIIG-DHLLLR 2910
Query: 450 SESIWGALVCDAKARQCFFNADEDRNVAKARL 481
+W L+ +A+ A+ R K+ L
Sbjct: 2911 CCPLWHRLLGFCEAQNSLVPAERVRVQRKSAL 2942
Score = 185 (70.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 87/321 (27%), Positives = 144/321 (44%)
Query: 176 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA-GINHAVLIGDECQ 234
R L +T S + +L V + + IDEAAQ+ E E+ IPL A + VL GD Q
Sbjct: 885 RHRLVVTTTSQARELQ-VPAGFFSHIFIDEAAQMLECEALIPLSYALTLTRVVLAGDHMQ 943
Query: 235 LPAMVASKISDEAGFGRSLFERL---------TSLNHSKHLLNVQYRMHPSISLFPNLQF 285
+ + S D+A G L RL HS+ + + YR +I F + F
Sbjct: 944 VTPRLFSVPRDKAA-GHMLLHRLFLYYQQEVHKIAQHSRIVFHENYRSTAAIINFVSRHF 1002
Query: 286 Y--RNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIYH-SCRNMVEVSVVIK 342
Y + + A+ K + +HY P F ++ G E+ + S N EV+ V++
Sbjct: 1003 YVAKGNPIQ-ASGKVPRHPQHY-------PLMFCHVAGSPEQDMSRTSWLNSAEVTQVVE 1054
Query: 343 ILQKLYKAWV---GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQG 399
+Q++Y W G +++ I VS + AQ A+R+ E ++ V V S + G
Sbjct: 1055 KVQEIYNTWPHCWGPREQRHICAVS-HGAQVSALRQ----ELRRRNLGEVSVGSFEILPG 1109
Query: 400 GEEDIIIISTVRC-NAGGSIG-----FISKPQRVNVALTRARHCLWILGNERTLISS--- 450
E ++++S+V N+ S G F ++P+ +N +TRA+ L +G+ L SS
Sbjct: 1110 REFRVVVLSSVHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGAC 1169
Query: 451 ESIWGALVCDAKARQCFFNAD 471
+W + + F D
Sbjct: 1170 RKLWKNFIRECIEHHSIFPED 1190
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 259 (96.2 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 79/265 (29%), Positives = 135/265 (50%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVASKISDEAGFGRSLFERLTS 259
L+++EAA++ E+ I ++ + H V+IGD QL P ++ G S+FERL
Sbjct: 1464 LIVEEAAEVLEAH-IISAMISTVEHVVMIGDHKQLRPNPAVHELGVAYGLRISMFERLVE 1522
Query: 260 LNHSKHLLNVQYRMHPSIS-LFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFIN 318
L Q+RM+ +IS L FY N + D NV Y T L +S +
Sbjct: 1523 RGLPFSQLRQQHRMNLTISDKIVKLSFYDN-VTDAENVGL--YPDVQGMATNLFFWSHTS 1579
Query: 319 IIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIG 378
+ +E S N E+S+ + +++ L K + V V++ Y+AQ + ++
Sbjct: 1580 MEESPDEV---SWLNKHEISMTVALVKHLLKQNYTTNDIV---VLATYSAQKNLMYREYA 1633
Query: 379 SEY-ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGG----SIGFISKPQRVNVALTR 433
+ + D + V+++D FQG E I+I+S VR + GG IGF++ R+ VALTR
Sbjct: 1634 NVFGSTPDSNVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTR 1693
Query: 434 ARHCLWILGNERTLISSESIWGALV 458
A+H ++I+GN ++++ +W +V
Sbjct: 1694 AQHGMYIIGNGAYIMNNSELWNKIV 1718
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 252 (93.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 89/310 (28%), Positives = 150/310 (48%)
Query: 176 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL-QLAGINHAVLIGDECQ 234
R L + ++S L V I+ + ++DEA E E+ IPL + + VL+GD Q
Sbjct: 2567 RVLLCTCSCAASASLRDVNIRQI---LVDEAGLASEPETLIPLVSFSQVEKVVLLGDHKQ 2623
Query: 235 LPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQIL--D 292
L +V S+ G RSL +R +L++QY +H SI FP+++FY+ ++
Sbjct: 2624 LRPVVKSEQLQNLGLDRSLLQRY---RRDASMLDLQYCVHESICAFPSMEFYKKKLKTWQ 2680
Query: 293 GANVKSK--SYEKH---YLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKL 347
G + Y K + G P +++ +EE +S N + ++V+ + ++L
Sbjct: 2681 GLRLPPSILGYGKENCSVIFGDVQSPEE--SLVVSTEEGRENSKVNKEQAALVVCLAKQL 2738
Query: 348 YKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIII 407
V K + +++PY AQ + I K++ E G TV SI QG + +++
Sbjct: 2739 VSGRVDPKD---MAILTPYHAQVLEISKRL--EEARVAGVTVC--SITKSQGRQWRYVLV 2791
Query: 408 STVR-CNAGG------------SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
STVR C S+GF+ P +VNVALTRA+ LW++G +R L+ +W
Sbjct: 2792 STVRTCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVG-DRLLLRCCPLW 2850
Query: 455 GALV--CDAK 462
+ C+A+
Sbjct: 2851 SRFLDFCEAQ 2860
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 247 (92.0 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 79/280 (28%), Positives = 142/280 (50%)
Query: 182 STASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVA 240
+T ++ Y+ +++P ++++EAA++ E+ + L A H +LIGD QL P+
Sbjct: 978 TTGAAKYRQILQQVEP-RIVIVEEAAEVLEAHTIATLSKA-CQHLILIGDHQQLRPSANV 1035
Query: 241 SKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKS 300
++ SLFERL +N LN Q+RM P I+ Y++ L+ K
Sbjct: 1036 YDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMRPEIARLLTPHIYQD--LENHPSVLK- 1092
Query: 301 YEKHYLPGTELGPYSFINIIGGSEEFIY-HSCRNMVEVSVVIKILQKLY-KAWVGSKQKV 358
YE+ + G + F+ +E S +N E V+++ Q L + ++ S+
Sbjct: 1093 YEQ--IKGVSSNLF-FVEHNFPEQEIQEGKSHQNQHEAHFVVELCQYLLCQEYLPSQ--- 1146
Query: 359 SIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSI 418
I +++ YT Q +RK + K +KV +D +QG E DII++S VR N G +
Sbjct: 1147 -ITILTTYTGQLFCLRKLMPV----KTFAGIKVHVVDKYQGEENDIILLSLVRSNQEGKV 1201
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALV 458
GF+ P R+ VAL+RA+ ++ +GN + +++ +W ++
Sbjct: 1202 GFLQIPNRICVALSRAKKGMYCIGNMQ-MLAKVPLWSRII 1240
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 243 (90.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 97/314 (30%), Positives = 147/314 (46%)
Query: 186 SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA---VLIGDECQLPAMVASK 242
SS S+E + ++IDE A E E+ IPL HA VL+GD QL +V +
Sbjct: 2258 SSASAGSLEKLNVKQILIDECAMSTEPETLIPL--VSHKHAEKVVLLGDHKQLKPVVNND 2315
Query: 243 ISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN---VKSK 299
G SLFER +L+ QYRMH +I FP+ +FY +++ + S
Sbjct: 2316 FCKSLGMETSLFERYQK---QAWMLDTQYRMHKNICEFPSQEFYEHRLKTCPQLLRIPSV 2372
Query: 300 SYEKHY--LP---GTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGS 354
Y K+ P G G +++ +EE +S N EV ++ ++L G+
Sbjct: 2373 LYHKNNRCCPIIFGHVEGKEQ--SLVISTEEGNENSKANPEEVEQAVRTAKQL--TLDGT 2428
Query: 355 KQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVR-C 412
+ SI ++SPY AQ I K++ K+G V V +I QG E +I+STVR C
Sbjct: 2429 IRPQSIAILSPYNAQVSEINKRL-----LKEGIRGVTVCTIMKSQGSEWRYVILSTVRSC 2483
Query: 413 NAGG------------SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCD 460
+ +GF++ P +VNVA+TRA+ L I+GN R L+ +W L+
Sbjct: 2484 SRHEIDKKPTKSWQKKHLGFVTDPNQVNVAITRAQEGLCIIGN-RYLLECNPLWRRLLQH 2542
Query: 461 AKARQCFFNADEDR 474
C+ + E R
Sbjct: 2543 YIDHNCYTSGQEIR 2556
Score = 177 (67.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 93/363 (25%), Positives = 160/363 (44%)
Query: 201 LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQL-PAMVASKISDEAGFGRSLFERLT 258
++IDEAAQ+ E E+ IPL A VL GD Q+ P + ++D +L RL
Sbjct: 661 IMIDEAAQMLECEALIPLSYATFETRIVLAGDHMQITPKLFC--VADGQSAYHTLLNRLF 718
Query: 259 SL-NHSKH--------LLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGT 309
KH + N YR I F + FY I G + + + P
Sbjct: 719 QFYQKEKHEVAMKSRIIFNENYRSTAGIIEFVSKHFY---IGKGNAIHASG---NIPPHP 772
Query: 310 ELGPYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWV---GSKQKVSIGVVSP 365
E+ P F ++ G +E + S N E++ V++ ++++Y+ W G++ + I VVS
Sbjct: 773 EIYPLMFCHVPGVAERDMSMISWHNASEITQVVEKVEEIYQRWPHEWGAQDQKRICVVS- 831
Query: 366 YTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTV------RCNAGGSIG 419
+ Q AIR+ E K V V++ + G E +IIISTV R +A +
Sbjct: 832 HGVQVSAIRQ----ELRKKQLPEVVVENYENLPGREFRVIIISTVHTSESLRVSASHNHE 887
Query: 420 FISKPQRVNVALTRARHCLWILGNERTLISS---ESIWGALVCDAKARQCFFNADEDRNV 476
F ++ + +N +TRA+ + ++G+ L S +W + ++C E ++
Sbjct: 888 FFNEARVLNTIMTRAQSQVIVVGDAVALCSHGQCSKVWKRFI-----QECI----EKGSI 938
Query: 477 AKARLDIGK-ELVEIGAESLTSTNQRGKTTLCYDKDGETYREERSTATDSEAAADPMFNS 535
+ A L + + + ES + G D+D +T + S+ T+S DP+
Sbjct: 939 SPANLTMAQIKQAACDKESWCRRSPEGN-----DEDSDT--DSWSSETESMNPDDPILQE 991
Query: 536 TLN 538
L+
Sbjct: 992 LLD 994
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 241 (89.9 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 95/343 (27%), Positives = 165/343 (48%)
Query: 124 ISSAFVGKRYLLQLHQR--RSECLSVLRNLWNSLDELNLPCTTSKLLLEDF-CFKRASLF 180
+SS + R LQL+Q R + LS R S + + L ED K A +
Sbjct: 927 LSSRWQLYRLWLQLYQADTRRKILSYERQYRTSAERM-----AELRLQEDLHILKDAQVV 981
Query: 181 FSTASSSYKLHSV--EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PA 237
T + + K + +++P ++++EAA++ E+ + L A H +LIGD QL P+
Sbjct: 982 GMTTTGAAKYRQILQKVEP-RIVIVEEAAEVLEAHTIATLSKA-CQHLILIGDHQQLRPS 1039
Query: 238 MVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVK 297
++ SLFERL +N LN Q+RM P I+ Y++ L+
Sbjct: 1040 ANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARLLTPHIYQD--LENHPSV 1097
Query: 298 SKSYEKHYLPGTELGPYSFINIIGGSEEFIY-HSCRNMVEVSVVIKILQK-LYKAWVGSK 355
K YEK + G + F+ +E S +N E V+++ + L + ++ S+
Sbjct: 1098 LK-YEK--IKGVSSNLF-FVEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQ 1153
Query: 356 QKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAG 415
I +++ YT Q +RK + + K V+V +D +QG E DII++S VR N
Sbjct: 1154 ----ITILTTYTGQLFCLRKLMPA----KTFAGVRVHVVDKYQGEENDIILLSLVRSNQE 1205
Query: 416 GSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALV 458
G +GF+ R+ VAL+RA+ ++ +GN + +++ +W ++
Sbjct: 1206 GKVGFLQISNRICVALSRAKKGMYCIGNMQ-MLAKVPLWSKII 1247
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 239 (89.2 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 82/276 (29%), Positives = 132/276 (47%)
Query: 182 STASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVA 240
+T + Y+ I P I+EAA + E IP + VLIGD QL P
Sbjct: 690 TTGLNKYRDILERINP-KICFIEEAADVLEGP-IIPAVFPSLEQLVLIGDHKQLRPGCST 747
Query: 241 SKI-SDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSK 299
+ D S+FERL + L +Q RMHP I + Y + L + +K
Sbjct: 748 YALRQDPFNLSISMFERLVENDMEYTRLTMQRRMHPQIRRLVS-SVYED--LSDYEI-TK 803
Query: 300 SYEKHYLPGT-ELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKV 358
+ +PG E+ + F+ + + S N+ E ++++ L V QK+
Sbjct: 804 YWPS--IPGMGEIRRF-FLTHSRIEDNDGFASKINLFEAQMLVQFAVYLINNGV-EPQKI 859
Query: 359 SIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSI 418
+ ++ Y AQ I + + SE N++ +KV ++DG+QG E D++++S VR N +
Sbjct: 860 TC--LTFYAAQKDLIERLL-SESLNREKHFIKVATVDGYQGEENDVVLLSLVRNNDRTEV 916
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
GF+S P RV V+L+RAR L+I GN + + S +W
Sbjct: 917 GFLSSPHRVCVSLSRARRGLFIFGNAQLVAESNPLW 952
Score = 44 (20.5 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 110 EELEKLFSHS---VDEGISSAFVGKR--YLLQ----LHQRRSECLSVLRNLWN 153
EE++K S ++E + F+ R YL LH++ + L + N+W+
Sbjct: 577 EEIQKEAEDSGALMEEELRGKFINLRCKYLFSKLTTLHEKEIDTLLTIPNIWD 629
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 158 (60.7 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 42/133 (31%), Positives = 73/133 (54%)
Query: 313 PYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
P F+N + E+ N++E +V+ + KA G K IG+++PY Q
Sbjct: 891 PVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 947
Query: 371 VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNV 429
I + ++ G V+V ++D +QG ++ I+++S VR N G++G + K +R+NV
Sbjct: 948 KVISDLLA---QSSVGM-VEVNTVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNV 1003
Query: 430 ALTRARHCLWILG 442
A+TRA+H L +LG
Sbjct: 1004 AITRAKHKLILLG 1016
Score = 128 (50.1 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 754 KTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 811
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL ++ L VQYRM+ I N Y ++ G++
Sbjct: 812 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 851
Score = 41 (19.5 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 75 LPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEELEKLFSHSVDEGISSAFVGKRYL 134
L +++ S + + + +LH D+ E+L++L S ++ E + + Y
Sbjct: 143 LSETFRSSDPATRQMLIGTVLHEVFQKAVSDSFAPEKLQELASQTIQE---IRHLKEMYR 199
Query: 135 LQLHQ 139
L+L+Q
Sbjct: 200 LKLNQ 204
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 228 (85.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 77/275 (28%), Positives = 131/275 (47%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 754 KTFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHKQLPPLVLNREARALGMSESLFK 811
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGA-----------NVKSKSYEKH 304
RL + L +QYRM+ I N Y ++ G+ N+K E +
Sbjct: 812 RLERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFY 871
Query: 305 -------YLPGT--ELGPYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVG 353
+L G P F+N + E+ N+ E +++ + KA G
Sbjct: 872 ADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKA--G 929
Query: 354 SKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 413
IG+++PY Q I + + G V+V ++D +QG ++ +I++S VR N
Sbjct: 930 CSPS-DIGIIAPYRQQLRTITDLLA---RSSVGM-VEVNTVDKYQGRDKSLILVSFVRSN 984
Query: 414 AGGSIGFISKP-QRVNVALTRARHCLWILGNERTL 447
G++G + K +R+NVA+TRA+H L +LG+ +L
Sbjct: 985 EDGTLGELLKDWRRLNVAITRAKHKLILLGSVSSL 1019
Score = 50 (22.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 22/102 (21%), Positives = 49/102 (48%)
Query: 80 ISENSFQDMVALKILLHTFGTLLFKDNVVSEELEKLFSH-SVDEGISSAFVGKRYLL-QL 137
+ E+S + V +L F + V+S ++ + +V+ ++ +++LL +
Sbjct: 12 LEEDSGAEAVPRMEILQKKADAFFAETVLSRGVDNRYLVLAVETKLNERGAEEKHLLITV 71
Query: 138 HQR-RSECLSVLRNLWNSL-----DELNLP--CTTSKLLLED 171
Q E L +LRN W+S+ D +++ CT+ +++D
Sbjct: 72 SQEGEQEVLCILRNGWSSVPVEPGDIIHIEGDCTSEPWIVDD 113
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 158 (60.7 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 42/133 (31%), Positives = 73/133 (54%)
Query: 313 PYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
P F+N + E+ N++E +V+ + KA G K IG+++PY Q
Sbjct: 967 PVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 1023
