Query 008915
Match_columns 549
No_of_seqs 340 out of 1656
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 14:40:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008915.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008915hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 100.0 3.6E-33 1.2E-37 291.3 31.0 310 110-444 4-330 (397)
2 3cgv_A Geranylgeranyl reductas 100.0 5.7E-30 2E-34 268.5 32.1 308 110-443 4-329 (397)
3 3fmw_A Oxygenase; mithramycin, 100.0 2.1E-30 7.3E-35 287.0 24.4 315 109-447 48-377 (570)
4 3rp8_A Flavoprotein monooxygen 100.0 3.3E-29 1.1E-33 265.2 26.7 340 109-491 22-386 (407)
5 2qa1_A PGAE, polyketide oxygen 100.0 1.3E-28 4.3E-33 268.8 29.6 309 109-446 10-331 (500)
6 2qa2_A CABE, polyketide oxygen 100.0 1.1E-28 3.9E-33 269.1 29.2 310 109-446 11-332 (499)
7 3atr_A Conserved archaeal prot 100.0 8.8E-28 3E-32 258.5 29.3 306 110-443 6-334 (453)
8 3nix_A Flavoprotein/dehydrogen 100.0 8.7E-28 3E-32 254.6 26.7 305 110-430 5-330 (421)
9 1k0i_A P-hydroxybenzoate hydro 100.0 2E-27 6.9E-32 250.0 23.2 313 110-445 2-331 (394)
10 2x3n_A Probable FAD-dependent 100.0 9.9E-28 3.4E-32 253.0 20.5 307 110-446 6-341 (399)
11 3ihg_A RDME; flavoenzyme, anth 100.0 1.7E-26 5.8E-31 253.6 28.8 313 109-445 4-354 (535)
12 3e1t_A Halogenase; flavoprotei 99.9 5.8E-27 2E-31 256.2 22.9 319 110-447 7-352 (512)
13 1pn0_A Phenol 2-monooxygenase; 99.9 4.7E-26 1.6E-30 256.5 28.3 308 110-444 8-403 (665)
14 3i3l_A Alkylhalidase CMLS; fla 99.9 8.1E-27 2.8E-31 259.1 21.0 316 110-444 23-361 (591)
15 2vou_A 2,6-dihydroxypyridine h 99.9 2.1E-25 7.2E-30 235.5 25.1 304 110-446 5-350 (397)
16 3alj_A 2-methyl-3-hydroxypyrid 99.9 1.6E-26 5.4E-31 242.5 15.8 307 110-446 11-332 (379)
17 2dkh_A 3-hydroxybenzoate hydro 99.9 6.7E-25 2.3E-29 246.2 28.5 312 109-444 31-394 (639)
18 4hb9_A Similarities with proba 99.9 3.7E-25 1.3E-29 232.2 24.1 324 111-446 2-366 (412)
19 3c96_A Flavin-containing monoo 99.9 8.4E-25 2.9E-29 231.9 23.9 308 110-446 4-354 (410)
20 2r0c_A REBC; flavin adenine di 99.9 3.7E-24 1.3E-28 236.1 28.5 306 110-444 26-361 (549)
21 2xdo_A TETX2 protein; tetracyc 99.9 2E-24 6.7E-29 228.2 16.7 154 110-269 26-190 (398)
22 2gmh_A Electron transfer flavo 99.9 1.3E-22 4.5E-27 225.3 31.0 323 110-445 35-405 (584)
23 2pyx_A Tryptophan halogenase; 99.9 4.6E-23 1.6E-27 226.0 20.8 290 110-423 7-380 (526)
24 2weu_A Tryptophan 5-halogenase 99.9 7.2E-23 2.5E-27 223.3 22.2 299 110-444 2-387 (511)
25 2e4g_A Tryptophan halogenase; 99.9 4.2E-22 1.4E-26 219.6 24.3 299 110-443 25-409 (550)
26 2aqj_A Tryptophan halogenase, 99.9 7.1E-22 2.4E-26 217.1 22.9 285 110-422 5-364 (538)
27 3c4a_A Probable tryptophan hyd 99.8 2.7E-21 9.2E-26 203.0 12.2 293 111-447 1-314 (381)
28 3ihm_A Styrene monooxygenase A 99.8 2.8E-18 9.7E-23 183.3 14.8 299 109-444 21-357 (430)
29 2bry_A NEDD9 interacting prote 99.7 3.6E-16 1.2E-20 170.2 17.4 137 110-268 92-237 (497)
30 1yvv_A Amine oxidase, flavin-c 99.7 7.3E-15 2.5E-19 150.1 25.5 284 110-428 2-329 (336)
31 1ryi_A Glycine oxidase; flavop 99.5 3.7E-13 1.3E-17 140.0 20.6 70 200-270 159-229 (382)
32 2gag_B Heterotetrameric sarcos 99.5 6.1E-12 2.1E-16 131.7 23.9 71 200-271 169-241 (405)
33 1y56_B Sarcosine oxidase; dehy 99.4 3.3E-11 1.1E-15 125.4 26.4 70 200-270 144-215 (382)
34 2oln_A NIKD protein; flavoprot 99.4 6.6E-11 2.3E-15 123.9 26.9 68 201-269 149-217 (397)
35 2qcu_A Aerobic glycerol-3-phos 99.4 1.1E-10 3.9E-15 126.7 28.7 202 201-426 145-369 (501)
36 2gf3_A MSOX, monomeric sarcosi 99.3 9.5E-11 3.2E-15 121.9 22.7 67 201-268 146-213 (389)
37 3dme_A Conserved exported prot 99.3 4E-11 1.4E-15 123.2 17.4 71 200-270 145-220 (369)
38 3dje_A Fructosyl amine: oxygen 99.3 6.6E-11 2.2E-15 125.7 17.5 63 200-262 156-222 (438)
39 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.6E-11 5.5E-16 131.5 12.7 158 110-270 26-211 (447)
40 3v76_A Flavoprotein; structura 99.3 3.8E-11 1.3E-15 127.7 15.0 150 109-270 26-207 (417)
41 3pvc_A TRNA 5-methylaminomethy 99.3 1.6E-10 5.5E-15 130.5 20.7 63 200-262 407-470 (689)
42 3nlc_A Uncharacterized protein 99.2 8.6E-11 2.9E-15 129.0 16.9 60 203-262 218-278 (549)
43 3da1_A Glycerol-3-phosphate de 99.2 4E-09 1.4E-13 116.2 27.4 70 201-270 166-242 (561)
44 3nyc_A D-arginine dehydrogenas 99.2 2.2E-10 7.4E-15 118.5 14.7 70 200-270 149-219 (381)
45 3ps9_A TRNA 5-methylaminomethy 99.2 2.3E-10 7.8E-15 128.9 15.4 63 200-262 412-474 (676)
46 2uzz_A N-methyl-L-tryptophan o 99.1 3E-10 1E-14 117.5 14.6 62 200-262 144-205 (372)
47 2ywl_A Thioredoxin reductase r 99.1 4.9E-10 1.7E-14 104.3 14.0 117 110-269 1-118 (180)
