Query 008900
Match_columns 549
No_of_seqs 394 out of 2189
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 14:19:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008900.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008900hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 4.4E-41 1.5E-45 346.3 24.4 253 48-325 19-306 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 2.8E-37 9.7E-42 318.0 24.4 254 52-330 9-300 (312)
3 3tc8_A Leucine aminopeptidase; 100.0 3.1E-36 1.1E-40 310.2 25.1 255 46-326 17-308 (309)
4 4fai_A CG5976, isoform B; alph 100.0 9E-37 3.1E-41 317.0 20.0 255 50-326 30-321 (330)
5 3kas_A Transferrin receptor pr 100.0 1.6E-37 5.6E-42 346.4 14.8 273 127-406 265-567 (640)
6 3gux_A Putative Zn-dependent e 100.0 1.3E-35 4.5E-40 306.0 24.0 252 48-326 21-312 (314)
7 3fed_A Glutamate carboxypeptid 100.0 3.7E-36 1.3E-40 338.5 7.5 275 126-406 310-634 (707)
8 3pb6_X Glutaminyl-peptide cycl 100.0 2.8E-34 9.5E-39 297.8 20.3 255 48-327 33-327 (330)
9 1tkj_A Aminopeptidase, SGAP; d 100.0 6.1E-33 2.1E-37 282.1 25.9 252 49-334 2-282 (284)
10 2afw_A Glutaminyl-peptide cycl 100.0 2.6E-33 9E-38 290.8 21.0 253 48-327 25-326 (329)
11 1rtq_A Bacterial leucyl aminop 100.0 1.3E-31 4.5E-36 274.2 24.3 264 48-335 14-294 (299)
12 3iib_A Peptidase M28; YP_92679 100.0 1.2E-28 4.1E-33 265.6 20.2 200 126-333 233-436 (444)
13 2ek8_A Aminopeptidase; metallo 100.0 1.5E-27 5.2E-32 255.3 22.4 205 127-339 202-412 (421)
14 3k9t_A Putative peptidase; str 99.9 3.6E-21 1.2E-25 201.6 22.5 198 99-331 154-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.8 3E-17 1E-21 165.1 19.7 232 54-329 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 5E-17 1.7E-21 163.2 16.6 232 54-329 6-268 (268)
17 1q7l_A Aminoacylase-1; catalys 99.7 9E-16 3.1E-20 147.4 16.0 146 50-223 6-174 (198)
18 1vhe_A Aminopeptidase/glucanas 99.6 2.6E-14 8.9E-19 150.2 17.3 226 55-329 8-354 (373)
19 2gre_A Deblocking aminopeptida 99.6 2.6E-14 8.9E-19 148.8 15.2 221 52-325 4-343 (349)
20 2wyr_A Cobalt-activated peptid 99.6 2.9E-14 9.8E-19 147.2 15.3 147 162-326 171-331 (332)
21 1y0y_A FRV operon protein FRVX 99.5 4E-14 1.4E-18 147.6 15.2 219 56-329 8-350 (353)
22 1cg2_A Carboxypeptidase G2; me 99.5 1.4E-13 4.8E-18 145.0 16.5 146 53-228 18-181 (393)
23 3n5f_A L-carbamoylase, N-carba 99.5 2.2E-13 7.5E-18 144.3 16.5 129 52-212 3-143 (408)
24 2zog_A Cytosolic non-specific 99.5 9.8E-13 3.4E-17 142.0 19.0 152 53-227 19-201 (479)
25 2pok_A Peptidase, M20/M25/M40 99.5 4.7E-13 1.6E-17 144.9 15.8 145 55-227 45-211 (481)
26 2fvg_A Endoglucanase; TM1049, 99.4 2.7E-13 9.2E-18 140.6 11.9 149 162-329 165-335 (340)
27 3ct9_A Acetylornithine deacety 99.4 1.4E-12 4.8E-17 135.9 17.0 134 54-227 11-164 (356)
28 3pfo_A Putative acetylornithin 99.4 2.7E-12 9.1E-17 136.7 16.5 157 54-228 26-205 (433)
29 3ife_A Peptidase T; metallopep 99.4 1E-12 3.5E-17 140.5 13.3 140 54-227 27-225 (434)
30 3dlj_A Beta-Ala-His dipeptidas 99.4 5.7E-12 1.9E-16 136.7 18.3 152 54-227 25-208 (485)
31 3gb0_A Peptidase T; NP_980509. 99.4 3E-12 1E-16 133.7 13.6 149 51-229 3-169 (373)
32 2v8h_A Beta-alanine synthase; 99.3 5.2E-12 1.8E-16 136.7 13.7 128 50-210 28-175 (474)
33 1z2l_A Allantoate amidohydrola 99.3 4.9E-12 1.7E-16 134.4 12.4 126 53-210 8-145 (423)
34 3tx8_A Succinyl-diaminopimelat 99.3 9.9E-12 3.4E-16 129.5 14.5 139 54-227 13-167 (369)
35 2rb7_A Peptidase, M20/M25/M40 99.3 4E-12 1.4E-16 132.7 11.5 139 52-226 4-164 (364)
36 1vgy_A Succinyl-diaminopimelat 99.3 1.6E-11 5.3E-16 129.4 14.1 141 53-227 5-168 (393)
37 3rza_A Tripeptidase; phosphory 99.3 1.1E-11 3.9E-16 130.6 13.0 155 46-228 16-189 (396)
38 3khx_A Putative dipeptidase sa 99.3 4.3E-11 1.5E-15 130.2 15.9 136 53-226 33-197 (492)
39 1fno_A Peptidase T; metallo pe 99.3 1.9E-11 6.6E-16 129.6 12.3 138 55-227 3-198 (417)
40 3isz_A Succinyl-diaminopimelat 99.3 5.2E-11 1.8E-15 123.8 15.1 140 54-227 3-165 (377)
41 3pfe_A Succinyl-diaminopimelat 99.2 5.8E-11 2E-15 128.4 14.7 147 54-227 18-193 (472)
42 1lfw_A PEPV; hydrolase, dipept 99.2 1.4E-10 4.8E-15 124.8 17.1 126 53-213 13-168 (470)
43 3mru_A Aminoacyl-histidine dip 99.2 2.6E-11 9E-16 131.8 11.4 141 48-227 8-175 (490)
44 2f7v_A Aectylcitrulline deacet 99.2 7.7E-11 2.6E-15 123.1 13.2 131 53-227 8-160 (369)
45 1ylo_A Hypothetical protein SF 99.2 4.3E-10 1.5E-14 116.4 17.4 218 58-328 7-337 (348)
46 1vho_A Endoglucanase; structur 99.1 7E-10 2.4E-14 114.9 17.1 221 55-329 6-336 (346)
47 1xmb_A IAA-amino acid hydrolas 99.1 5.3E-10 1.8E-14 118.8 15.9 135 54-225 28-176 (418)
48 2qyv_A XAA-His dipeptidase; YP 99.1 2E-10 7E-15 124.4 13.0 140 50-228 7-173 (487)
49 3kl9_A PEPA, glutamyl aminopep 99.1 1.3E-09 4.4E-14 113.9 17.5 223 54-328 3-345 (355)
50 3cpx_A Aminopeptidase, M42 fam 99.1 1.5E-10 5.3E-15 119.1 10.3 218 56-326 19-320 (321)
51 1ysj_A Protein YXEP; M20 famil 99.1 7.2E-10 2.5E-14 117.2 14.9 137 53-224 31-181 (404)
52 3ram_A HMRA protein; two-domai 99.0 2.1E-09 7.1E-14 113.5 11.6 140 54-227 16-158 (394)
53 2vpu_A TET3, 354AA long hypoth 98.9 4.1E-08 1.4E-12 102.5 16.7 151 161-329 182-349 (354)
54 3io1_A Aminobenzoyl-glutamate 98.8 3.6E-08 1.2E-12 105.7 14.1 158 54-226 14-210 (445)
55 3isx_A Endoglucanase; TM1050, 98.5 7E-07 2.4E-11 92.7 14.2 212 56-324 13-341 (343)
56 2wzn_A TET3, 354AA long hypoth 98.4 7.4E-06 2.5E-10 81.5 17.3 58 268-330 293-350 (354)
57 3iib_A Peptidase M28; YP_92679 95.7 0.0089 3E-07 63.8 5.4 43 51-93 18-60 (444)
58 2ek8_A Aminopeptidase; metallo 94.2 0.06 2E-06 56.8 6.7 44 48-93 10-53 (421)
59 2ijz_A Probable M18-family ami 88.3 0.6 2.1E-05 49.5 6.4 142 160-311 231-412 (428)
60 3kas_A Transferrin receptor pr 88.0 0.13 4.6E-06 57.3 1.1 45 50-94 14-59 (640)
61 3fed_A Glutamate carboxypeptid 87.3 0.55 1.9E-05 52.9 5.6 44 49-94 20-63 (707)
62 2glj_A Probable M18-family ami 77.8 0.79 2.7E-05 49.0 1.9 43 161-207 258-300 (461)
63 2glf_A Probable M18-family ami 76.5 1.1 3.9E-05 47.7 2.7 41 161-206 246-286 (450)
64 1y7e_A Probable M18-family ami 75.1 0.45 1.6E-05 50.9 -0.9 44 161-207 252-295 (458)
65 3vat_A Dnpep, aspartyl aminope 53.4 5.1 0.00017 43.1 2.0 46 161-207 282-331 (496)
66 2ijz_A Probable M18-family ami 52.4 7.3 0.00025 41.1 3.0 74 72-157 13-86 (428)
67 1q7l_B Aminoacylase-1; catalys 47.3 40 0.0014 26.6 6.1 58 268-330 23-81 (88)
68 2glf_A Probable M18-family ami 45.2 18 0.00063 38.3 4.7 66 76-157 32-97 (450)
69 3vat_A Dnpep, aspartyl aminope 37.7 22 0.00076 38.1 3.9 66 74-156 49-119 (496)
70 4eme_A M18 aspartyl aminopepti 27.3 1E+02 0.0034 33.6 6.9 69 76-156 22-91 (571)
71 1y7e_A Probable M18-family ami 22.2 33 0.0011 36.4 1.9 64 78-157 36-100 (458)
72 2glj_A Probable M18-family ami 20.8 26 0.00088 37.3 0.7 66 79-157 39-106 (461)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.4e-41 Score=346.27 Aligned_cols=253 Identities=18% Similarity=0.165 Sum_probs=192.6
Q ss_pred cCcCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccc
Q 008900 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (549)
Q Consensus 48 ~~~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~ 127 (549)
.++||++||++++++|+ ++|||.+||++++++++||+++|+++| ++++.+.....+ ....+.+
T Consensus 19 ~p~f~~~~a~~~l~~l~-~fgpR~~gS~~~~~a~~~i~~~l~~~g------~~v~~q~~~~~~----------~~~~~~~ 81 (309)
T 4fuu_A 19 VPQFDADSAYLYVKNQV-DFGPRVPNTKEHVACGNYLAGKLEAFG------AKVTNQYADLIA----------YDGTLLK 81 (309)
T ss_dssp CCCCCHHHHHHHHHHHH-TTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC----------TTSCEEE
T ss_pred CCccCHHHHHHHHHHHh-CcCCcCCCCHHHHHHHHHHHHHHHHcC------CeeEEEeEEecc----------CCCCcce
Confidence 45899999999999999 799999999999999999999999999 566655433211 0112345
Q ss_pred cceEEEEEeCCCCCCCCCeEEEeeecCCCCCC-------------CCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 008900 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (549)
Q Consensus 128 ~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf 194 (549)
..|||++++|+. ++.|+++|||||++.+ |||+||++|||+|||++|.|.+. +|+++|+|+|
T Consensus 82 ~~Nii~~~~g~~----~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~ 155 (309)
T 4fuu_A 82 ARNIIGSYKPES----KKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIF 155 (309)
T ss_dssp EEEEEEEESTTC----SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEE
T ss_pred eEEEEEEECCCC----CceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEe
Confidence 689999999863 5789999999999753 69999999999999999999875 7899999999
Q ss_pred eCcccCCC--------------cchHHHHhhcC-ccCcccEEEEeccCCCCCCceEEecCCCCc---hhhHhhhhccccc
Q 008900 195 NGAEELFM--------------LGAHGFMKAHK-WRDSVGAVINVEASGTGGLDLVCQSGPSSW---PSSVYAQSAIYPM 256 (549)
Q Consensus 195 ~~~EE~gl--------------~GS~~f~~~~~-~~~~v~a~INLD~~G~gg~~~lfq~~p~~~---~~~~y~~~~~~p~ 256 (549)
|++||.|+ .||+.|+++++ ...++.++||+|++|.+++.+..+.....+ +.+...+......
T Consensus 156 ~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T 4fuu_A 156 LDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKAG 235 (309)
T ss_dssp ECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHTT
T ss_pred ecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHhcC
Confidence 99999995 89999998764 457899999999999888776655432211 1111111111000
Q ss_pred cccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecC----CCcCCCccCCcCCCCHHHHHHHHHHHHHHHH
Q 008900 257 AHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIG----GYYYHTSHDTVDRLLPGSVQARGDNLFNVLK 325 (549)
Q Consensus 257 ~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~----~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~ 325 (549)
......+..+ ....|||.+|.+ .+|||++++..... .++|||++||+|+||+++||++|+++++++.
T Consensus 236 ~~~~~~~~~~-~~~~sDh~~F~~-~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly 306 (309)
T 4fuu_A 236 YGKTFIDERG-DTITDDHLFINR-LARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIY 306 (309)
T ss_dssp CTTTEEEEEC-CCCCCHHHHHHH-HTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHH
T ss_pred CcccccccCC-CCCCCChHHHHh-cCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHh
Confidence 0000000011 223589999985 47999999975432 2389999999999999999999999999885
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=2.8e-37 Score=318.05 Aligned_cols=254 Identities=16% Similarity=0.175 Sum_probs=186.0
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceE
Q 008900 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (549)
Q Consensus 52 s~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NV 131 (549)
++.+..+.|+.+ ++||.+||++++++++||+++|+++| ++++++....... .....+..||
T Consensus 9 ~~~~~~~~l~~i---l~PR~~gs~~~~~~~~~i~~~l~~~g------~~v~~~~f~~~~~----------~~~~~~~~Ni 69 (312)
T 4f9u_A 9 DEVHFNRTLDSI---LVPRVVGSRGHQQVREYLVQSLNGLG------FQTEVDEFKQRVP----------VFGELTFANV 69 (312)
T ss_dssp CHHHHHHHHHHH---CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET----------TTEEEEEEEE
T ss_pred HHHHHHHHHHHh---cCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEeEEEecC----------CCCceeEEEE
Confidence 445555556555 46999999999999999999999999 6777765433211 0112456899
Q ss_pred EEEEeCCCCCCCCCeEEEeeecCCCC-----CCCCCCCCchHHHHHHHHHHHHHh-----cCCCCCCCEEEEEeCcccCC
Q 008900 132 VMRISSTDSQDTDPSVLMNGHFDGPL-----SSPGAGDCGSCVASMLELARLTID-----SGWIPPRPIIFLFNGAEELF 201 (549)
Q Consensus 132 i~~i~G~~~~~~~~~Vll~aH~Dsv~-----~spGA~Dd~sgva~~LE~ar~L~~-----~~~~p~~~I~flf~~~EE~g 201 (549)
|++++|+ ++++|+++|||||++ .++||+||+||||+|||++|.|.+ .+.+|+|+|+|+||++||.|
T Consensus 70 i~~~~~~----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G 145 (312)
T 4f9u_A 70 VGTINPQ----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAF 145 (312)
T ss_dssp EEEESTT----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCS
T ss_pred EEEECCC----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCcccc
Confidence 9999986 357899999999985 368999999999999999999965 24689999999999999988
Q ss_pred --------CcchHHHHhhcCcc-------------CcccEEEEeccCCCCCCceEEecCCCCchh----hHhh---hhcc
Q 008900 202 --------MLGAHGFMKAHKWR-------------DSVGAVINVEASGTGGLDLVCQSGPSSWPS----SVYA---QSAI 253 (549)
Q Consensus 202 --------l~GS~~f~~~~~~~-------------~~v~a~INLD~~G~gg~~~lfq~~p~~~~~----~~y~---~~~~ 253 (549)
+.||+.|++++++. +++.++||+|++|..++..........+.. ++.+ +...
T Consensus 146 ~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 225 (312)
T 4f9u_A 146 KEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRTAGQ 225 (312)
T ss_dssp SSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHHhcc
Confidence 99999999986432 468899999999988776432211111111 1111 1111
Q ss_pred ccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 008900 254 YPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (549)
Q Consensus 254 ~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~~ 330 (549)
.+...............+|||.+|.+ .|||++++.....+++|||+.||+|+||+++++++++.+..++.+....
T Consensus 226 ~~~~~~~~~~~~~~~~~~SDH~pF~~--~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~ 300 (312)
T 4f9u_A 226 LEGNNNMFLSRVSGGLVDDDHRPFLD--ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKR 300 (312)
T ss_dssp SSSSCCCEEEEECSSCCCCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCCCchHHHHH--CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11000000001111224689999986 7999999987766678999999999999999999999999998776543
No 3
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=3.1e-36 Score=310.25 Aligned_cols=255 Identities=19% Similarity=0.219 Sum_probs=194.1
Q ss_pred CCcCcCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccc
Q 008900 46 APLDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (549)
Q Consensus 46 ~~~~~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~ 125 (549)
....+|+++|+++++++|+ ++++|..||++++++++||.++|+++| ++++++.....+ + ...+
T Consensus 17 ~~~~~~~~~~~~~~l~~l~-~~~~R~~~s~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~-~---------~g~~ 79 (309)
T 3tc8_A 17 SAVPDFNADSAYAYVANQV-AFGPRVPNTAAHKACGDYLASELKRFG------AKVYQQEAILTA-Y---------DGTK 79 (309)
T ss_dssp CCSCCCCHHHHHHHHHHHH-HTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC-T---------TSCE
T ss_pred hcccccCHHHHHHHHHHHH-ccCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEEeeccc-c---------CCCc
Confidence 3467899999999999999 799999999999999999999999998 666665432211 0 0123
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeeecCCCCCC-------------CCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEE
Q 008900 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (549)
Q Consensus 126 ~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 192 (549)
.+..|||++++|+ +++.|+++||+|||+.+ +||.||++|||++||++|.|.+. +|+++|+|
T Consensus 80 ~~~~Nvia~~~g~----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 80 LEARNIIGSFDPE----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEEESTT----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred ccceEEEEEECCC----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 4568999999985 35789999999999876 79999999999999999999987 48999999
Q ss_pred EEeCcccCCC-------------cchHHHHhhcCc-cCcccEEEEeccCCCCCCceEEecCCCCc---hhhHhhhhcccc
Q 008900 193 LFNGAEELFM-------------LGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPSSW---PSSVYAQSAIYP 255 (549)
Q Consensus 193 lf~~~EE~gl-------------~GS~~f~~~~~~-~~~v~a~INLD~~G~gg~~~lfq~~p~~~---~~~~y~~~~~~p 255 (549)
+++++||.|+ .||+.|+++++. .++++++||+|++|.+++.+........| +.+.+.+.+ ..
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~~~~~~~~~~l~~~~~~~a-~~ 232 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKEQQSLRAAAPIVEMVWSAA-RD 232 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEECHHHHHHHHHHHHHHHHHH-HH
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeecccccchHHHHHHHHHHHH-HH
Confidence 9999999999 999999985543 36899999999999988765332111112 122221211 11
Q ss_pred ccc-cccccccCCCCCCCchHHHhhcCCCCcEEEEEEe------cCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHH
Q 008900 256 MAH-SAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFL------IGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (549)
Q Consensus 256 ~~~-~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~------~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (549)
.+. ...++..+ -...|||.+|.+ +.|||++++... ...++|||+.||+|+||+++++++++++++++.+
T Consensus 233 ~g~~~~f~~~~~-g~~~sDh~~f~~-~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~vy~ 308 (309)
T 3tc8_A 233 LGYGKYFINAAG-GAITDDHQYVIS-GRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVIYN 308 (309)
T ss_dssp HTCTTTEEEEEC-CCCCCHHHHHHH-HHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred cCCcceeccCCC-CCCCCccHHHHh-cCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHhc
Confidence 110 00011000 112689999986 359999999754 2346999999999999999999999999999864
No 4
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=9e-37 Score=317.05 Aligned_cols=255 Identities=17% Similarity=0.182 Sum_probs=184.5
Q ss_pred cCcHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceecccccccccccc
Q 008900 50 RFSEARAIQHVRVLADE-IGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (549)
Q Consensus 50 ~fs~era~~~l~~La~~-ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~ 128 (549)
+|+..+...|++++.+. ++||.+||++++++++||.++|+++| ++++.+....... .....+.
T Consensus 30 ~~~~~~~~~~~~~~l~~il~pR~~Gs~~~~~~~~~i~~~l~~~g------~~v~~q~f~~~~~----------~~~~~~~ 93 (330)
T 4fai_A 30 EYSNLSDKLHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLD------WDVEVNSFHDHAP----------IKGKLHF 93 (330)
T ss_dssp HHHTCCCHHHHHHHHHHHCSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET----------TTEEEEE
T ss_pred hcccccHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEeeeeeecC----------CCCceeE
Confidence 34444445566555433 57999999999999999999999998 7777765433211 0122456
Q ss_pred ceEEEEEeCCCCCCCCCeEEEeeecCCCCC----CCCCCCCchHHHHHHHHHHHHHh---cCCCCCCCEEEEEeCcccCC
Q 008900 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLS----SPGAGDCGSCVASMLELARLTID---SGWIPPRPIIFLFNGAEELF 201 (549)
Q Consensus 129 ~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~----spGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~flf~~~EE~g 201 (549)
.|||++++|+ .+++|+++|||||++. .+||+||++|||+|||++|.|.+ .+++|+++|+|+||+|||.|
T Consensus 94 ~Nii~~~~~~----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~G 169 (330)
T 4fai_A 94 HNIIATLNPN----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAF 169 (330)
T ss_dssp EEEEEESCTT----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCS
T ss_pred EEEEEEECCC----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccc
Confidence 8999999885 3578999999999864 47999999999999999999965 45789999999999999998
Q ss_pred C--------cchHHHHhhc---CccCcccEEEEeccCCCCCCceEEecCCCCc-hhhH---hhhhc------ccc---cc
Q 008900 202 M--------LGAHGFMKAH---KWRDSVGAVINVEASGTGGLDLVCQSGPSSW-PSSV---YAQSA------IYP---MA 257 (549)
Q Consensus 202 l--------~GS~~f~~~~---~~~~~v~a~INLD~~G~gg~~~lfq~~p~~~-~~~~---y~~~~------~~p---~~ 257 (549)
+ .||+.|+++. ...+++.++||+|++|.+++.+.....+..+ .... ..+.. ..+ ..