Query: 371 VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNV 429
I + ++ G V+V ++D +QG ++ I+++S VR N G++G + K +R+NV
Sbjct: 1024 KVISDLLA---QSSVGM-VEVNTVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNV 1079
Query: 430 ALTRARHCLWILG 442
A+TRA+H L +LG
Sbjct: 1080 AITRAKHKLILLG 1092
Score = 128 (50.1 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 830 KTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 887
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL ++ L VQYRM+ I N Y ++ G++
Sbjct: 888 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 927
Score = 41 (19.5 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 75 LPKSYISENSFQDMVALKILLHTFGTLLFKDNVVSEELEKLFSHSVDEGISSAFVGKRYL 134
L +++ S + + + +LH D+ E+L++L S ++ E + + Y
Sbjct: 219 LSETFRSSDPATRQMLIGTVLHEVFQKAVSDSFAPEKLQELASQTIQE---IRHLKEMYR 275
Query: 135 LQLHQ 139
L+L+Q
Sbjct: 276 LKLNQ 280
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 219 (82.2 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 79/272 (29%), Positives = 128/272 (47%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 76 KIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 133
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDG----AN----------VKSK-- 299
RL + L VQYRM+ I N Y ++ G AN VK +
Sbjct: 134 RLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELE 193
Query: 300 ---SYEKH-YLPGT--ELGPYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAW 351
Y + +L G P F+N + E+ N+ E +++ + KA
Sbjct: 194 FYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKA- 252
Query: 352 VGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G IG+++PY Q I + G V+V ++D +QG ++ I+++S VR
Sbjct: 253 -GCSPS-DIGIIAPYRQQLKIINDLLARSI----GM-VEVNTVDKYQGRDKSIVLVSFVR 305
Query: 412 CNAGGSIGFISKP-QRVNVALTRARHCLWILG 442
N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 306 SNKDGTVGELLKDWRRLNVAITRAKHKLILLG 337
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 236 (88.1 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 98/337 (29%), Positives = 172/337 (51%)
Query: 191 HSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGF 249
HS+ K ++ +IDEA+Q+ PLQLA VL+GD QLP +V + + + G
Sbjct: 1051 HSIFNKRKFDYCIIDEASQIPLPICLGPLQLA--EKFVLVGDHYQLPPLVKNSRTSKDGL 1108
Query: 250 GRSLFERLTSLNHSKHL--LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLP 307
SLF +L S H + + L +QYRM+ I+ + Y ++ G+ K+ S +K LP
Sbjct: 1109 SLSLF-KLLSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGS--KTISQKKLILP 1165
Query: 308 GTELG---PYS-----FIN-IIGGSEEFIYHSCRNMVEV-SVVIKILQKLYKAWV----- 352
L P S ++N +I S I+ + +++ V S IL+ +A++
Sbjct: 1166 KAHLSDGLPDSSSSLHWVNKLINPSHSVIFFNTDDILGVESKTNNILENHTEAFLIEQAV 1225
Query: 353 ------GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIII 406
G KQ SIG++S Y +Q + K + S E +++ ++D +QG ++DII+
Sbjct: 1226 SSFLERGVKQS-SIGIISIYKSQVELLSKNLKSFTE------IEINTVDRYQGRDKDIIL 1278
Query: 407 ISTVRCNAGGSIGFISKP-QRVNVALTRAR-HCLWILGNERTLISSESIWGALVCDAKAR 464
IS VR N+ +G + + R+NVAL+RA+ C+ + G+ TL SS +I L+ +
Sbjct: 1279 ISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCI-MFGSLSTL-SSSNIVSHLLKLLEKN 1336
Query: 465 QCFFNADEDRNVAKARLDIGKELVEIGAESLTSTNQR 501
+ F +E+ ++A + D ++ ++ T+ N +
Sbjct: 1337 KWIFTLNEN-DIA-TKFDENSSPIKDCSQVATTNNAK 1371
Score = 43 (20.2 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 165 SKLLLEDFCFKRASLFFSTASSSYKLHS-VEIKPLN 199
+KL LE+F + AS S+ S K HS + IK N
Sbjct: 44 TKLKLENFAYN-ASTEISSPKISEKKHSSLPIKRKN 78
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 151 (58.2 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 43/138 (31%), Positives = 73/138 (52%)
Query: 313 PYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
P F+N + E+ N+ E +++ + KA G IGV++PY Q
Sbjct: 892 PVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKA--GCSPS-DIGVIAPYRQQL 948
Query: 371 VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNV 429
I + + G V+V ++D +QG ++ +I++S VR N G++G + K +R+NV
Sbjct: 949 RIISDLLA---RSSVGM-VEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNV 1004
Query: 430 ALTRARHCLWILGNERTL 447
ALTRA+H L +LG+ +L
Sbjct: 1005 ALTRAKHKLILLGSVSSL 1022
Score = 124 (48.7 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 755 KTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVVNREARALGMSESLFK 812
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL + L VQYRM+ I N Y ++ G++
Sbjct: 813 RLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSD 852
Score = 50 (22.7 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 22/102 (21%), Positives = 44/102 (43%)
Query: 80 ISENSFQDMVALKILLHTFGTLLFKDNVVSEELEKLF---SHSVDEGISSAFVGKRYLLQ 136
+ E+ + V LL LF + V+S ++ + + + A + ++
Sbjct: 12 LEEDGGAEAVPRVELLRKKADALFPETVLSRGVDNRYLVLAVETSQNERGAEEKRLHVTA 71
Query: 137 LHQRRSECLSVLRNLWNSL-----DELNLP--CTTSKLLLED 171
R E L +LRN W+S+ D ++L CT+ +++D
Sbjct: 72 SQDREHEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWIIDD 113
Score = 41 (19.5 bits), Expect = 7.7e-07, Sum P(4) = 7.7e-07
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 230 GDECQLPAMVASKISDE 246
GD+ +P + SKI +E
Sbjct: 414 GDDASIPEAMLSKIQEE 430
Score = 39 (18.8 bits), Expect = 7.7e-07, Sum P(4) = 7.7e-07
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 267 LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGT 309
L +++HP I F + R++ + + Y H + T
Sbjct: 700 LGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNSHPIVAT 742
Score = 39 (18.8 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 450 SESIWGALVCDAKARQCFFNADE 472
S+S W A V + CF N D+
Sbjct: 878 SDSPWLAGVLEPDNPVCFLNTDK 900
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 149 (57.5 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 42/133 (31%), Positives = 70/133 (52%)
Query: 313 PYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
P F+N + E+ N+ E +++ + KA G K IG+++PY Q
Sbjct: 470 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 526
Query: 371 VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNV 429
I + + + V+V ++D +QG ++ II++S VR N G IG + K +R+NV
Sbjct: 527 KIINDLL---FHSSIRM-VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 582
Query: 430 ALTRARHCLWILG 442
A+TRA+H L +LG
Sbjct: 583 AITRAKHKLILLG 595
Score = 125 (49.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 333 KTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFK 390
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL ++ L VQYRM+ I N Y ++ G++
Sbjct: 391 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 430
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 245 (91.3 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 91/295 (30%), Positives = 135/295 (45%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
++IDE A E ++ +PL VL+GD QL +V + G RSLFER
Sbjct: 2493 ILIDECAMATEPQTLVPLVSFKPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYMD- 2551
Query: 261 NHSKHLLNVQYRMHPSISLFPNLQFY----------RNQILDGANVKSKSYEKHYLPGTE 310
+L+ QYRMH I FP+ +Y R +L+ A + + K L G
Sbjct: 2552 --RAIMLDTQYRMHEEICKFPSEAYYNDMLKTVVRERTSVLN-AETEGRRQSKRILFGDI 2608
Query: 311 LGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
G I ++ + +S N EV ++I +L VG + I ++SPY AQ
Sbjct: 2609 RGEE--IGLVVSTARGNENSKANFDEVKKAVEICIQLVT--VGRVRPEDIAILSPYNAQV 2664
Query: 371 VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNA------------GGS 417
IR+++ S++E K GFTV +I QG E +I+S VR C +
Sbjct: 2665 AQIRERL-SDFELK-GFTVT--TITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKH 2720
Query: 418 IGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADE 472
IGF+ ++NV +TRA+ L ILGN+ L S + W L+ C AD+
Sbjct: 2721 IGFVGDENQINVGITRAQVGLCILGNQAVLNCSPA-WQKLLKHYSGHGCVVTADQ 2774
Score = 179 (68.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 102/390 (26%), Positives = 165/390 (42%)
Query: 179 LFFSTASSSYKLHSVEIKPLNF---LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQ 234
+ +T S + LH +++ P F ++IDEA+Q+ E E+ + L LA + VL GD Q
Sbjct: 660 IIITTTSIARHLHELKL-PKGFFTHILIDEASQMLEGEALMALGLADKHTRVVLAGDHMQ 718
Query: 235 LPAMVASKISDEAGFGRSLFERL------TSLNHSKH---LLNVQYRMHPSISLFPNLQF 285
+ + S ++D+ +L RL S+N +K + N YR I F + F
Sbjct: 719 MAPKLFS-VTDDKRSEHTLLNRLFHYYQDQSINIAKKSRIIFNENYRSTTEIVDFVSTYF 777
Query: 286 YRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGG---SEEFIYHSCRNMVEVSVVIK 342
Y + DG +K++ + H P L P F ++ G S S N EV+ V+
Sbjct: 778 Y---VSDG--IKARG-DVH--PHPRLKPLIFHHVRGECHLSSTITSTSWLNYAEVNSVVN 829
Query: 343 ILQKLYKAWV---GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQG 399
++Q L W G K I V+S Q AIR + K + V V+++ QG
Sbjct: 830 MVQVLLTDWPMEWGDKDPKQICVLSE-GQQVAAIRIHL----RRKGFYGVSVQNLANIQG 884
Query: 400 GEEDIIIISTVRCNA------GGSIGFISKPQRVNVALTRARHCLWILGNERTLI---SS 450
+ +III+TV F + +N ALTRA+ + ++G+ L
Sbjct: 885 KQFRVIIITTVHTRDKLLQLDSSCPEFFDDIRALNTALTRAQSLVVVIGDAGALCCFGKC 944
Query: 451 ESIWGALV--CDAKARQCFFNADE-DRNVAKAR-LDIGKELVEIGAESL-TSTNQRGKTT 505
+W A + C +K D R+V + L+I K E + T N + +T
Sbjct: 945 SKVWRAYIEHCISKGS---IKPDHFTRDVLQREVLEISKFQKTENVEKIETVVNLQAETD 1001
Query: 506 LCYDKDGETYREERSTATDSEAAADPMFNS 535
K+ E Y + + D +F S
Sbjct: 1002 AIL-KEMENYDSDAQKSDDDNEQKRRIFTS 1030
Score = 38 (18.4 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 23/91 (25%), Positives = 38/91 (41%)
Query: 110 EELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLL- 168
EEL +F+H V + +S + + L + S L + N EL +P ++
Sbjct: 1442 EELNIMFNHEVSKFLSE-YTDTKSCTPLRCQDSPNAEALEKISNQHMEL-IPFSSHLTFH 1499
Query: 169 LEDFCFKRASLFFSTASSSYKLHSVEIKPLN 199
LE +R L + + Y L S + P N
Sbjct: 1500 LER---QRMDLNNAVTFTVYSLGSRYVHPNN 1527
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 225 (84.3 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 68/202 (33%), Positives = 104/202 (51%)
Query: 271 YRMHPSISLFPNLQFYRNQILDGAN-VKSKSY-EKHYLPGTELGPYSFINIIGGSE-EFI 327
YR HPSI PN FY N++ A+ + S+ Y +LP P F ++G E E
Sbjct: 754 YRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPKRGF-PVIFHGVVGKDEREST 812
Query: 328 YHSCRNMVEVSVVIKILQKLY----KAWVGSKQKVSIGVVSPYTAQAVAIRK--KIGSEY 381
S N E+ ++ L+KL K + IG+++PY Q IR+ KI E
Sbjct: 813 SPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQVEKIRQAIKIHREL 872
Query: 382 ENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAGG-------SIGFISKPQRVNVALTR 433
++ G +KV S++ FQG E +II+STVR + +IGF+ +R NVA+TR
Sbjct: 873 KSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFNVAVTR 932
Query: 434 ARHCLWILGNERTLISSESIWG 455
A+ L ++GN ++ ++ IWG
Sbjct: 933 AKALLIMVGNP-IILRTDEIWG 953
Score = 134 (52.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 60/218 (27%), Positives = 98/218 (44%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHA-----VLIGDECQLPAMVASKISDEAGFGRSLFE 255
+ +DEA E E I + +AG+ +A VL GD QL ++ S + + G G SL E
Sbjct: 669 IFVDEAGHAVEPE--IVISVAGLLNAETGQLVLAGDPKQLGPILRSPFAIKYGLGLSLLE 726
Query: 256 RLTSLNH----------SKHLLNV--QYRMHPSISLFPNLQFYRNQILDGAN-VKSKSY- 301
RL + N ++++ + YR HPSI PN FY N++ A+ + S+ Y
Sbjct: 727 RLMTQNELYQKGDTGFDNRYVTKLLQNYRSHPSILKVPNELFYDNELKACADEISSRQYC 786
Query: 302 EKHYLPGTELGPYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSI 360
+LP P F ++G E E S N E+ ++ L+KL ++ K I
Sbjct: 787 TWEHLPKRGF-PVIFHGVVGKDERESTSPSFFNTSEIDKIMDYLKKLLL----TQAKKGI 841
Query: 361 GVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQ 398
+SP +A +K + ++KS+ G +
Sbjct: 842 AKISPKDIGIIAPYRKQVEKIRQAIKIHRELKSLSGIE 879
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 64/198 (32%), Positives = 98/198 (49%)
Query: 316 FINIIGGSEEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAI 373
F + G EE S N E + V KI KL KA G+K IG+++PY Q +
Sbjct: 20 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYL 76
Query: 374 RK--KIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVAL 431
+ + K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 77 VQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVAL 136
Query: 432 TRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIGKELVEIG 491
TRAR+ + I+GN + L S + +W L+ K ++ + N+ ++ + K +
Sbjct: 137 TRARYGVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEGPLN-NLRESLMQFSKPRKLVN 194
Query: 492 AESLTSTNQRGKTTLCYD 509
+ R TT YD
Sbjct: 195 T---VNPGARFMTTAMYD 209
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 149 (57.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 42/133 (31%), Positives = 70/133 (52%)
Query: 313 PYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
P F+N + E+ N+ E +++ + KA G K IG+++PY Q
Sbjct: 859 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 915
Query: 371 VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNV 429
I + + + V+V ++D +QG ++ II++S VR N G IG + K +R+NV
Sbjct: 916 KIINDLL---FHSSIRM-VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 971
Query: 430 ALTRARHCLWILG 442
A+TRA+H L +LG
Sbjct: 972 AITRAKHKLILLG 984
Score = 125 (49.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 722 KTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFK 779
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL ++ L VQYRM+ I N Y ++ G++
Sbjct: 780 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 819
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 149 (57.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 42/133 (31%), Positives = 70/133 (52%)
Query: 313 PYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
P F+N + E+ N+ E +++ + KA G K IG+++PY Q
Sbjct: 890 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 946