48 3jsk_A Cypbp37 protein; octame 99.1 1.8E-10 6.2E-15 118.9 11.7 131 110-266 79-256 (344)
49 3c4n_A Uncharacterized protein 99.1 1.2E-10 4.1E-15 122.9 9.7 71 200-271 167-248 (405)
50 1rp0_A ARA6, thiazole biosynth 99.1 4.6E-10 1.6E-14 112.9 13.1 131 110-266 39-196 (284)
51 2gqf_A Hypothetical protein HI 99.1 6E-10 2E-14 117.8 14.2 156 110-270 4-188 (401)
52 3kkj_A Amine oxidase, flavin-c 99.0 7.6E-08 2.6E-12 91.7 25.0 36 110-145 2-38 (336)
53 4a9w_A Monooxygenase; baeyer-v 99.0 2.3E-09 8E-14 109.3 13.8 129 110-262 3-133 (357)
54 1qo8_A Flavocytochrome C3 fuma 99.0 1.9E-09 6.6E-14 118.8 14.1 155 109-265 120-316 (566)
55 2cul_A Glucose-inhibited divis 99.0 3.9E-09 1.3E-13 102.8 14.2 124 110-266 3-130 (232)
56 1pj5_A N,N-dimethylglycine oxi 99.0 5.6E-09 1.9E-13 120.3 17.0 70 200-270 146-217 (830)
57 2q0l_A TRXR, thioredoxin reduc 99.0 5E-09 1.7E-13 105.5 14.2 113 110-262 1-115 (311)
58 2rgh_A Alpha-glycerophosphate 99.0 2.5E-07 8.7E-12 102.1 28.9 68 201-268 184-258 (571)
59 2gjc_A Thiazole biosynthetic e 99.0 2.8E-09 9.7E-14 109.3 12.0 132 110-267 65-245 (326)
60 3cp8_A TRNA uridine 5-carboxym 99.0 3E-09 1E-13 118.1 13.0 145 109-262 20-175 (641)
61 1y0p_A Fumarate reductase flav 98.9 7.5E-09 2.5E-13 114.2 15.2 152 110-263 126-319 (571)
62 3ces_A MNMG, tRNA uridine 5-ca 98.9 6.3E-09 2.2E-13 115.6 14.1 144 110-261 28-181 (651)
63 3ab1_A Ferredoxin--NADP reduct 98.9 6.3E-09 2.1E-13 107.3 13.1 119 110-264 14-134 (360)
64 2zxi_A TRNA uridine 5-carboxym 98.9 9E-09 3.1E-13 114.0 14.0 145 110-262 27-181 (637)
65 2zbw_A Thioredoxin reductase; 98.9 1.1E-08 3.6E-13 104.2 13.6 118 110-263 5-123 (335)
66 3axb_A Putative oxidoreductase 98.9 5.4E-09 1.9E-13 111.3 11.7 70 200-270 176-264 (448)
67 2gv8_A Monooxygenase; FMO, FAD 98.9 1.6E-08 5.5E-13 108.0 13.8 145 110-262 6-178 (447)
68 1kf6_A Fumarate reductase flav 98.8 3.1E-08 1.1E-12 110.0 15.4 63 204-266 133-202 (602)
69 2q7v_A Thioredoxin reductase; 98.8 1.8E-08 6.1E-13 102.3 12.2 112 110-261 8-123 (325)
70 4at0_A 3-ketosteroid-delta4-5a 98.8 7.9E-09 2.7E-13 112.5 9.7 56 206-261 203-264 (510)
71 3i6d_A Protoporphyrinogen oxid 98.8 2E-07 6.8E-12 99.1 20.0 42 220-261 248-289 (470)
72 3cty_A Thioredoxin reductase; 98.8 3.5E-08 1.2E-12 99.8 12.9 110 110-261 16-126 (319)
73 3fbs_A Oxidoreductase; structu 98.8 5.8E-08 2E-12 96.5 14.0 109 110-261 2-112 (297)
74 3gwf_A Cyclohexanone monooxyge 98.8 4.5E-08 1.5E-12 107.4 14.3 133 110-261 8-147 (540)
75 3nrn_A Uncharacterized protein 98.8 5.7E-07 2E-11 94.7 22.4 55 206-262 190-244 (421)
76 3f8d_A Thioredoxin reductase ( 98.8 3.8E-08 1.3E-12 98.9 12.5 110 110-261 15-125 (323)
77 1vdc_A NTR, NADPH dependent th 98.8 1.5E-08 5.3E-13 102.9 9.3 117 110-262 8-125 (333)
78 1w4x_A Phenylacetone monooxyge 98.8 8.8E-08 3E-12 105.0 15.8 134 110-262 16-155 (542)
79 3itj_A Thioredoxin reductase 1 98.7 2.6E-08 9E-13 100.9 10.6 118 109-261 21-142 (338)
80 4ap3_A Steroid monooxygenase; 98.7 8.4E-08 2.9E-12 105.4 15.1 134 109-261 20-159 (549)
81 2a87_A TRXR, TR, thioredoxin r 98.7 5.8E-08 2E-12 99.1 12.6 111 110-261 14-126 (335)
82 1d4d_A Flavocytochrome C fumar 98.7 1.3E-07 4.5E-12 104.4 16.2 60 204-263 254-319 (572)
83 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 6.8E-08 2.3E-12 99.0 12.6 49 207-258 114-162 (342)
84 3lzw_A Ferredoxin--NADP reduct 98.7 8.9E-08 3E-12 96.7 13.3 115 110-261 7-123 (332)
85 1chu_A Protein (L-aspartate ox 98.7 3.2E-08 1.1E-12 108.5 10.7 59 205-263 138-210 (540)
86 2h88_A Succinate dehydrogenase 98.7 1.5E-07 5E-12 104.9 15.8 58 205-262 155-218 (621)
87 3d1c_A Flavin-containing putat 98.7 1.1E-07 3.7E-12 97.9 13.7 136 110-261 4-143 (369)
88 4fk1_A Putative thioredoxin re 98.7 1.6E-07 5.4E-12 94.7 13.1 109 110-260 6-116 (304)
89 1trb_A Thioredoxin reductase; 98.6 8.3E-08 2.9E-12 96.8 10.7 111 110-261 5-116 (320)
90 2e5v_A L-aspartate oxidase; ar 98.6 2.5E-07 8.5E-12 99.7 14.9 60 204-264 118-179 (472)
91 3uox_A Otemo; baeyer-villiger 98.6 2.1E-07 7.3E-12 102.1 14.5 134 110-262 9-148 (545)
92 1c0p_A D-amino acid oxidase; a 98.6 2.1E-08 7.1E-13 103.6 6.0 139 110-262 6-186 (363)
93 2bs2_A Quinol-fumarate reducta 98.6 3.1E-07 1.1E-11 103.0 15.7 58 205-262 158-221 (660)
94 1fl2_A Alkyl hydroperoxide red 98.6 1.2E-07 4E-12 95.3 11.1 111 110-261 1-115 (310)
95 3g3e_A D-amino-acid oxidase; F 98.6 1.6E-07 5.5E-12 96.5 12.2 51 200-262 137-187 (351)
96 2wdq_A Succinate dehydrogenase 98.6 4.4E-07 1.5E-11 100.5 16.2 59 205-263 143-208 (588)
97 3ka7_A Oxidoreductase; structu 98.6 3.5E-07 1.2E-11 96.2 14.3 57 205-262 196-253 (425)
98 2xve_A Flavin-containing monoo 98.6 2.3E-07 7.8E-12 99.7 12.0 145 111-262 3-167 (464)