T Consensus 170 l~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (330)
T 4fai_A 170 EEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVA 249 (330)
T ss_dssp SSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC----------
T ss_pred ccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhccccc
Confidence 5 7999999864 2347899999999999988776544322211 1111 00000 000 00
Q ss_pred cccccccc-----CCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHH
Q 008900 258 HSAAQDVF-----PVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (549)
Q Consensus 258 ~~~~~~~f-----~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (549)
.......| ......|||.+|.+ .|||++++.....+++|||+.||+|+||+++++++++.+..++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~SDH~pF~~--~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 250 QRDPTRYFQSQAMRSSFIEDDHIPFLR--RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp -----CCEEEEEETTCCCCSTTHHHHT--TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCCCCCchHHHHH--CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 00000011 11123689999986 799999997666667999999999999999999999998887754
No 5
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=100.00 E-value=1.6e-37 Score=346.41 Aligned_cols=273 Identities=20% Similarity=0.181 Sum_probs=220.4
Q ss_pred ccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHHHHh----cCCCCCCCEEEEEeCcccCCC
Q 008900 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTID----SGWIPPRPIIFLFNGAEELFM 202 (549)
Q Consensus 127 ~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~----~~~~p~~~I~flf~~~EE~gl 202 (549)
++.||+++++|+. .++++|+++||+|||. +||.||++|+|++||++|.|.+ .+++|+|+|+|++|++||.|+
T Consensus 265 ~~~NVi~~i~G~~--~~~~~vvvgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl 340 (640)
T 3kas_A 265 KILNIFGVIKGFV--EPDHYVVVGAQRDAWG--PGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGS 340 (640)
T ss_dssp EEEEEEEEECCSS--EEEEEEEEEEECCCSS--CCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTS
T ss_pred eEEEEEEEEeCCc--CCCCceeeecccCCCC--CCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCc
Confidence 5679999999973 3578999999999996 9999999999999999999975 478999999999999999999
Q ss_pred cchHHHHhhcC--ccCcccEEEEeccCCCCCCceEEecCCC-CchhhHhhhhccccccc-ccccc-c----cCCCCCCCc
Q 008900 203 LGAHGFMKAHK--WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMAH-SAAQD-V----FPVIPGDTD 273 (549)
Q Consensus 203 ~GS~~f~~~~~--~~~~v~a~INLD~~G~gg~~~lfq~~p~-~~~~~~y~~~~~~p~~~-~~~~~-~----f~~ips~sD 273 (549)
.||++|+++|. +.++++++||+|++|.|++.+.++++|. .+++..+.+.+++|... ++.++ . .+.++++||
T Consensus 341 ~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~sD 420 (640)
T 3kas_A 341 VGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNA 420 (640)
T ss_dssp HHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTTST
T ss_pred hhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCCcc
Confidence 99999999883 4589999999999999888889998885 23344455677888753 44442 2 256889999
Q ss_pred hHHHhhcCCCCcEEEEEEecC-CC-cCCCccCCcCCCCH------HHHHHHHHHHHHHHHHHhcCcCcc-cchhhh----
Q 008900 274 YRIFSQDYGDIPGLDIIFLIG-GY-YYHTSHDTVDRLLP------GSVQARGDNLFNVLKAFSNSSKLQ-NAHDRA---- 340 (549)
Q Consensus 274 ~~~F~~~~~giPgld~a~~~~-~y-~YHT~~Dt~d~id~------~~lq~~g~~~l~l~~~la~~~~l~-~~~~~~---- 340 (549)
|.+|.+ +.|||++|++|..+ .| +|||.+||+++++. ..++.+++.+..++..|++++.|| |..+|.
T Consensus 421 ~~~F~~-~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~~~y~~~l~ 499 (640)
T 3kas_A 421 AFPFLA-YSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDYERYNSQLL 499 (640)
T ss_dssp HHHHHH-HHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCTTHHHHHHH
T ss_pred hHHHHH-hCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 999985 68999999999865 45 69999999998753 367788899999999999999888 655542
Q ss_pred ----hhhhhcCCCCCCceeEccchhhhhhHccHHHHHHHhhhhHHHhhccceEEEEecccchhHHHHHHH
Q 008900 341 ----SFEATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSGLHSWFATYSD 406 (549)
Q Consensus 341 ----~~~~~~~~~~~~~~V~fd~lg~~~~~y~~~~a~~l~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 406 (549)
+++. .....+...+.|+.|..++..|.. +|..|+..+......++..+|++|+|+|.+||.|++
T Consensus 500 ~~~~~l~~-~~~~~~~~~~~~~~l~~a~~~f~~-aa~~~~~~~~~~~~~~~~~~r~~N~~l~~~er~fl~ 567 (640)
T 3kas_A 500 SFVRDLNQ-YRADIKEMGLSLQWLYSARGDFFR-ATSRLTTDFGNAEKTDRFVMKKLNDRVMRVEYHFLS 567 (640)
T ss_dssp HHHHHHGG-GTTTTTTTTCCCHHHHHHHHHHHH-HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHGGGGBC
T ss_pred HHHHHHHH-HHHhhhccCCChHHHHHHHHHHHH-HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhhcC
Confidence 2222 223344457999999999999998 567777655544445566788999999999997644
No 6
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=1.3e-35 Score=306.01 Aligned_cols=252 Identities=20% Similarity=0.228 Sum_probs=175.0
Q ss_pred cCcCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccc
Q 008900 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (549)
Q Consensus 48 ~~~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~ 127 (549)
.++|+++|+++++++|+ +|++|..||++++++++||.++|+++| ++++++.....+ + ...+.+
T Consensus 21 ~~~~~~~~~~~~l~~L~-~~~~R~~gs~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~-~---------~g~~~~ 83 (314)
T 3gux_A 21 APEFDADSAYQYIQVQA-DFGPRVPNTQAHKECGEYLAGQLEKFG------AKVYNQYADLIA-Y---------DGTILK 83 (314)
T ss_dssp CCCCCHHHHHHHHHHHH-TTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC-T---------TSCEEE
T ss_pred CCCCCHHHHHHHHHHHH-ccCCcCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEeeccc-c---------CCCccc
Confidence 36899999999999999 899999999999999999999999998 666665432211 0 012235
Q ss_pred cceEEEEEeCCCCCCCCCeEEEeeecCCCCCC-------------CCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 008900 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (549)
Q Consensus 128 ~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf 194 (549)
..|||++++|+ +++.|+++||+|||+.+ +||.||++|||++||++|.|.+. +|+++|+|++
T Consensus 84 ~~Nvia~~~g~----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv~ 157 (314)
T 3gux_A 84 SRNIIGAYKPE----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIVF 157 (314)
T ss_dssp EEEEEEEESTT----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEEE
T ss_pred ceEEEEEECCC----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEEE
Confidence 68999999985 35789999999999865 79999999999999999999987 4899999999
Q ss_pred eCcccCCC--------------cchHHHHhhcCc-cCcccEEEEeccCCCCCCceEEecCCC-C---chhhHhhhhcccc
Q 008900 195 NGAEELFM--------------LGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-S---WPSSVYAQSAIYP 255 (549)
Q Consensus 195 ~~~EE~gl--------------~GS~~f~~~~~~-~~~v~a~INLD~~G~gg~~~lfq~~p~-~---~~~~~y~~~~~~p 255 (549)
+++||.|+ .||+.|+++++. ..+++++||+|++|..++.+ ++.++. . ++.+.+.+.+. .
T Consensus 158 ~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~~-~~~g~~~~~~~~l~~~~~~~~~-~ 235 (314)
T 3gux_A 158 FDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDATF-YYEGYSARTARSEMKKIWKKAH-E 235 (314)
T ss_dssp ECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCE-EECTTHHHHCHHHHHHHHHHHH-H
T ss_pred ECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCce-eeeccccccHHHHHHHHHHHHH-H
Confidence 99999999 999999985543 37899999999999988764 444432 1 22222222111 1
Q ss_pred ccc-cccccccCCCCCCCchHHHhhcCCCCcEEEEEEec-----C--CCcCCCccCCcCCCCHHHHHHHHHHHHHHHHH
Q 008900 256 MAH-SAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLI-----G--GYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (549)
Q Consensus 256 ~~~-~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~-----~--~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (549)
.+. ...++..+ -...|||.+|.+ ..|||++++.... + .++|||+.||+|+||+++++++++++++++.+
T Consensus 236 ~g~~~~f~~~~~-~~~~sDh~pF~~-~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~~y~ 312 (314)
T 3gux_A 236 LGYGKYFVKEDG-GETVDDHIYVNK-LARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDVIYN 312 (314)
T ss_dssp HTCTTTEEEEEC-CCCCCHHHHHHH-HSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHHHHT
T ss_pred cCCccccccccC-CCCCCccHHHHh-cCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHHHhh
Confidence 110 00011011 123699999986 3599999997653 1 25899999999999999999999999999864
No 7
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=100.00 E-value=3.7e-36 Score=338.47 Aligned_cols=275 Identities=23% Similarity=0.245 Sum_probs=216.1
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHHHHh---cCCCCCCCEEEEEeCcccCCC
Q 008900 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTID---SGWIPPRPIIFLFNGAEELFM 202 (549)
Q Consensus 126 ~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~flf~~~EE~gl 202 (549)
.++.||+++++|+. .++++|+++||+|||+ +||.||++|+|++||++|.|.+ .||+|+|+|+|++|++||.|+
T Consensus 310 ~~~~NVi~~i~G~~--~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl 385 (707)
T 3fed_A 310 TRIYNVVGTIRGSV--EPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGL 385 (707)
T ss_dssp EEEEEEEEEECCSS--EEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS
T ss_pred EEEEEEEEEEeCCC--CCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccc
Confidence 35789999999974 3578999999999998 7999999999999999999975 588999999999999999999
Q ss_pred cchHHHHhhcC--ccCcccEEEEeccCCCCCCceEEecCCC-CchhhHhhhhcccccc----cccccccc----------
Q 008900 203 LGAHGFMKAHK--WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMA----HSAAQDVF---------- 265 (549)
Q Consensus 203 ~GS~~f~~~~~--~~~~v~a~INLD~~G~gg~~~lfq~~p~-~~~~~~y~~~~~~p~~----~~~~~~~f---------- 265 (549)
.||++|+++|+ +.++++++||+|++|.|+..+.++++|. .+++..+.+.+++|.+ .++.+.++
T Consensus 386 ~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~~~ 465 (707)
T 3fed_A 386 LGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKN 465 (707)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTEEE
T ss_pred hhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccccC
Confidence 99999999885 5689999999999999988899999886 2444555677888865 23332211
Q ss_pred ----CCCCCCCchHHHhhcCCCCcEEEEEEecC-------CC-cCCCccCCcCCC----CHH--HHHHHHHHHHHHHHHH
Q 008900 266 ----PVIPGDTDYRIFSQDYGDIPGLDIIFLIG-------GY-YYHTSHDTVDRL----LPG--SVQARGDNLFNVLKAF 327 (549)
Q Consensus 266 ----~~ips~sD~~~F~~~~~giPgld~a~~~~-------~y-~YHT~~Dt~d~i----d~~--~lq~~g~~~l~l~~~l 327 (549)
+.++++|||.+|.+ +.|||++|++|..+ .| .|||.+||++++ ||+ ..+.+++.+..++.+|
T Consensus 466 ~p~i~~lgsgSD~~~F~~-~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~L 544 (707)
T 3fed_A 466 LPRINKLGSGSDFEAYFQ-RLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYEL 544 (707)
T ss_dssp EECEECCCSSSTTHHHHH-TTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCCChHHHHH-hCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 23568999999985 79999999999854 45 799999999976 444 5666788999999999
Q ss_pred hcCcCcc-cchhhhh--------h---hhhcCCCCCCceeEccchhhhhhHccHHHHHHHhhhhHHHhhccceEEEEecc
Q 008900 328 SNSSKLQ-NAHDRAS--------F---EATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNS 395 (549)
Q Consensus 328 a~~~~l~-~~~~~~~--------~---~~~~~~~~~~~~V~fd~lg~~~~~y~~~~a~~l~~~~~~~~~~~~~~~~~~n~ 395 (549)
++++.|| |..+|.. + +...+...+...+.|+.|..++..|.. +|..++..+..+....+..+|++|+
T Consensus 545 a~~~vlP~~~~~ya~~l~~~~~~l~~~~~~~~~~l~~~~~~~~~L~~a~~~~~~-~a~~~~~~~~~~~~~~~~~~r~~N~ 623 (707)
T 3fed_A 545 VDSKIIPFNIQDYAEALKNYAASIYNLSKKHDQQLTDHGVSFDSLFSAVKNFSE-AASDFHKRLIQVDLNNPIAVRMMND 623 (707)
T ss_dssp HHCSSCCCCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHTCCCHHHHHHHHHHHH-HHHHHHHHHTTCCTTCHHHHHHHHH
T ss_pred hCCccCCCCHHHHHHHHHHHHHHHHHHHHhhcchhhhcCcCHHHHHHHHHHHHH-HHHHHHHHHHhhhcCCHHHHHHHHH
Confidence 9999888 6544421 1 111222223346889999999999977 5677766444333445667889999
Q ss_pred cchhHHHHHHH
Q 008900 396 GLHSWFATYSD 406 (549)
Q Consensus 396 ~~~~~~~~~~~ 406 (549)
++|.+||.|+.
T Consensus 624 ~l~~~Er~fl~ 634 (707)
T 3fed_A 624 QLMLLERAFID 634 (707)
T ss_dssp HHHHHHHHTBC
T ss_pred HHHHHHHHhcC
Confidence 99999997644
No 8
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=2.8e-34 Score=297.77 Aligned_cols=255 Identities=19% Similarity=0.205 Sum_probs=188.5
Q ss_pred cCcCcHHHHHH-HHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceecccccccccc
Q 008900 48 LDRFSEARAIQ-HVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYR 126 (549)
Q Consensus 48 ~~~fs~era~~-~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~ 126 (549)
+.+|+.+|+++ +|+.+ +++|..||++++++++||.++|++++. .+++++|....... ....
T Consensus 33 ~~~~~~~~~~~~~L~~~---~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~~-----------~g~~ 94 (330)
T 3pb6_X 33 VGQLDPQRLWSTYLRPL---LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTASTP-----------LGPV 94 (330)
T ss_dssp HHTCCHHHHHHHTTGGG---CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEET-----------TEEE
T ss_pred cccCCHHHHHHHHHHHH---hCCCCCCCHHHHHHHHHHHHHHHHhCC----CCeEEEEeeecccc-----------cCCc
Confidence 35799999988 67766 789999999999999999999999941 15666665332110 0134
Q ss_pred ccceEEEEEeCCCCCCCCCeEEEeeecCCCCC------CCCCCCCchHHHHHHHHHHHHHhc-----CCCCCCCEEEEEe
Q 008900 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS------SPGAGDCGSCVASMLELARLTIDS-----GWIPPRPIIFLFN 195 (549)
Q Consensus 127 ~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~------spGA~Dd~sgva~~LE~ar~L~~~-----~~~p~~~I~flf~ 195 (549)
+..|||++++|+. ++.|+++|||||++. .+||.||++|||++||++|.|.+. +.+|+++|.|+++
T Consensus 95 ~~~Nvia~~~g~~----~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~ 170 (330)
T 3pb6_X 95 DFGNVVATLDPRA----ARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFL 170 (330)
T ss_dssp EEEEEEEESCTTS----SEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEE
T ss_pred cceEEEEEECCCC----CceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEE
Confidence 5689999999862 478999999999863 389999999999999999999863 3579999999999
Q ss_pred CcccC--------CCcchHHHHhhcC---------ccCcccEEEEeccCCCCCCceEEecCCC-CchhhHhh---hhc--
Q 008900 196 GAEEL--------FMLGAHGFMKAHK---------WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYA---QSA-- 252 (549)
Q Consensus 196 ~~EE~--------gl~GS~~f~~~~~---------~~~~v~a~INLD~~G~gg~~~lfq~~p~-~~~~~~y~---~~~-- 252 (549)
++||. |+.||+.|+++.. ..++++++||+|++|..++.+. ...+. .+..+... +..
T Consensus 171 ~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~-~~~~~t~~~~~~l~~i~~~~~~ 249 (330)
T 3pb6_X 171 DGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFY-SHFPRTVRWFHRLRSIEKRLHR 249 (330)
T ss_dssp SCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBC-CCCGGGHHHHHHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCce-eecCcchHHHHHHHHHHHHHHH
Confidence 99999 9999999997532 3478999999999999887642 11121 11111111 100
Q ss_pred -----cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHH
Q 008900 253 -----IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAF 327 (549)
Q Consensus 253 -----~~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~l 327 (549)
.+|................|||.+|.+ .|||++++......+.|||+.||+|+||+++++++++.+..++.+.
T Consensus 250 ~g~~~~~p~~~~~f~~~~~~~~~~SDH~pF~~--~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 250 LNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLR--RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEY 327 (330)
T ss_dssp TTCCSSCCSSCSSBCSSCSSCCCSCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cCccccCCcccccccccccCCCCCCchHhHHH--CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 011111110000001224799999996 8999999986555568999999999999999999999999987653
No 9
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=100.00 E-value=6.1e-33 Score=282.14 Aligned_cols=252 Identities=20% Similarity=0.313 Sum_probs=194.7
Q ss_pred CcCcHHHHHHHHHHHHHhc-----CCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccc
Q 008900 49 DRFSEARAIQHVRVLADEI-----GDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISL 123 (549)
Q Consensus 49 ~~fs~era~~~l~~La~~i-----g~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~ 123 (549)
.+++.+++.+++++|+ +| ++|..++++++++++||.++++++| ++++++.....+
T Consensus 2 ~~i~~~~~~~~l~~L~-~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g------~~v~~~~~~~~~------------- 61 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLS-TIAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSGG------------- 61 (284)
T ss_dssp CCCCHHHHHHHHHHHH-HHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEETT-------------
T ss_pred CcCCHHHHHHHHHHHH-cccccCCCCCCCCCHHHHHHHHHHHHHHHHcC------CeEEEEEeccCC-------------
Confidence 3678999999999998 44 3677888888999999999999998 566665432111
Q ss_pred cccccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCc
Q 008900 124 GYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFML 203 (549)
Q Consensus 124 ~~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~ 203 (549)
.+..||+++++|++ +++.|++++|+|+|+.++|+.||++|++++||++|.|++.+++++++|+|+|+++||.|+.
T Consensus 62 --~~~~nvi~~~~g~~---~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 136 (284)
T 1tkj_A 62 --ATGYNLIANWPGGD---PNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLI 136 (284)
T ss_dssp --EEEEEEEEECSCSE---EEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSH
T ss_pred --CCceeEEEEEeCCC---CCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCc
Confidence 12469999998853 3578999999999999999999999999999999999998888999999999999999999
Q ss_pred chHHHHhhcCc--cCcccEEEEeccCCCCCCceEEecCCCCchhhHhhhhc---cccccccccccccCCCCCCCchHHHh
Q 008900 204 GAHGFMKAHKW--RDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSA---IYPMAHSAAQDVFPVIPGDTDYRIFS 278 (549)
Q Consensus 204 GS~~f~~~~~~--~~~v~a~INLD~~G~gg~~~lfq~~p~~~~~~~y~~~~---~~p~~~~~~~~~f~~ips~sD~~~F~ 278 (549)
||+.|+++++. .++++++||+|+.|.++..+.+..+ .+.+.+.+.+.. ..|. +.......+|||.+|.
T Consensus 137 Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~~~-~~~l~~~~~~~~~~~gi~~------~~~~~~~~~sD~~~f~ 209 (284)
T 1tkj_A 137 GSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDD-DPVIEKTFKNYFAGLNVPT------EIETEGDGRSDHAPFK 209 (284)
T ss_dssp HHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEECCS-SHHHHHHHHHHHHHHTCCC------EECCSSTTCSTHHHHH
T ss_pred CHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEecC-CHHHHHHHHHHHHHcCCCc------ccCCCCCCCCchHHHH
Confidence 99999998753 3689999999999987654444322 233333332211 1111 1111123579999998
Q ss_pred hcCCCCcEEEEEEec-------------------CCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhcCcCcc
Q 008900 279 QDYGDIPGLDIIFLI-------------------GGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQ 334 (549)
Q Consensus 279 ~~~~giPgld~a~~~-------------------~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~~~~l~ 334 (549)
+ .|||++.+.... ..++|||+.||++++|++.+++.++.+..+++.+++++.+|
T Consensus 210 ~--~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 210 N--VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp H--TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred H--CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 6 799999987541 13489999999999999999999999999999999988765
No 10
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=100.00 E-value=2.6e-33 Score=290.78 Aligned_cols=253 Identities=19% Similarity=0.246 Sum_probs=186.1
Q ss_pred cCcCcHHHH-HHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHc--ccccCCCceeEEEEeeeecCcccceecccccccc
Q 008900 48 LDRFSEARA-IQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEG--IKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (549)
Q Consensus 48 ~~~fs~era-~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~--ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~ 124 (549)
+.+++.+|+ .+++++| +++|..+|++++++++||.++|++ .| ++++++...... ...
T Consensus 25 ~~~~~~~~~~~~~l~~L---~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~~-----------~~g 84 (329)
T 2afw_A 25 AEGTSISEMWQNDLQPL---LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQT-----------PYG 84 (329)
T ss_dssp HHHCCHHHHHHHTTGGG---CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEECC-----------TTS
T ss_pred hhhcCHHHHHHHHHHHH---cCCCCCCCHHHHHHHHHHHHHHHhhCCC------CEEEEEEEEecC-----------CCC
Confidence 457999999 8999888 679999999999999999999999 66 666666533211 011
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeeecCCCCCC-------CCCCCCchHHHHHHHHHHHHHhc--------CCCCCCC
Q 008900 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------PGAGDCGSCVASMLELARLTIDS--------GWIPPRP 189 (549)
Q Consensus 125 ~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~s-------pGA~Dd~sgva~~LE~ar~L~~~--------~~~p~~~ 189 (549)
+.+..||+++++|+ +++.|+++||+||++.+ +||.||++|||++||++|.|.+. +++|+++
T Consensus 85 ~~~~~Nvi~~~~g~----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~ 160 (329)
T 2afw_A 85 YRSFSNIISTLNPT----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLS 160 (329)
T ss_dssp SEEEEEEEEESSTT----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEE
T ss_pred CceEeEEEEEECCC----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCcc
Confidence 23568999999885 35789999999999865 89999999999999999999875 4689999
Q ss_pred EEEEEeCcccC--------CCcchHHHHhhcC------------ccCcccEEEEeccCCCCCCceE--EecCCCCchhhH
Q 008900 190 IIFLFNGAEEL--------FMLGAHGFMKAHK------------WRDSVGAVINVEASGTGGLDLV--CQSGPSSWPSSV 247 (549)
Q Consensus 190 I~flf~~~EE~--------gl~GS~~f~~~~~------------~~~~v~a~INLD~~G~gg~~~l--fq~~p~~~~~~~ 247 (549)
|+|+++++||. |+.||+.|++++. ..++++++||+|++|.+++.+. +..+. ++....
T Consensus 161 i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~~~~~~~~~~~~-~~~~~l 239 (329)
T 2afw_A 161 LQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSA-RWFERL 239 (329)
T ss_dssp EEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSSCCBCCCCGGGH-HHHHHH
T ss_pred EEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCCCceeeeccCcc-hHHHHH
Confidence 99999999998 9999999998652 1457999999999998776542 21211 111100
Q ss_pred --hhhhcccc-c--cccccccccC--CC--CCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHH
Q 008900 248 --YAQSAIYP-M--AHSAAQDVFP--VI--PGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGD 318 (549)
Q Consensus 248 --y~~~~~~p-~--~~~~~~~~f~--~i--ps~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~ 318 (549)
..+..... . ........|. .. ...|||.+|.+ .|||++++......+.|||.+||++++|+++++++++
T Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~--~GiP~~~~~~~~~~~~yHt~~Dt~~~ld~~~l~~~~~ 317 (329)
T 2afw_A 240 QAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR--RGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNK 317 (329)
T ss_dssp HHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT--TTCCEEEECCSSCCTTTTSTTCSSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH--CCCCEEEEEcCCCCCCCCCCCCchhhCCHHHHHHHHH
Confidence 00110000 0 0000011121 11 13699999996 6999999987665679999999999999999999999
Q ss_pred HHHHHHHHH
Q 008900 319 NLFNVLKAF 327 (549)
Q Consensus 319 ~~l~l~~~l 327 (549)
.+..++.+.