Query: 371 VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNV 429
I + + + V+V ++D +QG ++ II++S VR N G IG + K +R+NV
Sbjct: 947 KIINDLL---FHSSIRM-VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 1002
Query: 430 ALTRARHCLWILG 442
A+TRA+H L +LG
Sbjct: 1003 AITRAKHKLILLG 1015
Score = 125 (49.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 753 KTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFK 810
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL ++ L VQYRM+ I N Y ++ G++
Sbjct: 811 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 850
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 158 (60.7 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 389 VKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLI 448
+K+ +ID +QG E DI+I + R N G IGF+S PQR+NV L+RAR L ++GN T
Sbjct: 960 IKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMIGNSNTFT 1019
Query: 449 SS---ESIW 454
+S + +W
Sbjct: 1020 NSRKGKEVW 1028
Score = 123 (48.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 50/187 (26%), Positives = 89/187 (47%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVASKISDEAGFG----RSLFE 255
++++EA ++ ES L + ++IGD QL P + +S E G G RSLFE
Sbjct: 745 VLLEEAGEILESHVLTALG-SHTKQLIMIGDHQQLRPKINNYALSVEKGSGYDLNRSLFE 803
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSK----SYEKHYLPGTEL 311
RL + L Q+RM P IS Y + +LDG K++ + +
Sbjct: 804 RLVESGYPHSTLAKQHRMAPEISALVRRLTYPD-LLDGDKTKTRLAPRGLQNRVVFIDHS 862
Query: 312 GPYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
P F++ + + + S +N EV +V+KI++ L + G+ + V +++PY Q
Sbjct: 863 QPEGFLHGVSDRDGDGGKGSKQNTFEVKLVLKIVKYLGQQGYGTDKLV---ILTPYLGQL 919
Query: 371 VAIRKKI 377
+R+++
Sbjct: 920 HLLREEL 926
Score = 38 (18.4 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 133 YLLQLHQRRSECLSVLRNLWNSLDELNL 160
YL QLH R E + N LD +L
Sbjct: 915 YLGQLHLLREELRKDTDPVLNDLDSYDL 942
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 154 (59.3 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 333 NMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGF-TVKV 391
N E +V ++ L KA G + IGV++PY Q K+ S D F ++V
Sbjct: 1231 NHTEAVLVQGLVTLLLKA--GCRA-CDIGVIAPYRQQL-----KVISSLLQGDAFKALEV 1282
Query: 392 KSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNVALTRARHCLWILGNERTL 447
++D +QG ++ +II+S VR NA G++G + + +R+NVA+TRA+H L +LG+ TL
Sbjct: 1283 NTVDKYQGRDKSVIIVSFVRSNAEGNLGELLQDWRRLNVAITRAKHKLLMLGSAPTL 1339
Score = 128 (50.1 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 199 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLT 258
+F ++DEA+Q+ + PL A VL+GD QLP +V + + G SLF+RL
Sbjct: 1074 DFCIVDEASQISQPVCIGPLFYA--QRFVLVGDHQQLPPIVQNAEARSLGMDESLFKRLE 1131
Query: 259 SLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGA 294
+ LNVQYRM+ +I N Y ++ G+
Sbjct: 1132 HHRDAVVQLNVQYRMNSAIMSLSNALMYEGRLECGS 1167
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 36/163 (22%), Positives = 62/163 (38%)
Query: 203 IDEAAQLKESESTIPLQLAGINHAVLIG---DECQLPAMVASKISDEAGFGRSLF-ERLT 258
++E QL E + G+ H + D C + AS+IS G + +R
Sbjct: 1043 LEELEQLYSRELIVATTCMGVKHPIFSRRRFDFCIVDE--ASQISQPVCIGPLFYAQRFV 1100
Query: 259 SLNHSKHL----LNVQYR-MHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGP 313
+ + L N + R + SLF L+ +R+ ++ NV+ + L
Sbjct: 1101 LVGDHQQLPPIVQNAEARSLGMDESLFKRLEHHRDAVVQ-LNVQYRMNSAIMSLSNAL-M 1158
Query: 314 YSFINIIGGSEE----FIYHSCRNMVEVSVVIKILQKLYKAWV 352
Y + GSE+ + R E + + + Q Y AWV
Sbjct: 1159 YEG-RLECGSEKTANAVLQLPSRAQAEEELELYVCQPQYSAWV 1200
Score = 39 (18.8 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 106 NVVSEELEKLFSHSVDEGISSAFV 129
N SE L+K FS S ++ I + V
Sbjct: 175 NKYSETLQKAFSKSPEKKIKTESV 198
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 162 (62.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 64/202 (31%), Positives = 94/202 (46%)
Query: 271 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTELGPYSFINIIGGSEEF 326
YR H ++ P+ FY ++ D V S +EK LP P F + G
Sbjct: 337 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLIFHGVRGNEARE 393
Query: 327 ----IYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYE 382
+ S V+V +L + + V SK IGV++PY Q +KI
Sbjct: 394 GRSPSWFSPAEAVQVMRYCCLLARNVSSQVSSKD---IGVITPYRKQV----EKIKILLR 446
Query: 383 NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGS------IGFISKPQRVNVALTRARH 436
N D +KV S++ FQG E +I+ISTVR N +GF+S +R NVA+TR +
Sbjct: 447 NVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKA 506
Query: 437 CLWILGNERTLISSESIWGALV 458
L +LGN L+ + +GAL+
Sbjct: 507 LLIVLGNPHVLVR-DPCFGALL 527
Score = 101 (40.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 176 RASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQL-AGIN-HAVLIGD 231
R + +T SS+ + + ++ F + +DEA Q E E IPL L + IN VL GD
Sbjct: 221 RFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGD 280
Query: 232 ECQLPAMVASKISDEAGFGRSLFERLTS 259
QL ++ S+++ G S+ ERL S
Sbjct: 281 PMQLGPVIKSRLAMAYGLNVSMLERLMS 308
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 219 (82.2 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 79/272 (29%), Positives = 128/272 (47%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 754 KIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 811
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDG----AN----------VKSK-- 299
RL + L VQYRM+ I N Y ++ G AN VK +
Sbjct: 812 RLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELE 871
Query: 300 ---SYEKH-YLPGT--ELGPYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAW 351
Y + +L G P F+N + E+ N+ E +++ + KA
Sbjct: 872 FYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKA- 930
Query: 352 VGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G IG+++PY Q I + G V+V ++D +QG ++ I+++S VR
Sbjct: 931 -GCSPS-DIGIIAPYRQQLKIINDLLARSI----GM-VEVNTVDKYQGRDKSIVLVSFVR 983
Query: 412 CNAGGSIGFISKP-QRVNVALTRARHCLWILG 442
N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 984 SNKDGTVGELLKDWRRLNVAITRAKHKLILLG 1015
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 219 (82.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 79/272 (29%), Positives = 128/272 (47%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 840 KIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 897
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDG----AN----------VKSK-- 299
RL + L VQYRM+ I N Y ++ G AN VK +
Sbjct: 898 RLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELE 957
Query: 300 ---SYEKH-YLPGT--ELGPYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAW 351
Y + +L G P F+N + E+ N+ E +++ + KA
Sbjct: 958 FYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKA- 1016
Query: 352 VGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G IG+++PY Q I + G V+V ++D +QG ++ I+++S VR
Sbjct: 1017 -GCSPS-DIGIIAPYRQQLKIINDLLARSI----GM-VEVNTVDKYQGRDKSIVLVSFVR 1069
Query: 412 CNAGGSIGFISKP-QRVNVALTRARHCLWILG 442
N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 1070 SNKDGTVGELLKDWRRLNVAITRAKHKLILLG 1101
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 164 (62.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 65/202 (32%), Positives = 94/202 (46%)
Query: 271 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTELGPYSFINIIGGSEEF 326
YR H ++ P+ FY ++ D V S +EK LP P F + G
Sbjct: 974 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLIFHGVRGNEARE 1030
Query: 327 ----IYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYE 382
+ S V+V +L + + V SK IGV++PY Q +KI
Sbjct: 1031 GRSPSWFSPAEAVQVMRYCCLLARSVSSQVSSKD---IGVITPYRKQV----EKIKILLR 1083
Query: 383 NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGS------IGFISKPQRVNVALTRARH 436
N D +KV S++ FQG E +I+ISTVR N +GF+S +R NVA+TR +
Sbjct: 1084 NVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKA 1143
Query: 437 CLWILGNERTLISSESIWGALV 458
L ILGN L+ + +GAL+
Sbjct: 1144 LLIILGNPHVLVR-DPCFGALL 1164
Score = 101 (40.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 176 RASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQL-AGIN-HAVLIGD 231
R + +T SS+ + + ++ F + +DEA Q E E IPL L + IN VL GD
Sbjct: 858 RFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGD 917
Query: 232 ECQLPAMVASKISDEAGFGRSLFERLTS 259
QL ++ S+++ G S+ ERL S
Sbjct: 918 PMQLGPVIKSRLAMAYGLNVSMLERLMS 945
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 212 (79.7 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 68/213 (31%), Positives = 109/213 (51%)
Query: 263 SKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYEK-HYLPGTELGPYSFINII 320
SK ++N YR HP I PN FY ++ A+ + S Y +LP P F +
Sbjct: 753 SKLIMN--YRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGF-PVIFHGVP 809
Query: 321 GGSE-EFIYHSCRNMVEVSVVIKILQKLY----KAWVGSKQKVSIGVVSPYTAQAVAIRK 375
G E E S N+ E+++++ L+KL K + IG+++PY Q I++
Sbjct: 810 GKDERESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKR 869
Query: 376 KIGSEYENKD--GF-TVKVKSIDGFQGGEEDIIIISTVRCNAGG-------SIGFISKPQ 425
I ++ + +D G +KV S++ FQG E +I++STVR + +IGF+ +
Sbjct: 870 AIDADKDFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKNEK 929
Query: 426 RVNVALTRARHCLWILGNERTLISSESIWGALV 458
R NVA+TRA+ L ++GN L + ES WG +
Sbjct: 930 RFNVAVTRAKSLLIMVGNPMILRTDES-WGRFI 961
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 213 (80.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 79/266 (29%), Positives = 132/266 (49%)
Query: 203 IDEAAQLKESEST--IPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLT-- 258
+DEAA E+E I L+ + +L GD QL ++ S+ ++E G G +LFERL
Sbjct: 692 VDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQR 751
Query: 259 ---------SLNHSKHLLNVQ-YRMHPSI-SLFPNLQFYRNQILDGA--NVKSKSYEKHY 305
S N S ++ +R HP I SL+ N+ +Y + A + + + Y
Sbjct: 752 KCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNM-YYEGHLRTEAPMEIVCRFHNWFY 810
Query: 306 LPGTELGPYSFINIIGGS--EEFIYHSCRNMVEVSVVIKILQKL-YKAWVGSKQ-KVSIG 361
LP P F ++ G + + C N E+ VV+ ++ L Y G K + IG
Sbjct: 811 LPNATF-PIMFHSVFGTTMNTKSSVSLCNNK-EIDVVMDYVKDLMYFGLNGEKLLQTDIG 868
Query: 362 VVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFI 421
++SPY Q I++++ ++ + S++ FQG E+ +II+S VR + +GF+
Sbjct: 869 IISPYKNQYQRIQEQLNM----RNWSQIDCGSVELFQGKEKHVIIVSFVR-SFTPKLGFL 923
Query: 422 SKPQRVNVALTRARHCLWILGNERTL 447
+ +R+NV L+R L ++GN RTL
Sbjct: 924 NNERRLNVLLSRPISLLILIGNPRTL 949
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 218 (81.8 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 81/267 (30%), Positives = 129/267 (48%)
Query: 199 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLT 258
+F ++DEA+Q+ + PL A VL+GD QLP +V ++ + G SLF+RL
Sbjct: 763 DFCIVDEASQISQPVCVGPLFYA--RRFVLVGDHQQLPPIVQNQEARSLGMDESLFKRLE 820
Query: 259 SLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSY-EKHYLPGT--ELGPYS 315
+ LNVQYRM+ I N Y ++ G+ + S LP ELG +
Sbjct: 821 LHRDAVVQLNVQYRMNRQIMSLSNSLMYEGRLECGSERTATSLITLPLLPSVLPELGSLA 880
Query: 316 FINI-IGGSEEFIYHSCRNMVEVSVVIK----------ILQKLYKAWVGSKQKVS-IGVV 363
+I + S + C + + V + ++ KL + + K IGV+
Sbjct: 881 WIQATLLPSNPVCFLDCSAVPALETVEQGGISNHTEAALIHKLLLLLIKAGCKPGDIGVI 940
Query: 364 SPYTAQAVAIRKKIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAG-GSIGFI 421
+PY Q I S FT V+V ++D +QG ++ +I++S VR A G +G +
Sbjct: 941 APYRQQLRTI-----SGLLQASAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPLGEL 995
Query: 422 SKP-QRVNVALTRARHCLWILGNERTL 447
K +R+NVA+TRA+ L +LG+ TL
Sbjct: 996 LKDWRRLNVAITRAKSKLLMLGSATTL 1022
Score = 40 (19.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 112 LEKLFSHSVDEGISSAFVGKRYLLQLHQRRSEC-LSVLRNLWNSLDELNLPCTTSKLLLE 170
L +L H G+S+ L++ Q RS C S L +++ LD + + L+
Sbjct: 520 LFRLDGHEGAVGLSTHLTNLSRLMESSQGRSTCPFSALLSVF--LDNVGRVSDRLRELVV 577
Query: 171 DFCFKRASLFFSTASS 186
D R F S+ SS
Sbjct: 578 DL---RPPEFISSLSS 590
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 208 (78.3 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 83/268 (30%), Positives = 127/268 (47%)
Query: 201 LVIDEAAQLKESESTIPLQLAGIN-----HAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
+ IDEA E E+ I + GI H +L GD QL A++ S + G RSL E
Sbjct: 474 IFIDEAGASTEPEALIGIM--GIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLME 531
Query: 256 RLTSL---------NHSKHL---LNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 303
RL N+ ++ L YR HP I N +Y ++ A +
Sbjct: 532 RLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAA 591
Query: 304 HY--LPGTELGPYSFINIIG-GSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSI 360
++ L + P F G + E S N +E V+ +++L V ++ V
Sbjct: 592 NWSVLTNPQF-PIIFQATHGVTNREQNSTSSYNNLEAEVICWYVKRLINDRVVGQEDV-- 648
Query: 361 GVVSPYTAQAVAIRKKIGSE-YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIG 419
G+V+PYTAQ + K + S+ Y N V+V S++ +QG E+ III S V+ ++G
Sbjct: 649 GIVAPYTAQGKLVTKLLQSKGYPN-----VEVGSVETYQGREKTIIIASLVKSFT--NMG 701
Query: 420 FISKPQRVNVALTRARHCLWILGNERTL 447
F+ P+RVNV L+RA+ L ++GN TL
Sbjct: 702 FMCNPRRVNVLLSRAKALLILVGNPVTL 729
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 167 (63.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 64/199 (32%), Positives = 92/199 (46%)
Query: 271 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTELGPYSFINIIGG-SEE 325
YR H ++ P+ FY ++ D V S +EK LP P F + G + E
Sbjct: 970 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLVFHGVRGTEARE 1026
Query: 326 FIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD 385