99 4a5l_A Thioredoxin reductase; 98.5 5.5E-07 1.9E-11 90.4 12.3 115 110-260 4-120 (314)
100 3s5w_A L-ornithine 5-monooxyge 98.5 1.2E-07 3.9E-12 101.4 7.6 143 109-261 29-192 (463)
101 4dgk_A Phytoene dehydrogenase; 98.5 7.4E-07 2.5E-11 95.9 14.0 60 206-265 222-282 (501)
102 1jnr_A Adenylylsulfate reducta 98.5 7.8E-07 2.7E-11 99.6 14.4 153 110-262 22-219 (643)
103 1hyu_A AHPF, alkyl hydroperoxi 98.5 5.5E-07 1.9E-11 98.2 12.3 113 108-261 210-326 (521)
104 3k7m_X 6-hydroxy-L-nicotine ox 98.5 1E-06 3.5E-11 92.8 13.4 48 211-259 209-257 (431)
105 3gyx_A Adenylylsulfate reducta 98.4 9.3E-07 3.2E-11 99.1 11.8 58 205-262 166-234 (662)
106 3r9u_A Thioredoxin reductase; 98.4 2.2E-06 7.6E-11 85.6 12.9 109 110-260 4-117 (315)
107 4gcm_A TRXR, thioredoxin reduc 98.4 2.5E-06 8.5E-11 85.9 13.2 111 108-260 4-115 (312)
108 2a8x_A Dihydrolipoyl dehydroge 98.4 2.4E-07 8.1E-12 99.3 5.6 139 110-262 3-147 (464)
109 1dxl_A Dihydrolipoamide dehydr 98.3 5.2E-07 1.8E-11 96.7 6.9 141 110-262 6-152 (470)
110 2ivd_A PPO, PPOX, protoporphyr 98.3 2.4E-06 8.3E-11 91.3 11.9 43 219-261 249-294 (478)
111 2vvm_A Monoamine oxidase N; FA 98.3 5.5E-06 1.9E-10 89.1 14.1 56 206-261 256-312 (495)
112 1ojt_A Surface protein; redox- 98.3 4.2E-07 1.4E-11 98.0 5.3 141 110-262 6-161 (482)
113 1v59_A Dihydrolipoamide dehydr 98.3 4.9E-07 1.7E-11 97.2 5.7 140 110-261 5-157 (478)
114 1ebd_A E3BD, dihydrolipoamide 98.2 1.5E-06 5.1E-11 92.8 7.2 135 110-261 3-145 (455)
115 3nks_A Protoporphyrinogen oxid 98.2 3.5E-06 1.2E-10 89.9 9.5 54 206-260 235-289 (477)
116 2v3a_A Rubredoxin reductase; a 98.2 1.1E-05 3.9E-10 83.9 12.5 105 111-269 146-253 (384)
117 3lov_A Protoporphyrinogen oxid 98.1 1.2E-05 4.3E-10 85.7 12.9 41 220-261 249-289 (475)
118 1s3e_A Amine oxidase [flavin-c 98.1 1.8E-05 6E-10 85.9 13.9 43 219-261 226-268 (520)
119 1q1r_A Putidaredoxin reductase 98.1 3.1E-06 1.1E-10 89.9 7.1 108 110-261 4-114 (431)
120 1zmd_A Dihydrolipoyl dehydroge 98.1 2.9E-06 1E-10 91.1 5.9 141 110-261 6-152 (474)
121 3lad_A Dihydrolipoamide dehydr 98.0 3.6E-06 1.2E-10 90.4 5.9 34 110-143 3-37 (476)
122 4gut_A Lysine-specific histone 98.0 1.3E-05 4.5E-10 91.3 10.9 41 218-258 542-582 (776)
123 3qfa_A Thioredoxin reductase 1 98.0 4.3E-05 1.5E-09 83.1 13.6 34 109-142 31-65 (519)
124 2yg5_A Putrescine oxidase; oxi 98.0 5E-05 1.7E-09 80.4 13.9 42 218-260 225-267 (453)
125 3l8k_A Dihydrolipoyl dehydroge 98.0 1.8E-05 6E-10 84.8 10.3 132 110-259 4-142 (466)
126 3urh_A Dihydrolipoyl dehydroge 98.0 1.1E-05 3.8E-10 87.0 8.6 138 110-260 25-169 (491)
127 2qae_A Lipoamide, dihydrolipoy 98.0 1.1E-05 3.9E-10 86.3 8.7 139 110-261 2-148 (468)
128 2yqu_A 2-oxoglutarate dehydrog 98.0 4.4E-05 1.5E-09 81.3 12.7 98 111-263 168-266 (455)
129 2cdu_A NADPH oxidase; flavoenz 98.0 7.1E-06 2.4E-10 87.5 6.5 111 111-261 1-117 (452)
130 2eq6_A Pyruvate dehydrogenase 97.9 5.4E-05 1.8E-09 81.0 12.8 98 111-263 170-273 (464)
131 3cgb_A Pyridine nucleotide-dis 97.9 1.3E-05 4.5E-10 86.2 7.2 110 110-261 36-152 (480)
132 3sx6_A Sulfide-quinone reducta 97.9 1E-05 3.5E-10 85.9 6.0 106 110-262 4-113 (437)
133 3lxd_A FAD-dependent pyridine 97.9 1.8E-05 6.2E-10 83.3 7.6 107 110-260 9-118 (415)
134 2bc0_A NADH oxidase; flavoprot 97.9 6.7E-06 2.3E-10 88.8 4.0 110 110-261 35-149 (490)
135 2hqm_A GR, grase, glutathione 97.8 2.4E-05 8.3E-10 84.1 8.1 137 110-260 11-159 (479)
136 1ges_A Glutathione reductase; 97.8 8.9E-05 3E-09 79.0 12.3 97 112-263 169-267 (450)
137 3kd9_A Coenzyme A disulfide re 97.8 4.1E-05 1.4E-09 81.4 9.5 106 110-260 3-113 (449)
138 3o0h_A Glutathione reductase; 97.8 2.9E-05 1E-09 83.5 8.4 37 109-145 25-62 (484)
139 2yqu_A 2-oxoglutarate dehydrog 97.8 8.4E-06 2.9E-10 87.0 4.0 138 110-261 1-141 (455)
140 3dgz_A Thioredoxin reductase 2 97.8 9.2E-05 3.1E-09 79.7 12.1 34 109-142 5-39 (488)
141 1nhp_A NADH peroxidase; oxidor 97.8 2E-05 6.8E-10 83.8 6.8 108 111-260 1-114 (447)
142 4dna_A Probable glutathione re 97.8 2.4E-05 8.1E-10 83.7 7.1 35 110-144 5-40 (463)
143 3dgh_A TRXR-1, thioredoxin red 97.8 8.5E-05 2.9E-09 79.8 11.4 33 109-141 8-41 (483)
144 1xdi_A RV3303C-LPDA; reductase 97.8 3.5E-05 1.2E-09 83.3 8.3 142 110-261 2-156 (499)
145 4b63_A L-ornithine N5 monooxyg 97.8 8.2E-05 2.8E-09 80.6 11.1 58 202-259 142-212 (501)
146 3oc4_A Oxidoreductase, pyridin 97.8 2.4E-05 8.4E-10 83.3 6.8 108 111-260 3-114 (452)
147 1zk7_A HGII, reductase, mercur 97.8 6.5E-05 2.2E-09 80.3 9.7 35 110-144 4-39 (467)
148 3dk9_A Grase, GR, glutathione 97.7 3.3E-05 1.1E-09 82.8 7.3 36 110-145 20-56 (478)
149 3fg2_P Putative rubredoxin red 97.7 0.00038 1.3E-08 72.9 14.7 105 112-270 144-252 (404)