T Consensus 318 ~~~~~v~ey 326 (329)
T 2afw_A 318 ILQVFVLEY 326 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877543
No 11
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=100.00 E-value=1.3e-31 Score=274.18 Aligned_cols=264 Identities=17% Similarity=0.197 Sum_probs=193.8
Q ss_pred cCcCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccc
Q 008900 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (549)
Q Consensus 48 ~~~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~ 127 (549)
..+++.+++.+++++|+ ++++|..+|+++.++++||.++++++|.... .++++.....+ .+
T Consensus 14 ~~~~~~~~~~~~l~~L~-~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~---~~~~~~~~~~~---------------~~ 74 (299)
T 1rtq_A 14 LPQVDASQITGTISSLE-SFTNRFYTTTSGAQASDWIASEWQALSASLP---NASVKQVSHSG---------------YN 74 (299)
T ss_dssp GGGCCHHHHHHHHHHHH-TSSCCCTTSHHHHHHHHHHHHHHHHHHTTST---TEEEEEEEETT---------------EE
T ss_pred HHhcCHHHHHHHHHHHh-CcCCCCCCCchHHHHHHHHHHHHHHhcCCcc---cceeeeeccCC---------------CC
Confidence 35789999999999999 7999999999888999999999999874321 13444321111 13
Q ss_pred cceEEEEEeCCCCCCCCCeEEEeeecCCCCC--------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 008900 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLS--------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (549)
Q Consensus 128 ~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~--------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 199 (549)
..||+++++|++ .+++.|++++|+|+|+. ++||.||++|||++||++|.|++.+++|+++|+|+++++||
T Consensus 75 ~~nvi~~~~g~~--~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE 152 (299)
T 1rtq_A 75 QKSVVMTITGSE--APDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEE 152 (299)
T ss_dssp EEEEEEEECCSS--EEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGG
T ss_pred CceEEEEEECCC--CCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCcc
Confidence 479999999863 13578999999999973 69999999999999999999999888899999999999999
Q ss_pred CCCcchHHHHhhcCc-cCcccEEEEeccCCCCC--CceEEecCC-CCchhhHhhhhccccccccccccccCCCCCCCchH
Q 008900 200 LFMLGAHGFMKAHKW-RDSVGAVINVEASGTGG--LDLVCQSGP-SSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYR 275 (549)
Q Consensus 200 ~gl~GS~~f~~~~~~-~~~v~a~INLD~~G~gg--~~~lfq~~p-~~~~~~~y~~~~~~p~~~~~~~~~f~~ips~sD~~ 275 (549)
.|+.||+.|+++++. .+++.++||+|++|..| +.+.+...+ ++.+.+...+.+. .+...+..+.......+|||.
T Consensus 153 ~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~-~~~~~i~~~~~~~~~~~sD~~ 231 (299)
T 1rtq_A 153 VGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMD-EYLPSLTYGFDTCGYACSDHA 231 (299)
T ss_dssp GTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHH-HHCTTCCEEEECCSSCCSTHH
T ss_pred CCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHH-HhCccCCcccCCCCCCCCcHH
Confidence 999999999987743 36789999999998643 334444322 2212111111000 000001001101112579999
Q ss_pred HHhhcCCCCcEEEEEE---ecCCCcCCCccCCcCCCCH--HHHHHHHHHHHHHHHHHhcCcCccc
Q 008900 276 IFSQDYGDIPGLDIIF---LIGGYYYHTSHDTVDRLLP--GSVQARGDNLFNVLKAFSNSSKLQN 335 (549)
Q Consensus 276 ~F~~~~~giPgld~a~---~~~~y~YHT~~Dt~d~id~--~~lq~~g~~~l~l~~~la~~~~l~~ 335 (549)
+|.+ .|||++.+.- .....+|||+.||++++|+ ..++++++.+.+++.+|++++.+.+
T Consensus 232 ~f~~--~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~~ 294 (299)
T 1rtq_A 232 SWHN--AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDTP 294 (299)
T ss_dssp HHHH--TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC---
T ss_pred HHHH--CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence 9986 7999987642 1233589999999999998 5889999999999999999887653
No 12
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.96 E-value=1.2e-28 Score=265.64 Aligned_cols=200 Identities=21% Similarity=0.209 Sum_probs=157.2
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcch
Q 008900 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGA 205 (549)
Q Consensus 126 ~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 205 (549)
.+..||+++++|++ .+++.|++++|+|||+.+|||.||++|++++||++|.|++.+++|+|+|+|++|++||.|+.||
T Consensus 233 ~~~~Nvi~~~~g~~--~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs 310 (444)
T 3iib_A 233 TTSYNVIAEVKGST--KADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGG 310 (444)
T ss_dssp EEEEEEEEEECCST--EEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHH
T ss_pred ceeEEEEEEEeCCC--CCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCH
Confidence 34689999999974 2468999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHhhcCc-cCcccEEEEeccCCCCCCceEEecCCC-CchhhHhhhhccccccccccccccCCCCCCCchHHHhhcCCC
Q 008900 206 HGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGD 283 (549)
Q Consensus 206 ~~f~~~~~~-~~~v~a~INLD~~G~gg~~~lfq~~p~-~~~~~~y~~~~~~p~~~~~~~~~f~~ips~sD~~~F~~~~~g 283 (549)
+.|+++++. .+++.+++|+|+.|.....+.++.++. ..+.+.+.+.. .+.+... .+....++|||.+|.+ .|
T Consensus 311 ~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~---~~~~~~~~SD~~~f~~--~G 384 (444)
T 3iib_A 311 KTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA---GNNKASGGPDVSMLPA--LG 384 (444)
T ss_dssp HHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE---CCSCCCCCGGGTTSGG--GT
T ss_pred HHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc---ccCCCCCCCccHHHHH--CC
Confidence 999998843 367899999998764433333443322 12233332221 1221111 1223456899999986 79
Q ss_pred CcEEEEEEecCC--CcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhcCcCc
Q 008900 284 IPGLDIIFLIGG--YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKL 333 (549)
Q Consensus 284 iPgld~a~~~~~--y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~~~~l 333 (549)
||++++...... .+|||+.||+|++|++.+++.++.+..++..++++++.
T Consensus 385 iP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 385 VPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp CCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999998765333 38999999999999999999999999999999997653
No 13
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.95 E-value=1.5e-27 Score=255.25 Aligned_cols=205 Identities=20% Similarity=0.234 Sum_probs=156.5
Q ss_pred ccceEEEEEeCCCC-CCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcch
Q 008900 127 NHTNIVMRISSTDS-QDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGA 205 (549)
Q Consensus 127 ~~~NVi~~i~G~~~-~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 205 (549)
...||+++++|+++ ..+++.|++++|+|||+.+|||.||++||+++||++|.|.+. +++|+|+|++|++||.|+.||
T Consensus 202 ~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs 279 (421)
T 2ek8_A 202 TSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGS 279 (421)
T ss_dssp EEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHH
T ss_pred cccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhH
Confidence 35799999999743 235789999999999999999999999999999999999874 678999999999999999999
Q ss_pred HHHHhhcC--ccCcccEEEEeccCCCCCC-ceEEecCCC-CchhhHhhhhccccccccccccccCCCCCCCchHHHhhcC
Q 008900 206 HGFMKAHK--WRDSVGAVINVEASGTGGL-DLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDY 281 (549)
Q Consensus 206 ~~f~~~~~--~~~~v~a~INLD~~G~gg~-~~lfq~~p~-~~~~~~y~~~~~~p~~~~~~~~~f~~ips~sD~~~F~~~~ 281 (549)
+.|+++++ +.+++.++||+|++|.++. .+....+.. +.....+.+....+.+.. .. ....++|||.+|.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~---~~~~~~SD~~~F~~-- 353 (421)
T 2ek8_A 280 KKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV-LP---YGQEGRSDHESFHA-- 353 (421)
T ss_dssp HHHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC-CC---EEECCSSTHHHHHT--
T ss_pred HHHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC-CC---CCCCCCCccHHHHH--
Confidence 99999874 3568999999999998776 333332221 111111111100011100 00 01235799999985
Q ss_pred CCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhcCcCcc-cchhh
Q 008900 282 GDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQ-NAHDR 339 (549)
Q Consensus 282 ~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~~~~l~-~~~~~ 339 (549)
.|||++.+......++|||++||++++|++.++++++.+..++..+++.+.++ ++.+|
T Consensus 354 ~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~~~~y 412 (421)
T 2ek8_A 354 LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIEPIDY 412 (421)
T ss_dssp TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCC
T ss_pred CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCChhhh
Confidence 89999987644444589999999999999999999999999999999988776 54444
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.87 E-value=3.6e-21 Score=201.57 Aligned_cols=198 Identities=15% Similarity=0.140 Sum_probs=145.3
Q ss_pred eeEEEEeeeecCcccceeccccccccccccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHH
Q 008900 99 FRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARL 178 (549)
Q Consensus 99 ~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~ 178 (549)
+++.+|.+...|... ..+++ ++|+ .++.|+++||+|+ | .+|+||+||+|+++|++|.
T Consensus 154 y~V~IdS~l~~G~l~--------------y~e~~--ipG~----t~~~IllsaH~cH-P--~~ANDNaSG~a~lleLar~ 210 (435)
T 3k9t_A 154 YEVVIDSSLEDGSLT--------------YGEYY--IRGE----LEEEILLTTYTCH-P--SMCNDNLSGVALITFIAKA 210 (435)
T ss_dssp EEEEEEEEEESCEEE--------------EEEEE--ECCS----SSCEEEEEEECCC-C--SCTTTTHHHHHHHHHHHHH
T ss_pred EEEEEeeeecCCceE--------------EEEEE--ecCC----CCCEEEEEEEcCC-C--CCCCccchHHHHHHHHHHH
Confidence 788888776656311 12222 5885 3578999999998 3 3699999999999999999
Q ss_pred HHhcCCCCCCCEEEEEeCcccCCCcchHHHHhhcCc-cCcccEEEEeccCCCCCCceEEecCCC-CchhhH-hhhhcccc
Q 008900 179 TIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSV-YAQSAIYP 255 (549)
Q Consensus 179 L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~-~~~v~a~INLD~~G~gg~~~lfq~~p~-~~~~~~-y~~~~~~p 255 (549)
|++. +++++++|+|++ |..||..|+++|+. .+++++.+|+||+|.++. ..+..++. ++..+. ..+...+.
T Consensus 211 l~~~--~~~~t~rFvf~p----g~iGS~~yl~~~~~~l~~i~a~lnLDmVGd~~~-~~y~~sr~g~~~~d~~~~~vl~~~ 283 (435)
T 3k9t_A 211 LSKL--KTKYSYRFLFAP----ETIGSITWLSRNEDKLKNIKMGLVATCVGDAGI-KNYKRTKFGDAEIDKIVEKVLMHC 283 (435)
T ss_dssp HTTS--CCSSEEEEEEEC----TTHHHHHHHHHCGGGGGGEEEEEECCSCCSSSC-EEEECCTTSSSHHHHHHHHHHHHS
T ss_pred HhcC--CCCceEEEEEcC----ccHHHHHHHHhChHhhhceEEEEEEEEecCCCC-ceeecCCCCChHHHHHHHHHHhhc
Confidence 9864 689999999998 68999999998852 468999999999998764 44444443 333221 11111110
Q ss_pred ccccccccccCCCCCCCchHHHhhcCCC--CcEEEEEEecCCC-cCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhcCc
Q 008900 256 MAHSAAQDVFPVIPGDTDYRIFSQDYGD--IPGLDIIFLIGGY-YYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSS 331 (549)
Q Consensus 256 ~~~~~~~~~f~~ips~sD~~~F~~~~~g--iPgld~a~~~~~y-~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~~~ 331 (549)
. ..-..+...|.+|||++|.. .| ||...+.....+| .|||+.||+|+|+++.|+...+.+...++.|.+..
T Consensus 284 -~--~~~~~~~f~~~GSDh~qF~s--pG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 284 -G--SEYYVADFFPWGSDERQFSS--PGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp -S--SCEEEECCCSCSSTHHHHTS--TTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred -C--CCCceecCCCCCCcchhHhh--CCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 0 00011223456899999985 68 9999987644433 89999999999999999999999999999997643
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.75 E-value=3e-17 Score=165.07 Aligned_cols=232 Identities=16% Similarity=0.140 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~ 133 (549)
+++.+.+++|. ++. ..|.+++++++||.++|+++| ++++... . ....|+++
T Consensus 6 ~~~~~~l~~lv-~ip---s~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~nv~a 56 (269)
T 4h2k_A 6 EKVVSLAQDLI-RRP---SISPNDEGCQQIIAERLEKLG------FQIEWMP--F-----------------NDTLNLWA 56 (269)
T ss_dssp HHHHHHHHHHH-TSC---CBTTCCTTHHHHHHHHHHTTT------CEEEECC--B-----------------TTBCEEEE
T ss_pred HHHHHHHHHHh-CCC---CCCCCcHHHHHHHHHHHHHcC------CeEEEEE--c-----------------CCceEEEE
Confidence 45677777777 443 345555678999999999998 5544321 1 12369999
Q ss_pred EEeCCCCCCCCCeEEEeeecCCCCCC---------------------CCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEE
Q 008900 134 RISSTDSQDTDPSVLMNGHFDGPLSS---------------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (549)
Q Consensus 134 ~i~G~~~~~~~~~Vll~aH~Dsv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 192 (549)
++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++++++|.|.+.+.+++++|+|
T Consensus 57 ~~-g~----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~ 131 (269)
T 4h2k_A 57 KH-GT----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIAL 131 (269)
T ss_dssp EE-CS----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEE
Confidence 98 53 24689999999999853 599999999999999999998877778899999
Q ss_pred EEeCcccCCCc-chHHHHhhcC-ccCcccEEEEeccCCCC--CCceE-EecCCC-----CchhhHhhhhccccccccccc
Q 008900 193 LFNGAEELFML-GAHGFMKAHK-WRDSVGAVINVEASGTG--GLDLV-CQSGPS-----SWPSSVYAQSAIYPMAHSAAQ 262 (549)
Q Consensus 193 lf~~~EE~gl~-GS~~f~~~~~-~~~~v~a~INLD~~G~g--g~~~l-fq~~p~-----~~~~~~y~~~~~~p~~~~~~~ 262 (549)
+|+.+||.|.. |++.+++... ...+..++|+.|..+.. +..+. -+.|.. ..+.+...+.+..-.+ +..
T Consensus 132 ~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~~~g--i~~ 209 (269)
T 4h2k_A 132 LITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEETIG--ITP 209 (269)
T ss_dssp EEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHHHHS--CCC
T ss_pred EEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHHHhC--CCC
Confidence 99999999985 9999887542 23567899999977532 11111 011111 1122221111100000 000
Q ss_pred cccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 008900 263 DVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (549)
Q Consensus 263 ~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (549)
.. ...+++||.+.+.+ .|+|.+.+.-.. + ++||+.+ +++.+.+++..+.+.++++.+.+
T Consensus 210 ~~-~~~gggtDa~~~~~--~g~p~~~~~~~~-~-~~Hs~~E---~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 210 KA-ETGGGTSDGRFIAL--MGAEVVEFGPLN-S-TIHKVNE---CVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp EE-ECC--CHHHHHHHT--TTCEEEECCSBC-T-TTTSTTC---EEEHHHHHHHHHHHHHHHHHHC-
T ss_pred EE-ecCCCCchHHHHHh--hCCCEEEEEeCC-C-CCcCCcc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 00 11245899998874 799998865333 3 4699985 67899999999999999988754
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.73 E-value=5e-17 Score=163.20 Aligned_cols=232 Identities=17% Similarity=0.117 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~ 133 (549)
+++.+.+++|. ++.+ .|..++++++||.++|+++| ++++... . ....|+++
T Consensus 6 ~~~~~~l~~lv-~ips---~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~nv~a 56 (268)
T 3t68_A 6 SPVLALAKELI-SRQS---VTPADAGCQDLMIERLKALG------FEIESMV--F-----------------EDTTNFWA 56 (268)
T ss_dssp CHHHHHHHHHH-TSCC---BTTCCTTHHHHHHHHHHHTT------CEECCCE--E-----------------TTEEC-CE
T ss_pred HHHHHHHHHHh-CCCC---CCCCchHHHHHHHHHHHHCC------CeEEEEe--c-----------------CCccEEEE
Confidence 46778888888 4443 44445578999999999998 4433221 1 12369999
Q ss_pred EEeCCCCCCCCCeEEEeeecCCCCCC---------------------CCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEE
Q 008900 134 RISSTDSQDTDPSVLMNGHFDGPLSS---------------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (549)
Q Consensus 134 ~i~G~~~~~~~~~Vll~aH~Dsv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 192 (549)
++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++|++++.|.+.+.+++++|+|
T Consensus 57 ~~-g~----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~ 131 (268)
T 3t68_A 57 RR-GT----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGF 131 (268)
T ss_dssp EE-CS----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEE
Confidence 98 54 24689999999999853 599999999999999999998877778899999
Q ss_pred EEeCcccCCC-cchHHHHhhcC-ccCcccEEEEeccCCCC--CCceE-EecC-C----CCchhhHhhhhccccccccccc
Q 008900 193 LFNGAEELFM-LGAHGFMKAHK-WRDSVGAVINVEASGTG--GLDLV-CQSG-P----SSWPSSVYAQSAIYPMAHSAAQ 262 (549)
Q Consensus 193 lf~~~EE~gl-~GS~~f~~~~~-~~~~v~a~INLD~~G~g--g~~~l-fq~~-p----~~~~~~~y~~~~~~p~~~~~~~ 262 (549)
+|+.+||.|. .|++.+++... ...+..++|+.|..+.. +..+. -+.| | ...+.+...+.+..-.+-. .
T Consensus 132 ~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~~~gi~--~ 209 (268)
T 3t68_A 132 LITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEEVNHQA--P 209 (268)
T ss_dssp EEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHHHHSSC--C
T ss_pred EEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHHHhCCC--c
Confidence 9999999998 49999887542 23567899999987532 11111 1111 1 1112222221111000000 0
Q ss_pred cccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 008900 263 DVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (549)
Q Consensus 263 ~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (549)
. .....++||+..|.+ .|+|++.+.-. ...+||+.+ +++...+++..+.+.++++.+.+
T Consensus 210 ~-~~~sgggtD~~~~~~--~g~p~~~~~~~--~~~~Hs~~E---~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 210 A-LLTTGGTSDGRFIAQ--MGAQVVELGPV--NATIHKVNE---CVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp E-EESSCCCHHHHHHHH--HTCEEEECCSB--CTTTTSTTC---EEEHHHHHHHHHHHHHHHHHHHC
T ss_pred E-EecCccccHHHHHHh--cCCCEEEEeeC--CCCCCCccc---cccHHHHHHHHHHHHHHHHHHhC
Confidence 0 011235899999985 68998876432 235699986 66788999999999999988753
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.67 E-value=9e-16 Score=147.40 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=112.6
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccc
Q 008900 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (549)
Q Consensus 50 ~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~ 129 (549)
.++.+++.+.+++|. +|.+. .++++++++++|+.++++++| ++++.+... .| ..
T Consensus 6 ~~~~~~~~~~l~~lv-~i~s~-s~~~~e~~~~~~l~~~l~~~g------~~~~~~~~~-~g-----------------~~ 59 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYL-RIRTV-QPKPDYGAAVAFFEETARQLG------LGCQKVEVA-PG-----------------YV 59 (198)
T ss_dssp -CCCCHHHHHHHHHH-TSCCB-TTSCCHHHHHHHHHHHHHHHT------CEEEEEEEE-TT-----------------EE
T ss_pred chhHHHHHHHHHHHh-cCCCC-CCCcCHHHHHHHHHHHHHHCC------CeEEEEEcC-CC-----------------Ce
Confidence 356678899999999 56543 344466789999999999998 555554321 11 25
Q ss_pred eEEEEEeCCCCCCCCCeEEEeeecCCCCC---------------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 008900 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPR 188 (549)
Q Consensus 130 NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 188 (549)
|++++++|+++ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.++++
T Consensus 60 ~~i~~~~g~~~--~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~ 137 (198)
T 1q7l_A 60 VTVLTWPGTNP--TLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPR 137 (198)
T ss_dssp EEEEEECCSST--TSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred EEEEEEccCCC--CCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999988642 2478999999999874 468899999999999999999998888899
Q ss_pred CEEEEEeCcccCC-CcchHHHHhhcCcc-CcccEEEE
Q 008900 189 PIIFLFNGAEELF-MLGAHGFMKAHKWR-DSVGAVIN 223 (549)
Q Consensus 189 ~I~flf~~~EE~g-l~GS~~f~~~~~~~-~~v~a~IN 223 (549)
+|+|+|+.+||.| +.|++.++++++.. .+..++++
T Consensus 138 ~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id 174 (198)
T 1q7l_A 138 TIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALD 174 (198)
T ss_dssp CEEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEE
T ss_pred CEEEEEEcccccCccccHHHHHHhHHhccCCcCEEEe
Confidence 9999999999997 79999998754321 23455554
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.58 E-value=2.6e-14 Score=150.18 Aligned_cols=226 Identities=16% Similarity=0.204 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEE
Q 008900 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (549)
Q Consensus 55 ra~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~ 134 (549)
++.+.+++|+ ++.+ +.| .++++++||.+++++++ .++++| +..|++++
T Consensus 8 ~~~~~l~~L~-~~~s-~sg--~e~~~~~~l~~~l~~~g------~~~~~d----------------------~~gnlia~ 55 (373)
T 1vhe_A 8 ETLTMLKDLT-DAKG-IPG--NEREVRQVMKSYIEPFA------DEVTTD----------------------RLGSLIAK 55 (373)
T ss_dssp HHHHHHHHHH-HSCC-CTT--CCHHHHHHHHHHHGGGC------SEEEEC----------------------TTCCEEEE
T ss_pred HHHHHHHHHH-cCCC-CCC--chHHHHHHHHHHHHhhC------CEEEEc----------------------CCCcEEEE
Confidence 5788899999 5543 333 34588999999999998 444443 12499999
Q ss_pred EeCCCCCCCCCeEEEeeecCCCC---------------------------------------------------------
Q 008900 135 ISSTDSQDTDPSVLMNGHFDGPL--------------------------------------------------------- 157 (549)
Q Consensus 135 i~G~~~~~~~~~Vll~aH~Dsv~--------------------------------------------------------- 157 (549)
++|++ ..+.|++.+|+|+++
T Consensus 56 ~~g~~---~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~ 132 (373)
T 1vhe_A 56 KTGAE---NGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARK 132 (373)
T ss_dssp EESST---TSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTT
T ss_pred ecCCC---CCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhcc
Confidence 98752 246899999999997
Q ss_pred ------------------------CCCC---------------------CCCCchHHHHHHHHHHHHHhcCCCCCCCEEE
Q 008900 158 ------------------------SSPG---------------------AGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (549)
Q Consensus 158 ------------------------~spG---------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 192 (549)
..+| +.||++|++++|+++|.+.+.+ ++++|+|
T Consensus 133 ~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~ 210 (373)
T 1vhe_A 133 KSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYG 210 (373)
T ss_dssp SCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEE
T ss_pred CCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEE
Confidence 1112 7999999999999999998763 6689999
Q ss_pred EEeCcccCCCcchHHHHhhcCccCcccEEEEeccCCCCC----------------CceEE-ecC--CCCchhhHhhhhcc
Q 008900 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG----------------LDLVC-QSG--PSSWPSSVYAQSAI 253 (549)
Q Consensus 193 lf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G~gg----------------~~~lf-q~~--p~~~~~~~y~~~~~ 253 (549)
+|+++||.|+.|++.+.... +..++|++|+.+.++ +.+.. ..+ +++.+.+...+.+.