S N E V++ L ++ IGV++PY Q +KI N
Sbjct: 1027 GRSPSWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQV----EKIKILLRNVG 1082
Query: 386 GFTVKVKSIDGFQGGEEDIIIISTVRCNAGGS------IGFISKPQRVNVALTRARHCLW 439
VKV S++ FQG E +IIISTVR N +GF+S +R NVA+TR + L
Sbjct: 1083 LAEVKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 1142
Query: 440 ILGNERTLISSESIWGALV 458
+LGN L+ + +GAL+
Sbjct: 1143 VLGNPHVLVRQDPCFGALL 1161
Score = 94 (38.1 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 176 RASLF---FSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQL-AGIN-HAVL 228
RAS F +T SS+ + + ++ +F + +DEA Q E E IPL L + I+ +L
Sbjct: 851 RASRFRVVITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLISDIDGQIIL 910
Query: 229 IGDECQLPAMVASKISDEAGFGRSLFERL 257
GD QL ++ S+++ G S+ ERL
Sbjct: 911 AGDPMQLGPVIKSRLAMAYGLNVSMLERL 939
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 133 (51.9 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 360 IGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIG 419
IG+++PY Q I + + + V+V ++D +QG ++ II++S VR N G IG
Sbjct: 879 IGIIAPYRQQLKIINDLL---FHSSIRM-VEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 934
Query: 420 FISKP-QRVNVALTRARHCLWILG 442
+ K +R+NVA+TRA+H L +LG
Sbjct: 935 ELLKDWRRLNVAITRAKHKLILLG 958
Score = 125 (49.1 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 726 KTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFK 783
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL ++ L VQYRM+ I N Y ++ G++
Sbjct: 784 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 823
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 163 (62.4 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 68/220 (30%), Positives = 103/220 (46%)
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKV-----SIGVVSPY 366
P F ++G E E S N E + V L++L A K K S+GV+SPY
Sbjct: 776 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLRQLL-APSSKKGKARLSPRSVGVISPY 834
Query: 367 TAQAVAIR---KKIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAGG------ 416
Q IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 835 RKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLD 894
Query: 417 -SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRN 475
++GF+ P+R NVA+TRA+ L ++GN L+ + W + K +
Sbjct: 895 FNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKTFLEFCKENGGYTGCPFP-- 951
Query: 476 VAKARLDIGKELVEIGAESLT-STN-QRGKTTLCYDKDGE 513
AK L G++L++ G L+ ST+ R L +++GE
Sbjct: 952 -AKLDLQQGQDLLQ-GLSKLSPSTSGPRRHQRLPQEREGE 989
Score = 93 (37.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 52/194 (26%), Positives = 82/194 (42%)
Query: 179 LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 228
+ +T ++ +L S + I + IDEA E ES + + L + VL
Sbjct: 619 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVL 678
Query: 229 IGDECQLPAMVASKISDEAGFGRSLFERLTSLN--HSK-----------HLLNVQYRMHP 275
GD QL ++ S ++ + G G SL ERL + N + K LL YR HP
Sbjct: 679 AGDPRQLGPVLRSPLAQKHGLGYSLLERLLTYNSLYKKGPNGYDPQFITKLLR-NYRSHP 737
Query: 276 SISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELG-PYSFINIIGGSE-EFIYHSCRN 333
+I PN +Y ++ A+V + + + G P F ++G E E S N
Sbjct: 738 TILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNSPSFFN 797
Query: 334 MVEVSVVIKILQKL 347
E + V L++L
Sbjct: 798 PEEAATVTSYLRQL 811
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 151 (58.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 57/191 (29%), Positives = 89/191 (46%)
Query: 266 LLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELG-PYSFINIIGG-S 323
L+N YR H ++ P+ FY ++ A+ S H+ G P F + G +
Sbjct: 975 LVN-NYRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEKLPRKGFPLIFHGVRGKET 1033
Query: 324 EEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYEN 383
E S N E V++ L K + IGV++PY Q I+ + S +
Sbjct: 1034 REGHSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQVEKIKFLLRS-IDL 1092
Query: 384 KDGFTVKVKSIDGFQGGEEDIIIISTVR------CNAGGSIGFISKPQRVNVALTRARHC 437
D +KV +++ FQG E + I+STVR +GF+S P+R NVA+TRA+
Sbjct: 1093 SD---IKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAITRAKAL 1149
Query: 438 LWILGNERTLI 448
L ++GN L+
Sbjct: 1150 LIVIGNPHLLV 1160
Score = 106 (42.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 179 LFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAG-IN-HAVLIGDECQ 234
+ +T SS+ + + +F +++DEA Q E ES IP+ L +N VL+GD Q
Sbjct: 866 IIITTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPESLIPIGLISEVNGQIVLVGDPKQ 925
Query: 235 LPAMVASKISDEAGFGRSLFERLTS 259
L ++ S+I+ G SL ERL S
Sbjct: 926 LGPLIKSRIAVAFGLNISLLERLIS 950
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 153 (58.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 35/116 (30%), Positives = 67/116 (57%)
Query: 333 NMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVK 392
N VE +V+++++ L V + + IGV++ Y +Q ++ K+ D V++
Sbjct: 1455 NPVEAQLVVQLVESLMTLGVPANE---IGVMTHYRSQLALLKHKLLRGKNTGDATAVEMH 1511
Query: 393 SIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNVALTRARHCLWILGNERTL 447
+ D FQG +++++++S VR N IG + + +R+NVA TRA+ L ++G+ TL
Sbjct: 1512 TADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRRINVAFTRAKTKLLVIGSRETL 1567
Score = 107 (42.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHA---VLIGDECQLPAMVASKISDEAGFGRS 252
+ ++ ++DEA+Q+ T+P+ L I A VL+GD QLP +V ++ + + G S
Sbjct: 1275 RTFDYCIVDEASQI-----TLPICLGPIRMARTFVLVGDHNQLPPLVQNEEARKGGLDVS 1329
Query: 253 LFERLTSLNHSKHLLNV--QYRMHPSISLFPNLQFYRNQILDG 293
LF +L S H ++N+ QYRM + N Y + G
Sbjct: 1330 LF-KLLSDTHPDSVVNLEHQYRMCEDVMALSNELIYEGHLKCG 1371
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 172 (65.6 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 55/174 (31%), Positives = 87/174 (50%)
Query: 333 NMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVK 392
N EV V + LY+A V + Q IG+++PY Q +R S + D K+
Sbjct: 1107 NPQEVREVFLMTIALYRANVTADQ---IGIITPYQKQVKMLR----SMFIGTDVVMPKIG 1159
Query: 393 SIDGFQGGEEDIIIISTVRCN-------AGGSIGFISKPQRVNVALTRARHCLWILGNER 445
S++ FQG E DII+ISTVR + A S+GF+ +R+NVA++RAR + I GN
Sbjct: 1160 SVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFGNPH 1219
Query: 446 TLISSESIWGALVCDAKARQCFFNADEDRNVAKARLDIGKELVEIGAESLTSTN 499
L++ + W L+ +F D + V + ++ +E SL +T+
Sbjct: 1220 -LLAVDECWRQLILFCVKNNAYFGCDLPQMVINQKDEV-PVCLETFVPSLNTTD 1271
Score = 92 (37.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHA--VLIGDECQLPAMVASKISDEAGFGRSLFERLT 258
++ DEA Q E E+ +P+ + + VL GD QL ++V S+I+ + GF S ERL
Sbjct: 945 VLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERL- 1003
Query: 259 SLNHSKHLLNVQ 270
L S + ++Q
Sbjct: 1004 -LERSPYRKDLQ 1014
Score = 37 (18.1 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 112 LEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRN 150
+E+ +S + E +S R+ L LH EC RN
Sbjct: 600 IEQHYSF-LTEPLSIKTYMHRFRLLLHLEEIECFVNFRN 637
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 162 (62.1 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 66/219 (30%), Positives = 104/219 (47%)
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYK-AWVGSKQKVS---IGVVSPYT 367
P F ++G E E S N E + V L++L + K ++S +GV+SPY
Sbjct: 776 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYR 835
Query: 368 AQAVAIR---KKIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAGG------- 416
Q IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 836 KQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 895
Query: 417 SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRNV 476
++GF+ P+R NVA+TRA+ L ++GN L+ + W + K +
Sbjct: 896 NLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKTFLEFCKENGGYTGCPFP--- 951
Query: 477 AKARLDIGKELVEIGAESLT-STN-QRGKTTLCYDKDGE 513
AK L G++L++ G L+ ST+ R L +++GE
Sbjct: 952 AKLDLQQGQDLLQ-GLSKLSPSTSGPRRHQNLPQEREGE 989
Score = 89 (36.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 52/194 (26%), Positives = 82/194 (42%)
Query: 179 LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 228
+ +T ++ +L S + I + IDEA E ES + + L + VL
Sbjct: 619 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVL 678
Query: 229 IGDECQLPAMVASKISDEAGFGRSLFERLTSLN--HSK-----------HLLNVQYRMHP 275
GD QL ++ S ++ + G G SL ERL + N + K LL YR HP
Sbjct: 679 AGDPRQLGPVLRSPLALKHGLGYSLLERLLAYNSLYKKGPNGYDPQFITKLLR-NYRSHP 737
Query: 276 SISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELG-PYSFINIIGGSE-EFIYHSCRN 333
+I PN +Y ++ A+V + + + G P F ++G E E S N
Sbjct: 738 TILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNSPSFFN 797
Query: 334 MVEVSVVIKILQKL 347
E + V L++L
Sbjct: 798 PEEAATVTSYLKQL 811
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 199 (75.1 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 87/269 (32%), Positives = 121/269 (44%)
Query: 227 VLIGDECQLPAMVASKISDEAGFGRSLFERL--TSL--------NH---SKHLLNVQYRM 273
VL GD QL +V S+++ G G SL ERL SL N +K L N YR
Sbjct: 839 VLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYN--YRS 896
Query: 274 HPSISLFPNLQFYRNQILDGANVKSKSYEKHY--LPGTELGPYSFINIIGGS-EEFIYHS 330
H ++ P+ FY ++ A + H+ LP T P F + G E S
Sbjct: 897 HEALLDLPSRLFYAGELCVRAQRAAVDSLCHWNKLP-TRGFPLIFHGVRGSEMREGCNPS 955
Query: 331 CRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGF-TV 389
N E V+ +L K IGV++PY Q IR + + G V
Sbjct: 956 WFNPAEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLL-----QRVGLGEV 1010
Query: 390 KVKSIDGFQGGEEDIIIISTVRCNAG-------GSIGFISKPQRVNVALTRARHCLWILG 442
KV S++ FQG E I+I+STVR N +GF+S P+R NVA+TRA+ L ++G
Sbjct: 1011 KVGSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAKALLIVIG 1070
Query: 443 NERTLISSESIWGALVCDAKARQCFFNAD 471
N LI E + AL+ + + F D
Sbjct: 1071 NPHVLIK-EPCFSALLQYSYDNRAFIGCD 1098
Score = 176 (67.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 81/253 (32%), Positives = 113/253 (44%)
Query: 182 STASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAG--INHAVLIGDECQLPA 237
ST SS+ + + ++ +F + +DEA Q E E+ IPL L VL GD QL
Sbjct: 790 STCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPKQLGP 849
Query: 238 MVASKISDEAGFGRSLFERL--TSL--------NH---SKHLLNVQYRMHPSISLFPNLQ 284
+V S+++ G G SL ERL SL N +K L N YR H ++ P+
Sbjct: 850 VVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYN--YRSHEALLDLPSRL 907
Query: 285 FYRNQILDGANVKSKSYEKHY--LPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVI 341
FY ++ A + H+ LP T P F + G E S N E V+
Sbjct: 908 FYAGELCVRAQRAAVDSLCHWNKLP-TRGFPLIFHGVRGSEMREGCNPSWFNPAEAVQVM 966
Query: 342 KILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGF-TVKVKSIDGFQGG 400
+L K IGV++PY Q IR + + G VKV S++ FQG
Sbjct: 967 MYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLL-----QRVGLGEVKVGSVEEFQGQ 1021
Query: 401 EEDIIIISTVRCN 413
E I+I+STVR N
Sbjct: 1022 EFLIMILSTVRSN 1034
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 197 (74.4 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 84/294 (28%), Positives = 129/294 (43%)
Query: 175 KRASLFFSTASSSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAGINHA---- 226
K A + T++ + + EI L F +V++EAAQ+ E ES IP L +
Sbjct: 1034 KEARIIAMTSTHA-AMRRQEIADLGFHYDNIVMEEAAQITEVESFIPTALQNMKEGQLPL 1092
Query: 227 ---VLIGDECQLPAMVAS-KISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPN 282
VL GD Q ++ + A F +SLF RL L L+ Q R PSI+
Sbjct: 1093 KRIVLCGDHLQNSPIIQNLAFRQYAHFEQSLFLRLIRLGVPAITLDQQGRARPSIA---E 1149
Query: 283 LQFYRNQILDGANVKSKSYE-KHYLPGTELGPYSFINIIG----GSEEFIYHSCRNMVEV 337
L +R Q L + ++ E K G + Y FIN+ G E H +N+ E
Sbjct: 1150 LFRWRYQNLGNLPIVEQAPEFKQANAGFQF-EYQFINVPDYQGTGEREPTPHFVQNLGEA 1208
Query: 338 SVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVK--VKSID 395
+ I Q Y +G I +++ Y Q I+ + F + V ++D
Sbjct: 1209 EYAVAIFQ--YMRLLGYPAS-KISILATYAGQTALIKDVLNHRCSKNTLFGMPKIVTTVD 1265
Query: 396 GFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGNERTLIS 449
+QG + D II+S R ++G++ +R+ VAL+RAR L+ILG S
Sbjct: 1266 RYQGEQNDYIILSLTRTR---TVGYLRDVRRLTVALSRARLGLYILGRREVFES 1316
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 196 (74.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 73/240 (30%), Positives = 116/240 (48%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLA-GINHAVLIGDECQLPAMV 239
T S+S L ++++P F +++DEAAQ E E+ +PL LA VL GD QL V
Sbjct: 764 TLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLALAVKSTRVVLAGDHMQLSPFV 823
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL S++ LL YR H +I + + FY +++ A+
Sbjct: 824 YSEFARERNLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSDLFYEGKLM--AS 881
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K ++ Y P +F G +E + N EV +++ ++++ K W
Sbjct: 882 GKQPPHKDFY-------PLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVS 934
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G ++ SIGVVSPY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 935 WGKLEEGSIGVVSPYADQVFRIR----AELRKKRMSEVSVERVLNVQGKQFRVLFLSTVR 990
Score = 52 (23.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1019 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1049
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 127 (49.8 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 11 KTFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 68
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
RL ++ L VQYRM+ I N Y ++ G++
Sbjct: 69 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 108