150 3klj_A NAD(FAD)-dependent dehy 97.7 3.2E-05 1.1E-09 80.9 6.5 105 110-259 9-114 (385)
151 2eq6_A Pyruvate dehydrogenase 97.7 4.9E-05 1.7E-09 81.4 7.9 35 110-144 6-41 (464)
152 3fg2_P Putative rubredoxin red 97.7 4.4E-05 1.5E-09 80.1 7.4 105 111-260 2-109 (404)
153 2r9z_A Glutathione amide reduc 97.7 0.0002 6.7E-09 76.7 12.4 97 112-263 168-266 (463)
154 3h28_A Sulfide-quinone reducta 97.7 1.1E-05 3.8E-10 85.4 2.5 105 110-261 2-109 (430)
155 3ics_A Coenzyme A-disulfide re 97.7 5.1E-05 1.7E-09 83.6 7.8 110 110-260 36-151 (588)
156 1xhc_A NADH oxidase /nitrite r 97.7 2.9E-05 1E-09 80.6 5.4 103 111-260 9-112 (367)
157 3h8l_A NADH oxidase; membrane 97.7 2.6E-05 8.7E-10 81.8 5.0 104 111-261 2-113 (409)
158 3k30_A Histamine dehydrogenase 97.6 0.00024 8.1E-09 80.0 12.7 51 208-260 570-623 (690)
159 1y56_A Hypothetical protein PH 97.6 6.3E-05 2.1E-09 81.3 7.5 107 110-260 108-218 (493)
160 1ebd_A E3BD, dihydrolipoamide 97.6 0.00026 8.9E-09 75.3 12.1 97 111-262 171-271 (455)
161 2bcg_G Secretory pathway GDP d 97.6 3.9E-05 1.3E-09 81.9 5.6 56 206-262 243-301 (453)
162 3o0h_A Glutathione reductase; 97.6 0.00026 9E-09 76.0 12.1 97 111-262 192-289 (484)
163 3lxd_A FAD-dependent pyridine 97.6 0.00038 1.3E-08 73.1 12.9 105 112-270 154-262 (415)
164 3iwa_A FAD-dependent pyridine 97.6 0.0001 3.5E-09 78.9 8.6 116 110-260 3-124 (472)
165 1v59_A Dihydrolipoamide dehydr 97.6 0.00033 1.1E-08 75.0 12.6 98 111-263 184-289 (478)
166 1fec_A Trypanothione reductase 97.6 0.00011 3.7E-09 79.3 8.7 31 110-140 3-35 (490)
167 1onf_A GR, grase, glutathione 97.6 4.5E-05 1.5E-09 82.5 5.6 34 110-143 2-36 (500)
168 3iwa_A FAD-dependent pyridine 97.6 0.00056 1.9E-08 73.1 13.6 106 111-270 160-269 (472)
169 1mo9_A ORF3; nucleotide bindin 97.6 0.00028 9.7E-09 76.7 11.4 34 110-143 43-77 (523)
170 3fpz_A Thiazole biosynthetic e 97.6 4.3E-05 1.5E-09 77.7 4.5 43 385-427 281-325 (326)
171 2gqw_A Ferredoxin reductase; f 97.6 0.00022 7.5E-09 74.9 10.0 104 110-261 7-113 (408)
172 3ef6_A Toluene 1,2-dioxygenase 97.5 6.7E-05 2.3E-09 78.9 5.8 105 111-260 3-110 (410)
173 1nhp_A NADH peroxidase; oxidor 97.5 0.00032 1.1E-08 74.4 11.0 97 110-262 149-247 (447)
174 4gde_A UDP-galactopyranose mut 97.5 4.3E-05 1.5E-09 82.0 4.0 51 206-258 223-273 (513)
175 2r9z_A Glutathione amide reduc 97.5 0.00026 8.8E-09 75.7 10.0 34 110-143 4-38 (463)
176 4b1b_A TRXR, thioredoxin reduc 97.5 0.0002 7E-09 78.3 9.2 35 109-143 41-76 (542)
177 2v3a_A Rubredoxin reductase; a 97.5 0.00018 6.1E-09 74.8 8.3 106 110-261 4-113 (384)
178 1mo9_A ORF3; nucleotide bindin 97.5 0.00047 1.6E-08 74.9 11.6 105 111-270 215-328 (523)
179 3ef6_A Toluene 1,2-dioxygenase 97.5 0.00033 1.1E-08 73.6 9.9 106 111-270 144-252 (410)
180 1q1r_A Putidaredoxin reductase 97.4 0.00081 2.8E-08 71.2 12.8 105 112-270 151-261 (431)
181 2hqm_A GR, grase, glutathione 97.4 0.00051 1.7E-08 73.7 11.2 97 112-263 187-287 (479)
182 1xdi_A RV3303C-LPDA; reductase 97.4 0.00067 2.3E-08 73.1 11.9 97 112-263 184-281 (499)
183 2gqw_A Ferredoxin reductase; f 97.4 0.0011 3.7E-08 69.6 13.2 102 111-270 146-250 (408)
184 2qae_A Lipoamide, dihydrolipoy 97.4 0.00068 2.3E-08 72.3 11.7 96 112-262 176-277 (468)
185 2x8g_A Thioredoxin glutathione 97.4 0.0014 4.8E-08 72.2 14.4 34 108-141 105-139 (598)
186 1zmd_A Dihydrolipoyl dehydroge 97.4 0.00096 3.3E-08 71.3 12.4 104 112-269 180-294 (474)
187 1lvl_A Dihydrolipoamide dehydr 97.4 0.0006 2.1E-08 72.7 10.6 35 110-144 5-40 (458)
188 3ntd_A FAD-dependent pyridine 97.4 0.00017 5.7E-09 78.9 6.3 109 111-260 2-116 (565)
189 1onf_A GR, grase, glutathione 97.3 0.0013 4.5E-08 70.9 13.0 97 112-263 178-277 (500)
190 1ojt_A Surface protein; redox- 97.3 0.00084 2.9E-08 72.0 11.2 97 112-263 187-288 (482)
191 1fec_A Trypanothione reductase 97.3 0.001 3.4E-08 71.7 11.7 97 112-263 189-290 (490)
192 3t37_A Probable dehydrogenase; 97.3 0.00014 4.9E-09 78.6 5.0 35 109-143 16-52 (526)
193 2wpf_A Trypanothione reductase 97.3 0.00018 6.1E-09 77.7 5.7 31 110-140 7-39 (495)
194 1m6i_A Programmed cell death p 97.3 0.00029 1E-08 76.0 7.4 43 217-261 102-144 (493)
195 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00017 5.6E-09 77.6 5.3 55 206-260 257-313 (475)
196 3urh_A Dihydrolipoyl dehydroge 97.3 0.0017 5.7E-08 69.8 13.2 96 112-262 200-301 (491)
197 3ntd_A FAD-dependent pyridine 97.3 0.0016 5.3E-08 71.1 13.1 104 112-270 153-278 (565)
198 3oc4_A Oxidoreductase, pyridin 97.3 0.0016 5.5E-08 69.1 12.7 95 112-261 149-244 (452)
199 2gag_A Heterotetrameric sarcos 97.3 0.00064 2.2E-08 79.4 10.1 36 110-145 128-164 (965)
200 2cdu_A NADPH oxidase; flavoenz 97.3 0.0026 9.1E-08 67.4 14.2 97 112-262 151-248 (452)