T Consensus 211 ~~~~~EE~G~~G~~~~~~~~----~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~~a~ 286 (373)
T 1vhe_A 211 VGTVQEEVGLRGAKTAAHTI----QPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAE 286 (373)
T ss_dssp EEESCCTTTSHHHHHHHHHH----CCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHHHHH
T ss_pred EEECCcccChhhHHHHhccc----CCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999886422 346789999876432 11110 000 01111211111110
Q ss_pred ccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 008900 254 YPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (549)
Q Consensus 254 ~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (549)
. .+-....+. ..+.+||...|.....|+|.+++.-. . ..+||+. |+++.+.+++..+.+..+++.+..
T Consensus 287 ~-~gi~~~~~~--~~~ggtDa~~~~~~~~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 287 E-AGIPYQFDA--IAGGGTDSGAIHLTANGVPALSITIA-T-RYIHTHA---AMLHRDDYENAVKLITEVIKKLDR 354 (373)
T ss_dssp H-HTCCCEEEE--ETTCCCTHHHHTTSTTCCCEEEEEEE-E-BSTTSSC---EEEEHHHHHHHHHHHHHHHHHCCH
T ss_pred H-cCCCeEEec--CCCCCccHHHHHHhCCCCcEEEEccc-c-ccCCChh---heecHHHHHHHHHHHHHHHHHhcH
Confidence 0 000000001 12468999999321269999987543 2 2479985 577899999999999999988754
No 19
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.56 E-value=2.6e-14 Score=148.80 Aligned_cols=221 Identities=14% Similarity=0.131 Sum_probs=140.3
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceE
Q 008900 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (549)
Q Consensus 52 s~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NV 131 (549)
+.+++.+.+++|. ++.+ + |..++++++|+.++++++| ++++.+. ..|+
T Consensus 4 ~~~~~~~~l~~lv-~i~s-~--s~~e~~~~~~l~~~l~~~g------~~~~~d~----------------------~gnl 51 (349)
T 2gre_A 4 HTKETMELIKELV-SIPS-P--SGNTAKIINFIENYVSEWN------VETKRNN----------------------KGAL 51 (349)
T ss_dssp HHHHHHHHHHHHH-TSCC-B--TTCCHHHHHHHHHHTTTSS------SEEEECS----------------------SSCE
T ss_pred cHHHHHHHHHHHH-hCCC-C--CccHHHHHHHHHHHHHHhC------CEEEEec----------------------CCcE
Confidence 4578889999999 5654 2 3334578999999999998 4444431 2489
Q ss_pred EEEEeCCCCCCCCCeEEEeeecCCCC----------------C-------------------C-----------------
Q 008900 132 VMRISSTDSQDTDPSVLMNGHFDGPL----------------S-------------------S----------------- 159 (549)
Q Consensus 132 i~~i~G~~~~~~~~~Vll~aH~Dsv~----------------~-------------------s----------------- 159 (549)
+++++|++ +.+.|++.+|+|+++ . +
T Consensus 52 ~a~~~g~~---~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~ 128 (349)
T 2gre_A 52 ILTVKGKN---DAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVY 128 (349)
T ss_dssp EEEECCSE---EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-------
T ss_pred EEEecCCC---CCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCcccc
Confidence 99998752 236799999999983 0 0
Q ss_pred ------------------------------------------------CC-----CCCCchHHHHHHHHHHHHHhcCCCC
Q 008900 160 ------------------------------------------------PG-----AGDCGSCVASMLELARLTIDSGWIP 186 (549)
Q Consensus 160 ------------------------------------------------pG-----A~Dd~sgva~~LE~ar~L~~~~~~p 186 (549)
.| +.||++|++++|+++|.+.+.+.++
T Consensus 129 ~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~ 208 (349)
T 2gre_A 129 KDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTL 208 (349)
T ss_dssp ------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCC
T ss_pred chhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCC
Confidence 01 6999999999999999999887778
Q ss_pred CCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccCCCCC-C-------ceEEe--cCCC-CchhhHhhhhc---
Q 008900 187 PRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-L-------DLVCQ--SGPS-SWPSSVYAQSA--- 252 (549)
Q Consensus 187 ~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G~gg-~-------~~lfq--~~p~-~~~~~~y~~~~--- 252 (549)
+++|+|+|+++||.|+.|++.+ ..+...+|++|+.+.++ + .+... .++. +.+.+...+.+
T Consensus 209 ~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~a~~~ 282 (349)
T 2gre_A 209 PYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTN 282 (349)
T ss_dssp SEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHHHH
T ss_pred CceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHHHHHc
Confidence 8999999999999999999865 24578999999987653 2 11111 1111 22222222111
Q ss_pred cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHH
Q 008900 253 IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLK 325 (549)
Q Consensus 253 ~~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~ 325 (549)
..|+.. +.. ...+||+.+|.....|+|.+++. ... ..+|| .|+++...+....+.+.+++.
T Consensus 283 gi~~q~----~~~--~ggGsDa~~~~~~~~GiPt~~lg-~~~-~~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 283 HIEYKV----DIY--PYYGSDASAAIRAGFDVKHALIG-AGI-DSSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp TCCEEE----EEC--SCC--------CCSSSCEEEEEE-ECC-BSTTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred CCCcEE----ecc--CCCCccHHHHHHhCCCCcEEEec-cCc-ccccc----ceeccHHHHHHHHHHHHHHHh
Confidence 122211 111 24579998884223699999775 333 35787 567788889888888877775
No 20
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.56 E-value=2.9e-14 Score=147.25 Aligned_cols=147 Identities=16% Similarity=0.051 Sum_probs=97.7
Q ss_pred CCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccCCCC-----------
Q 008900 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTG----------- 230 (549)
Q Consensus 162 A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G~g----------- 230 (549)
+.||++|++++|+++|.+++.+ ++++|.|+|+++||.|+.|++.++.. .+..++|++|+.+.+
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~ 244 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGK 244 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTS
T ss_pred cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCC
Confidence 6899999999999999998764 66899999999999999999988642 245789999987643
Q ss_pred CCceEEe--cCC-CCchhhHhhhhccccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCC
Q 008900 231 GLDLVCQ--SGP-SSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDR 307 (549)
Q Consensus 231 g~~~lfq--~~p-~~~~~~~y~~~~~~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~ 307 (549)
|..+.+. ..+ ++.+.+...+.+.. .+..... ...+.+||...|.+ |+|.+++.-. ...+||+. |+
T Consensus 245 G~~i~~~d~~~~~~~~l~~~l~~~~~~-~gi~~~~---~~~~ggtDa~~~~~---GiPtv~lg~~--~~~~Hs~~---E~ 312 (332)
T 2wyr_A 245 GPVIRAVDNSAIYSRDLARKVWSIAEK-NGIEIQI---GVTGGGTDASAFQD---RSKTLALSVP--IKYLHSEV---ET 312 (332)
T ss_dssp CCEEEEECSSCBCCHHHHHHHHHHHHH-TTCCCEE---EECSSCCGGGGGTT---TSEEEEEECE--EBSCSSTT---CE
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHH-cCCCeEE---ecCCCCchHHHHHc---CCCEEEEcCC--cCCCCChh---hc
Confidence 1112110 111 11122222211110 0000000 11346899999963 9999987532 23589976 56
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 008900 308 LLPGSVQARGDNLFNVLKA 326 (549)
Q Consensus 308 id~~~lq~~g~~~l~l~~~ 326 (549)
++.+.+++..+.+..+++.
T Consensus 313 v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 313 LHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp EEHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHh
Confidence 7788999999988888765
No 21
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.55 E-value=4e-14 Score=147.59 Aligned_cols=219 Identities=14% Similarity=0.125 Sum_probs=147.9
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEEE
Q 008900 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (549)
Q Consensus 56 a~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i 135 (549)
..+.+++|+ ++.+ +.|.++ +++++||.+++++++ .+++.| +..|+++++
T Consensus 8 ~~~~l~~L~-~~~s-~sg~e~-~~~~~~l~~~l~~~g------~~~~~d----------------------~~gnlia~~ 56 (353)
T 1y0y_A 8 DYELLKKVV-EAPG-VSGYEF-LGIRDVVIEEIKDYV------DEVKVD----------------------KLGNVIAHK 56 (353)
T ss_dssp CHHHHHHHH-HSCC-BTTCGG-GTHHHHHHHHHGGGS------SEEEEC----------------------TTCCEEEEE
T ss_pred HHHHHHHHH-hCCC-CCccch-HHHHHHHHHHHHhhC------CeEEEc----------------------CCCCEEEEe
Confidence 457889998 4543 344332 578999999999998 444442 125999998
Q ss_pred eCCCCCCCCCeEEEeeecCCCC----------------------------------------------------------
Q 008900 136 SSTDSQDTDPSVLMNGHFDGPL---------------------------------------------------------- 157 (549)
Q Consensus 136 ~G~~~~~~~~~Vll~aH~Dsv~---------------------------------------------------------- 157 (549)
+|+ ++.|++++|+|+++
T Consensus 57 ~g~-----~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~ 131 (353)
T 1y0y_A 57 KGE-----GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRK 131 (353)
T ss_dssp CCS-----SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC------------
T ss_pred cCC-----CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhcc
Confidence 763 36799999999994
Q ss_pred ------------------------CCCC--------------------CCCCchHHHHHHHHHHHHHhcCCCCCCCEEEE
Q 008900 158 ------------------------SSPG--------------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFL 193 (549)
Q Consensus 158 ------------------------~spG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~fl 193 (549)
..+| +.||++|++++|++++.+++ ++++|+|+
T Consensus 132 ~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~ 207 (353)
T 1y0y_A 132 KAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFV 207 (353)
T ss_dssp -CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEE
T ss_pred CCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEE
Confidence 1244 69999999999999999864 67899999
Q ss_pred EeCcccCCCcchHHHHhhcCccCcccEEEEeccCCCCCC-c---------------eEE-ecC--CCCchhhHhhhhc--
Q 008900 194 FNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGL-D---------------LVC-QSG--PSSWPSSVYAQSA-- 252 (549)
Q Consensus 194 f~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G~gg~-~---------------~lf-q~~--p~~~~~~~y~~~~-- 252 (549)
|+++||.|+.|++.+... .+...+|++|+.+.++. . +.+ ..+ +++.+.+...+.+
T Consensus 208 ~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~ 283 (353)
T 1y0y_A 208 ATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKK 283 (353)
T ss_dssp EESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHHHH
T ss_pred EECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999988642 23568899998764321 1 100 000 0111122111111
Q ss_pred -cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 008900 253 -IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (549)
Q Consensus 253 -~~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (549)
..|... ....+.+||...|.....|+|.+++.-. . ..+||+. |+++.+.+.+..+.+..+++.++.
T Consensus 284 ~gi~~~~------~~~~~ggsDa~~~~~~~~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 284 HEIPYQL------EILLGGGTDAGAIHLTKAGVPTGALSVP-A-RYIHSNT---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp TTCCEEE------EECSSCCCTHHHHTTSTTCCCEEEEEEE-E-BSCSSSC---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred cCCCEEE------eecCCCCchHHHHHHhCCCCcEEEEccc-c-cccCCHH---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 111100 0113468999999321269999997643 2 3589976 567788999999999999988754
No 22
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.52 E-value=1.4e-13 Score=144.99 Aligned_cols=146 Identities=21% Similarity=0.307 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh-hHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceE
Q 008900 53 EARAIQHVRVLADEIGDRQEGRP-GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (549)
Q Consensus 53 ~era~~~l~~La~~ig~R~~gS~-~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NV 131 (549)
.+++.+.+++|. +|.+. .+.+ +.+++++||.++++++| ++++.+.....+ ...|+
T Consensus 18 ~~~~~~~l~~lv-~i~s~-s~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~~----------------~~~~v 73 (393)
T 1cg2_A 18 QPAVIKTLEKLV-NIETG-TGDAEGIAAAGNFLEAELKNLG------FTVTRSKSAGLV----------------VGDNI 73 (393)
T ss_dssp HHHHHHHHHHHH-TSCCB-TTCHHHHHHHHHHHHHHHHHTT------CEEEEEECSTTC----------------CSEEE
T ss_pred HHHHHHHHHHHh-cCCCC-CCCHHHHHHHHHHHHHHHHHcC------CeEEEEecCcCC----------------CCCeE
Confidence 467888888888 66653 3443 34589999999999999 555554321000 12599
Q ss_pred EEEEeCCCCCCCCCeEEEeeecCCCCC-----------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 008900 132 VMRISSTDSQDTDPSVLMNGHFDGPLS-----------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (549)
Q Consensus 132 i~~i~G~~~~~~~~~Vll~aH~Dsv~~-----------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf 194 (549)
+++++|++ .+.|++.+|+|+||. ++|+.|+++|++++|++++.|++.+.+++++|+|+|
T Consensus 74 ~a~~~g~~----~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~ 149 (393)
T 1cg2_A 74 VGKIKGRG----GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLF 149 (393)
T ss_dssp EEEEECSS----CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEEECCCC----CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 99998752 267999999999974 378999999999999999999998777778999999
Q ss_pred eCcccCCCcchHHHHhhcCccCcccEEEEeccCC
Q 008900 195 NGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (549)
Q Consensus 195 ~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G 228 (549)
+.+||.|..|++.++++.. .++.+++++|..+
T Consensus 150 ~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 150 NTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp ESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 9999999999999988543 3567889998654
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.50 E-value=2.2e-13 Score=144.34 Aligned_cols=129 Identities=20% Similarity=0.213 Sum_probs=108.3
Q ss_pred cHHHHHHHHHHHHHhcCC-------CCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceecccccccc
Q 008900 52 SEARAIQHVRVLADEIGD-------RQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (549)
Q Consensus 52 s~era~~~l~~La~~ig~-------R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~ 124 (549)
+.+|+++.+++|+ +|++ |...|.++.++++||.++++++| ++++.|.
T Consensus 3 ~~~~~~~~l~~l~-~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g------~~~~~d~------------------- 56 (408)
T 3n5f_A 3 QGERLWQRLMELG-EVGKQPSGGVTRLSFTAEERRAKDLVASYMREAG------LFVYEDA------------------- 56 (408)
T ss_dssp CHHHHHHHHHHHH-TTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHT------CEEEECT-------------------
T ss_pred CHHHHHHHHHHHH-ccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCC------CEEEEcC-------------------
Confidence 5789999999999 6776 44457788899999999999999 5444421
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC----
Q 008900 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL---- 200 (549)
Q Consensus 125 ~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~---- 200 (549)
..|++++++|+++ +.+.|++++|+|++|. .|..|+++|++++|++++.|.+.+.+++++|.|+|+.+||.
T Consensus 57 ---~gnv~a~~~g~~~--~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~ 130 (408)
T 3n5f_A 57 ---AGNLIGRKEGTNP--DATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFR 130 (408)
T ss_dssp ---TCCEEEEECCSST--TSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTT
T ss_pred ---CCCEEEEecCCCC--CCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccC
Confidence 2499999998642 3578999999999995 57889999999999999999998878999999999999995
Q ss_pred -CCcchHHHHhhc
Q 008900 201 -FMLGAHGFMKAH 212 (549)
Q Consensus 201 -gl~GS~~f~~~~ 212 (549)
|+.||+.++...
T Consensus 131 ~g~~Gs~~~~~~~ 143 (408)
T 3n5f_A 131 FGMIGSRAMAGTL 143 (408)
T ss_dssp CCCHHHHHHHTCC
T ss_pred CCCcCHHHHHcCC
Confidence 788999998643
No 24
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.47 E-value=9.8e-13 Score=142.02 Aligned_cols=152 Identities=17% Similarity=0.186 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh----hHHHHHHHHHHHHHcccccCCCceeEEEEeeee----cCcccceecccccccc
Q 008900 53 EARAIQHVRVLADEIGDRQEGRP----GLREAAVYIKTQLEGIKERAGPKFRIEIEENVV----NGSFNMIFLGHSISLG 124 (549)
Q Consensus 53 ~era~~~l~~La~~ig~R~~gS~----~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~----~g~~~~~~~~~~~~~~ 124 (549)
.++..+.+++|. ++.. ..+.+ ++.++++||.++++++| ++++.+.... .| . .
T Consensus 19 ~~~~~~~l~~l~-~~ps-~s~~e~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~~~~~~--------~----~ 78 (479)
T 2zog_A 19 QDRYVKKLAEWV-AIQS-VSAWPEKRGEIRRMMEVAAADVQRLG------GSVELVDIGKQKLPDG--------S----E 78 (479)
T ss_dssp HHHHHHHHHHHH-HSCC-BTTCGGGHHHHHHHHHHHHHHHHHTT------CEEEEECCCEEECTTS--------C----E
T ss_pred HHHHHHHHHHHh-cCCC-ccCCcccchHHHHHHHHHHHHHHHcC------CeEEEeeccccccCCC--------c----c
Confidence 467888899998 5554 23333 34589999999999999 5555543110 00 0 0
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeeecCCCCC---------------------CCCCCCCchHHHHHHHHHHHHHhcC
Q 008900 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSG 183 (549)
Q Consensus 125 ~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~ 183 (549)
.....||+++++|.. +.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+
T Consensus 79 ~~~~~~v~a~~~~~~---~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~ 155 (479)
T 2zog_A 79 IPLPPILLGKLGSDP---QKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTG 155 (479)
T ss_dssp EECCCEEEEEECCCT---TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEEecCCC---CCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhC
Confidence 001269999997632 3578999999999975 4588999999999999999999988
Q ss_pred CCCCCCEEEEEeCcccCCCcchHHHHhhcC--ccCcccEEEEeccC
Q 008900 184 WIPPRPIIFLFNGAEELFMLGAHGFMKAHK--WRDSVGAVINVEAS 227 (549)
Q Consensus 184 ~~p~~~I~flf~~~EE~gl~GS~~f~~~~~--~~~~v~a~INLD~~ 227 (549)
.+++++|+|+|+.+||.|..|++.++++++ +..++.+++++|..
T Consensus 156 ~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~ 201 (479)
T 2zog_A 156 QEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNY 201 (479)
T ss_dssp CCCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCB
T ss_pred CCCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCCC
Confidence 888899999999999999999999998763 23467889999864
No 25
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.46 E-value=4.7e-13 Score=144.90 Aligned_cols=145 Identities=17% Similarity=0.241 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEE
Q 008900 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (549)
Q Consensus 55 ra~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~ 134 (549)
++.+.+++|. ++.......++..++++||.++++++| ++++.+.. . ...||+++
T Consensus 45 ~~~~~l~~l~-~ips~s~~e~~~~~~~~~l~~~l~~~G------~~~~~~~~--~-----------------~~~~v~a~ 98 (481)
T 2pok_A 45 HYFEVLRTLI-SKKSVFAQQVGLKEVANYLGEIFKRVG------AEVEIDES--Y-----------------TAPFVMAH 98 (481)
T ss_dssp HHHHHHHHHH-HSCCCGGGCTTHHHHHHHHHHHHHHTT------CEEEEECS--S-----------------SSCEEEEE
T ss_pred HHHHHHHHHH-cCCCcCCCCHHHHHHHHHHHHHHHHcC------CEEEEecC--C-----------------CCcEEEEE
Confidence 6788888888 565432222345689999999999999 55555431 1 13699999
Q ss_pred EeCCCCCCCCCeEEEeeecCCCCC---------------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEE
Q 008900 135 ISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFL 193 (549)
Q Consensus 135 i~G~~~~~~~~~Vll~aH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~fl 193 (549)
++|.+ .+.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+.+++++|+|+
T Consensus 99 ~~g~~--~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~ 176 (481)
T 2pok_A 99 FKSSR--PDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFI 176 (481)
T ss_dssp ECCSS--TTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEE
T ss_pred ecCCC--CCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 98752 23578999999999874 46889999999999999999998755788999999
Q ss_pred EeCcccCCCcchHHHHhhcCc-cCcccEEEEeccC
Q 008900 194 FNGAEELFMLGAHGFMKAHKW-RDSVGAVINVEAS 227 (549)
Q Consensus 194 f~~~EE~gl~GS~~f~~~~~~-~~~v~a~INLD~~ 227 (549)
|+.+||.|..|++.+++++.. -+++.++++.|..
T Consensus 177 ~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~~ 211 (481)
T 2pok_A 177 MEGAEESASTDLDKYLEKHADKLRGADLLVWEQGT 211 (481)
T ss_dssp EESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCCB
T ss_pred EecccccCchhHHHHHHHhHhhccCCCEEEECCCC
Confidence 999999999999999876521 1226788888864
No 26
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.45 E-value=2.7e-13 Score=140.56 Aligned_cols=149 Identities=15% Similarity=0.126 Sum_probs=83.7
Q ss_pred CCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccCCCC---CCce----
Q 008900 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTG---GLDL---- 234 (549)
Q Consensus 162 A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G~g---g~~~---- 234 (549)
+.||++|++++|+++|.+. +++++|+|+++++||.|+.|++.+++.. +..++|++|+...+ |+.-
T Consensus 165 a~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~~----~~~~~i~~d~~~~~~~~G~~~h~~~ 236 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQL----KPTCAIVVETTTAGDNPELEERKWA 236 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHHH----CCSEEEEEEEEEECSCSTTCCSSSS
T ss_pred cCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhcc----CCCEEEEEecccCCCCCCCccccCC
Confidence 6899999999999999886 4778999999999999999999988732 34678999976532 2110
Q ss_pred -------EEe---cCC--CCchhhHhhhhc---cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCC
Q 008900 235 -------VCQ---SGP--SSWPSSVYAQSA---IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYH 299 (549)
Q Consensus 235 -------lfq---~~p--~~~~~~~y~~~~---~~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YH 299 (549)
+.. .+. ++.+.+...+.+ ..|+. .....+.+||...|.....|+|.+.+.-. .. .+|
T Consensus 237 ~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~~------~~~~~~ggtDa~~~~~~~~GiP~v~~g~~-~~-~~H 308 (340)
T 2fvg_A 237 THLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPFQ------MKRRTAGGTDAGRYARTAYGVPAGVISTP-AR-YIH 308 (340)
T ss_dssp CCTTSCCEECSCCSSSCCCHHHHHHHHHHHHHTTCCCE------ECCCC-------------CCSCEEEEEEE-EE-ESS
T ss_pred cccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeE------EEecCCCCccHHHHHhhCCCCcEEEeccc-cc-ccC
Confidence 000 000 000111111100 01110 00123468999998631269999977532 22 389
Q ss_pred CccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 008900 300 TSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (549)
Q Consensus 300 T~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (549)
|+.+ +++.+.+++..+.+..+++.+..
T Consensus 309 s~~E---~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 309 SPNS---IIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp TTCE---EEEHHHHHHHHHHHHHHHHHCHH
T ss_pred Chhh---cccHHHHHHHHHHHHHHHHhccc
Confidence 9875 67788999999999999988754
No 27
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.44 E-value=1.4e-12 Score=135.86 Aligned_cols=134 Identities=21% Similarity=0.247 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~ 133 (549)
++..+.+++|. ++.. .|.++.++++||.++++++| ++++.+ ..|+++
T Consensus 11 ~~~~~~~~~l~-~~ps---~s~~e~~~~~~l~~~l~~~g------~~~~~~-----------------------~~nv~a 57 (356)
T 3ct9_A 11 AEAVSLLKSLI-SIPS---ISREETQAADFLQNYIEAEG------MQTGRK-----------------------GNNVWC 57 (356)
T ss_dssp HHHHHHHHHHH-TSCC---BTTCCHHHHHHHHHHHHHTT------CCEEEE-----------------------TTEEEE
T ss_pred HHHHHHHHHHh-cCCC---CCCChHHHHHHHHHHHHHCC------CeEEEE-----------------------eeeEEE
Confidence 56777888887 4443 23344578899999999998 544443 149999
Q ss_pred EEeCCCCCCCCCeEEEeeecCCCCC-------------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 008900 134 RISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (549)
Q Consensus 134 ~i~G~~~~~~~~~Vll~aH~Dsv~~-------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf 194 (549)
+++|++ .+.+.|++.+|+|++|. ++|+.|+++|++++|++++.|++.+ ++++|+|+|
T Consensus 58 ~~~g~~--~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~ 133 (356)
T 3ct9_A 58 LSPMFD--LKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLA 133 (356)
T ss_dssp ECSSCC--TTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEE
T ss_pred EEecCC--CCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEE
Confidence 998732 13578999999999974 4578899999999999999999875 789999999
Q ss_pred eCcccC-CCcchHHHHhhcCccCcccEEEEeccC
Q 008900 195 NGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEAS 227 (549)
Q Consensus 195 ~~~EE~-gl~GS~~f~~~~~~~~~v~a~INLD~~ 227 (549)
+.+||. |+.|++.++++.+ ++.+.+++|..