Score = 97 (39.2 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 313 PYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQA 370
P F+N + E+ N+ E +V+ + KA G +IG+++PY Q
Sbjct: 148 PVCFLNTDKVPAPEQVEKGGVSNITEAKLVVYLTSIFVKA--GCNP-CNIGIIAPYRQQL 204
Query: 371 VAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSI 418
I + + G V+V ++D +QG ++ II++S VR N G++
Sbjct: 205 KVINDLLS---HSSVGM-VEVNTVDKYQGRDKSIILVSFVRSNRDGTV 248
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 127 (49.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 53/156 (33%), Positives = 85/156 (54%)
Query: 360 IGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNA---GG 416
IGV++ Y AQ + + KKI ++ DG +++ + D FQG ++ IIIS VR N+ GG
Sbjct: 1361 IGVMTLYRAQ-LRLLKKIFNK-NVYDG--LEILTADQFQGRDKKCIIISMVRRNSQLNGG 1416
Query: 417 SIGFISKPQRVNVALTRARHCLWILGNERTL-----ISS------ESIWGALVC-DAKAR 464
++ + + +RVNVA+TRA+ L I+G++ T+ I S E W +C DA +
Sbjct: 1417 AL--LKELRRVNVAMTRAKSKLIIIGSKSTIGSVPEIKSFVNLLEERNWVYTMCKDALYK 1474
Query: 465 QCFFNADEDRNVAKARLDIGKELVEIGAESLTSTNQ 500
F D + +AR GK GA+ +TS ++
Sbjct: 1475 YKF--PDRSNAIDEARKGCGKRT---GAKPITSKSK 1505
Score = 119 (46.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 34/116 (29%), Positives = 59/116 (50%)
Query: 190 LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGF 249
L ++ K +++++DEA+Q+ + PL+ N +++GD QLP +V + + G
Sbjct: 1172 LFTLNEKDFDYVILDEASQISMPVALGPLRYG--NRFIMVGDHYQLPPLVKNDAARLGGL 1229
Query: 250 GRSLFERLTSLNHSKHL--LNVQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYE 302
SLF+ H + + L +QYRM I N Y N++ G N V ++S E
Sbjct: 1230 EESLFKTFCE-KHPESVAELTLQYRMCGDIVTLSNFLIYDNKLKCGNNEVFAQSLE 1284
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 186 (70.5 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 72/240 (30%), Positives = 115/240 (47%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 831
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 889
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 890 GKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 942
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 943 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 998
Score = 52 (23.4 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1057
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 188 (71.2 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 73/266 (27%), Positives = 117/266 (43%)
Query: 228 LIGDECQLPAMVASKISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYR 287
LI +C + + + E G SLF+RL + L VQYRM+ I N Y
Sbjct: 780 LIHHQCFKGCVKSVSLVRELGMSESLFKRLERNQEAVVQLTVQYRMNSQIMALSNKLVYE 839
Query: 288 -----------NQILDGANVKSKSYEKHYLPGTEL----------GPYSFINI--IGGSE 324
N ++ ++K+ E + E P F+N I E
Sbjct: 840 GRLECASDRVSNAVVKLPHIKTLLLELEFRESQESMWIKDVLEPSNPVCFLNTEKIPALE 899
Query: 325 EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENK 384
N +E +V + + KA G + IG+++PY Q K I + + +
Sbjct: 900 TEEKGGISNWIEAKLVFCLTKLFLKA--GCRPS-DIGIIAPYRQQL----KVISNYFNSL 952
Query: 385 DGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNVALTRARHCLWILGN 443
V+V ++D +QG ++ +II+S VR N G +G + K +R+NVALTRA+H L +LG
Sbjct: 953 SASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGC 1012
Query: 444 ERTLISSESIWGALVCDAKARQCFFN 469
TL S L+C K++ ++
Sbjct: 1013 VPTL-SRFLCLEQLICHLKSKNHIYD 1037
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 196 (74.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 88/321 (27%), Positives = 151/321 (47%)
Query: 148 LRNLWNSLDE------LNLPCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF- 200
+ +++N L+E L SK LL K A + T + + L E+ L F
Sbjct: 1017 ISDIFNELEEFRAFELLRTGLDRSKYLL----VKEAKIIAMTCTHA-ALKRKELVNLGFR 1071
Query: 201 ---LVIDEAAQLKESESTIPLQLA----GINHA---VLIGDECQLPAMVASKISDE-AGF 249
++++E+AQ+ E E+ IPL L G+N ++IGD QLP ++ + + +
Sbjct: 1072 YDNILMEESAQILEIETFIPLLLQNPLDGLNRLKRWIMIGDHHQLPPVIKNMAFQKYSNM 1131
Query: 250 GRSLFERLTSLNHSKHLLNVQYRMHPSI-SLFPNLQFYRNQILDGANVKSKSYEKHYLPG 308
+SLF RL L L+ Q R SI SL+ ++ ++ D ++ + K PG
Sbjct: 1132 EQSLFTRLVRLGVPTVDLDGQGRARASICSLY---KWRYKKLEDLQHIFERDEYKQANPG 1188
Query: 309 TELGPYSFINI-----IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVV 363
+ Y IN+ +G SE Y +N+ E ++ + +Y +G I ++
Sbjct: 1189 F-VHDYQLINVEDFKGVGESEPNPYFY-QNLAEAEYIVAVY--MYMRLLGYPA-AKISIL 1243
Query: 364 SPYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFI 421
+ Y Q IR I + N G+ K+ ++D +QG + D I+IS VR A +G +
Sbjct: 1244 TTYNGQKHLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKA---VGHL 1300
Query: 422 SKPQRVNVALTRARHCLWILG 442
+R+ VA++RAR L++ G
Sbjct: 1301 RDVRRLVVAMSRARLGLYVFG 1321
Score = 42 (19.8 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 5 LEDCVSQYHIYVE-KLEEREDCNVNQSEEKECRKETEGSKGECKPFLKYVK 54
LE QY++ E +E R+ E+ +KE++G E KP K K
Sbjct: 738 LEASFPQYNLKCEVPVENRQPPFRLIFEDVPIQKESDGEDPEEKPEEKLTK 788
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 188 (71.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 72/240 (30%), Positives = 115/240 (47%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 760 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFV 819
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 820 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 877
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 878 GKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 930
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 931 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVSVERVLNVQGKQFRVLFLSTVR 986
Score = 52 (23.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1015 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1045
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 188 (71.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 73/240 (30%), Positives = 115/240 (47%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T S+S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLSTSQYLCQLDLEPGFFTHVLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 888
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 889 GKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 941
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 942 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 997
Score = 52 (23.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPVALCS 1056
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 186 (70.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 72/240 (30%), Positives = 115/240 (47%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 830
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 888
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 889 GKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 941
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 942 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 997
Score = 52 (23.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 186 (70.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 72/240 (30%), Positives = 115/240 (47%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 831
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 889
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 890 GKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 942
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 943 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 998
Score = 52 (23.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1057
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 186 (70.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 72/240 (30%), Positives = 115/240 (47%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 888
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 889 GKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 941
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 942 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 997
Score = 52 (23.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 186 (70.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 72/240 (30%), Positives = 115/240 (47%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 888
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 889 GKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 941
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 942 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 997
Score = 52 (23.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 186 (70.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 72/240 (30%), Positives = 115/240 (47%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 831
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 889
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 890 GKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 942
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 943 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 998
Score = 52 (23.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPVALCS 1057
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 173 (66.0 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 70/233 (30%), Positives = 112/233 (48%)
Query: 222 GINHAVLIGDECQLPAMVASK-ISDEAGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLF 280
G+ +LIGD QLP +V ++ ++ + F +SLF RL L L+ Q R PSIS
Sbjct: 1194 GLKRVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHITLDRQGRSRPSISEL 1253
Query: 281 PNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINI-------IGGSEEFIYHSCRN 333
+ + Y+ + D VK + K PG Y IN+ +G SE Y +N
Sbjct: 1254 FSWK-YKG-LQDLPLVKEQLQFKLANPGLAYD-YQLINVDESDGYGVGESEPTPYFY-QN 1309
Query: 334 MVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD------GF 387
+ E ++ + Q Y +G + I V++ Y Q +R ++ +D G
Sbjct: 1310 LGEAEYIVAMFQ--YLIAIGYPSE-KITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYGL 1366
Query: 388 TVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
+K+ +ID +QG + DII++S VR G I +R+ VA++RAR L+I
Sbjct: 1367 PLKITTIDKYQGQQNDIILLSLVRTK---QYGHIRDVRRLIVAMSRARLGLYI 1416
Score = 61 (26.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 27/95 (28%), Positives = 42/95 (44%)
Query: 138 HQRRSECLSVLRNLWNSLDEL--NLP-CTTSKLLLE-----DFCFKRASLFFSTASSSYK 189
HQ L LWN + E+ L C +LL ++ + S + +
Sbjct: 1070 HQSLLNIKKNLIELWNYIKEIFKELEECKVFELLKSPNDRYNYLLLKQSKIVAMTCTHAA 1129
Query: 190 LHSVEIKPLNF----LVIDEAAQLKESESTIPLQL 220
L E+ L F L+++E+AQ+ + ES IPLQL
Sbjct: 1130 LKRNELLRLGFKFDNLLMEESAQISDIESFIPLQL 1164
Score = 48 (22.0 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 24/75 (32%), Positives = 34/75 (45%)
Query: 141 RSECLSVLRN-LWNSLDELNLPCTTSKLLLEDFCFKRASLFFSTAS--SSYKLHSVEIKP 197
R+ECL ++ +W L S+ L E K+ LF S+ +S+EIK
Sbjct: 198 RNECLKIVSYPIWLHLSSGRFQ-QESQSLSEPL-EKKLRLFKKKIEKLSNNNSNSIEIKY 255
Query: 198 LNFLVIDEAAQLKES 212
NFL +D Q ES
Sbjct: 256 SNFL-LDLMKQFIES 269
Score = 39 (18.8 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 142 SECLSVLRNLWNSLDE 157
S C +R+ WNS+ E
Sbjct: 572 SSCKPHIRDEWNSIKE 587
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 181 (68.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/252 (28%), Positives = 115/252 (45%)
Query: 191 HSVEI-KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGF 249
H + + K +F ++DEA+Q+ + PL + VL+GD QLP +V + + + G
Sbjct: 766 HPIFVQKQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGM 823
Query: 250 GRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGA-----------NVK- 297
SLF+RL ++ L VQYRM+ I N Y ++ G+ N+K
Sbjct: 824 SESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKM 883
Query: 298 --------SKSYEKHYLPGTELGPYSFINI--IGGSEEFIYHSCRNMVEVSVVIKILQKL 347
SK++ K L + P F+N + E N+ E +V +
Sbjct: 884 LKLEFADASKTWLKEVLEPDK--PVCFLNTEKVPAPEHTEKGGVCNVTEAKLVFFLTTLF 941
Query: 348 YKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIII 407
KA G + IG++SPY Q I + EN+ V+V +ID +QG ++ III+
Sbjct: 942 IKA--GCRPS-DIGIISPYRHQLKVITDLMARLKENR----VEVNTIDKYQGRDKSIIIV 994
Query: 408 STVRCNAGGSIG 419
S VR + ++G
Sbjct: 995 SFVRNSNDENLG 1006
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 184 (69.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 86/298 (28%), Positives = 136/298 (45%)
Query: 183 TASSSYKLHSVEI-KPL-NFLVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T S S +L ++ + K L + +DEAAQ E E+ +PL LA + VL GD Q+ +
Sbjct: 934 TLSISMELATLGLPKGLFTHIFLDEAAQAMECEAIMPLALANDSTRIVLAGDHMQMSPEL 993
Query: 240 ASKISDEAGFGRSLFERLTSLNHS----KHLLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S + E SL ERL S K LL YR H +I F + FY +++ A+
Sbjct: 994 FSAFAKERKLHISLLERLYDHYPSNFPCKILLCENYRAHEAIIRFTSELFYEQKLV--AS 1051
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K +++ Y P +F G ++ + N EV V++ + +L K W
Sbjct: 1052 GKQPRHDRFY-------PLTFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSA 1104
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIG+++PY+ Q IR SE + + V+ + QG + + +STVR
Sbjct: 1105 WGKLNDTSIGIMTPYSDQVFRIR----SELRKRRMGGISVERVLNVQGKQFRAVFLSTVR 1160
Query: 412 ----C----NAGGSI------------GFISKPQRVNVALTRARHCLWILGNERTLIS 449
C +A GS GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1161 TRRTCMPQGSAPGSASTTSIGDADADYGFLSNSKLLNTAITRAQSLVAVVGDPVALCS 1218
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 175 (66.7 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 70/291 (24%), Positives = 132/291 (45%)
Query: 270 QYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFI--NIIGGSEE-F 326