201 1zk7_A HGII, reductase, mercur 97.3 0.0018 6.3E-08 69.0 12.9 95 112-263 178-273 (467)
202 1dxl_A Dihydrolipoamide dehydr 97.2 0.00073 2.5E-08 72.0 9.6 97 111-262 178-280 (470)
203 3cgb_A Pyridine nucleotide-dis 97.2 0.0021 7.3E-08 68.8 13.2 95 111-262 187-283 (480)
204 2a8x_A Dihydrolipoyl dehydroge 97.2 0.0022 7.4E-08 68.3 13.2 96 112-262 173-272 (464)
205 1trb_A Thioredoxin reductase; 97.2 0.0023 7.9E-08 63.8 12.6 92 112-260 147-246 (320)
206 2wpf_A Trypanothione reductase 97.2 0.0023 7.8E-08 69.0 12.9 97 112-263 193-294 (495)
207 1lvl_A Dihydrolipoamide dehydr 97.2 0.0011 3.7E-08 70.7 10.0 94 112-262 173-269 (458)
208 1m6i_A Programmed cell death p 97.2 0.0026 9E-08 68.5 12.9 105 112-270 182-293 (493)
209 3ic9_A Dihydrolipoamide dehydr 97.1 0.0029 1E-07 68.0 13.0 95 112-262 176-275 (492)
210 3hdq_A UDP-galactopyranose mut 97.1 0.00039 1.3E-08 73.1 5.7 36 109-144 28-64 (397)
211 1v0j_A UDP-galactopyranose mut 97.1 0.00032 1.1E-08 73.6 5.0 35 110-144 7-43 (399)
212 1kdg_A CDH, cellobiose dehydro 97.1 0.00032 1.1E-08 76.5 5.2 35 109-143 6-41 (546)
213 2jae_A L-amino acid oxidase; o 97.1 0.00042 1.4E-08 74.1 5.7 52 207-260 241-295 (489)
214 2b9w_A Putative aminooxidase; 97.1 0.00042 1.4E-08 72.6 5.5 42 218-260 216-257 (424)
215 4b1b_A TRXR, thioredoxin reduc 97.1 0.004 1.4E-07 68.1 13.3 96 112-263 225-321 (542)
216 1i8t_A UDP-galactopyranose mut 97.1 0.00035 1.2E-08 72.4 4.7 35 110-144 1-36 (367)
217 1d5t_A Guanine nucleotide diss 97.1 0.00046 1.6E-08 73.1 5.5 57 206-262 235-291 (433)
218 3ic9_A Dihydrolipoamide dehydr 97.0 0.00036 1.2E-08 75.2 4.7 36 110-145 8-44 (492)
219 3lad_A Dihydrolipoamide dehydr 97.0 0.0031 1.1E-07 67.3 11.9 96 112-262 182-281 (476)
220 2bc0_A NADH oxidase; flavoprot 97.0 0.003 1E-07 67.9 11.7 96 111-262 195-292 (490)
221 1sez_A Protoporphyrinogen oxid 97.0 0.0005 1.7E-08 73.8 5.1 57 110-166 13-86 (504)
222 1xhc_A NADH oxidase /nitrite r 97.0 0.0024 8.3E-08 66.0 9.9 97 112-269 145-244 (367)
223 1rsg_A FMS1 protein; FAD bindi 96.9 0.00052 1.8E-08 74.2 4.7 41 220-260 215-256 (516)
224 4dna_A Probable glutathione re 96.9 0.0037 1.3E-07 66.6 11.3 96 111-262 171-269 (463)
225 3d1c_A Flavin-containing putat 96.9 0.0047 1.6E-07 62.8 11.6 102 112-261 168-272 (369)
226 3dgh_A TRXR-1, thioredoxin red 96.9 0.0052 1.8E-07 65.7 12.3 94 112-261 189-289 (483)
227 2e1m_A L-glutamate oxidase; L- 96.9 0.00074 2.5E-08 70.4 5.4 35 110-144 44-80 (376)
228 3g5s_A Methylenetetrahydrofola 96.9 0.00084 2.9E-08 70.2 5.5 33 111-143 2-35 (443)
229 3pl8_A Pyranose 2-oxidase; sub 96.9 0.00068 2.3E-08 75.4 5.1 36 110-145 46-82 (623)
230 1ju2_A HydroxynitrIle lyase; f 96.9 0.00046 1.6E-08 75.3 3.7 35 109-144 25-60 (536)
231 3q9t_A Choline dehydrogenase a 96.9 0.00066 2.3E-08 74.8 4.9 35 109-143 5-41 (577)
232 3itj_A Thioredoxin reductase 1 96.9 0.0036 1.2E-07 62.7 9.9 89 111-260 174-270 (338)
233 3hyw_A Sulfide-quinone reducta 96.9 0.0012 4E-08 69.9 6.5 102 112-260 4-108 (430)
234 3s5w_A L-ornithine 5-monooxyge 96.8 0.013 4.5E-07 61.9 14.1 131 111-260 228-376 (463)
235 3qvp_A Glucose oxidase; oxidor 96.8 0.00075 2.6E-08 74.4 4.6 34 109-142 18-53 (583)
236 2q0l_A TRXR, thioredoxin reduc 96.7 0.013 4.4E-07 58.1 12.9 89 111-260 144-240 (311)
237 3vrd_B FCCB subunit, flavocyto 96.7 0.004 1.4E-07 64.6 9.4 42 217-261 67-108 (401)
238 1ges_A Glutathione reductase; 96.7 0.00086 3E-08 71.3 4.1 34 110-143 4-38 (450)
239 3dk9_A Grase, GR, glutathione 96.7 0.012 3.9E-07 62.9 12.9 96 112-262 189-294 (478)
240 3ics_A Coenzyme A-disulfide re 96.7 0.0069 2.4E-07 66.5 11.4 101 112-269 189-292 (588)
241 2iid_A L-amino-acid oxidase; f 96.7 0.0011 3.8E-08 71.0 4.8 40 221-260 254-297 (498)
242 3ab1_A Ferredoxin--NADP reduct 96.7 0.0054 1.8E-07 62.5 9.7 93 112-261 165-263 (360)
243 2bi7_A UDP-galactopyranose mut 96.6 0.0014 4.8E-08 68.3 5.1 35 110-144 3-38 (384)
244 4eqs_A Coenzyme A disulfide re 96.6 0.0065 2.2E-07 64.3 10.1 108 113-261 3-116 (437)
245 3kd9_A Coenzyme A disulfide re 96.6 0.012 4.2E-07 62.2 12.2 103 112-270 150-255 (449)
246 2zbw_A Thioredoxin reductase; 96.6 0.017 6E-07 57.8 12.6 93 112-261 154-252 (335)
247 3fim_B ARYL-alcohol oxidase; A 96.5 0.00096 3.3E-08 73.3 3.2 35 110-144 2-38 (566)
248 1vg0_A RAB proteins geranylger 96.5 0.0021 7E-08 71.5 5.9 52 207-258 380-434 (650)
249 3dgz_A Thioredoxin reductase 2 96.5 0.016 5.4E-07 62.1 12.7 95 112-262 187-288 (488)
250 4dsg_A UDP-galactopyranose mut 96.5 0.002 6.9E-08 69.2 5.5 35 110-144 9-45 (484)
251 3r9u_A Thioredoxin reductase; 96.4 0.023 7.9E-07 56.0 12.1 89 112-260 149-243 (315)