T Consensus 134 ~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 134 SCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp ECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 999999 8999999988652 45678888865
No 28
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.41 E-value=2.7e-12 Score=136.74 Aligned_cols=157 Identities=14% Similarity=0.118 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccc-cccc-cccccceE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGH-SISL-GYRNHTNI 131 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~-~~~~-~~~~~~NV 131 (549)
+++.+.+++|. ++. ..|.++.++++||.++|+++| ++++....... ....+.+. +... ......|+
T Consensus 26 ~~~~~~l~~l~-~~p---s~s~~e~~~~~~l~~~l~~~G------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v 93 (433)
T 3pfo_A 26 NDQVAFLQRMV-QFR---SVRGEEAPQQEWLAQQFADRG------YKVDTFSLADV--DIASHPKAAPMDTIDPAGSMQV 93 (433)
T ss_dssp HHHHHHHHHHH-TSC---CBTTCCHHHHHHHHHHHHHTT------CEEEEEETGGG--TGGGSTTCCCCTTCCGGGCEEE
T ss_pred HHHHHHHHHHh-cCC---CCCCCHHHHHHHHHHHHHHCC------CceEEEecchh--hhhccccccccccccCCCCcEE
Confidence 45667777777 443 234455689999999999998 55544321100 00000000 0000 12345799
Q ss_pred EEEEeCCCCCCCCCeEEEeeecCCCCCC---------------------CCCCCCchHHHHHHHHHHHHHhcCCCCCCCE
Q 008900 132 VMRISSTDSQDTDPSVLMNGHFDGPLSS---------------------PGAGDCGSCVASMLELARLTIDSGWIPPRPI 190 (549)
Q Consensus 132 i~~i~G~~~~~~~~~Vll~aH~Dsv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 190 (549)
+++++|.. +.+.|++.+|+|++|.+ +|+.||++|++++|++++.|.+.+.+++++|
T Consensus 94 ia~~~g~~---~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 170 (433)
T 3pfo_A 94 VATADSDG---KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARV 170 (433)
T ss_dssp EEEECCCC---CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCE
T ss_pred EEEEecCC---CCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccE
Confidence 99998743 35789999999999853 4899999999999999999998877788999
Q ss_pred EEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccCC
Q 008900 191 IFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (549)
Q Consensus 191 ~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G 228 (549)
.|+|..+||.|..|++.++++. .++.++|+.|..+
T Consensus 171 ~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 171 HVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp EEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred EEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 9999999999989999988743 2567888888554
No 29
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.40 E-value=1e-12 Score=140.45 Aligned_cols=140 Identities=14% Similarity=0.220 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHhcCCCCC-------CChhHHHHHHHHHHHHHcccccCCCcee-EEEEeeeecCcccceeccccccccc
Q 008900 54 ARAIQHVRVLADEIGDRQE-------GRPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGY 125 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~-------gS~~~e~a~~yl~~~l~~ig~~~~~~~~-vev~~~~~~g~~~~~~~~~~~~~~~ 125 (549)
+++.+.+++|. +|.+... .++++.++++||.++++++| ++ ++++.
T Consensus 27 ~~~~~~l~~lv-~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G------~~~~~~d~-------------------- 79 (434)
T 3ife_A 27 EELIERFTRYV-KIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVG------LTEVTMDD-------------------- 79 (434)
T ss_dssp HHHHHHHHHHH-TSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHT------CEEEEECT--------------------
T ss_pred HHHHHHHHhhE-EeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcC------CceEEECC--------------------
Confidence 57788888888 6664322 13466799999999999999 53 44431
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCC---------------------------------------------
Q 008900 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSP--------------------------------------------- 160 (549)
Q Consensus 126 ~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~sp--------------------------------------------- 160 (549)
..||+++++|+++ ++.+.|++++|+|+||..+
T Consensus 80 --~~nv~a~~~g~~~-~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~ 156 (434)
T 3ife_A 80 --NGYVMATLPANTD-KDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIIT 156 (434)
T ss_dssp --TSCEEEEECCBSS-SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEE
T ss_pred --CcEEEEEeCCCCC-CCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEE
Confidence 2499999998642 2357899999999997411
Q ss_pred --C----CCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccC
Q 008900 161 --G----AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (549)
Q Consensus 161 --G----A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~ 227 (549)
| +.||++|++++|++++.|.+.+..++++|.|+|+.+||.| .|++.+..+. + ++.+++++|..
T Consensus 157 grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~-~--~~d~~~~~d~~ 225 (434)
T 3ife_A 157 TDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA-F--GASFAYMMDGG 225 (434)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH-H--CCSEEEECCCC
T ss_pred CCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh-c--CCCEEEEecCC
Confidence 2 4899999999999999999887788999999999999999 8988764321 2 47788888853
No 30
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.39 E-value=5.7e-12 Score=136.67 Aligned_cols=152 Identities=17% Similarity=0.151 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHhcCCC-CCCCh----hHHHHHHHHHHHHHcccccCCCceeEEEEeeee----cCcccceecccccccc
Q 008900 54 ARAIQHVRVLADEIGDR-QEGRP----GLREAAVYIKTQLEGIKERAGPKFRIEIEENVV----NGSFNMIFLGHSISLG 124 (549)
Q Consensus 54 era~~~l~~La~~ig~R-~~gS~----~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~----~g~~~~~~~~~~~~~~ 124 (549)
+++.+.+++|. ++.+- ..+.+ ++.++++||.++|+++| ++++.+.... +|. .
T Consensus 25 ~~~i~~l~~lv-~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~~~~~g~------------~ 85 (485)
T 3dlj_A 25 DEFVQTLKEWV-AIESDSVQPVPRFRQELFRMMAVAADTLQRLG------ARVASVDMGPQQLPDGQ------------S 85 (485)
T ss_dssp HHHHHHHHHHH-TSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTT------CEEEEECCCEEEC--CC------------E
T ss_pred HHHHHHHHHHh-cCCCccCCCCccccHHHHHHHHHHHHHHHHcC------CeEEEEecCcccccCCC------------c
Confidence 56677777887 45432 02222 24589999999999999 5554432110 110 0
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeeecCCCCC---------------------CCCCCCCchHHHHHHHHHHHHHhcC
Q 008900 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSG 183 (549)
Q Consensus 125 ~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~ 183 (549)
+....||++++.+.. +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+
T Consensus 86 ~~~~~~v~a~~~~~~---~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~ 162 (485)
T 3dlj_A 86 LPIPPVILAELGSDP---TKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE 162 (485)
T ss_dssp EECCCEEEEEECCCT---TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred cCCCcEEEEEECCCC---CCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhC
Confidence 001258999996532 3578999999999985 4789999999999999999999988
Q ss_pred CCCCCCEEEEEeCcccCCCcchHHHHhhcCc--cCcccEEEEeccC
Q 008900 184 WIPPRPIIFLFNGAEELFMLGAHGFMKAHKW--RDSVGAVINVEAS 227 (549)
Q Consensus 184 ~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~--~~~v~a~INLD~~ 227 (549)
.+++++|+|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 163 ~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 163 QDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp CCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred CCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 8889999999999999999999999987642 3478899999964
No 31
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.37 E-value=3e-12 Score=133.73 Aligned_cols=149 Identities=15% Similarity=0.246 Sum_probs=112.3
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccce
Q 008900 51 FSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (549)
Q Consensus 51 fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~N 130 (549)
.+.++..+.+++|. ++.. .|.++.++++||.++|+++| ++++.+.... .......|
T Consensus 3 ~~~~~~~~~l~~l~-~~ps---~s~~e~~~~~~l~~~l~~~G------~~v~~~~~~~--------------~~~~~~~n 58 (373)
T 3gb0_A 3 INQERLVNEFMELV-QVDS---ETKFEAEICKVLTKKFTDLG------VEVFEDDTMA--------------VTGHGAGN 58 (373)
T ss_dssp SCHHHHHHHHHHHH-TSCC---BTTCCHHHHHHHHHHHHHTT------CEEEECSCHH--------------HHCCSSCC
T ss_pred CCHHHHHHHHHHHh-cccC---CCccHHHHHHHHHHHHHHCC------CEEEEecccc--------------ccCCCcee
Confidence 57789999999999 5544 34556789999999999999 5554432100 00012369
Q ss_pred EEEEEeCCCCCCCCCeEEEeeecCCCCC--------------CCCC----CCCchHHHHHHHHHHHHHhcCCCCCCCEEE
Q 008900 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS--------------SPGA----GDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (549)
Q Consensus 131 Vi~~i~G~~~~~~~~~Vll~aH~Dsv~~--------------spGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 192 (549)
++++++|+++ +.+.|++.+|+|++|. ++|+ .||++|++++|++++.|.+.+. ++++|.|
T Consensus 59 v~a~~~g~~~--~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~ 135 (373)
T 3gb0_A 59 LICTLPATKD--GVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEF 135 (373)
T ss_dssp EEEEECCSST--TCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEE
T ss_pred EEEEecCCCC--CCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEE
Confidence 9999988632 3578999999999974 3466 5999999999999999998764 6799999
Q ss_pred EEeCcccCCCcchHHHHhhcCccCcccEEEEeccCCC
Q 008900 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGT 229 (549)
Q Consensus 193 lf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G~ 229 (549)
+|+.+||.|..|++.+..+. .+....+++|..+.
T Consensus 136 ~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~~ 169 (373)
T 3gb0_A 136 IITVGEESGLVGAKALDRER---ITAKYGYALDSDGK 169 (373)
T ss_dssp EEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECSC
T ss_pred EEEeccccCchhhhhhCHHh---cCCCEEEEEcCCCC
Confidence 99999999999999885432 24566777776543
No 32
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.34 E-value=5.2e-12 Score=136.68 Aligned_cols=128 Identities=14% Similarity=0.148 Sum_probs=105.1
Q ss_pred cCcHHHHHHHHHHH-HHhcCCC--------------CCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccc
Q 008900 50 RFSEARAIQHVRVL-ADEIGDR--------------QEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNM 114 (549)
Q Consensus 50 ~fs~era~~~l~~L-a~~ig~R--------------~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~ 114 (549)
+.+.+++.+.+++| + +|++. ...+.++.++++||.++++++| ++++++.
T Consensus 28 ~~~~~~~~~~l~~L~v-~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G------~~v~~d~--------- 91 (474)
T 2v8h_A 28 SIASGRLNQTILETGS-QFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLG------CKVKVDK--------- 91 (474)
T ss_dssp CCCTTHHHHHHHHHHH-HTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTT------CEEEEBT---------
T ss_pred cCCHHHHHHHHHHHhh-hcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcC------CEEEEec---------
Confidence 45678899999999 8 67543 2336677799999999999999 5544321
Q ss_pred eeccccccccccccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 008900 115 IFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (549)
Q Consensus 115 ~~~~~~~~~~~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf 194 (549)
..|++++++|++ +.+.|++.+|+|+||.+ |..|++.|++++|++++.|.+.+.+++++|+|+|
T Consensus 92 -------------~gnvia~~~g~~---~~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif 154 (474)
T 2v8h_A 92 -------------IGNMFAVYPGKN---GGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVV 154 (474)
T ss_dssp -------------TCCEEEEECCSS---CCSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEEEE
T ss_pred -------------CceEEEEECCCC---CCCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 249999998764 23479999999999953 6789999999999999999998888899999999
Q ss_pred eCcccC-----CCcchHHHHh
Q 008900 195 NGAEEL-----FMLGAHGFMK 210 (549)
Q Consensus 195 ~~~EE~-----gl~GS~~f~~ 210 (549)
+.+||. |+.||+.+..
T Consensus 155 ~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 155 WFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp CTTCSCSSSSCTTHHHHHHTT
T ss_pred ECCccCCCCCCCcccHHHHHh
Confidence 999998 7889999875
No 33
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.33 E-value=4.9e-12 Score=134.38 Aligned_cols=126 Identities=16% Similarity=0.136 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHhcCCCC-------CCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccc
Q 008900 53 EARAIQHVRVLADEIGDRQ-------EGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (549)
Q Consensus 53 ~era~~~l~~La~~ig~R~-------~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~ 125 (549)
.+++.+.+++|+ +|++.. ..+.++.++++||.++++++| ++++.+.
T Consensus 8 ~~~~~~~l~~lv-~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G------~~v~~~~-------------------- 60 (423)
T 1z2l_A 8 RQAIEETLPWLS-SFGADPAGGMTRLLYSPEWLETQQQFKKRMAASG------LETRFDE-------------------- 60 (423)
T ss_dssp HHHHHHHHHHHH-HTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTT------CEEEECT--------------------
T ss_pred HHHHHHHHHHHH-hcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcC------CEEEEec--------------------
Confidence 578899999999 676543 123556689999999999998 5444321
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeeecCCCCCCCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC-----
Q 008900 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL----- 200 (549)
Q Consensus 126 ~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~----- 200 (549)
..|++++++|+++ ..+.|++.+|+|+||. .|..|++.|++++|++++.|++.+.+++++|+|+|+.+||.
T Consensus 61 --~gnv~a~~~g~~~--~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~ 135 (423)
T 1z2l_A 61 --VGNLYGRLNGTEY--PQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPY 135 (423)
T ss_dssp --TSCEEEEECCSSE--EEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSC
T ss_pred --CCcEEEEEcCCCC--CCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCC
Confidence 2399999987531 2368999999999995 37889999999999999999988778899999999999997
Q ss_pred CCcchHHHHh
Q 008900 201 FMLGAHGFMK 210 (549)
Q Consensus 201 gl~GS~~f~~ 210 (549)
|+.||+.+..
T Consensus 136 g~~Gs~~~~~ 145 (423)
T 1z2l_A 136 VFWGSKNIFG 145 (423)
T ss_dssp SCHHHHHHTT
T ss_pred CcccHHHHHc
Confidence 5679998876
No 34
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.33 E-value=9.9e-12 Score=129.53 Aligned_cols=139 Identities=17% Similarity=0.117 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~ 133 (549)
+++.+.+++|. ++.. .|..+.++++||.++|+++|.+ .++++.. ..|+++
T Consensus 13 ~~~~~~~~~l~-~~ps---~s~~e~~~~~~l~~~l~~~G~~-----~~~~~~~---------------------~~~~~a 62 (369)
T 3tx8_A 13 GDPIVLTQRLV-DIPS---PSGQEKQIADEIEDALRNLNLP-----GVEVFRF---------------------NNNVLA 62 (369)
T ss_dssp SCHHHHHHHHH-SSCC---BTTCTHHHHHHHHHHHHTTTCT-----TCEEEEE---------------------TTEEEE
T ss_pred HHHHHHHHHHh-cCCC---CCccHHHHHHHHHHHHHhcCCC-----CcEEecc---------------------CCcEEE
Confidence 34678888888 4443 3445568999999999999732 1233321 148999
Q ss_pred EEeCCCCCCCCCeEEEeeecCCCCC--------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 008900 134 RISSTDSQDTDPSVLMNGHFDGPLS--------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (549)
Q Consensus 134 ~i~G~~~~~~~~~Vll~aH~Dsv~~--------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 199 (549)
+++|. +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++. .+++++|+|+|..+||
T Consensus 63 ~~~~~----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE 137 (369)
T 3tx8_A 63 RTNRG----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEE 137 (369)
T ss_dssp ECCCC----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCS
T ss_pred EecCC----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccc
Confidence 99875 2478999999999986 479999999999999999999864 4678999999999999
Q ss_pred CCC--cchHHHHhhcCccCcccEEEEeccC
Q 008900 200 LFM--LGAHGFMKAHKWRDSVGAVINVEAS 227 (549)
Q Consensus 200 ~gl--~GS~~f~~~~~~~~~v~a~INLD~~ 227 (549)
.|. .|++.++++++...+..+.|+.|..
T Consensus 138 ~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 138 VADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp SCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred cCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 987 7999999876422356788888865
No 35
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.33 E-value=4e-12 Score=132.75 Aligned_cols=139 Identities=18% Similarity=0.151 Sum_probs=104.8
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhH-HHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccce
Q 008900 52 SEARAIQHVRVLADEIGDRQEGRPGL-REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (549)
Q Consensus 52 s~era~~~l~~La~~ig~R~~gS~~~-e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~N 130 (549)
+.+++.+.+++|. ++..- ...+++ .++++||.++++++| ++++.+. .|
T Consensus 4 ~~~~~~~~l~~l~-~ips~-s~~~~~e~~~~~~l~~~l~~~G------~~~~~~~-----------------------~~ 52 (364)
T 2rb7_A 4 SMQHIVELTSDLI-RFPSM-HSRPEQISRCAGFIMDWCAQNG------IHAERMD-----------------------HD 52 (364)
T ss_dssp HHHHHHHHHHHHH-TSCCC-TTCHHHHHHHHHHHHHHHHHTT------CCCEEEE-----------------------ET
T ss_pred cHHHHHHHHHHHH-cCCCC-CCCcchHHHHHHHHHHHHHHcC------CeEEEec-----------------------CC
Confidence 3567888899998 55442 222344 489999999999998 4333321 36
Q ss_pred EEEEEeCCCCCCCCCeEEEeeecCCCCC---------------CCCCCCCchHHHHHHHHHHHHHhcCCCC---CCC--E
Q 008900 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS---------------SPGAGDCGSCVASMLELARLTIDSGWIP---PRP--I 190 (549)
Q Consensus 131 Vi~~i~G~~~~~~~~~Vll~aH~Dsv~~---------------spGA~Dd~sgva~~LE~ar~L~~~~~~p---~~~--I 190 (549)
++++++|+.+ .+.+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.++ +++ |
T Consensus 53 ~~~~~~~~~~-~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v 131 (364)
T 2rb7_A 53 GIPSVMVLPE-KGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMAL 131 (364)
T ss_dssp TEEEEEECSB-TTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCE
T ss_pred CceEEEEEcC-CCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccE
Confidence 7788875311 13468999999999974 4678999999999999999998765455 457 9
Q ss_pred EEEEeCcccC-CCcchHHHHhhcCccCcccEEEEecc
Q 008900 191 IFLFNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEA 226 (549)
Q Consensus 191 ~flf~~~EE~-gl~GS~~f~~~~~~~~~v~a~INLD~ 226 (549)
+|+|+.+||. |+.|++.++++. +..+.+++|.
T Consensus 132 ~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 132 GLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp EEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred EEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 9999999996 678999998754 5678888774
No 36
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.30 E-value=1.6e-11 Score=129.35 Aligned_cols=141 Identities=21% Similarity=0.224 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEE
Q 008900 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (549)
Q Consensus 53 ~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi 132 (549)
+++..+.+++|. ++.. .|.+++++++||.++++++| ++++... . ....|++
T Consensus 5 ~~~~~~~l~~lv-~~ps---~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~nv~ 55 (393)
T 1vgy_A 5 ETQSLELAKELI-SRPS---VTPDDRDCQKLMAERLHKIG------FAAEEMH--F-----------------GNTKNIW 55 (393)
T ss_dssp CSHHHHHHHHHH-TSCC---BTTCCTTHHHHHHHHHHTTT------CEEEECC--B-----------------TTBCEEE
T ss_pred hHHHHHHHHHHh-cCCC---CCCCcHHHHHHHHHHHHHcC------CcEEEEe--c-----------------CCCcEEE
Confidence 356788888888 4432 34444578899999999998 5443321 1 1236999
Q ss_pred EEEeCCCCCCCCCeEEEeeecCCCCC---------------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEE
Q 008900 133 MRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (549)
Q Consensus 133 ~~i~G~~~~~~~~~Vll~aH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 191 (549)
+++ |+ +.+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.+++++|+
T Consensus 56 a~~-g~----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~ 130 (393)
T 1vgy_A 56 LRR-GT----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIA 130 (393)
T ss_dssp EEE-CS----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEE
T ss_pred EEE-CC----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 998 64 2468999999999985 357889999999999999999887777899999
Q ss_pred EEEeCcccCC-CcchHHHHhhcCc-cCcccEEEEeccC
Q 008900 192 FLFNGAEELF-MLGAHGFMKAHKW-RDSVGAVINVEAS 227 (549)
Q Consensus 192 flf~~~EE~g-l~GS~~f~~~~~~-~~~v~a~INLD~~ 227 (549)
|+|+.+||.+ +.|++.+++.... ..++.+++..|..
T Consensus 131 ~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 131 LLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp EEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred EEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 9999999974 7899988764321 2345667766654
No 37
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.30 E-value=1.1e-11 Score=130.62 Aligned_cols=155 Identities=19% Similarity=0.221 Sum_probs=111.7
Q ss_pred CCcCcCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccc
Q 008900 46 APLDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (549)
Q Consensus 46 ~~~~~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~ 125 (549)
...-+...++..+.+++|. ++.. .|.++.++++||.++|+++| ++++.+.... ...
T Consensus 16 ~~~~~~~~~~~~~~l~~L~-~ips---~s~~E~~~~~~l~~~l~~~G------~~v~~~~~~~--------------~~~ 71 (396)
T 3rza_A 16 YFQGMINEQRLLNTFLELV-QIDS---ETGNESTIQPILKEKFIALG------LDVKEDEAAK--------------HPK 71 (396)
T ss_dssp ---CCSCHHHHHHHHHHHH-TSCC---BTTCTTTHHHHHHHHHHHTT------CEEEECSGGG--------------STT
T ss_pred eEEEeecHHHHHHHHHHHe-ecCC---CCcCHHHHHHHHHHHHHHCC------CEEEEecccc--------------ccC
Confidence 3345567899999999999 5553 34455689999999999999 5555432100 000
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeeecCCCCC---------------CCCC----CCCchHHHHHHHHHHHHHhcCCCC
Q 008900 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------SPGA----GDCGSCVASMLELARLTIDSGWIP 186 (549)
Q Consensus 126 ~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~---------------spGA----~Dd~sgva~~LE~ar~L~~~~~~p 186 (549)
....|++++++|+.+..+.+.|++.+|+|++|. +.|+ .||++|++++|++++.|.+.+. +
T Consensus 72 ~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~ 150 (396)
T 3rza_A 72 LGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-P 150 (396)
T ss_dssp CSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-C
T ss_pred CCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-C
Confidence 124699999988511123578999999999973 3466 4999999999999999988764 6
Q ss_pred CCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccCC
Q 008900 187 PRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (549)
Q Consensus 187 ~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G 228 (549)
+++|.|+|..+||.|..|++.+..+. -+....+.+|..+
T Consensus 151 ~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 189 (396)
T 3rza_A 151 HGQIQFVITVGEESGLIGAKELNSEL---LDADFGYAIDASA 189 (396)
T ss_dssp CCCEEEEEESCGGGTSHHHHHCCGGG---CCCSEEEEEEESS
T ss_pred CCCEEEEEEcccccccHhHhhhchhh---cccceEEEEecCC
Confidence 78999999999999999999876532 2345667777654
No 38
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.27 E-value=4.3e-11 Score=130.21 Aligned_cols=136 Identities=17% Similarity=0.112 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCC---------ChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccc
Q 008900 53 EARAIQHVRVLADEIGDRQEG---------RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISL 123 (549)
Q Consensus 53 ~era~~~l~~La~~ig~R~~g---------S~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~ 123 (549)
.+++.+.+++|. +|.+-... .++..++.+|+.++++++| ++++..