+Y +H ++ P + +RN + D + S E+ E ++ N I +++ F
Sbjct: 332 EYSLHTILN--PQPKKFRN-LFDPLVLIDTSLERDVEKRLETYEHAVFDTNSINKTKQGF 388
Query: 327 IYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK---KIGSEYEN 383
Y N+ E + I Q+L K V Q I +++PY Q + K + G+E
Sbjct: 389 SY---ANLAEAKIAIGHYQRLLKYGV---QPSDIAIITPYKGQTSLVTKLMEEFGAETGY 442
Query: 384 KDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWILGN 443
D + ++D QG E +++I + VR N ++GF+S+ +R+NV +TRA+ +GN
Sbjct: 443 TDFVQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRLNVVITRAKRHFMFIGN 502
Query: 444 ERTLISS--ESIWGALVCDAKARQCFF--NA-DEDRNVAK-ARLDIGKELVEIGAESLTS 497
L S + I C A++ F NA ED NV + G++L +
Sbjct: 503 GYLLAESKKDEIRKLYDCFKNAKRRFHPNNAFGEDGNVTDYVSNNFGQDLESF----MNY 558
Query: 498 TNQRGKTTLC--YDKDGETYREERSTATDSEAAADPMFNSTLNRLTLTFRK 546
+N C ++++G YR +++ A + M T++++ +++
Sbjct: 559 SNDEEMINWCKRFNENGPDYRAKKALAWEKREETRLM--KTISKVKYEYKR 607
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 43/143 (30%), Positives = 71/143 (49%)
Query: 181 FSTASSSYKLHSVEIKPLN--FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 238
F+T +S+ ++ K + +IDEAAQ+ E++ T P + + V+ GD QLPA+
Sbjct: 213 FATIGASFVDFVMKHKKFDPCLCIIDEAAQVMEAQ-TWPA-VYKMKRIVMAGDPKQLPAL 270
Query: 239 VASKISDEAGFGRSLFERLTSL--NHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANV 296
V + + G S+ +R+ N S +L QYR + I+ + N FY NQ+ +V
Sbjct: 271 VFTDEAKAFGLQNSVMDRILEKKNNFSWIMLENQYRSNAKIATWSNTCFYHNQLK--TDV 328
Query: 297 KSKSYEKHYLPGTELGPYSFINI 319
K Y H + + P F N+
Sbjct: 329 KCHEYSLHTILNPQ--PKKFRNL 349
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 116 (45.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/87 (33%), Positives = 51/87 (58%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFE 255
+ ++ ++DEA Q+ + T+ L + VL+GD QLP +V SK + + G +LF+
Sbjct: 763 RQFDYCIVDEATQVLQP--TVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQ 820
Query: 256 RLTSLNHSKHLLNVQYRMHPSISLFPN 282
RL S + +L++QYRM+ +I+ N
Sbjct: 821 RLDS-EKATAVLSLQYRMNKTITRLAN 846
Score = 112 (44.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 36/124 (29%), Positives = 67/124 (54%)
Query: 333 NMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVK 392
N E +V+ +L+ L K+ + + IGV++PY AQ V + KK+ S+ + ++
Sbjct: 944 NYCEAGIVMHLLRYLLKSGYEASR---IGVIAPYRAQ-VELFKKLASKLDTD----LECN 995
Query: 393 SIDGFQGGEEDIIIISTVRCNAGGSIG---------FISKPQRVNVALTRARHCLWILGN 443
++D FQG ++++II S + GG + +R+ VA+TRA++ L +LG+
Sbjct: 996 TVDQFQGRDKNLIIYSCSK--TGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGD 1053
Query: 444 ERTL 447
+ L
Sbjct: 1054 IKCL 1057
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 176 (67.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 79/260 (30%), Positives = 116/260 (44%)
Query: 227 VLIGDECQLPAMVASKISDEAGFGRSLFERLTS----LNHS---------KHLLNVQ--- 270
VL GD QL ++ S+++ G S+ ERL S L LL +
Sbjct: 914 VLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDEDAFGACGAYNPLLVTKLVK 973
Query: 271 -YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTELGPYSFINIIGG-SE 324
YR H ++ P+ FY ++ D V S +EK LP P F + G +
Sbjct: 974 NYRSHSALLALPSRLFYHRELEVCADPTVVASLLGWEK--LPRKGF-PLIFHGVRGNEAR 1030
Query: 325 EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEYENK 384
E S N E V++ L ++ IGV++PY Q +KI N
Sbjct: 1031 EGRSPSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQV----EKIKILLRNV 1086
Query: 385 DGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGS------IGFISKPQRVNVALTRARHCL 438
D +KV S++ FQG E ++IISTVR N +GF+S +R NVA+TR + L
Sbjct: 1087 DLMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALL 1146
Query: 439 WILGNERTLISSESIWGALV 458
+LGN L+ + +GAL+
Sbjct: 1147 IVLGNPHVLVR-DPCFGALL 1165
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 184 (69.8 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 71/240 (29%), Positives = 116/240 (48%)
Query: 183 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 239
T ++S L ++++P F +++DEAAQ E E+ +PL LA + VL GD QL V
Sbjct: 776 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLAGDHMQLSPFV 835
Query: 240 ASKISDEAGFGRSLFERLTSLNHSKH----LLNVQYRMHPSISLFPNLQFYRNQILDGAN 295
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 836 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 893
Query: 296 VKSKSYEKHYLPGTELGPYSFINIIGGS-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 352
K ++++ Y P +F G +E + N EV V++ +++L + W
Sbjct: 894 GKQPAHKEFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 946
Query: 353 -GSKQKVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 411
G SIGVV+PY Q IR +E K V V+ + QG + ++ +STVR
Sbjct: 947 WGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 1002
Score = 52 (23.4 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 419 GFISKPQRVNVALTRARHCLWILGNERTLIS 449
GF+S + +N A+TRA+ + ++G+ L S
Sbjct: 1031 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1061
Score = 37 (18.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 12/58 (20%), Positives = 25/58 (43%)
Query: 485 KELVEIGAESLTSTNQRGKTTLCYDKDGETYREERSTATDSEAAADPMFNSTLNRLTL 542
K++ E + S ++ GK + Y + R ++ ++DP+ S L+L
Sbjct: 1872 KQIAESASSSSPQSSGGGKPAMSYASALRAPPKPRPPPEQAKKSSDPL--SLFQELSL 1927
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 184 (69.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 91/340 (26%), Positives = 149/340 (43%)
Query: 144 CLSVLRNLWNSLDELNL--PCTTSKLLLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF- 200
C + ++ LDE + E K A + T + + L E+ L F
Sbjct: 999 CWRHIEQIFEKLDEFRAFELLRNGRDRTEYLLVKEAKIIAMTCTHA-ALRRNELVKLGFR 1057
Query: 201 ---LVIDEAAQLKESESTIPLQLA----GINHA---VLIGDECQLPAMVASKISDE-AGF 249
+V++EAAQ+ E E+ IPL L G N ++IGD QLP +V ++ + +
Sbjct: 1058 YDNIVMEEAAQILEVETFIPLLLQNPQDGHNRLKRWIMIGDHHQLPPVVQNQAFQKYSNM 1117
Query: 250 GRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGT 309
+SLF RL L+ L+ Q R I+ Q+ N + + +V ++ G
Sbjct: 1118 EQSLFARLVRLSVPNVQLDRQGRARAQIAEL--YQWRYNGLGNLPHVDGLPQFQNANAGF 1175
Query: 310 ELGPYSFINIIG----GSEEFIYHSCRNMVEVSVVIKILQKLYKAWVG-SKQKVSIGVVS 364
P+ FI+I G + H +N+ E + Y +G +K+SI ++
Sbjct: 1176 AF-PFQFIDIPDFNGHGETQPSPHFYQNLGEAEYACALYT--YMRILGYPAEKISI--LT 1230
Query: 365 PYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFIS 422
Y QA IR + G KV ++D +QG + D II+S V+ +IG I
Sbjct: 1231 TYNGQAQLIRDVFQRRCDTNPLIGMPAKVSTVDKYQGQQNDFIILSLVKTR---NIGHIR 1287
Query: 423 KPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAK 462
+R+ VAL+RAR L++LG + + + A+ AK
Sbjct: 1288 DVRRLVVALSRARLGLYVLGRSKVFMDCLELTPAMRIFAK 1327
Score = 40 (19.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 33 KECRKETEGSKGECKPFLKYVKE 55
K C K EG E PF + K+
Sbjct: 958 KGCNKLAEGIISEIFPFTGFFKD 980
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 170 (64.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 58/159 (36%), Positives = 83/159 (52%)
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSK--QKVS---IGVVSPY 366
P F + G E E S N E+ VV++ LQKL ++ G + +S IG++SPY
Sbjct: 540 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQ-GRRGCPTISPKEIGIISPY 598
Query: 367 TAQAVAIRKKIGSE----YENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNA------G 415
Q IR I S+ D +KV S++ FQG E +I+ISTVR C+
Sbjct: 599 RKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQT 658
Query: 416 GSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
+GF+ P+R+NVALTRA+ L ++GN L S + W
Sbjct: 659 FRLGFLKNPKRLNVALTRAKALLIVVGNAAVL-SKDPHW 696
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 184 (69.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 82/261 (31%), Positives = 120/261 (45%)
Query: 227 VLIGDECQLPAMVASKISDEAGFGRSLFERLTSL-------N-------HSKHLLNV--- 269
VL GD QL ++ S+++ G S ERL S N H+ L+
Sbjct: 911 VLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVK 970
Query: 270 QYRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTELGPYSFINIIGG-SE 324
YR H ++ + P+ FY ++ D V S +EK LP P F + G +
Sbjct: 971 NYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEK--LPKKGF-PLIFHGVRGSEAR 1027
Query: 325 EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQAVAIRKKIGSEYEN 383
E S N E V++ L + + S+ S IGV++PY Q IR + N
Sbjct: 1028 EGKSPSWFNPAEAVQVLRYCCLLAHS-ISSQVSASDIGVITPYRKQVEKIRILL----RN 1082
Query: 384 KDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGS------IGFISKPQRVNVALTRARHC 437
D +KV S++ FQG E +IIISTVR N +GF+S +R NVA+TR +
Sbjct: 1083 VDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKAL 1142
Query: 438 LWILGNERTLISSESIWGALV 458
L +LGN L+ + +GAL+
Sbjct: 1143 LIVLGNPHVLVR-DPCFGALL 1162
Score = 37 (18.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 96 HTFGTLLFKDNVVSEELEKLFSHSVDEGISSAFV 129
H +GT+L K+ E + ++ EG S V
Sbjct: 258 HFYGTILLKNKGDIEVTQVTHFGTLKEGRSKTMV 291
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 122 (48.0 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 191 HSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGF 249
H +K ++ +IDEA+ L + S P+ VL+GD QLP +V +K + + G
Sbjct: 1443 HQCLLKMQFDYCIIDEASILSQPISMGPILKC--KSFVLVGDHHQLPPIVNNKEAGKLGL 1500
Query: 250 GRSLFERLTSLNHSKHLLNV--QYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEKHY 305
SLF++L S +H + N+ QYRM SI N Y N+++ G ++ + S + +Y
Sbjct: 1501 DISLFKQL-STSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNY 1558
Score = 105 (42.0 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 391 VKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-QRVNVALTRARHCLWILGNERTL 447
+ +ID FQG ++D IIIS VR N IG + K +R+NVA TRA+ L +G++ +L
Sbjct: 1753 ILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSL 1810
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 170 (64.9 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 58/159 (36%), Positives = 83/159 (52%)
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSK--QKVS---IGVVSPY 366
P F + G E E S N E+ VV++ LQKL ++ G + +S IG++SPY
Sbjct: 772 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQ-GRRGCPTISPKEIGIISPY 830
Query: 367 TAQAVAIRKKIGSE----YENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNA------G 415
Q IR I S+ D +KV S++ FQG E +I+ISTVR C+
Sbjct: 831 RKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQT 890
Query: 416 GSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
+GF+ P+R+NVALTRA+ L ++GN L S + W
Sbjct: 891 FRLGFLKNPKRLNVALTRAKALLIVVGNAAVL-SKDPHW 928
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 169 (64.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 82/317 (25%), Positives = 143/317 (45%)
Query: 144 CLSVLRNLWNSLDELN-LPCTTSKLLLEDFCF-KRASLFFSTAS-SSYKLHS-VEIK-PL 198
C +R ++ L+E S L + K A + T + ++ K H VE+
Sbjct: 996 CYRHIRKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKY 1055
Query: 199 NFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVASKISDE-AGFG 250
+ ++++EAAQ+ E E+ IPL L + ++IGD QLP ++ + + +
Sbjct: 1056 DNILMEEAAQILEIETFIPLLLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNME 1115
Query: 251 RSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTE 310
+SLF R L L+ Q R S+ N ++ Q+ + +V+ + + PG
Sbjct: 1116 QSLFTRFVRLGVPTVDLDAQGRARASLCNLYNWRY--KQLGNLPHVQLQPEFRTPNPGFT 1173
Query: 311 LGPYSFINI-----IGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSP 365
+ IN+ +G SE Y +N+ E + + +Y +G + I +++
Sbjct: 1174 FD-FQLINVEDFNGVGESEPNPYFY-QNLAEAEYSVALY--MYMRLLGYPAE-RISILTT 1228
Query: 366 YTAQAVAIRKKIGSEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISK 423
Y Q IR I + F KV ++D FQG + D II+S VR A +G +
Sbjct: 1229 YNGQKHLIRDVIHQRCASNSFFGQPSKVTTVDRFQGQQNDYIILSLVRTKA---VGHLRD 1285
Query: 424 PQRVNVALTRARHCLWI 440
+R+ VA++RAR L+I
Sbjct: 1286 VRRLVVAMSRARLGLYI 1302
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 163 (62.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 66/253 (26%), Positives = 113/253 (44%)
Query: 191 HSVEI-KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGF 249
H + + K +F ++DEA+Q+ + PL + VL+GD QLP +V + + + G
Sbjct: 717 HPIFVQKQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGM 774
Query: 250 GRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGT 309
SLF+RL ++ L VQYRM+ I N Y ++ G+ S + LP
Sbjct: 775 SESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATAN--LPNL 832
Query: 310 ELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 369
++ F + S+ ++ + ++E + L KA G + IG++SPY Q
Sbjct: 833 KMLKLEFAD---ASKTWL----KEVLEPDKPVCFLNT-EKA--GCRPS-DIGIISPYRHQ 881
Query: 370 AVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQRVNV 429
I + EN+ + G + II+ N + +R+NV
Sbjct: 882 LKVITDLMARLKENRVEVNT-IDKYQGRD--KSIIIVSFVRNSNDENLGALLKDWRRLNV 938
Query: 430 ALTRARHCLWILG 442
A+TRA+H L ++G
Sbjct: 939 AITRAKHKLIMVG 951
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 162 (62.1 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 64/218 (29%), Positives = 100/218 (45%)
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKV-----SIGVVSPY 366
P F ++G E E S N E + V L++L + K K S+GV+SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLTS-SSKKGKARLSPRSVGVISPY 833
Query: 367 TAQAVAIRK---KIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAGG------ 416
Q IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 834 RKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLD 893
Query: 417 -SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFFNADEDRN 475
++GF+ P+R NVA+TRA+ L ++GN L+ + W A + K +
Sbjct: 894 FNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKAFLEFCKENGGYTGCPFP-- 950