252 1b37_A Protein (polyamine oxid 96.4 0.0024 8.1E-08 68.1 5.0 55 206-260 207-269 (472)
253 3cty_A Thioredoxin reductase; 96.3 0.022 7.4E-07 56.8 11.7 88 112-260 157-251 (319)
254 1n4w_A CHOD, cholesterol oxida 96.3 0.0025 8.7E-08 68.8 4.6 33 110-142 5-38 (504)
255 1coy_A Cholesterol oxidase; ox 96.3 0.0029 9.9E-08 68.4 5.0 34 109-142 10-44 (507)
256 1fl2_A Alkyl hydroperoxide red 96.3 0.02 7E-07 56.6 10.9 87 112-259 146-240 (310)
257 2jbv_A Choline oxidase; alcoho 96.2 0.0029 9.9E-08 69.1 4.7 36 109-144 12-49 (546)
258 2vdc_G Glutamate synthase [NAD 96.2 0.0036 1.2E-07 66.8 5.3 35 110-144 122-157 (456)
259 4eqs_A Coenzyme A disulfide re 96.2 0.01 3.6E-07 62.7 8.8 91 112-261 149-240 (437)
260 3l8k_A Dihydrolipoyl dehydroge 96.2 0.029 1E-06 59.6 12.3 94 112-262 174-273 (466)
261 1ps9_A 2,4-dienoyl-COA reducta 96.1 0.0041 1.4E-07 69.6 5.5 38 108-145 371-409 (671)
262 1gpe_A Protein (glucose oxidas 96.1 0.0035 1.2E-07 69.1 4.8 36 109-144 23-60 (587)
263 1o94_A Tmadh, trimethylamine d 96.1 0.0043 1.5E-07 70.2 5.7 37 108-144 387-424 (729)
264 2q7v_A Thioredoxin reductase; 96.1 0.04 1.4E-06 55.0 12.2 88 112-260 154-248 (325)
265 3qfa_A Thioredoxin reductase 1 96.0 0.06 2.1E-06 58.1 13.8 94 112-261 212-315 (519)
266 3f8d_A Thioredoxin reductase ( 96.0 0.037 1.3E-06 54.6 11.0 90 111-261 155-251 (323)
267 3lzw_A Ferredoxin--NADP reduct 96.0 0.018 6E-07 57.4 8.6 88 112-260 156-249 (332)
268 4g6h_A Rotenone-insensitive NA 95.9 0.0093 3.2E-07 64.4 6.9 34 110-143 42-76 (502)
269 2z3y_A Lysine-specific histone 95.9 0.0061 2.1E-07 68.1 5.5 40 219-258 410-455 (662)
270 2x8g_A Thioredoxin glutathione 95.9 0.081 2.8E-06 58.0 14.5 95 112-262 288-396 (598)
271 3fbs_A Oxidoreductase; structu 95.8 0.012 4.3E-07 57.5 6.9 83 111-260 142-225 (297)
272 1vdc_A NTR, NADPH dependent th 95.8 0.03 1E-06 56.0 9.8 88 112-260 161-258 (333)
273 2xag_A Lysine-specific histone 95.7 0.0093 3.2E-07 68.5 5.8 40 219-258 581-626 (852)
274 3gwf_A Cyclohexanone monooxyge 95.6 0.057 1.9E-06 58.8 11.6 32 112-143 180-212 (540)
275 2a87_A TRXR, TR, thioredoxin r 95.2 0.055 1.9E-06 54.3 9.2 90 111-260 156-251 (335)
276 4g6h_A Rotenone-insensitive NA 95.2 0.058 2E-06 58.1 9.7 53 206-260 273-331 (502)
277 1cjc_A Protein (adrenodoxin re 95.2 0.013 4.5E-07 62.5 4.6 36 110-145 6-44 (460)
278 3uox_A Otemo; baeyer-villiger 95.1 0.012 4.1E-07 64.2 4.3 32 112-143 187-219 (545)
279 3klj_A NAD(FAD)-dependent dehy 95.1 0.013 4.3E-07 61.1 4.1 83 112-261 148-231 (385)
280 1gte_A Dihydropyrimidine dehyd 95.1 0.015 5.2E-07 68.2 5.1 35 110-144 187-223 (1025)
281 1cjc_A Protein (adrenodoxin re 95.1 0.14 4.9E-06 54.4 12.2 132 111-261 146-333 (460)
282 1lqt_A FPRA; NADP+ derivative, 94.8 0.018 6.1E-07 61.4 4.2 35 110-144 3-45 (456)
283 4ap3_A Steroid monooxygenase; 94.3 0.076 2.6E-06 57.9 8.0 32 112-143 193-225 (549)
284 1hyu_A AHPF, alkyl hydroperoxi 94.3 0.17 5.6E-06 54.7 10.5 87 112-259 357-451 (521)
285 1lqt_A FPRA; NADP+ derivative, 93.8 0.12 4E-06 55.0 8.0 131 111-261 148-326 (456)
286 3ayj_A Pro-enzyme of L-phenyla 93.3 0.038 1.3E-06 62.1 3.3 33 110-142 56-97 (721)
287 1ps9_A 2,4-dienoyl-COA reducta 93.3 0.42 1.4E-05 53.2 11.8 50 209-261 577-628 (671)
288 3h8l_A NADH oxidase; membrane 92.7 0.46 1.6E-05 49.1 10.3 50 207-260 220-269 (409)
289 2gv8_A Monooxygenase; FMO, FAD 92.3 0.15 5.2E-06 53.6 6.1 31 112-142 214-246 (447)
290 1o94_A Tmadh, trimethylamine d 92.2 0.47 1.6E-05 53.4 10.4 31 112-142 530-563 (729)
291 2gag_A Heterotetrameric sarcos 92.0 0.32 1.1E-05 56.7 8.8 93 112-268 286-392 (965)
292 3fwz_A Inner membrane protein 92.0 0.17 5.9E-06 44.3 5.1 32 111-142 8-40 (140)
293 1gte_A Dihydropyrimidine dehyd 91.6 0.89 3.1E-05 53.2 12.1 31 112-142 334-366 (1025)
294 2g1u_A Hypothetical protein TM 91.3 0.18 6.1E-06 44.9 4.6 32 111-142 20-52 (155)
295 2xve_A Flavin-containing monoo 91.0 0.48 1.6E-05 50.2 8.3 31 112-142 199-230 (464)
296 3llv_A Exopolyphosphatase-rela 90.8 0.19 6.6E-06 43.7 4.2 31 112-142 8-39 (141)
297 1d5t_A Guanine nucleotide diss 90.4 0.28 9.5E-06 51.5 5.7 36 110-145 6-42 (433)
298 3p1w_A Rabgdi protein; GDI RAB 90.0 0.4 1.4E-05 51.3 6.6 37 109-145 19-56 (475)
299 1lss_A TRK system potassium up 90.0 0.25 8.6E-06 42.3 4.2 32 111-142 5-37 (140)
300 1b37_A Protein (polyamine oxid 89.9 0.32 1.1E-05 51.4 5.7 35 110-144 4-40 (472)
301 3sx6_A Sulfide-quinone reducta 89.5 1.6 5.4E-05 45.6 10.7 49 209-259 212-267 (437)
302 4a9w_A Monooxygenase; baeyer-v 89.0 0.27 9.2E-06 49.0 4.1 31 111-142 164-195 (357)
303 2bcg_G Secretory pathway GDP d 88.7 0.6 2.1E-05 49.2 6.8 37 109-145 10-47 (453)
304 1jw9_B Molybdopterin biosynthe 88.4 0.32 1.1E-05 47.3 4.0 33 111-143 32-66 (249)