T Consensus 33 ~~~~~~~l~~lv-~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G------~~~~~~------------------- 86 (492)
T 3khx_A 33 EDQIINDLKGLL-AIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDG------FTTHDV------------------- 86 (492)
T ss_dssp HHHHHHHHHHHH-TSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEEE-------------------
T ss_pred HHHHHHHHHHHh-cCCCCCCCcccccccccchHHHHHHHHHHHHHHHcC------CcceEe-------------------
Confidence 456778888887 55542211 1234589999999999999 544321
Q ss_pred cccccceEEEEEe-CCCCCCCCCeEEEeeecCCCCC-------------------CCCCCCCchHHHHHHHHHHHHHhcC
Q 008900 124 GYRNHTNIVMRIS-STDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSG 183 (549)
Q Consensus 124 ~~~~~~NVi~~i~-G~~~~~~~~~Vll~aH~Dsv~~-------------------spGA~Dd~sgva~~LE~ar~L~~~~ 183 (549)
.|+++.++ |+ .++.|++.+|+|+||. ++|+.||++|++++|++++.|++.+
T Consensus 87 -----~~~~~~~~~g~----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~ 157 (492)
T 3khx_A 87 -----DHIAGRIEAGK----GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMN 157 (492)
T ss_dssp -----TTTEEEEEEEC----SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred -----CCEEEEEEeCC----CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcC
Confidence 14445554 33 2478999999999985 3589999999999999999999988
Q ss_pred CCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEecc
Q 008900 184 WIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (549)
Q Consensus 184 ~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~ 226 (549)
.+++++|+|+|..+||.|..|++.++++++. ....+..|.
T Consensus 158 ~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~---~~~~~~~d~ 197 (492)
T 3khx_A 158 VDWKKRIHMIIGTDEESDWKCTDRYFKTEEM---PTLGFAPDA 197 (492)
T ss_dssp CCCSSEEEEEEECCTTCCCCTTSHHHHHSCC---CSEEECSSC
T ss_pred CCCCCCEEEEEECCccCCCcCHHHHHHhCcC---CCEEEecCC
Confidence 8889999999999999999999999997752 445555553
No 39
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.26 E-value=1.9e-11 Score=129.62 Aligned_cols=138 Identities=18% Similarity=0.246 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHhcCCCC-------CCChhHHHHHHHHHHHHHcccccCCCcee-EEEEeeeecCcccceecccccccccc
Q 008900 55 RAIQHVRVLADEIGDRQ-------EGRPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGYR 126 (549)
Q Consensus 55 ra~~~l~~La~~ig~R~-------~gS~~~e~a~~yl~~~l~~ig~~~~~~~~-vev~~~~~~g~~~~~~~~~~~~~~~~ 126 (549)
++.+.+++|. +|.+.. ..+++++++++||.++++++| ++ ++++.
T Consensus 3 ~~~~~l~~Lv-~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G------~~~~~~~~--------------------- 54 (417)
T 1fno_A 3 KLLERFLHYV-SLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMG------LVNITLSE--------------------- 54 (417)
T ss_dssp SHHHHHHHHH-TSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHT------CEEEEECT---------------------
T ss_pred HHHHHHHHhE-EecCCCCcccCCCCCCccHHHHHHHHHHHHHHcC------CCeEEECC---------------------
Confidence 4678888998 565422 123466689999999999998 44 33321
Q ss_pred ccceEEEEEeCCCCCCCCCeEEEeeecCCCCCC------C----------------------------------------
Q 008900 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS------P---------------------------------------- 160 (549)
Q Consensus 127 ~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~s------p---------------------------------------- 160 (549)
..||+++++|+++ .+.+.|++.+|+|+||.. |
T Consensus 55 -~~nvia~~~g~~~-~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~gr 132 (417)
T 1fno_A 55 -KGTLMATLPANVE-GDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTD 132 (417)
T ss_dssp -TCCEEEEECCSSC-SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECC
T ss_pred -CceEEEEECCCCC-CCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcC
Confidence 2499999987531 124679999999999742 1
Q ss_pred CC----CCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccC
Q 008900 161 GA----GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (549)
Q Consensus 161 GA----~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~ 227 (549)
|+ .||++|++++|++++.|++.+ .++++|+|+|+.+||.| .|++.+.++. + +..+.+++|..
T Consensus 133 Gat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 133 GKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred CccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 22 888999999999999999887 78899999999999998 8997766422 2 35678888865
No 40
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.25 E-value=5.2e-11 Score=123.85 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~ 133 (549)
++..+.+++|. ++. .-|..++++++||.++|+++| ++++... . ....|+++
T Consensus 3 ~~~~~~~~~L~-~~p---s~s~~e~~~~~~l~~~l~~~g------~~~~~~~--~-----------------~~~~n~~a 53 (377)
T 3isz_A 3 EKVVSLAQDLI-RRP---SISPNDEGCQQIIAERLEKLG------FQIEWMP--F-----------------NDTLNLWA 53 (377)
T ss_dssp HHHHHHHHHHH-TSC---CBTTCCTTHHHHHHHHHHHTT------CEEEECC--B-----------------TTBCEEEE
T ss_pred hHHHHHHHHHh-cCC---CCCCChhhHHHHHHHHHHHCC------CceEEee--c-----------------CCCceEEE
Confidence 56778888888 433 234445578999999999998 4443321 1 12469999
Q ss_pred EEeCCCCCCCCCeEEEeeecCCCCC---------------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEE
Q 008900 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (549)
Q Consensus 134 ~i~G~~~~~~~~~Vll~aH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 192 (549)
++ |+ +.+.|++.+|+|+||. ++|+.|+++|++++|++++.+.+.+.+++++|+|
T Consensus 54 ~~-g~----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~ 128 (377)
T 3isz_A 54 KH-GT----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIAL 128 (377)
T ss_dssp EE-ES----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 88 53 2478999999999985 2477799999999999999998877778899999
Q ss_pred EEeCcccCCC-cchHHHHhhcCc-cCcccEEEEeccC
Q 008900 193 LFNGAEELFM-LGAHGFMKAHKW-RDSVGAVINVEAS 227 (549)
Q Consensus 193 lf~~~EE~gl-~GS~~f~~~~~~-~~~v~a~INLD~~ 227 (549)
+|..+||.+. .|++.+++.... ..++.+++..|..
T Consensus 129 ~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~~ 165 (377)
T 3isz_A 129 LITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPS 165 (377)
T ss_dssp EEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCCC
T ss_pred EEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCCC
Confidence 9999999876 699988764321 1346667766643
No 41
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.23 E-value=5.8e-11 Score=128.35 Aligned_cols=147 Identities=18% Similarity=0.236 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHhcCCCCCC-C-----hh-HHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceecccccccccc
Q 008900 54 ARAIQHVRVLADEIGDRQEG-R-----PG-LREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYR 126 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~g-S-----~~-~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~ 126 (549)
+++.+.+++|. +|.+-... . .+ ++++.+|+.++|+++|.+. .++++.+ ..|
T Consensus 18 ~~~~~~l~~lv-~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~---~~~~~~~--~~~---------------- 75 (472)
T 3pfe_A 18 EEILPSLCDYI-KIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKG---MTLEIVR--LKN---------------- 75 (472)
T ss_dssp HTHHHHHHHHH-TCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTT---CEEEEEC--CTT----------------
T ss_pred HHHHHHHHHHh-CCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCC---cceEEEe--cCC----------------
Confidence 34667778887 45432110 0 12 4589999999999998321 2233322 111
Q ss_pred ccceEEEEEeCCCCCCCCCeEEEeeecCCCCC---------------------CCCCCCCchHHHHHHHHHHHHHhcCCC
Q 008900 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWI 185 (549)
Q Consensus 127 ~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~ 185 (549)
...||+++++|+ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+.+
T Consensus 76 ~~~~v~a~~~g~----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~ 151 (472)
T 3pfe_A 76 RTPLLFMEIPGQ----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLP 151 (472)
T ss_dssp SCCEEEEEECCS----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEEEcCC----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCC
Confidence 135999999873 2478999999998873 358999999999999999999988776
Q ss_pred CCCCEEEEEeCcccCCCcchHHHHhhcC-ccCcccEEEEeccC
Q 008900 186 PPRPIIFLFNGAEELFMLGAHGFMKAHK-WRDSVGAVINVEAS 227 (549)
Q Consensus 186 p~~~I~flf~~~EE~gl~GS~~f~~~~~-~~~~v~a~INLD~~ 227 (549)
++ +|+|+|..+||.|..|++.++++++ .-+++.+++.+|..
T Consensus 152 ~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~ 193 (472)
T 3pfe_A 152 YP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSG 193 (472)
T ss_dssp CE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCB
T ss_pred CC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCCC
Confidence 66 9999999999999999999998763 12367899999954
No 42
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.23 E-value=1.4e-10 Score=124.81 Aligned_cols=126 Identities=17% Similarity=0.184 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC----------hhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceecccccc
Q 008900 53 EARAIQHVRVLADEIGDRQEGR----------PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSIS 122 (549)
Q Consensus 53 ~era~~~l~~La~~ig~R~~gS----------~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~ 122 (549)
.+++.+.+++|. +|.. ..+. ++..++.+||.++++++| ++++. . +
T Consensus 13 ~~~~~~~l~~l~-~ips-~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G------~~~~~----~-~------------ 67 (470)
T 1lfw_A 13 KDAILKDLEELI-AIDS-SEDLENATEEYPVGKGPVDAMTKFLSFAKRDG------FDTEN----F-A------------ 67 (470)
T ss_dssp HHHHHHHHHHHH-TSCC-BCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEE----E-T------------
T ss_pred HHHHHHHHHHHc-CCCC-cCCCccccccCCCcHHHHHHHHHHHHHHHHcC------CeEEE----e-c------------
Confidence 467888899998 5543 2222 244689999999999999 54432 1 1
Q ss_pred ccccccceEEEEEeCCCCCCCCCeEEEeeecCCCCC--------------------CCCCCCCchHHHHHHHHHHHHHhc
Q 008900 123 LGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDS 182 (549)
Q Consensus 123 ~~~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~--------------------spGA~Dd~sgva~~LE~ar~L~~~ 182 (549)
..++++++ |++ .+.|++.+|+|+||. ++|+.||++|++++|++++.|++.
T Consensus 68 -----~~~~~~~~-g~~----~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~ 137 (470)
T 1lfw_A 68 -----NYAGRVNF-GAG----DKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEA 137 (470)
T ss_dssp -----TTEEEEEE-CCC----SSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHH
T ss_pred -----CeEEEEEe-CCC----CCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHc
Confidence 13667776 532 468999999999874 357799999999999999999988
Q ss_pred CCCCCCCEEEEEeCcccCCCcchHHHHhhcC
Q 008900 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHK 213 (549)
Q Consensus 183 ~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~ 213 (549)
+.+++++|+|+|+.+||.|..|++.+++++.
T Consensus 138 ~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 138 GFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp TCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred CCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 8888999999999999999999999998654
No 43
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.22 E-value=2.6e-11 Score=131.82 Aligned_cols=141 Identities=23% Similarity=0.248 Sum_probs=108.6
Q ss_pred cCcCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccc
Q 008900 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (549)
Q Consensus 48 ~~~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~ 127 (549)
..+++.++..+.+++|. ++ |++ |..++++.+||.++++++| ++++.+.
T Consensus 8 ~~~~~~~~~~~~~~~L~-~i-ps~--s~~e~~~~~~l~~~l~~~G------~~v~~~~---------------------- 55 (490)
T 3mru_A 8 ISTLSPAPLWQFFDKIC-SI-PHP--SKHEEALAQYIVTWATEQG------FDVRRDP---------------------- 55 (490)
T ss_dssp GGGSSSHHHHHHHHHHH-HS-CCB--TTCCTTHHHHHHHHHHHTT------CEEEECT----------------------
T ss_pred HhccCHHHHHHHHHHHh-CC-CCC--CCCHHHHHHHHHHHHHHcC------CEEEEcC----------------------
Confidence 45678899999999999 55 333 3445689999999999999 5544321
Q ss_pred cceEEEEEeCCCCCCCCCeEEEeeecCCCCCC------------------------CCCC---CCchHHHHHHHHHHHHH
Q 008900 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------------PGAG---DCGSCVASMLELARLTI 180 (549)
Q Consensus 128 ~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~s------------------------pGA~---Dd~sgva~~LE~ar~L~ 180 (549)
..|++++++|+.+.++.+.|++.+|+|+||.. +|+. ||++|+|++|++++
T Consensus 56 ~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~--- 132 (490)
T 3mru_A 56 TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA--- 132 (490)
T ss_dssp TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH---
T ss_pred CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH---
Confidence 24999999875322346789999999999853 3775 99999999999763
Q ss_pred hcCCCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccC
Q 008900 181 DSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (549)
Q Consensus 181 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~ 227 (549)
....++.+|.|+|..+||.|+.|++.++++. -+.+..+|+|+.
T Consensus 133 -~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 -SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp -CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred -hCCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 2345678999999999999999999887632 246788999965
No 44
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.20 E-value=7.7e-11 Score=123.08 Aligned_cols=131 Identities=21% Similarity=0.285 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHhcCCCCC-C-ChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccce
Q 008900 53 EARAIQHVRVLADEIGDRQE-G-RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (549)
Q Consensus 53 ~era~~~l~~La~~ig~R~~-g-S~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~N 130 (549)
.+++.+.+++|. ++..... + ++++.++++||.++++ | ++++.+... ....|
T Consensus 8 ~~~~~~~l~~l~-~ips~s~~~~~~~e~~~~~~l~~~l~--G------~~~~~~~~~------------------~~~~~ 60 (369)
T 2f7v_A 8 LASTLEHLETLV-SFDTRNPPRAIAAEGGIFDYLRAQLP--G------FQVEVIDHG------------------DGAVS 60 (369)
T ss_dssp HHHHHHHHHHHH-HSCCBTTTTCCCSSSHHHHHHHTTCT--T------CEEEEEECS------------------TTCEE
T ss_pred hHHHHHHHHHHh-CCCCcCCCCCCccHHHHHHHHHHHhC--C------CceEEEEcC------------------CCceE
Confidence 467888999998 5654321 1 1245589999999998 6 555554321 11369
Q ss_pred EEEEEeCCCCCCCCCeEEEeeecCCCCC-------------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEE
Q 008900 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (549)
Q Consensus 131 Vi~~i~G~~~~~~~~~Vll~aH~Dsv~~-------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 191 (549)
+++ ++|+ +.|++.+|+|+||. ++|+.||+.|++++|++++. ++++|+
T Consensus 61 ~~a-~~g~------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~ 126 (369)
T 2f7v_A 61 LYA-VRGT------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAA 126 (369)
T ss_dssp EEE-EESC------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEE
T ss_pred EEE-EcCC------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEE
Confidence 999 8864 45999999999974 35899999999999999876 678999
Q ss_pred EEEeCcccC-CCcchHHHHhhcCccCcccEEEEeccC
Q 008900 192 FLFNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEAS 227 (549)
Q Consensus 192 flf~~~EE~-gl~GS~~f~~~~~~~~~v~a~INLD~~ 227 (549)
|+|+.+||. |+.|++.++++.. +..+++++|..
T Consensus 127 ~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 127 FLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp EEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred EEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999 8999999998654 56778888864
No 45
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.18 E-value=4.3e-10 Score=116.38 Aligned_cols=218 Identities=14% Similarity=0.100 Sum_probs=141.1
Q ss_pred HHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEEEeC
Q 008900 58 QHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISS 137 (549)
Q Consensus 58 ~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i~G 137 (549)
+.+++|+ ++.+ +.| .++++++|+.++++++| .++++| +..|++++++|
T Consensus 7 ~~l~~Lv-~~~s-~sg--~e~~~~~~l~~~l~~~g------~~v~~d----------------------~~gnlia~~~g 54 (348)
T 1ylo_A 7 SLLKALS-EADA-IAS--SEQEVRQILLEEAARLQ------KEVRFD----------------------GLGSVLIRLNE 54 (348)
T ss_dssp HHHHHHH-HSCC-BTT--BCHHHHHHHHHHHHHTT------CCEEEC----------------------TTCCEEEECCC
T ss_pred HHHHHHH-cCCC-CCC--chHHHHHHHHHHHHhhC------CEEEEe----------------------cCCCEEEEecC
Confidence 6788998 5544 333 34578999999999998 444432 12499999877
Q ss_pred CCCCCCCCeEEEeeecCCCCC-----------------------------------------------------------
Q 008900 138 TDSQDTDPSVLMNGHFDGPLS----------------------------------------------------------- 158 (549)
Q Consensus 138 ~~~~~~~~~Vll~aH~Dsv~~----------------------------------------------------------- 158 (549)
++ .+.|++++|+|+|+.
T Consensus 55 ~~----~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~ 130 (348)
T 1ylo_A 55 ST----GPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDI 130 (348)
T ss_dssp CS----SCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEEC
T ss_pred CC----CceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEe
Confidence 52 367999999999840
Q ss_pred -------------CCC--------------------CCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcch
Q 008900 159 -------------SPG--------------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGA 205 (549)
Q Consensus 159 -------------spG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 205 (549)
..| +.||+.|+++++++++.+.+.+ ++.++.++++.+||.|+.|+
T Consensus 131 G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga 208 (348)
T 1ylo_A 131 GARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGG 208 (348)
T ss_dssp SCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHH
T ss_pred cCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHH
Confidence 011 4799999999999999997643 66899999999999999998
Q ss_pred HHHHhhcCccCcccEEEEeccCCCCCCce---------------EEecCCC---CchhhHhhhh---ccccccccccccc
Q 008900 206 HGFMKAHKWRDSVGAVINVEASGTGGLDL---------------VCQSGPS---SWPSSVYAQS---AIYPMAHSAAQDV 264 (549)
Q Consensus 206 ~~f~~~~~~~~~v~a~INLD~~G~gg~~~---------------lfq~~p~---~~~~~~y~~~---~~~p~~~~~~~~~ 264 (549)
+...... ...+.|++|+...++..- .....+. +.+.+...+. ...|+..
T Consensus 209 ~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~~~------ 278 (348)
T 1ylo_A 209 QTATRAV----SPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQA------ 278 (348)
T ss_dssp HHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCCEE------
T ss_pred HHhhccc----CCCEEEEEeccccCCCCCCCccccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE------
Confidence 7654422 224678889876543211 0000000 0111111110 0111111
Q ss_pred cCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 008900 265 FPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFS 328 (549)
Q Consensus 265 f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la 328 (549)
+...+++||...+.....|+|.+++.- .. ...||+. |+++.+.+....+.+.++++.++
T Consensus 279 ~~~~~ggsDa~~~~~~~~gipt~~lg~-~~-~~~Hs~~---E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 279 DMFSNGGTDGGAVHLTGTGVPTLVMGP-AT-RHGHCAA---SIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp EECSSCCCHHHHHHTSTTCCCEEEEEC-CC-BSCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred eecCCCcchHHHHHHhcCCCCEEEECc-cc-CcCCCcc---eEeeHHHHHHHHHHHHHHHHHhh
Confidence 011356899998853236999997643 33 3489985 46678889999999888887664
No 46
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.15 E-value=7e-10 Score=114.87 Aligned_cols=221 Identities=14% Similarity=0.075 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEE
Q 008900 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (549)
Q Consensus 55 ra~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~ 134 (549)
+..+.+++|+ ++.+ +. ..++.+++|+.++++++| .++++| +..|++++
T Consensus 6 ~~~~~l~~Lv-~~~s-~s--g~e~~~~~~l~~~l~~~g------~~~~~d----------------------~~gnlia~ 53 (346)
T 1vho_A 6 ETGKLLMELS-NLDG-PS--GYETNVVSYIKSVIEPFV------DEAKTT----------------------RHGSLIGY 53 (346)
T ss_dssp CHHHHHHHHH-HSCC-BT--TCCHHHHHHHHHHHGGGC------SEEEEC----------------------TTSCEEEE
T ss_pred HHHHHHHHHH-cCCC-CC--cchHHHHHHHHHHHHhhC------CEEEEe----------------------cCCcEEEE
Confidence 3567899999 5543 33 344578999999999998 444442 12499999
Q ss_pred EeCCCCCCCCCeEEEeeecCCCCC---------------------------------C----------------------
Q 008900 135 ISSTDSQDTDPSVLMNGHFDGPLS---------------------------------S---------------------- 159 (549)
Q Consensus 135 i~G~~~~~~~~~Vll~aH~Dsv~~---------------------------------s---------------------- 159 (549)
++|++ .+.|++++|+|+|+. .
T Consensus 54 ~~g~~----~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~ 129 (346)
T 1vho_A 54 KKGKG----IGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKK 129 (346)
T ss_dssp ECCSS----SCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHT
T ss_pred EcCCC----CceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhccc
Confidence 98752 367999999999941 0
Q ss_pred -------------------CC-------------------CCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC
Q 008900 160 -------------------PG-------------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF 201 (549)
Q Consensus 160 -------------------pG-------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g 201 (549)
.| +.||+.|+++++++++.+.+.+ ++.++.++++..||.|
T Consensus 130 ~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG 207 (346)
T 1vho_A 130 VPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETG 207 (346)
T ss_dssp SCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSS
T ss_pred CCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccc
Confidence 01 4789999999999999997653 5678999999999999
Q ss_pred CcchHHHHhhcCccCcccEEEEeccCCCCCCce----EEecCC--------CCchhhHhhhhc---cccccccccccccC
Q 008900 202 MLGAHGFMKAHKWRDSVGAVINVEASGTGGLDL----VCQSGP--------SSWPSSVYAQSA---IYPMAHSAAQDVFP 266 (549)
Q Consensus 202 l~GS~~f~~~~~~~~~v~a~INLD~~G~gg~~~----lfq~~p--------~~~~~~~y~~~~---~~p~~~~~~~~~f~ 266 (549)
+.|++.... .. +....|.+|....++..- ....+| ++.+.+...+.+ ..|+.. .
T Consensus 208 ~~Ga~~~~~--~i--~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~~gi~~~~-------~ 276 (346)
T 1vho_A 208 CLGALTGAY--EI--NPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQE-------E 276 (346)
T ss_dssp HHHHHHTTC--CC--CCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHHTTCCCEE-------E
T ss_pred hhhHHHHhc--cc--CCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHHCCCCEEE-------E
Confidence 999876432 22 234567888765442110 000111 111111111111 111111 1
Q ss_pred CC-C-CCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 008900 267 VI-P-GDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (549)
Q Consensus 267 ~i-p-s~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (549)
.. . ++||-..+.....|+|.+++.-. .. ..||+.. +++.+.+....+.+.++++.+..