Query: 476 VAKARLDIGKELVEIGAESLTSTNQRGKTTLCYDKDGE 513
AK L G+ L++ G L+ + ++ ++GE
Sbjct: 951 -AKLDLQQGQNLLQ-GLSKLSPSTSGPRSHNYLPQEGE 986
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 163 (62.4 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 83/320 (25%), Positives = 141/320 (44%)
Query: 144 CLSVLRNLWNSLDELN-LPCTTSKLLLEDFCF-KRASLFFSTASSSYKLHSVEIKPLNF- 200
C S L+ ++ L+E S ++ K+A + T + + L + L F
Sbjct: 1058 CFSHLKTVFQELEECRAFELLKSTADRANYLMTKQAKIVAMTCTHA-ALKRRDFLQLGFK 1116
Query: 201 ---LVIDEAAQLKESESTIPLQL-------AGINHAVLIGDECQLPAMVASKISDE-AGF 249
L+++E+AQ+ E E+ IP+ L A + +LIGD QLP +V + + +
Sbjct: 1117 YDNLLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHM 1176
Query: 250 GRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGT 309
+SLF R L LN Q R PS++ N + YR+ + D + VK + G
Sbjct: 1177 DQSLFTRFVRLGIPYIELNAQGRARPSLAKLYNWR-YRD-LGDLSIVKEAPIFQRANAGF 1234
Query: 310 ELGPYSFINII---GGSEE----FIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGV 362
Y +N+ G E + Y +N E ++ + +Y +G I +
Sbjct: 1235 SY-EYQLVNVPDYEGRGESTPSPWFY---QNQGEAEYIVSVY--IYMRLLGYPAN-KISI 1287
Query: 363 VSPYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGF 420
++ Y Q + IR I G KV ++D FQG + D I++S VR +G
Sbjct: 1288 LTTYNGQKLLIRDVINRRCVPYPFIGPPSKVTTVDKFQGQQNDFILLSLVRTRF---VGH 1344
Query: 421 ISKPQRVNVALTRARHCLWI 440
+ +R+ VA++RAR L++
Sbjct: 1345 LRDVRRLVVAMSRARLGLYV 1364
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 168 (64.2 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 82/276 (29%), Positives = 134/276 (48%)
Query: 199 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ-LPAMVASKISDEAGFGRSLFERL 257
++ ++DEA+Q+ S PL+ A V D+ Q L ++ E RSLF L
Sbjct: 1096 DYCIVDEASQITLPVSLGPLRFAKKFVMVGDHDQLQPLVTHPDKRVKQE--LSRSLFSLL 1153
Query: 258 TSLN-HSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLP-------GT 309
+ S L QYRM+ I N Y N++ G+ +++ K P G
Sbjct: 1154 AKEHPDSVSHLTYQYRMNSDIMNVCNTLIYNNKLKCGSEQVAQNSLKIPHPEVLNSFIGE 1213
Query: 310 ELGPYS-FINIIGGSEE---FIYHSCRNMVEVSV---VIK-----ILQKLYKAWV-GSKQ 356
++ P S +I+ I + F+ + VE +V VI ++Q++ A V G +
Sbjct: 1214 DVSPDSQWIHKIFDEKNNVLFLDYDAVPAVEENVGEMVINTKEALLIQQIVNALVHGGVK 1273
Query: 357 KVSIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGG 416
+ IGV+S Y AQ ++K + + KD +++ + D +QG +++ IIIS VR N
Sbjct: 1274 EDEIGVMSFYRAQLSVLKKNLNNL---KD---LEILTADQYQGRDKECIIISLVRSNERK 1327
Query: 417 SIGFISKP-QRVNVALTRARHCLWILGNERTLISSE 451
G + K +R+NVA TRA+ L ILG+ TL ++E
Sbjct: 1328 FAGDLMKEYRRLNVATTRAKTKLIILGSRFTLSTNE 1363
Score = 43 (20.2 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 475 NVAKARLDIGKELVEIGAESLTSTNQRGKTTLCYDKDGETY 515
NVA R +L+ +G+ STN+ KT + Y ++ + Y
Sbjct: 1340 NVATTRAKT--KLIILGSRFTLSTNELTKTFIDYLENEKWY 1378
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 161 (61.7 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 79/315 (25%), Positives = 140/315 (44%)
Query: 144 CLSVLRNLWNSLDELN-LPCTTSKLLLEDFCF-KRASLFFSTAS-SSYKLHS-VEIK-PL 198
C L+ ++ L+E S L + K A + T + ++ K H VE+
Sbjct: 1006 CFRHLKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKY 1065
Query: 199 NFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVASKISDE-AGFG 250
+ ++++E+AQ+ E E+ IPL L + ++IGD QLP ++ + + +
Sbjct: 1066 DNILMEESAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNME 1125
Query: 251 RSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKHYLPG 308
+SLF R + L+ Q R S+ N ++ L + + ++ +L
Sbjct: 1126 QSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLMPEFRTANAGFLYD 1185
Query: 309 TELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTA 368
+L N +G SE Y +N+ E V+ + +Y +G I +++ Y
Sbjct: 1186 FQLINVEDFNGVGESEPNPYFY-QNLGEAEYVVAVF--MYMCLLGYPAD-RISILTTYNG 1241
Query: 369 QAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP-Q 425
Q IR I N G KV ++D FQG + D I++S VR A +G + + +
Sbjct: 1242 QKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTKA---VGHLRRDVR 1298
Query: 426 RVNVALTRARHCLWI 440
R+ VA++RAR L+I
Sbjct: 1299 RLVVAMSRARLGLYI 1313
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 159 (61.0 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 55/159 (34%), Positives = 77/159 (48%)
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKV-----SIGVVSPY 366
P F ++G E E S N E + V L KL A K K S+GV+SPY
Sbjct: 755 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYL-KLLLAPSSKKGKARLSPRSVGVISPY 813
Query: 367 TAQAVAIRK---KIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAGG------ 416
Q IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 814 RKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLD 873
Query: 417 -SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
++GF+ P+R NVA+TRA+ L ++GN L+ + W
Sbjct: 874 FNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 911
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 159 (61.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 55/159 (34%), Positives = 77/159 (48%)
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKV-----SIGVVSPY 366
P F ++G E E S N E + V L KL A K K S+GV+SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYL-KLLLAPSSKKGKARLSPRSVGVISPY 833
Query: 367 TAQAVAIRK---KIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAGG------ 416
Q IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 834 RKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLD 893
Query: 417 -SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
++GF+ P+R NVA+TRA+ L ++GN L+ + W
Sbjct: 894 FNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 931
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 159 (61.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 56/159 (35%), Positives = 77/159 (48%)
Query: 313 PYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKV-----SIGVVSPY 366
P F ++G E E S N E + V L KL A K K S+GV+SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYL-KLLLAPSSKKGKARLSPRSVGVISPY 833
Query: 367 TAQAVAIR---KKIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAGG------ 416
Q IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 834 RKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLD 893
Query: 417 -SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIW 454
++GF+ P+R NVA+TRA+ L I+GN L+ + W
Sbjct: 894 FNLGFLKNPKRFNVAVTRAKALLIIVGNP-LLLGHDPDW 931
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 160 (61.4 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 88/336 (26%), Positives = 146/336 (43%)
Query: 128 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLP-CTTSKLLLEDFCF-KRASLFFSTAS 185
F G+ Y + C ++ ++ L+E S L + K A + T +
Sbjct: 982 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1040
Query: 186 -SSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDEC 233
++ K H + +K L F ++++EAAQ+ E E+ IPL L + ++IGD
Sbjct: 1041 HAALKRHDL-VK-LGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHH 1098
Query: 234 QLPAMVASKISDE-AGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILD 292
QLP ++ + + + +SLF R + L+ Q R S+ NL +R + L
Sbjct: 1099 QLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNLG 1155
Query: 293 GANVKSKSYEKHYLPGTELGPYSFINI-----IGGSEEFIYHSCRNMVEVSVVIKILQKL 347
E L + IN+ +G SE Y +N+ E V+ + +
Sbjct: 1156 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1212
Query: 348 YKAWVG-SKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDI 404
Y +G K+SI ++ Y Q IR I N G KV ++D FQG + D
Sbjct: 1213 YMCLLGYPADKISI--LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDY 1270
Query: 405 IIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
I++S VR A +G + +R+ VA++RAR L+I
Sbjct: 1271 ILLSLVRTRA---VGHLRDVRRLVVAMSRARLGLYI 1303
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 160 (61.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 88/336 (26%), Positives = 146/336 (43%)
Query: 128 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLP-CTTSKLLLEDFCF-KRASLFFSTAS 185
F G+ Y + C ++ ++ L+E S L + K A + T +
Sbjct: 986 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1044
Query: 186 -SSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDEC 233
++ K H + +K L F ++++EAAQ+ E E+ IPL L + ++IGD
Sbjct: 1045 HAALKRHDL-VK-LGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHH 1102
Query: 234 QLPAMVASKISDE-AGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILD 292
QLP ++ + + + +SLF R + L+ Q R S+ NL +R + L
Sbjct: 1103 QLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNLG 1159
Query: 293 GANVKSKSYEKHYLPGTELGPYSFINI-----IGGSEEFIYHSCRNMVEVSVVIKILQKL 347
E L + IN+ +G SE Y +N+ E V+ + +
Sbjct: 1160 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1216
Query: 348 YKAWVG-SKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDI 404
Y +G K+SI ++ Y Q IR I N G KV ++D FQG + D
Sbjct: 1217 YMCLLGYPADKISI--LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDY 1274
Query: 405 IIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
I++S VR A +G + +R+ VA++RAR L+I
Sbjct: 1275 ILLSLVRTRA---VGHLRDVRRLVVAMSRARLGLYI 1307
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 157 (60.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 68/227 (29%), Positives = 105/227 (46%)
Query: 306 LPGTELGPYSFINIIGGSE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKV-----S 359
LP + P F ++G E E S N E + V L++L A K K S
Sbjct: 769 LPRQDF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLL-APSSKKGKARLSPRS 826
Query: 360 IGVVSPYTAQAVAIR---KKIGSEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNAG 415
+GV+SPY Q IR K+ + D +KV S++ FQG E +I+ISTVR +
Sbjct: 827 VGVISPYRKQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQS 886
Query: 416 G-------SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKARQCFF 468
++GF+ P+R NVA+TRA+ L ++GN L+ + W + K +
Sbjct: 887 FVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKVFLEFCKENGGYT 945
Query: 469 NADEDRNVAKARLDIGKELVEIGAESLT-STNQ-RGKTTLCYDKDGE 513
AK L G+ L++ G L+ ST+ + L +++GE
Sbjct: 946 GCPFP---AKLDLQQGQNLLQ-GLSKLSPSTSGLKSHDYLPQEREGE 988
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 73/264 (27%), Positives = 112/264 (42%)
Query: 194 EIKPL-NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDE---AGF 249
EIK L + IDEA+QL L +L+GD QLP + E A
Sbjct: 310 EIKDLFDITFIDEASQLALYVLGSLATLLPKTRIILVGDMHQLPPYTEDALPAELKRAAV 369
Query: 250 GRSLFERLTSLNHSK-HLLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKS--YEKHYL 306
G L + S HL V +R I+ FY N + ++ E L
Sbjct: 370 GEPLTLAVKGRRWSSMHLTRV-HRCPKMITDLLGAVFYGNTLTSTRKAVNRVPILEAMEL 428
Query: 307 PGTELGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPY 366
P P+ F+N I + + S N E ++++ L + VS+ V++ Y
Sbjct: 429 PSHH--PFVFVNYISQQTQ-VGKSFSNENEARYALQLVTALKRHAREQNTTVSVAVLNFY 485
Query: 367 TAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKPQR 426
AQ + I +DG V+V +IDG QG E D+ I+ R + F+ P R
Sbjct: 486 GAQYSYVYS-IA-----EDG--VRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFLVNPNR 537
Query: 427 VNVALTRARHCLWILGNERTLISS 450
+NVAL+R++ ++G +R LI +
Sbjct: 538 INVALSRSKMATVVIG-QRHLIGN 560
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 151 (58.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 72/262 (27%), Positives = 121/262 (46%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM-VASKISDEAGFGRSLF 254
+ + +V+DE + + + L V+ GD QLP + +A+ G +F
Sbjct: 333 RTFDLVVVDEVSMAFVPQIALAASLG--KRIVVCGDFLQLPPIAMANHELVRKWLGEDMF 390
Query: 255 ER---LTSLNHSK-H----LLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYL 306
+ S+N S+ H +L Q RMH IS F N Y+N++ D +V E+ L
Sbjct: 391 YHAGIVESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVS----ERKEL 446
Query: 307 PGTELGPYSF-INIIGGSEEFIYHSCRNMVEVSV--VIKILQKLYKAWVGSKQKV-SIGV 362
+L P++ +++ + + S ++ S ++ L + +G V SIG+
Sbjct: 447 --AQLQPFANEASVLFDTSQMGAFSLKDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGI 504
Query: 363 VSPYTAQA----VAIRKKIG-SEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC---NA 414
V+PY AQ+ IR+ + ++Y+N V ++ FQG E D++I TV
Sbjct: 505 VTPYRAQSRFLSTCIREMLQRTKYQN---IPVLAATVHKFQGSERDMMIFDTVDSYPQER 561
Query: 415 GGSIGFISKPQR-VNVALTRAR 435
G + F K R VNVA+TRAR
Sbjct: 562 PGVLFFDHKNHRLVNVAVTRAR 583
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 151 (58.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 72/262 (27%), Positives = 121/262 (46%)
Query: 196 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM-VASKISDEAGFGRSLF 254
+ + +V+DE + + + L V+ GD QLP + +A+ G +F
Sbjct: 333 RTFDLVVVDEVSMAFVPQIALAASLG--KRIVVCGDFLQLPPIAMANHELVRKWLGEDMF 390
Query: 255 ER---LTSLNHSK-H----LLNVQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYL 306
+ S+N S+ H +L Q RMH IS F N Y+N++ D +V E+ L
Sbjct: 391 YHAGIVESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVS----ERKEL 446
Query: 307 PGTELGPYSF-INIIGGSEEFIYHSCRNMVEVSV--VIKILQKLYKAWVGSKQKV-SIGV 362
+L P++ +++ + + S ++ S ++ L + +G V SIG+
Sbjct: 447 --AQLQPFANEASVLFDTSQMGAFSLKDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGI 504
Query: 363 VSPYTAQA----VAIRKKIG-SEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC---NA 414
V+PY AQ+ IR+ + ++Y+N V ++ FQG E D++I TV
Sbjct: 505 VTPYRAQSRFLSTCIREMLQRTKYQN---IPVLAATVHKFQGSERDMMIFDTVDSYPQER 561
Query: 415 GGSIGFISKPQR-VNVALTRAR 435
G + F K R VNVA+TRAR
Sbjct: 562 PGVLFFDHKNHRLVNVAVTRAR 583
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/139 (30%), Positives = 73/139 (52%)
