Citrus Sinensis ID: 008909

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------55

MPSAAAAHTLSSSISLISAIPKLPFSSSFSSSFPILRSFSPQLLSLSLHKHYPLPLPLTRHLRSLSPSNDAVSSSNDDAFEDSPFEDEDDDAEYEDVDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKYVLYLATSFT

cccHHHHHHcccccHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccccEEEEEccccccHHHHHHHHHccccEECcccccccccccccEEEEccEEEEEEEcccccccccccccHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHccccccEEEEEEcccccccccccHHHHHHccccccccccccccccHHHHHHHHHHccccccccccccccccccEEEEEccccccHHHHHHHHHcccccccccccccccccccccCEcccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHccEEEEEEEcccccHHHHHHHHHHHHHHccEEEEEEEcccccccccHHHHHHHHHHHHHHccccccccCEEEEccccccHHHHHHHHHHHHc

***********SSISLISAIPKLPFSSSFSSSFPILRSFSPQLLSLSLHKHYPLPLPLTRH********************D**FE**DDDAEYED**********GIDVDALEREAKDAVREYSSLLSRQL***DETDDRKDS************NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVE**EDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKYVLYLATSFT

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MPSAAAAHTLSSSISLISAIPKLPFSSSFSSSFPILRSFSPQLLSLSLHKHYPLPLPLTRHLRSLSPSNDAVSSSNDDAFEDSPFEDEDDDAEYEDVDDESDGQDFGIDxxxxxxxxxxxxxxxxxxxxxQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKYVLYLATSFT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
GTPase Der	GTPase that plays an essential role in the late steps of ribosome biogenesis.	probable	B2J1L2
GTPase Der	GTPase that plays an essential role in the late steps of ribosome biogenesis.	probable	Q8YZH7
GTPase Der	GTPase that plays an essential role in the late steps of ribosome biogenesis.	probable	Q3M929

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2HJG, chain A
Confidence level:very confident
Coverage over the Query: 163-189,201-217,257-548
View the alignment between query and template
View the model in PyMOL

Template: 3RLF, chain A
Confidence level:confident
Coverage over the Query: 164-188,201-292
View the alignment between query and template
View the model in PyMOL