T Consensus 277 ~~~g~ggsDa~~~~~~~~gipt~~lg~~-~~-~~Hs~~E---~~~~~dl~~~~~ll~~~~~~~~~ 336 (346)
T 1vho_A 277 AVGGRSGTETDFVQLVRNGVRTSLISIP-LK-YMHTPVE---MVDPRDVEELARLLSLVAVELEV 336 (346)
T ss_dssp SSCCC----CTTHHHHHTTCEEEEEEEE-CB-STTSTTE---EECHHHHHHHHHHHHHHHHHCC-
T ss_pred eCCCCCCchHHHHHHhCCCCcEEEEehh-hc-ccccHHH---hcCHHHHHHHHHHHHHHHHHhhh
Confidence 12 2 68998888421269999986543 33 4899854 67789999999999999987755
No 47
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.13 E-value=5.3e-10 Score=118.82 Aligned_cols=135 Identities=18% Similarity=0.209 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~ 133 (549)
++..+.+++|. ++.. -|.+++++++||.++|+++| ++++.+. + ..|+++
T Consensus 28 ~~~i~~~~~l~-~ips---~s~~e~~~~~~l~~~l~~~G------~~v~~~~----~-----------------~~~l~a 76 (418)
T 1xmb_A 28 DWMVKIRRKIH-ENPE---LGYEELETSKLIRSELELIG------IKYRYPV----A-----------------ITGVIG 76 (418)
T ss_dssp HHHHHHHHHHH-HSCC---CTTCCHHHHHHHHHHHHHHT------CCEEEEE----T-----------------TTEEEE
T ss_pred HHHHHHHHHHH-hCCC---CCCChHHHHHHHHHHHHHcC------CeeEecc----C-----------------CcEEEE
Confidence 56778888888 4443 23455689999999999999 5554432 1 259999
Q ss_pred EEeCCCCCCCCCeEEEeeecCCCCCCC-----------CC---CCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 008900 134 RISSTDSQDTDPSVLMNGHFDGPLSSP-----------GA---GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (549)
Q Consensus 134 ~i~G~~~~~~~~~Vll~aH~Dsv~~sp-----------GA---~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 199 (549)
+++|.+ + +.|++.+|+|+||.+. |. .+.++|++++|++++.|++.+.+++++|+|+|..+||
T Consensus 77 ~~~~~~---~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 152 (418)
T 1xmb_A 77 YIGTGE---P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE 152 (418)
T ss_dssp EEESSS---S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT
T ss_pred EEcCCC---C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecccc
Confidence 998752 3 6899999999998531 21 1123899999999999998777788999999999999
Q ss_pred CCCcchHHHHhhcCccCcccEEEEec
Q 008900 200 LFMLGAHGFMKAHKWRDSVGAVINVE 225 (549)
Q Consensus 200 ~gl~GS~~f~~~~~~~~~v~a~INLD 225 (549)
|..|++.++++... +++.+++.++
T Consensus 153 -g~~G~~~~~~~g~~-~~~d~~i~~~ 176 (418)
T 1xmb_A 153 -GLSGAKKMREEGAL-KNVEAIFGIH 176 (418)
T ss_dssp -TTCHHHHHHHTTTT-TTEEEEEEEE
T ss_pred -ccccHHHHHHcCCc-CCCCEEEEEe
Confidence 99999999986532 2466777754
No 48
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.13 E-value=2e-10 Score=124.41 Aligned_cols=140 Identities=21% Similarity=0.202 Sum_probs=105.7
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccc
Q 008900 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (549)
Q Consensus 50 ~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~ 129 (549)
+.+.+++.+.+++|. ++.. .|.++.++++||.++++++| ++++.+. ..
T Consensus 7 ~~~~~~~~~~~~~l~-~ips---~s~~e~~~~~~l~~~l~~~G------~~~~~~~----------------------~~ 54 (487)
T 2qyv_A 7 SLQPKLLWQWFDQIC-AIPH---PSYKEEQLAQFIINWAKTKG------FFAERDE----------------------VG 54 (487)
T ss_dssp CSSSHHHHHHHHHHH-HSCC---BTTCCHHHHHHHHHHHHHTT------CEEEECT----------------------TC
T ss_pred ccCHHHHHHHHHHHH-cCCC---CCCcHHHHHHHHHHHHHHcC------CEEEEcC----------------------CC
Confidence 456788999999999 5543 23345689999999999998 5444321 24
Q ss_pred eEEEEEeCCCCCCCCCeEEEeeecCCCCCC------------------------CCCC---CCchHHHHHHHHHHHHHhc
Q 008900 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------------PGAG---DCGSCVASMLELARLTIDS 182 (549)
Q Consensus 130 NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~s------------------------pGA~---Dd~sgva~~LE~ar~L~~~ 182 (549)
|++++++|+...++.+.|++.+|+|++|.. +|+. ||+.|++++|++++. .
T Consensus 55 nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~ 131 (487)
T 2qyv_A 55 NVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES---N 131 (487)
T ss_dssp CEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---S
T ss_pred cEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---C
Confidence 999999874210234679999999999863 2665 999999999999973 2
Q ss_pred CCCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccCC
Q 008900 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (549)
Q Consensus 183 ~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G 228 (549)
+ .++++|.|+|+.+||.|+.|++.++++. . +..+++++|..+
T Consensus 132 ~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~~ 173 (487)
T 2qyv_A 132 D-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTEE 173 (487)
T ss_dssp S-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCCC
T ss_pred C-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccCC
Confidence 3 3678999999999999999999887643 2 367788888764
No 49
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.12 E-value=1.3e-09 Score=113.89 Aligned_cols=223 Identities=17% Similarity=0.114 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~ 133 (549)
.+..+.+++|+ ++. .+.| .++++++|+.+++++++ .+++.| +..|+++
T Consensus 3 ~~~~~~l~~L~-~ip-s~SG--~E~~v~~~l~~~l~~~g------~~~~~D----------------------~~GNli~ 50 (355)
T 3kl9_A 3 TTLFSKIKEVT-ELA-AVSG--HEAPVRAYLREKLTPHV------DEVVTD----------------------GLGGIFG 50 (355)
T ss_dssp HHHHHHHHHHH-TSC-CBTT--CCHHHHHHHHHHHGGGS------SEEEEC----------------------TTSCEEE
T ss_pred HHHHHHHHHHH-hCC-CCCC--CHHHHHHHHHHHHHHhC------CEEEEC----------------------CCCeEEE
Confidence 35678899998 433 3333 44688999999999998 444443 1359999
Q ss_pred EEeCCCCCCCCCeEEEeeecCCCCC-------------------------------------------------------
Q 008900 134 RISSTDSQDTDPSVLMNGHFDGPLS------------------------------------------------------- 158 (549)
Q Consensus 134 ~i~G~~~~~~~~~Vll~aH~Dsv~~------------------------------------------------------- 158 (549)
+++|+++ +.+.|++.+|+|+++.
T Consensus 51 ~~~g~~~--~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~ 128 (355)
T 3kl9_A 51 IKHSEAV--DAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKG 128 (355)
T ss_dssp EECCCST--TCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC-----------
T ss_pred EECCcCC--CCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhh
Confidence 9988631 3578999999999863
Q ss_pred ------------------------------------------C------CCCCCCchHHHHHHHHHHHHHhcCCCCCCCE
Q 008900 159 ------------------------------------------S------PGAGDCGSCVASMLELARLTIDSGWIPPRPI 190 (549)
Q Consensus 159 ------------------------------------------s------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 190 (549)
. ..+-||..||++++|+++.+++. ++++++
T Consensus 129 ~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v 206 (355)
T 3kl9_A 129 GPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNEL 206 (355)
T ss_dssp ----CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEE
T ss_pred ccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceE
Confidence 0 14779999999999999999754 578999
Q ss_pred EEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccCCCCC-----------CceEE-ecCC--CCchhhHhhh---hcc
Q 008900 191 IFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-----------LDLVC-QSGP--SSWPSSVYAQ---SAI 253 (549)
Q Consensus 191 ~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G~gg-----------~~~lf-q~~p--~~~~~~~y~~---~~~ 253 (549)
+++|+..||.|+.|++....... ...+|.+|++-++. +.+.. .++. ++.+.+...+ ...
T Consensus 207 ~~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~~g 282 (355)
T 3kl9_A 207 YLGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAG 282 (355)
T ss_dssp EEEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHHHTT
T ss_pred EEEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHHHcC
Confidence 99999999999999987655322 23478888754332 22222 1111 1122222211 112
Q ss_pred ccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 008900 254 YPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFS 328 (549)
Q Consensus 254 ~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la 328 (549)
.|+.. . . -.++||-..+.....|+|.+++... .. +.||++ |.++.+.+.+..+.+.++++.++
T Consensus 283 Ip~q~-~----~--~ggGtDa~~i~~a~~Gipt~~igvp-~~-~~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 283 IKYQY-Y----C--GKGGTDAGAAHLKNGGVPSTTIGVC-AR-YIHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp CCEEE-E----E--CSSCCTHHHHTTSTTCCCEEEEEEE-EB-SCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEE-E----C--CCcchHHHHHHHhCCCCCEEEEccC-cC-CCCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 23322 1 1 1258998887532368999987542 22 488886 46678888888898888887664
No 50
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.11 E-value=1.5e-10 Score=119.12 Aligned_cols=218 Identities=12% Similarity=-0.031 Sum_probs=137.5
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEEE
Q 008900 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (549)
Q Consensus 56 a~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i 135 (549)
..+.+++|+ ++.+ .|..++..++|+.++++++|.+. ++|.....+ .+..|+++++
T Consensus 19 ~~~~l~~Lv-~i~s---~sg~e~~v~~~l~~~l~~~g~~v------~~d~~~~~~---------------~~~gnlia~~ 73 (321)
T 3cpx_A 19 GMQLLKELC-SIHA---PSGNEEPLKDFILEYIRSNAGSW------SYQPVIYAD---------------NDLQDCIVLV 73 (321)
T ss_dssp HHHHHHHHH-HSCC---BTTCCHHHHHHHHHHHHHHGGGS------SSCCEEECS---------------GGGTTCEEEE
T ss_pred HHHHHHHHH-cCCC---CCCCHHHHHHHHHHHHHhhCCeE------EEccccccc---------------cCCccEEEEe
Confidence 677899999 5543 33344577999999999999543 222211111 1135999998
Q ss_pred eCCCCCCCCCeEEEeeecCCCC----------------------------C----------------------CCC----
Q 008900 136 SSTDSQDTDPSVLMNGHFDGPL----------------------------S----------------------SPG---- 161 (549)
Q Consensus 136 ~G~~~~~~~~~Vll~aH~Dsv~----------------------------~----------------------spG---- 161 (549)
+| . +.|++.+|+|+++ . .+|
T Consensus 74 ~g-----~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~ 147 (321)
T 3cpx_A 74 FG-----N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVT 147 (321)
T ss_dssp ES-----S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEE
T ss_pred cC-----C-ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEE
Confidence 76 1 4599999999983 0 022
Q ss_pred ---------------CCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHHHH---hhcCccCcccEEEE
Q 008900 162 ---------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFM---KAHKWRDSVGAVIN 223 (549)
Q Consensus 162 ---------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~---~~~~~~~~v~a~IN 223 (549)
+.||+.|+++++++++.+. + ++++|++.||.|+.|++... .+. -+..+.|+
T Consensus 148 ~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~---~~~~~~i~ 216 (321)
T 3cpx_A 148 FKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYET---FHVKQSLI 216 (321)
T ss_dssp ECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHH---HCCCEEEE
T ss_pred eccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccc---cCCCEEEE
Confidence 5899999999999998753 2 89999999999999998532 211 23467899
Q ss_pred eccCCCCC-------CceEEecCCC--CchhhHhhhhc---cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEE
Q 008900 224 VEASGTGG-------LDLVCQSGPS--SWPSSVYAQSA---IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIF 291 (549)
Q Consensus 224 LD~~G~gg-------~~~lfq~~p~--~~~~~~y~~~~---~~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~ 291 (549)
+|+...+. ..+....++. +.+.+...+.+ ..|+.. +...+++||-..+.....|+|.+++.-
T Consensus 217 ~D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~~gi~~q~------~~~~~GGsD~~~~~~s~~Gipt~~lG~ 290 (321)
T 3cpx_A 217 CDITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQTDIPFQL------EVEGAGASDGRELQLSPYPWDWCFIGA 290 (321)
T ss_dssp CCCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTTSSCCEEE------EECSSCCCHHHHHHHSSSCCBCCBEEC
T ss_pred EeCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHHcCCCEEE------EeCCCCCccHHHHHHhCCCCCEEEEch
Confidence 99875432 2221111111 11122111111 111111 112467899888843237999998764
Q ss_pred ecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHH
Q 008900 292 LIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (549)
Q Consensus 292 ~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (549)
.. ...||++. +++.+.+....+.+.++++.
T Consensus 291 ~~--~~~Hs~~E---~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 291 PE--KDAHTPNE---CVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp EE--BSTTSTTC---EEEHHHHHHHHHHHHHHHHH
T ss_pred hh--cccchhhh---heeHHHHHHHHHHHHHHHHh
Confidence 32 35799765 55678888888888887764
No 51
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.10 E-value=7.2e-10 Score=117.25 Aligned_cols=137 Identities=22% Similarity=0.199 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEE
Q 008900 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (549)
Q Consensus 53 ~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi 132 (549)
.++..+.+++|. ++.. -|.+++++++||.++++++| ++++.+. . ...|++
T Consensus 31 ~~~~i~~~~~l~-~ips---~s~~e~~~~~~l~~~l~~~G------~~v~~~~--~------------------~~~nv~ 80 (404)
T 1ysj_A 31 HTRLINMRRDLH-EHPE---LSFQEVETTKKIRRWLEEEQ------IEILDVP--Q------------------LKTGVI 80 (404)
T ss_dssp HHHHHHHHHHHH-HSCC---CTTCCHHHHHHHHHHHHHTT------CEECCCT--T------------------CSSCEE
T ss_pred HHHHHHHHHHHH-hcCC---CCCChHHHHHHHHHHHHHcC------CceEEec--c------------------CCceEE
Confidence 456788888888 4443 23455689999999999998 4432221 0 125999
Q ss_pred EEEeCCCCCCCCCeEEEeeecCCCCCCC-----------C---CCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcc
Q 008900 133 MRISSTDSQDTDPSVLMNGHFDGPLSSP-----------G---AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAE 198 (549)
Q Consensus 133 ~~i~G~~~~~~~~~Vll~aH~Dsv~~sp-----------G---A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~E 198 (549)
++++|++ +.+.|++.+|+|+||.+. | +.+.++|++++|++++.|++.+.+++++|+|+|..+|
T Consensus 81 a~~~g~~---~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~E 157 (404)
T 1ysj_A 81 AEIKGRE---DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAE 157 (404)
T ss_dssp EEEECSS---CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCT
T ss_pred EEEeCCC---CCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEeccc
Confidence 9998753 347899999999998531 2 1234589999999999999876678899999999999
Q ss_pred cCCCcchHHHHhhcCccCcccEEEEe
Q 008900 199 ELFMLGAHGFMKAHKWRDSVGAVINV 224 (549)
Q Consensus 199 E~gl~GS~~f~~~~~~~~~v~a~INL 224 (549)
|. ..|++.++++.. .+++.+++.+
T Consensus 158 E~-~~G~~~~~~~g~-~~~~d~~i~~ 181 (404)
T 1ysj_A 158 EI-AAGARKVLEAGV-LNGVSAIFGM 181 (404)
T ss_dssp TT-TCHHHHHHHTTT-TTTEEEEEEE
T ss_pred cc-chhHHHHHhcCC-CcCCCEEEEE
Confidence 99 789999988532 2345666665
No 52
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.96 E-value=2.1e-09 Score=113.51 Aligned_cols=140 Identities=17% Similarity=0.023 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEE
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~ 133 (549)
+++.+..++|. ++. .-|.++.++++||.++|+++| ++++.+. .| ...|+++
T Consensus 16 ~~~~~~~~~l~-~~p---e~s~~E~~~~~~i~~~l~~~G------~~v~~~~---~g----------------~~~~via 66 (394)
T 3ram_A 16 YSYIEISHRIH-ERP---ELGNEEIFASRTLIDRLKEHD------FEIETEI---AG----------------HATGFIA 66 (394)
T ss_dssp HHHHHHHHHHH-HSC---CCTTCCHHHHHHHHHHHHHTT------CEEEEEE---TT----------------EEEEEEE
T ss_pred HHHHHHHHHHH-hCC---CCCcchHHHHHHHHHHHHHcC------CeEEeCC---CC----------------CceEEEE
Confidence 45666777776 333 345566799999999999999 5555442 11 1359999
Q ss_pred EEeCCCCCCCCCeEEEeeecCCCCCC-CCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC-CcchH-HHHh
Q 008900 134 RISSTDSQDTDPSVLMNGHFDGPLSS-PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF-MLGAH-GFMK 210 (549)
Q Consensus 134 ~i~G~~~~~~~~~Vll~aH~Dsv~~s-pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g-l~GS~-~f~~ 210 (549)
+++|.. +.+.|++.+|+|++|.- .+.+.|. -.+++|.+++.|++.+.+++++|.|+|+.+||.| ..|++ .+++
T Consensus 67 ~~~g~~---~g~~i~l~ah~D~vpg~~ha~G~d~-~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~ 142 (394)
T 3ram_A 67 TYDSGL---DGPAIGFLAEYDALPGLGHACGHNI-IGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVK 142 (394)
T ss_dssp EEECSS---SSCEEEEEECCCCCTTTSSTTCHHH-HHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHH
T ss_pred EEeCCC---CCCEEEEEEecccCCCcceECCccH-HHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHH
Confidence 998853 35789999999999831 1222232 3467888999998765568899999999999998 58999 7777
Q ss_pred hcCccCcccEEEEeccC
Q 008900 211 AHKWRDSVGAVINVEAS 227 (549)
Q Consensus 211 ~~~~~~~v~a~INLD~~ 227 (549)
+. ..+++.+++.+|..
T Consensus 143 ~g-~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 143 AG-VIDQIDIALMIHPG 158 (394)
T ss_dssp HT-GGGGCSEEECCEEE
T ss_pred cC-CcccCCEEEEECCc
Confidence 43 23467888888754
No 53
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.86 E-value=4.1e-08 Score=102.45 Aligned_cols=151 Identities=17% Similarity=0.084 Sum_probs=93.8
Q ss_pred CCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEeccCCCCCCce------
Q 008900 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDL------ 234 (549)
Q Consensus 161 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~~G~gg~~~------ 234 (549)
.+-||..||++++|+++.+++ ++.+++++|++-||.|+.|++.-....+ . ..+|.+|++-++.+..
T Consensus 182 ~~lDnr~g~~~~l~~l~~l~~----~~~~v~~~ft~qEEVG~~ga~~aa~~i~--p--d~~i~~Dv~~a~dp~~~~~~~~ 253 (354)
T 2vpu_A 182 PYLDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGLRGARVASYAIN--P--EVGIAMDVTFAKQPHDKGKIVP 253 (354)
T ss_dssp TTHHHHHHHHHHHHHHHHCCC----CSSEEEEEECSCCTTTSHHHHHHHHHHC--C--SEEEEEEEEECCCTTSTTCCCC
T ss_pred ecCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccCccchhhhhcccC--C--CEEEEecccccCCCCcccccCc
Confidence 688999999999999998753 6789999999999999999886544221 2 3577777653322211
Q ss_pred ------EEecCCC--CchhhHhhh---hccccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccC
Q 008900 235 ------VCQSGPS--SWPSSVYAQ---SAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHD 303 (549)
Q Consensus 235 ------lfq~~p~--~~~~~~y~~---~~~~p~~~~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~D 303 (549)
+...+.. +.+.+...+ ....|+.... ...+++||-..+.....|+|.+++.-. .. ..||++.
T Consensus 254 ~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~gIp~q~~~-----~~g~gGtDa~~i~~a~~Gipt~~Igvp-~~-~~Hs~~E 326 (354)
T 2vpu_A 254 ELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEP-----SPRPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQVE 326 (354)
T ss_dssp CTTSCCEEEESTTSCHHHHHHHHHHHHHTTCCCEEEE-----CCSCCSSTHHHHHTSTTCCEEEEEEEE-EB-STTSTTC
T ss_pred eECCcceEcCCCCCCHHHHHHHHHHHHHcCCCcEEEe-----CCCCCccHHHHHHHhcCCCCEEEECcc-cc-cCcCcce
Confidence 1111111 111221111 1111221111 011258998887532368999997643 22 4788765
Q ss_pred CcCCCCHHHHHHHHHHHHHHHHHHhc
Q 008900 304 TVDRLLPGSVQARGDNLFNVLKAFSN 329 (549)
Q Consensus 304 t~d~id~~~lq~~g~~~l~l~~~la~ 329 (549)
.++.+.+.+..+.+.++++.++.
T Consensus 327 ---~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 327 ---LADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp ---EEEHHHHHHHHHHHHHHHHHCCC
T ss_pred ---EeeHHHHHHHHHHHHHHHHhccH
Confidence 56688888899999998887744
No 54
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.80 E-value=3.6e-08 Score=105.70 Aligned_cols=158 Identities=18% Similarity=0.161 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeec-Cc-ccce-----------ec--c
Q 008900 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVN-GS-FNMI-----------FL--G 118 (549)
Q Consensus 54 era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~-g~-~~~~-----------~~--~ 118 (549)
++..+..++|- ++ +.-+.++.++.+||.++|+++| ++++......+ +. ...+ .+ +
T Consensus 14 ~~~~~~~~~lh-~~---Pe~~~~E~~t~~~i~~~L~~~G------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (445)
T 3io1_A 14 PSMTQWRRDFH-LH---AESGWLEFRTASKVADILDGLG------YQLALGRDVIDADSRMGLPDEETLARAFERAREQG 83 (445)
T ss_dssp HHHHHHHHHHH-HT---CCCTTCCHHHHHHHHHHHHHTT------CEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHH-hC---CCCCCcHHHHHHHHHHHHHHCC------CeEEecccccccccccccccchhhhhhhhhhcccc
Confidence 44555566665 32 3345566689999999999999 55433210000 00 0000 00 0
Q ss_pred c-ccccc-c-cccceEEEEEeCCCCCCCCCeEEEeeecCCCCCC------------------CCCC---CCchHHHHHHH
Q 008900 119 H-SISLG-Y-RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------PGAG---DCGSCVASMLE 174 (549)
Q Consensus 119 ~-~~~~~-~-~~~~NVi~~i~G~~~~~~~~~Vll~aH~Dsv~~s------------------pGA~---Dd~sgva~~LE 174 (549)
- +.... . ....|++++++|.. +.+.|++.+|+|++|.. +|.. ....++|++|.
T Consensus 84 ~~~~~~~~~~~~~~~vva~~~~~~---~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~ 160 (445)
T 3io1_A 84 APERWLPAFEGGFAGVVATLDTGR---PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG 160 (445)
T ss_dssp CCTTTGGGGTTTCCCEEEEEECSS---CCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred ccccccccccCCCCEEEEEEeCCC---CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence 0 00000 0 13579999998753 35789999999999942 1211 11246999999
Q ss_pred HHHHHHhcCCCCCCCEEEEEeCcccCCCcchHHHHhhcCccCcccEEEEecc
Q 008900 175 LARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (549)
Q Consensus 175 ~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~INLD~ 226 (549)
+++.|++.+.+++++|+|+|..+|| +..|++.++++.. .+++.+++.++.