305 3ic5_A Putative saccharopine d 88.4 0.33 1.1E-05 40.2 3.6 32 111-142 6-39 (118)
306 2hmt_A YUAA protein; RCK, KTN, 88.0 0.4 1.4E-05 41.1 4.1 31 112-142 8-39 (144)
307 1id1_A Putative potassium chan 87.9 0.51 1.7E-05 41.7 4.7 31 112-142 5-36 (153)
308 3l4b_C TRKA K+ channel protien 87.2 0.45 1.5E-05 44.8 4.2 31 112-142 2-33 (218)
309 3c85_A Putative glutathione-re 87.0 0.38 1.3E-05 43.9 3.4 31 112-142 41-73 (183)
310 4gcm_A TRXR, thioredoxin reduc 86.7 0.47 1.6E-05 46.8 4.2 32 112-143 147-179 (312)
311 3ado_A Lambda-crystallin; L-gu 86.6 0.49 1.7E-05 47.8 4.3 31 112-142 8-39 (319)
312 1f0y_A HCDH, L-3-hydroxyacyl-C 86.2 0.61 2.1E-05 46.3 4.7 31 112-142 17-48 (302)
313 3eag_A UDP-N-acetylmuramate:L- 85.9 1.1 3.7E-05 45.2 6.5 32 112-143 6-39 (326)
314 3i83_A 2-dehydropantoate 2-red 85.8 0.67 2.3E-05 46.5 4.8 31 112-142 4-35 (320)
315 4a5l_A Thioredoxin reductase; 85.7 0.64 2.2E-05 45.6 4.6 33 111-143 153-186 (314)
316 3fwy_A Light-independent proto 85.7 0.41 1.4E-05 48.2 3.2 31 113-143 51-87 (314)
317 4e12_A Diketoreductase; oxidor 85.4 0.62 2.1E-05 45.9 4.3 31 112-142 6-37 (283)
318 3hn2_A 2-dehydropantoate 2-red 84.4 0.76 2.6E-05 45.9 4.4 31 112-142 4-35 (312)
319 3ged_A Short-chain dehydrogena 83.8 0.92 3.1E-05 44.0 4.6 30 113-142 5-36 (247)
320 1ks9_A KPA reductase;, 2-dehyd 83.8 0.97 3.3E-05 44.0 4.9 30 113-142 3-33 (291)
321 1zud_1 Adenylyltransferase THI 83.7 0.9 3.1E-05 44.1 4.5 32 111-142 29-62 (251)
322 3h7a_A Short chain dehydrogena 83.4 0.96 3.3E-05 43.5 4.6 30 113-142 10-41 (252)
323 3guy_A Short-chain dehydrogena 83.2 1 3.5E-05 42.4 4.6 30 113-142 4-35 (230)
324 2dpo_A L-gulonate 3-dehydrogen 83.1 0.87 3E-05 45.9 4.3 31 112-142 8-39 (319)
325 3l6e_A Oxidoreductase, short-c 82.7 1.1 3.8E-05 42.6 4.6 30 113-142 6-37 (235)
326 3pxx_A Carveol dehydrogenase; 82.5 2.6 8.8E-05 40.9 7.4 32 113-144 13-46 (287)
327 3ghy_A Ketopantoate reductase 82.4 1.1 3.6E-05 45.3 4.6 30 112-141 5-35 (335)
328 2raf_A Putative dinucleotide-b 82.1 1.3 4.5E-05 41.5 4.8 32 111-142 20-52 (209)
329 3tpc_A Short chain alcohol deh 82.0 1.2 4.2E-05 42.6 4.8 31 113-143 10-42 (257)
330 4b79_A PA4098, probable short- 82.0 1.3 4.3E-05 43.0 4.7 31 113-143 14-46 (242)
331 3orf_A Dihydropteridine reduct 81.9 1.3 4.3E-05 42.5 4.7 32 113-144 25-58 (251)
332 3g17_A Similar to 2-dehydropan 81.8 0.84 2.9E-05 45.2 3.5 31 112-142 4-35 (294)
333 3f1l_A Uncharacterized oxidore 81.6 1.2 4.3E-05 42.6 4.6 30 113-142 15-46 (252)
334 3t7c_A Carveol dehydrogenase; 81.6 2.9 9.8E-05 41.2 7.4 31 113-143 31-63 (299)
335 2y0c_A BCEC, UDP-glucose dehyd 81.5 1.1 3.8E-05 47.8 4.5 33 110-142 8-41 (478)
336 3dii_A Short-chain dehydrogena 81.4 1.3 4.4E-05 42.3 4.6 30 113-142 5-36 (247)
337 2ew2_A 2-dehydropantoate 2-red 81.3 1.3 4.4E-05 43.6 4.7 31 112-142 5-36 (316)
338 3ppi_A 3-hydroxyacyl-COA dehyd 81.3 1.3 4.3E-05 43.1 4.6 30 113-142 33-64 (281)
339 4fc7_A Peroxisomal 2,4-dienoyl 81.3 2.1 7.2E-05 41.6 6.2 30 113-142 30-61 (277)
340 3tzq_B Short-chain type dehydr 81.2 1.3 4.6E-05 42.9 4.7 31 113-143 14-46 (271)
341 4g65_A TRK system potassium up 81.1 0.58 2E-05 49.7 2.2 32 111-142 4-36 (461)
342 1dhr_A Dihydropteridine reduct 81.0 1.4 4.7E-05 41.9 4.6 31 113-143 10-42 (241)
343 3rwb_A TPLDH, pyridoxal 4-dehy 80.6 1.5 5E-05 42.0 4.7 30 113-142 9-40 (247)
344 3n74_A 3-ketoacyl-(acyl-carrie 80.6 1.4 4.8E-05 42.2 4.6 30 113-142 12-43 (261)
345 3qiv_A Short-chain dehydrogena 80.5 1.4 4.9E-05 41.9 4.6 30 113-142 12-43 (253)
346 4eso_A Putative oxidoreductase 80.5 1.4 4.9E-05 42.3 4.6 30 113-142 11-42 (255)
347 3e03_A Short chain dehydrogena 80.5 1.5 5E-05 42.7 4.7 32 113-144 9-42 (274)
348 1fjh_A 3alpha-hydroxysteroid d 80.4 1.5 5.2E-05 41.7 4.8 31 113-143 4-36 (257)
349 3l77_A Short-chain alcohol deh 80.4 1.5 5.1E-05 41.3 4.6 30 113-142 5-36 (235)
350 4fgs_A Probable dehydrogenase 80.4 1.4 4.9E-05 43.3 4.6 30 113-142 32-63 (273)
351 3nyw_A Putative oxidoreductase 80.3 1.2 4E-05 42.8 3.9 30 113-142 10-41 (250)
352 3sx2_A Putative 3-ketoacyl-(ac 80.3 1.5 5E-05 42.6 4.6 31 113-143 16-48 (278)
353 1ooe_A Dihydropteridine reduct 80.2 1.3 4.6E-05 41.8 4.2 31 113-143 6-38 (236)
354 4h15_A Short chain alcohol deh 80.2 1.2 4.2E-05 43.4 4.1 31 113-143 14-46 (261)
355 3gem_A Short chain dehydrogena 80.1 1.2 4.2E-05 43.1 4.0 30 113-142 30-61 (260)
356 1nyt_A Shikimate 5-dehydrogena 80.1 1.5 5.3E-05 42.8 4.7 31 112-142 121-152 (271)
357 2ekp_A 2-deoxy-D-gluconate 3-d 80.1 1.6 5.5E-05 41.3 4.7 30 113-142 5-36 (239)
358 3vtz_A Glucose 1-dehydrogenase 80.0 1.2 4.1E-05 43.3 3.9 32 113-144 17-50 (269)