Query: 306 LPGTELGPYSFI-NIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVS 364
+PGT G + I ++ E+ N+ E +++ + KA G IG+++
Sbjct: 649 MPGT--GKTTTICTLVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKA--GCSPS-DIGIIA 703
Query: 365 PYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNAGGSIGFISKP 424
PY Q I + G V+V ++D +QG ++ I+++S VR N G++G + K
Sbjct: 704 PYRQQLKIINDLLARSI----GM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKD 758
Query: 425 -QRVNVALTRARHCLWILG 442
+R+NVA+TRA+H L +LG
Sbjct: 759 WRRLNVAITRAKHKLILLG 777
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 158 (60.7 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 76/261 (29%), Positives = 123/261 (47%)
Query: 201 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVASKISDEAGFGRSLFERLTSL 260
+++DEA+ + E +P+ LA N VL+GD QL +V S+ + + G G S E+L
Sbjct: 823 VIVDEASMVLEP-LLLPV-LATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQ- 879
Query: 261 NHSKHLLNV--QYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEK--HYLPGTELGPYS 315
+H ++++ QYRM+ IS+ + FY N+++ G +V S ++ Y+ + G
Sbjct: 880 SHPGVVVSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDH 939
Query: 316 FINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRK 375
+ G I SC + S + +Q G ++S Q V
Sbjct: 940 IRKALSGD---IKDSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGV 996
Query: 376 K---IG--SEYENK-D---GFT----VKVKSIDGFQGGEEDIIIIS-TVRCNAGGSIGFI 421
K IG S Y + D G ++V +ID +QG E+ +II S T N+ +
Sbjct: 997 KPHEIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELL 1056
Query: 422 SKPQRVNVALTRARHCLWILG 442
+RVNVALTRAR L ++G
Sbjct: 1057 KDERRVNVALTRARQKLVVVG 1077
Score = 41 (19.5 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 124 ISSAFVGKRYLLQLHQRRSECLSVLRNLWNS 154
+S++F KR L E + N+W+S
Sbjct: 317 LSNSFFSKREPLPSKSELLEVYDIEENIWDS 347
Score = 38 (18.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 13 HIYVEKLEEREDCNVNQSEEKE 34
H+ K E+R+DC + +KE
Sbjct: 140 HLTARKGEKRDDCLDLECIDKE 161
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 160 (61.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 88/336 (26%), Positives = 146/336 (43%)
Query: 128 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLP-CTTSKLLLEDFCF-KRASLFFSTAS 185
F G+ Y + C ++ ++ L+E S L + K A + T +
Sbjct: 982 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1040
Query: 186 -SSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDEC 233
++ K H + +K L F ++++EAAQ+ E E+ IPL L + ++IGD
Sbjct: 1041 HAALKRHDL-VK-LGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHH 1098
Query: 234 QLPAMVASKISDE-AGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILD 292
QLP ++ + + + +SLF R + L+ Q R S+ NL +R + L
Sbjct: 1099 QLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNLG 1155
Query: 293 GANVKSKSYEKHYLPGTELGPYSFINI-----IGGSEEFIYHSCRNMVEVSVVIKILQKL 347
E L + IN+ +G SE Y +N+ E V+ + +
Sbjct: 1156 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1212
Query: 348 YKAWVG-SKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDI 404
Y +G K+SI ++ Y Q IR I N G KV ++D FQG + D
Sbjct: 1213 YMCLLGYPADKISI--LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDY 1270
Query: 405 IIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
I++S VR A +G + +R+ VA++RAR L+I
Sbjct: 1271 ILLSLVRTRA---VGHLRDVRRLVVAMSRARLGLYI 1303
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 110 EELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDEL 158
+ L+K D + G +L Q+ R E +S ++N ++L ++
Sbjct: 913 KRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDV 961
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 157 (60.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 87/336 (25%), Positives = 146/336 (43%)
Query: 128 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLP-CTTSKLLLEDFCF-KRASLFFSTAS 185
F G+ Y + C ++ ++ L+E S L + K A + T +
Sbjct: 964 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1022
Query: 186 -SSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDEC 233
++ K H + +K L F ++++EAAQ+ E E+ IPL L + ++IGD
Sbjct: 1023 HAALKRHDL-VK-LGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHH 1080
Query: 234 QLPAMVASKISDE-AGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILD 292
QLP ++ + + + +SLF R + L+ Q R S+ NL +R + L
Sbjct: 1081 QLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNLG 1137
Query: 293 GANVKSKSYEKHYLPGTELGPYSFINI-----IGGSEEFIYHSCRNMVEVSVVIKILQKL 347
E L + IN+ +G SE Y +N+ E V+ + +
Sbjct: 1138 NLPHVQLLLEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1194
Query: 348 YKAWVG-SKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDI 404
Y +G K+SI ++ Y Q IR I + G KV ++D FQG + D
Sbjct: 1195 YMCLLGYPADKISI--LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDY 1252
Query: 405 IIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
I++S VR A +G + +R+ VA++RAR L+I
Sbjct: 1253 ILLSLVRTRA---VGHLRDVRRLVVAMSRARLGLYI 1285
Score = 40 (19.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 110 EELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDEL 158
+ L+K D + G +L Q+ R E +S ++N N++ ++
Sbjct: 895 KRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKSNTMPDI 943
>UNIPROTKB|Q8EA89 [details] [associations]
symbol:SO_4019 "P-loop containing nucleoside triphosphate
hydrolase superfamily" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001261 PROSITE:PS00758 GO:GO:0006508
GO:GO:0008237 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_719549.1 ProteinModelPortal:Q8EA89 GeneID:1171647
KEGG:son:SO_4019 PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 144 (55.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 65/285 (22%), Positives = 132/285 (46%)
Query: 179 LFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP-- 236
++ S+ +S +K+ +E + + ++IDEA Q + LQ A A+++GD QL
Sbjct: 505 IWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAACLPALQRA--KAALVVGDSKQLRHF 562
Query: 237 AMVA----SKISDEAGFG-----------RSLFERLT-SLNHSKHL--LNVQYRMHPSIS 278
+ ++ ++I + G S+ + ++ SL + LN +R P +
Sbjct: 563 SFLSRAKQTQIQTQLGLAPDCRGLMSYRDASMLDLVSQSLASQSQVVFLNEHFRSKPELI 622
Query: 279 LFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVS 338
F N QFY+ + K + + P T G +++ G + N +E
Sbjct: 623 QFSNQQFYQGML--------KIMQ--HRPCTSSGHLHRVHVTGSRDS----KGINAIEAE 668
Query: 339 VVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEY--ENKDGFTVKVKSIDG 396
+I+ L +L + SIGV+S + QA + ++I + + + + +++ + G
Sbjct: 669 ALIQKLSQLIDEQENALVPSSIGVLSCFRNQAEYLSQQILARFSAQQLERHQLRIATPFG 728
Query: 397 FQGGEEDIIIIS-TVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
FQG E DI+++S ++ N + ++++ NVA+TRA+ W+
Sbjct: 729 FQGEERDIMLLSFSITANDSRAAVYLNREDMFNVAITRAKQMQWL 773
>TIGR_CMR|SO_4019 [details] [associations]
symbol:SO_4019 "hypothetical protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001261
PROSITE:PS00758 GO:GO:0006508 GO:GO:0008237 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_719549.1
ProteinModelPortal:Q8EA89 GeneID:1171647 KEGG:son:SO_4019
PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 144 (55.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 65/285 (22%), Positives = 132/285 (46%)
Query: 179 LFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP-- 236
++ S+ +S +K+ +E + + ++IDEA Q + LQ A A+++GD QL
Sbjct: 505 IWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAACLPALQRA--KAALVVGDSKQLRHF 562
Query: 237 AMVA----SKISDEAGFG-----------RSLFERLT-SLNHSKHL--LNVQYRMHPSIS 278
+ ++ ++I + G S+ + ++ SL + LN +R P +
Sbjct: 563 SFLSRAKQTQIQTQLGLAPDCRGLMSYRDASMLDLVSQSLASQSQVVFLNEHFRSKPELI 622
Query: 279 LFPNLQFYRNQILDGANVKSKSYEKHYLPGTELGPYSFINIIGGSEEFIYHSCRNMVEVS 338
F N QFY+ + K + + P T G +++ G + N +E
Sbjct: 623 QFSNQQFYQGML--------KIMQ--HRPCTSSGHLHRVHVTGSRDS----KGINAIEAE 668
Query: 339 VVIKILQKLYKAWVGSKQKVSIGVVSPYTAQAVAIRKKIGSEY--ENKDGFTVKVKSIDG 396
+I+ L +L + SIGV+S + QA + ++I + + + + +++ + G
Sbjct: 669 ALIQKLSQLIDEQENALVPSSIGVLSCFRNQAEYLSQQILARFSAQQLERHQLRIATPFG 728
Query: 397 FQGGEEDIIIIS-TVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
FQG E DI+++S ++ N + ++++ NVA+TRA+ W+
Sbjct: 729 FQGEERDIMLLSFSITANDSRAAVYLNREDMFNVAITRAKQMQWL 773
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 155 (59.6 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 87/336 (25%), Positives = 146/336 (43%)
Query: 128 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLP-CTTSKLLLEDFCF-KRASLFFSTAS 185
F G+ Y + C ++ ++ L+E S L + K A + T +
Sbjct: 981 FKGRTYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1039
Query: 186 -SSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDEC 233
++ K H + +K L F ++++EAAQ+ E E+ IPL L + ++IGD
Sbjct: 1040 HAALKRHDL-VK-LGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHH 1097
Query: 234 QLPAMVASKISDE-AGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILD 292
QLP ++ + + + +SLF R + L+ Q R S+ NL +R + L
Sbjct: 1098 QLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNLG 1154
Query: 293 GANVKSKSYEKHYLPGTELGPYSFINI-----IGGSEEFIYHSCRNMVEVSVVIKILQKL 347
E L + IN+ +G SE Y +N+ E V+ + +
Sbjct: 1155 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1211
Query: 348 YKAWVG-SKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDI 404
Y +G K+SI ++ Y Q IR I + G KV ++D FQG + D
Sbjct: 1212 YMCLLGYPADKISI--LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDY 1269
Query: 405 IIISTVRCNAGGSIGFISKPQRVNVALTRARHCLWI 440
I++S VR A +G + +R+ VA++RAR L+I
Sbjct: 1270 ILLSLVRTRA---VGHLRDVRRLVVAMSRARLGLYI 1302
Score = 40 (19.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 110 EELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSLDEL 158
+ L+K D + G +L Q+ R E +S ++N N L ++
Sbjct: 912 KRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNMLPDV 960
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 45/137 (32%), Positives = 65/137 (47%)
Query: 360 IGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNA---- 414
I +++PY AQ I+ + E K+ V V ++ QG E +I+STVR C+
Sbjct: 75 IAILTPYNAQVSEIKMTL----EKKNVRNVTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQ 130
Query: 415 -----------GGSIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGALVCDAKA 463
G +GF++ +VNVA+TRA+ L ILGN L E +W L+
Sbjct: 131 AYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCE-LWDRLLDHYYR 189
Query: 464 RQCFFNADEDRNV-AKA 479
+ C N D V AKA
Sbjct: 190 KSCVVNPASDIRVKAKA 206
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 141 (54.7 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 80/319 (25%), Positives = 135/319 (42%)
Query: 128 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLP-CTTSKLLLEDFCF-KRASLFFSTAS 185
F G+ Y + C ++ ++ L+E S L + K A + T +
Sbjct: 899 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 957
Query: 186 -SSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDEC 233
++ K H + +K L F ++++EAAQ+ E E+ IPL L + ++IGD
Sbjct: 958 HAALKRHDL-VK-LGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHH 1015
Query: 234 QLPAMVASKISDE-AGFGRSLFERLTSLNHSKHLLNVQYRMHPSISLFPNLQFYRNQILD 292
QLP ++ + + + +SLF R + L+ Q R S+ NL +R + L
Sbjct: 1016 QLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNLG 1072
Query: 293 GANVKSKSYEKHYLPGTELGPYSFINI-----IGGSEEFIYHSCRNMVEVSVVIKILQKL 347
E L + IN+ +G SE Y +N+ E V+ + +
Sbjct: 1073 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1129
Query: 348 YKAWVG-SKQKVSIGVVSPYTAQAVAIRKKIGSEYENKD--GFTVKVKSIDGFQGGEEDI 404
Y +G K+SI ++ Y Q IR I + G KV ++D FQG + D
Sbjct: 1130 YMCLLGYPADKISI--LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDY 1187
Query: 405 IIISTVRCNAGGSIGFISK 423
I++S VR A G + ++ K
Sbjct: 1188 ILLSLVRTRAVGHLRYVRK 1206
Score = 40 (19.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 110 EELEKLFSHSVDEGISSAFVGKRYLLQLHQRRSECLSVLRNLWNSL 155
+ L+K D + G +L Q+ R E +S ++N N+L
Sbjct: 830 KRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTL 875
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 92 (37.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 198 LNFLVIDEAAQLKESESTIP--LQLAGINHAVLIGDECQLPAMVASKISDEAG---FGRS 252
L++++IDEA+Q + +P L L+ + +++GD QL A + K+ EA +
Sbjct: 333 LDYVIIDEASQ----QDIVPGVLALSCAKNLIIVGDRKQL-AHIPEKLGLEAPAPWYDCE 387
Query: 253 LFERLTSL------NHSKHLLNVQYRMHPSISLFPNLQFYRNQIL 291
+ L S + LL YR HP I F N QFY NQ++
Sbjct: 388 TYSLLDSCVGVFGDSIPMTLLKEHYRCHPRIIQFCNQQFYDNQLV 432
Score = 77 (32.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 35/160 (21%), Positives = 73/160 (45%)
Query: 301 YEKHYLPGTE-LGPYSFINIIGGSEEFIYHSCRNMVEVSVVIKILQKLYKA-WVGSKQKV 358
Y+ +P T+ G S ++ ++ N+ E+ ++ +L ++ W G +
Sbjct: 427 YDNQLVPMTQDAGEQSLTLLVTAKGNHTRNNS-NLRELDSLLAVLDGSGESIWEGEDGR- 484
Query: 359 SIGVVSPYTAQAVAIRKKIGSEYENKDGFTVKVKSIDGFQGGEEDIIIISTV--RCNAGG 416
G ++P+ QA + +++ N ++ FQG E D I+ STV + +
Sbjct: 485 --GFIAPFKNQATLSGSCLPADFIND--------TVHKFQGRECDEIVFSTVLDKHKSPE 534
Query: 417 SIGFISKPQRVNVALTRARHCLWILGNERTLISSESIWGA 456
+ F+ + VNVA++RA+ N TL++ + ++ A
Sbjct: 535 RLSFVDDARMVNVAVSRAK-------NRFTLVTGDGVFKA 567
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 549 549 0.00096 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 171
No. of states in DFA: 617 (66 KB)
Total size of DFA: 305 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.44u 0.15s 46.59t Elapsed: 00:00:02
Total cpu time: 46.48u 0.15s 46.63t Elapsed: 00:00:02
Start: Sat May 11 08:54:33 2013 End: Sat May 11 08:54:35 2013
WARNINGS ISSUED: 1