T Consensus 161 aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g~-~~~~d~~~~~h~ 210 (445)
T 3io1_A 161 LAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAGV-VDDVDYFTAIHI 210 (445)
T ss_dssp HHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTTT-TTTCSEEEEEEE
T ss_pred HHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcCC-ccccceeEEEec
Confidence 9999998777789999999999999 6689999988532 346788887764
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.54 E-value=7e-07 Score=92.68 Aligned_cols=212 Identities=18% Similarity=0.204 Sum_probs=132.0
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEEE
Q 008900 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (549)
Q Consensus 56 a~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i 135 (549)
+.+.+++|++. |.++| .++++++|+++++++++ .++++| +..|+++++
T Consensus 13 ~~~~l~~L~~~--pspSG--~E~~v~~~i~~~l~~~~------~e~~~D----------------------~~Gnvi~~~ 60 (343)
T 3isx_A 13 MKELIRKLTEA--FGPSG--REEEVRSIILEELEGHI------DGHRID----------------------GLGNLIVWK 60 (343)
T ss_dssp CHHHHHHHHHS--CCBTT--CCHHHHHHHHHHHTTTC------SEEEEC----------------------TTCCEEEEE
T ss_pred HHHHHHHHHhC--CCCCC--chHHHHHHHHHHHHHhC------CEEEEC----------------------CCCCEEEEE
Confidence 45788899843 33444 45688999999999998 444443 235999988
Q ss_pred eCCCCCCCCCeEEEeeecCCCCC---------------------------------------------------------
Q 008900 136 SSTDSQDTDPSVLMNGHFDGPLS--------------------------------------------------------- 158 (549)
Q Consensus 136 ~G~~~~~~~~~Vll~aH~Dsv~~--------------------------------------------------------- 158 (549)
|. +.+.|++.||+|+++.
T Consensus 61 -g~----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~ 135 (343)
T 3isx_A 61 -GS----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLS 135 (343)
T ss_dssp -CC----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCC
T ss_pred -CC----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCC
Confidence 42 2467999999999752
Q ss_pred ---------------------------------------CCCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 008900 159 ---------------------------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (549)
Q Consensus 159 ---------------------------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 199 (549)
...+-||..||++++|+++.++ .+.+++++|+.-||
T Consensus 136 ~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~-----~~~~~~~~ft~qEE 210 (343)
T 3isx_A 136 FDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIK-----PAVTLYGVFSVQEE 210 (343)
T ss_dssp GGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCC-----CSSEEEEEEECCCC
T ss_pred cceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhcc-----CCCeEEEEEECCcc
Confidence 0158899999999999998874 26899999999999
Q ss_pred CCCcchHHHHhhcCccCcccEEEEeccCCCCC-CceE------EecCCC-----------CchhhHhhh---hccccccc
Q 008900 200 LFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-LDLV------CQSGPS-----------SWPSSVYAQ---SAIYPMAH 258 (549)
Q Consensus 200 ~gl~GS~~f~~~~~~~~~v~a~INLD~~G~gg-~~~l------fq~~p~-----------~~~~~~y~~---~~~~p~~~ 258 (549)
.|+.|++.-.... .. ..+|.+|++-++. +..- .-.||- +.+.+...+ ...-|+-.
T Consensus 211 VG~~Ga~~aa~~i--~p--d~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~~gIp~Q~ 286 (343)
T 3isx_A 211 VGLVGASVAGYGV--PA--DEAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQM 286 (343)
T ss_dssp TTSCCSTTTGGGC--CC--SEEEEEEEEECCCSTTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred cCchhHHHHhhcC--CC--CEEEEEeCcCCCCCCCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEE
Confidence 9999987544322 12 3477888653322 1110 001110 000111100 01111111
Q ss_pred cccccccCCCCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHH
Q 008900 259 SAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVL 324 (549)
Q Consensus 259 ~~~~~~f~~ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~ 324 (549)
++ .-..+||-.++.....|+|..++.... . +.||++. .++.+.+++..+.+.+++
T Consensus 287 ----~v--~~ggGTDa~~i~~a~~Gipt~~Igvp~-r-~~Hs~~E---~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 287 ----EV--LTFGGTNAMGYQRTREGIPSATVSIPT-R-YVHSPSE---MIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp ----CC--CBCCCSSHHHHHHHTSSCCEEEEEEEE-B-STTSTTE---EECHHHHHHHHHHHHHHH
T ss_pred ----ec--CCCCchHHHHHHHhcCCCCEEEEcccc-c-cccchhh---EecHHHHHHHHHHHHHHH
Confidence 01 112589987764323699999986432 2 4788865 456777777777766655
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.41 E-value=7.4e-06 Score=81.54 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=43.5
Q ss_pred CCCCCchHHHhhcCCCCcEEEEEEecCCCcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 008900 268 IPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (549)
Q Consensus 268 ips~sD~~~F~~~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~~ 330 (549)
.+++||-..|.....|+|.+.+.-- .. ..||+.. +++.+.+.+..+.+.+++++|...
T Consensus 293 ~~ggTDa~~~~~~~~Giptv~~G~g-~~-~~Ht~~E---~v~i~dl~~~~~ll~~~i~~L~~~ 350 (354)
T 2wzn_A 293 RPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQVE---LADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp SCCSSHHHHHHTSTTCCEEEEEEEE-EB-STTSTTC---EEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred cccccHHHHHHHhcCCCCEEEECcc-cC-CCCcccE---EEEHHHHHHHHHHHHHHHHhCccc
Confidence 3568998876422269999997753 23 3699864 677889999999999999988653
No 57
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.69 E-value=0.0089 Score=63.84 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=39.7
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccc
Q 008900 51 FSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE 93 (549)
Q Consensus 51 fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~ 93 (549)
++.+++++++++|++++|+|..||++++++++|+.++|++.|.
T Consensus 18 ~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~ 60 (444)
T 3iib_A 18 QSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGF 60 (444)
T ss_dssp HHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred hcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 4456899999999988999999999999999999999999984
No 58
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=94.20 E-value=0.06 Score=56.82 Aligned_cols=44 Identities=20% Similarity=0.300 Sum_probs=40.3
Q ss_pred cCcCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHcccc
Q 008900 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE 93 (549)
Q Consensus 48 ~~~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~ 93 (549)
...++.++++++++.|++. +|..||++++++++|+.++|+++|.
T Consensus 10 ~~~i~~~~~~~~l~~Ls~~--~R~~Gs~g~~~a~~yi~~~~~~~Gl 53 (421)
T 2ek8_A 10 TKRTDAENMYNTIQFLSQA--PRVAGSPEELKAVRYIEQQFKSYGY 53 (421)
T ss_dssp HTTCCHHHHHHHHHHHTTS--CCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhCC--CCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 3578999999999999954 9999999999999999999999994
No 59
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=88.34 E-value=0.6 Score=49.46 Aligned_cols=142 Identities=11% Similarity=-0.002 Sum_probs=81.0
Q ss_pred CCCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHHHHhhc-C-ccCcc-------------cEEEEe
Q 008900 160 PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAH-K-WRDSV-------------GAVINV 224 (549)
Q Consensus 160 pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~-~-~~~~v-------------~a~INL 224 (549)
..+-||..||.++||+++.+. +++.++.++| +-||.|..|++.-.... + .-+++ ..+|.+
T Consensus 231 s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is~ 305 (428)
T 2ijz_A 231 GARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVSA 305 (428)
T ss_dssp CCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEEE
T ss_pred eecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEEE
Confidence 468899999999999998764 3567888888 99999999988644322 1 00111 678888
Q ss_pred ccCCCCCCceE--Ee--------cCCCCchhhHhhh--hccccccc----cccc------cccCC---CCCCCchHHHhh
Q 008900 225 EASGTGGLDLV--CQ--------SGPSSWPSSVYAQ--SAIYPMAH----SAAQ------DVFPV---IPGDTDYRIFSQ 279 (549)
Q Consensus 225 D~~G~gg~~~l--fq--------~~p~~~~~~~y~~--~~~~p~~~----~~~~------~~f~~---ips~sD~~~F~~ 279 (549)
|++-+..+..- .+ .|| .++.+.+ ...++... .+++ +.+-. .+++||-.++..
T Consensus 306 Dv~ha~~Pn~~~~~~~~~~~~lg~G~---vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~~~~~~d~~gGsd~g~i~~ 382 (428)
T 2ijz_A 306 DNAHGVHPNYADRHDANHGPALNGGP---VIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITA 382 (428)
T ss_dssp CCCCCCCSSCGGGCCSSCCCSSSCCC---BCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCBCCCCSSCCCCCCCSTTTG
T ss_pred ecccccCCCCcccccccCCcccCCCc---EEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEEEEEeCCCCccchHHHHHH
Confidence 97654333210 10 111 0111111 00111000 0001 11111 457888777753
Q ss_pred cCCCCcEEEEEEecCCCcCCCccCCcCCCCHH
Q 008900 280 DYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPG 311 (549)
Q Consensus 280 ~~~giPgld~a~~~~~y~YHT~~Dt~d~id~~ 311 (549)
...|+|.+|+..- --.-||++.+...-|..
T Consensus 383 ~~~Gi~tvdiGip--~~~mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 383 SQVGVRTVDIGLP--TFAMHSIRELAGSHDLA 412 (428)
T ss_dssp GGGSCCEEEECCC--CCSCSSSSCCCCSSHHH
T ss_pred hCCCCCEEEEchh--hcccchHHHHhhHHHHH
Confidence 2379999998632 22579998887766643
No 60
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=88.03 E-value=0.13 Score=57.28 Aligned_cols=45 Identities=16% Similarity=0.313 Sum_probs=39.5
Q ss_pred cCcHHHHHHHHHHHHH-hcCCCCCCChhHHHHHHHHHHHHHccccc
Q 008900 50 RFSEARAIQHVRVLAD-EIGDRQEGRPGLREAAVYIKTQLEGIKER 94 (549)
Q Consensus 50 ~fs~era~~~l~~La~-~ig~R~~gS~~~e~a~~yl~~~l~~ig~~ 94 (549)
.++++++++|++.|++ ++++|..||++++++++||.++|+++|.+
T Consensus 14 ~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 14 KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 3566789999999994 36899999999999999999999999954
No 61
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=87.28 E-value=0.55 Score=52.91 Aligned_cols=44 Identities=14% Similarity=0.036 Sum_probs=39.6
Q ss_pred CcCcHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHccccc
Q 008900 49 DRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKER 94 (549)
Q Consensus 49 ~~fs~era~~~l~~La~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~ 94 (549)
..++.++++++++.|++. ||..||+++.++++|+.+++++.|.+
T Consensus 20 ~~~~~~~i~~~l~~lt~~--ph~aGt~~~~~~a~yi~~~~~~~Gl~ 63 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTKL--PHLAGTEQNFLLAKKIQTQWKKFGLD 63 (707)
T ss_dssp HHCCHHHHHHHHHHHSSS--CCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred HhCCHHHHHHHHHHHhcC--CCcCCCHhHHHHHHHHHHHHHHcCCC
Confidence 468899999999999943 99999999999999999999999943
No 62
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=77.80 E-value=0.79 Score=49.03 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=36.8
Q ss_pred CCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHH
Q 008900 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHG 207 (549)
Q Consensus 161 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~ 207 (549)
++-||..||.++||+++.+. .+++++++++++-||.|..|++.
T Consensus 258 ~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~g 300 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATG 300 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTT
T ss_pred ecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCccccc
Confidence 57799999999999987653 46789999999999999987763
No 63
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=76.55 E-value=1.1 Score=47.66 Aligned_cols=41 Identities=22% Similarity=0.177 Sum_probs=35.5
Q ss_pred CCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchH
Q 008900 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAH 206 (549)
Q Consensus 161 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~ 206 (549)
++-||-.||.+++|+++.+ .++.++++++++-||.|..|++
T Consensus 246 ~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~ 286 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNT 286 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSS
T ss_pred ecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchh
Confidence 6779999999999998865 3678999999999999987765
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=75.09 E-value=0.45 Score=50.86 Aligned_cols=44 Identities=25% Similarity=0.243 Sum_probs=32.0
Q ss_pred CCCCCchHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCCcchHH
Q 008900 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHG 207 (549)
Q Consensus 161 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~ 207 (549)
++-||..||+++||+++.+.+ .+++++++++++-||.|..|++.
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~g 295 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTG 295 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC-------
T ss_pred ecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchh
Confidence 577999999999999876532 47789999999999999988764
No 65
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=53.44 E-value=5.1 Score=43.10 Aligned_cols=46 Identities=15% Similarity=-0.041 Sum_probs=33.8
Q ss_pred CCCCCchHHHHHHHHHHHHHhcC----CCCCCCEEEEEeCcccCCCcchHH
Q 008900 161 GAGDCGSCVASMLELARLTIDSG----WIPPRPIIFLFNGAEELFMLGAHG 207 (549)
Q Consensus 161 GA~Dd~sgva~~LE~ar~L~~~~----~~p~~~I~flf~~~EE~gl~GS~~ 207 (549)
++-||-.||.+++|+++.+.+.. ..+. ..++++++-||.|..|++.
T Consensus 282 ~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~-~~v~v~~dqEEVGs~ga~g 331 (496)
T 3vat_A 282 PRLDNLHSCFCALQALIDSCSAPASLAADPH-VRMIALYDNEEVGSESAQG 331 (496)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSHHHHHHCCS-EEEEEEESCGGGTSCSSSS
T ss_pred eccccHHHHHHHHHHHHhhhccccccccCCC-cEEEEEEccCCcCCCcchh
Confidence 67799999999999998775310 0123 4449999999999876653
No 66
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=52.41 E-value=7.3 Score=41.11 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=41.6
Q ss_pred CCChhHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEEEeCCCCCCCCCeEEEee
Q 008900 72 EGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNG 151 (549)
Q Consensus 72 ~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i~G~~~~~~~~~Vll~a 151 (549)
..++..-.+++++.+++++.|-+.-... +-..-.+.+.|.. .+...|+++...|++-...++.++++|
T Consensus 13 ~~~~t~~h~v~~~~~~l~~~Gf~~l~e~--~~w~l~~g~k~~~----------~~~~g~lia~~~G~~~~~~~~~~ii~A 80 (428)
T 2ijz_A 13 KASPTPFHATASLARRLEAAGYRRLDER--DAWHTETGGRYYV----------TRNDSSLIAIRLGRRSPLESGFRLVGA 80 (428)
T ss_dssp TTTHHHHHHHCCSHHHHHHHHHHHSCC----------CCCCEE----------CTTTTCCEEEECC--CCSTTCCEEEEC
T ss_pred HcCCCHHHHHHHHHHHHHHcCCeEcccc--cccccCCCCEEEE----------ECCCCEEEEEEECCcCCCCCCcEEEEE
Confidence 3456667889999999999885321110 1101112222221 122369999988864111246899999
Q ss_pred ecCCCC
Q 008900 152 HFDGPL 157 (549)
Q Consensus 152 H~Dsv~ 157 (549)
|.|+..
T Consensus 81 H~Dspg 86 (428)
T 2ijz_A 81 HTDSPC 86 (428)
T ss_dssp BCCCSE
T ss_pred cCCcCC
Confidence 999963
No 67
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=47.25 E-value=40 Score=26.59 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=44.1
Q ss_pred CCCCCchHHHhhcCCCCcEEEEEEecCC-CcCCCccCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 008900 268 IPGDTDYRIFSQDYGDIPGLDIIFLIGG-YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (549)
Q Consensus 268 ips~sD~~~F~~~~~giPgld~a~~~~~-y~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~~ 330 (549)
.++.||-+.|.+ .|+|.+.+.-.... ..-|+..+ +++-+.+.+..+....+++.+.+.
T Consensus 23 ~~g~TDar~~~~--~gip~v~fGPg~~~~~~~H~~dE---~v~i~~l~~~~~iy~~~i~~~~~~ 81 (88)
T 1q7l_B 23 MPAAGDNRYIRA--VGVPALGFSPMNRTPVLLHDHDE---RLHEAVFLRGVDIYTRLLPALASV 81 (88)
T ss_dssp CCSCSHHHHHHH--TTCCEEEECCCCSCCCCTTSTTC---EEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred eceeCcHHHHHH--cCCCEEEECCCCCCcccccCCCC---eeEHHHHHHHHHHHHHHHHHHHcC
Confidence 567899999975 69998876533211 24577754 677889999999999999999775
No 68
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=45.20 E-value=18 Score=38.29 Aligned_cols=66 Identities=17% Similarity=0.037 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEEEeCCCCCCCCCeEEEeeecCC
Q 008900 76 GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDG 155 (549)
Q Consensus 76 ~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i~G~~~~~~~~~Vll~aH~Ds 155 (549)
..-.+++++.+++++-|-+.-.. .+.-.+.+.|.. .+...|+++...|+.+ .++.++++||.|+
T Consensus 32 t~~h~v~~~~~~l~~~Gf~~l~e----~~~l~~g~k~~~----------~r~~~~lia~~~g~~~--~~g~~ii~AH~Ds 95 (450)
T 2glf_A 32 TERMTVKEIKRILDESGFVPLED----FAGDPMNMTVYA----------VNRGKAIAAFRVVDDL--KRGLNLVVAHIDS 95 (450)
T ss_dssp SHHHHHHHHHHHHHTTTCEETTS----CCSCTTSBCEEE----------ESSSSCEEEEEBCSCG--GGCCEEEEEECCC
T ss_pred CHHHHHHHHHHHHHHCcCEEccc----ccCCCCCCEEEE----------EcCCCEEEEEEeCCCC--CCCeEEEEEeccc
Confidence 34578999999999998432110 011111222211 1223699998887521 2368999999999
Q ss_pred CC
Q 008900 156 PL 157 (549)
Q Consensus 156 v~ 157 (549)
+.
T Consensus 96 p~ 97 (450)
T 2glf_A 96 PR 97 (450)
T ss_dssp CE
T ss_pred CC
Confidence 63
No 69
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=37.65 E-value=22 Score=38.15 Aligned_cols=66 Identities=17% Similarity=0.180 Sum_probs=37.9
Q ss_pred ChhHHHHHHHHHHHHHcccccCCCceeEEEEe-----eeecCcccceeccccccccccccceEEEEEeCCCCCCCCCeEE
Q 008900 74 RPGLREAAVYIKTQLEGIKERAGPKFRIEIEE-----NVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVL 148 (549)
Q Consensus 74 S~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~-----~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i~G~~~~~~~~~Vl 148 (549)
++..-.+++++.++|++-|-+. +++ -.+.|.|.. .++...+|+-.-|......+..-+
T Consensus 49 spT~~hav~~~~~~L~~aGF~~-------L~e~~~w~l~~ggkyyv----------~rn~ssliAf~vg~~~~~~~G~~i 111 (496)
T 3vat_A 49 SPSPFHAVAECRSRLLQAGFHE-------LKETESWDIKPESKYFL----------TRNSSTIIAFAVGGQYVPGNGFSL 111 (496)
T ss_dssp CSSHHHHHHHHHHHHHHTTCEE-------CCTTSCCCCCTTCEEEE----------EETTTEEEEEEECTTCCTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHCcCeE-------ccccCCcccCCCCEEEE----------ECCCcEEEEEEeCCCCCCCCCeEE
Confidence 3445688999999999988322 221 112222211 133446676544432122356889
Q ss_pred EeeecCCC
Q 008900 149 MNGHFDGP 156 (549)
Q Consensus 149 l~aH~Dsv 156 (549)
++||.||.
T Consensus 112 vgaHtDSP 119 (496)
T 3vat_A 112 IGAHTDSP 119 (496)
T ss_dssp EEEECCCC
T ss_pred EEEeccCC
Confidence 99999994
No 70
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=27.31 E-value=1e+02 Score=33.64 Aligned_cols=69 Identities=14% Similarity=0.009 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEEEeCCCCCCCCC-eEEEeeecC
Q 008900 76 GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDP-SVLMNGHFD 154 (549)
Q Consensus 76 ~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i~G~~~~~~~~-~Vll~aH~D 154 (549)
..-.+++++.++|++.|-+.-..-+ -..-.+.|.|.. .++..+|++-.-|+.-...+. .-+++||.|
T Consensus 22 T~~HaV~~~~~~L~~aGF~~L~E~~--~W~l~~Ggkyy~----------~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtD 89 (571)
T 4eme_A 22 SNFLACKNLKERLENNGFINLSEGE--TWNLNKNEGYVL----------CKENRNICGFFVGKNFNIDTGSILISIGHID 89 (571)
T ss_dssp SHHHHHHHHHHHHHHTTCEECCTTS--CCCCCTTCEEEE----------EETTTEEEEEEECTTCCTTTCCEEEEEEECC
T ss_pred CHHHHHHHHHHHHHHCcCEEccccC--CcccCCCCEEEE----------EcCCCEEEEEEeCCcCCCCCCcEEEEEEecc
Confidence 3457899999999998832211000 001112232211 144567888777764112345 789999999
Q ss_pred CC
Q 008900 155 GP 156 (549)
Q Consensus 155 sv 156 (549)
|.
T Consensus 90 SP 91 (571)
T 4eme_A 90 SC 91 (571)
T ss_dssp CC
T ss_pred CC
Confidence 94
No 71
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=22.24 E-value=33 Score=36.42 Aligned_cols=64 Identities=14% Similarity=0.130 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccccccceEEEEEe-CCCCCCCCCeEEEeeecCCC
Q 008900 78 REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRIS-STDSQDTDPSVLMNGHFDGP 156 (549)
Q Consensus 78 e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~~~~~NVi~~i~-G~~~~~~~~~Vll~aH~Dsv 156 (549)
-.+++++.+++++.|-+.-... +.-.+.+.|. ..+..|+++.+. |+++. .+..-+++||.|+.
T Consensus 36 ~hav~~~~~~l~~~Gf~~l~e~----~~l~~g~~~~-----------~~r~g~~i~a~~~G~~~~-~~g~~ii~AH~Dsp 99 (458)
T 1y7e_A 36 REVTAYALDKAKKLGFINAEEK----KNLMPGDKIF-----------YTCREKSVAFAIIGKNPI-EDGMNFIVSHTDSP 99 (458)
T ss_dssp HHHHHHHHHHHHTTTCEESTTC----CCCCTTCEEE-----------CBCSSSCBCCEECCSSCG-GGCCEECCCBCCCC
T ss_pred HHHHHHHHHHHHHcCCcccccc----cccCCCCeEE-----------EECCCCEEEEEEeCCCCC-CCCcEEEEEccCcC
Confidence 4889999999999994321100 0011112121 122346666654 65321 12345999999995
Q ss_pred C
Q 008900 157 L 157 (549)
Q Consensus 157 ~ 157 (549)
.
T Consensus 100 g 100 (458)
T 1y7e_A 100 R 100 (458)
T ss_dssp B
T ss_pred C
Confidence 3
No 72
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=20.76 E-value=26 Score=37.27 Aligned_cols=66 Identities=17% Similarity=0.210 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHcccccCCCceeEEEEeeeecCcccceeccccccccc-cccce-EEEEEeCCCCCCCCCeEEEeeecCCC
Q 008900 79 EAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY-RNHTN-IVMRISSTDSQDTDPSVLMNGHFDGP 156 (549)
Q Consensus 79 ~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~~-~~~~N-Vi~~i~G~~~~~~~~~Vll~aH~Dsv 156 (549)
.+++++.+++++-|.+ ++++... ..|.. .+....| .+..| +++...|+++. .+..++++||.|+.
T Consensus 39 hav~~~~~~l~~sGfe-------~l~e~~~-~~w~l----~~g~~~~~~~~g~slia~~~G~~~~-~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 39 ECVTELIKTAEKSGYR-------NIEDILA-KGETL----KEGDKVYANNRGKGLIMFLIGKEPL-YTGFKILGAHIDSP 105 (461)
T ss_dssp STHHHHHHHSCCSSCC-------CTTCCCS-TTTTC----CTTCCCEEEETTTEEEECCCCSSCG-GGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCh-------hHHHHhh-Hhhcc----CCCCEEEEEcCCCEEEEEEeCCcCc-cCCceEEEEecCcC
Confidence 5689999999998843 2221100 01100 0000011 22234 99988886421 13469999999996
Q ss_pred C
Q 008900 157 L 157 (549)
Q Consensus 157 ~ 157 (549)
.
T Consensus 106 g 106 (461)
T 2glj_A 106 R 106 (461)
T ss_dssp B
T ss_pred C
Confidence 3
Done!