359 1lld_A L-lactate dehydrogenase 80.0 1.5 5.2E-05 43.6 4.7 32 111-142 8-42 (319)
360 3uve_A Carveol dehydrogenase ( 80.0 1.5 5.1E-05 42.8 4.6 31 113-143 14-46 (286)
361 3r1i_A Short-chain type dehydr 79.9 1.5 5.1E-05 42.8 4.6 30 113-142 35-66 (276)
362 4dqx_A Probable oxidoreductase 79.9 1.5 5.2E-05 42.8 4.6 30 113-142 30-61 (277)
363 3h8v_A Ubiquitin-like modifier 79.8 1.3 4.6E-05 44.1 4.2 33 111-143 37-71 (292)
364 2ew8_A (S)-1-phenylethanol deh 79.8 1.6 5.6E-05 41.6 4.7 30 113-142 10-41 (249)
365 3sju_A Keto reductase; short-c 79.7 1.5 5.3E-05 42.7 4.6 30 113-142 27-58 (279)
366 1zej_A HBD-9, 3-hydroxyacyl-CO 79.7 1.3 4.5E-05 44.1 4.1 31 111-142 13-44 (293)
367 3zv4_A CIS-2,3-dihydrobiphenyl 79.7 1.5 5.3E-05 42.8 4.6 30 113-142 8-39 (281)
368 3tsc_A Putative oxidoreductase 79.6 1.5 5.1E-05 42.6 4.5 30 113-142 14-45 (277)
369 3i1j_A Oxidoreductase, short c 79.6 1.2 4.2E-05 42.1 3.8 30 113-142 17-48 (247)
370 3lf2_A Short chain oxidoreduct 79.6 1.6 5.4E-05 42.2 4.6 30 113-142 11-42 (265)
371 3k6j_A Protein F01G10.3, confi 79.5 1.3 4.5E-05 47.0 4.2 54 111-168 55-109 (460)
372 3s55_A Putative short-chain de 79.5 1.6 5.4E-05 42.5 4.6 31 113-143 13-45 (281)
373 3rd5_A Mypaa.01249.C; ssgcid, 79.4 1.6 5.4E-05 42.8 4.6 30 113-142 19-50 (291)
374 4a7p_A UDP-glucose dehydrogena 79.4 1.7 5.9E-05 45.9 5.1 34 110-143 8-42 (446)
375 4imr_A 3-oxoacyl-(acyl-carrier 79.4 1.2 4.2E-05 43.4 3.8 31 113-143 36-68 (275)
376 3v8b_A Putative dehydrogenase, 79.4 1.6 5.5E-05 42.7 4.6 30 113-142 31-62 (283)
377 3dfz_A SIRC, precorrin-2 dehyd 79.4 1.5 5E-05 42.0 4.1 31 111-141 32-63 (223)
378 2dkn_A 3-alpha-hydroxysteroid 79.4 1.8 6E-05 40.9 4.8 31 113-143 4-36 (255)
379 3ijr_A Oxidoreductase, short c 79.2 1.7 5.8E-05 42.8 4.7 30 113-142 50-81 (291)
380 3tfo_A Putative 3-oxoacyl-(acy 79.2 1.3 4.4E-05 43.1 3.8 30 113-142 7-38 (264)
381 3lk7_A UDP-N-acetylmuramoylala 79.1 1.4 4.8E-05 46.5 4.4 46 112-165 11-57 (451)
382 3ucx_A Short chain dehydrogena 79.1 1.6 5.6E-05 42.0 4.5 30 113-142 14-45 (264)
383 3p19_A BFPVVD8, putative blue 79.1 1.7 5.8E-05 42.2 4.6 30 113-142 19-50 (266)
384 4fn4_A Short chain dehydrogena 79.1 1.7 5.8E-05 42.3 4.6 30 113-142 10-41 (254)
385 1zcj_A Peroxisomal bifunctiona 79.0 1.3 4.6E-05 46.9 4.2 31 112-142 39-70 (463)
386 3oj0_A Glutr, glutamyl-tRNA re 78.9 0.79 2.7E-05 40.0 2.0 31 112-142 23-54 (144)
387 3svt_A Short-chain type dehydr 78.9 1.7 5.8E-05 42.3 4.6 30 113-142 14-45 (281)
388 3uf0_A Short-chain dehydrogena 78.9 1.8 6.1E-05 42.2 4.7 29 113-141 34-64 (273)
389 4fs3_A Enoyl-[acyl-carrier-pro 78.8 1.6 5.5E-05 42.1 4.4 30 113-142 9-42 (256)
390 1kyq_A Met8P, siroheme biosynt 78.8 1.1 3.8E-05 44.2 3.2 32 111-142 14-46 (274)
391 1o5i_A 3-oxoacyl-(acyl carrier 78.8 1.8 6.1E-05 41.5 4.6 30 113-142 22-53 (249)
392 2jah_A Clavulanic acid dehydro 78.8 1.8 6.1E-05 41.3 4.6 30 113-142 10-41 (247)
393 3sc4_A Short chain dehydrogena 78.7 1.8 6E-05 42.5 4.6 32 113-144 12-45 (285)
394 2jae_A L-amino acid oxidase; o 78.6 2.9 9.9E-05 44.0 6.7 37 109-145 10-47 (489)
395 1uay_A Type II 3-hydroxyacyl-C 78.6 1.5 5.2E-05 41.1 4.0 31 113-143 5-37 (242)
396 3pgx_A Carveol dehydrogenase; 78.6 1.7 5.8E-05 42.3 4.5 31 113-143 18-50 (280)
397 4e6p_A Probable sorbitol dehyd 78.6 1.8 6.1E-05 41.6 4.6 30 113-142 11-42 (259)
398 3o26_A Salutaridine reductase; 78.6 1.4 4.6E-05 43.2 3.8 30 113-142 15-46 (311)
399 3awd_A GOX2181, putative polyo 78.6 1.8 6.1E-05 41.2 4.6 30 113-142 16-47 (260)
400 2dtx_A Glucose 1-dehydrogenase 78.6 1.9 6.4E-05 41.7 4.8 31 113-143 11-43 (264)
401 2x5o_A UDP-N-acetylmuramoylala 78.6 1.4 4.7E-05 46.4 4.0 32 112-143 7-39 (439)
402 3imf_A Short chain dehydrogena 78.6 1.3 4.5E-05 42.6 3.6 30 113-142 9-40 (257)
403 2wsb_A Galactitol dehydrogenas 78.6 1.8 6.2E-05 41.0 4.6 30 113-142 14-45 (254)
404 3rui_A Ubiquitin-like modifier 78.4 1.9 6.5E-05 43.9 4.9 33 111-143 35-69 (340)
405 2d1y_A Hypothetical protein TT 78.4 1.9 6.6E-05 41.3 4.7 30 113-142 9-40 (256)
406 4gkb_A 3-oxoacyl-[acyl-carrier 78.3 2 6.8E-05 41.9 4.8 31 113-143 10-42 (258)
407 1mv8_A GMD, GDP-mannose 6-dehy 78.3 1.3 4.6E-05 46.4 3.9 30 113-142 3-33 (436)
408 3pef_A 6-phosphogluconate dehy 78.3 1.8 6.3E-05 42.3 4.7 32 112-143 3-35 (287)
409 3uxy_A Short-chain dehydrogena 78.3 1.3 4.3E-05 43.1 3.4 31 113-143 31-63 (266)
410 3op4_A 3-oxoacyl-[acyl-carrier 78.3 1.5 5E-05 42.0 3.8 30 113-142 12-43 (248)
411 3k96_A Glycerol-3-phosphate de 78.2 1.4 4.9E-05 45.0 4.0 32 111-142 30-62 (356)
412 2fwm_X 2,3-dihydro-2,3-dihydro 78.2 2 6.7E-05 41.1 4.7 31 113-143 10-42 (250)
413 2o23_A HADH2 protein; HSD17B10 78.1 2 6.7E-05 41.1 4.7 30 113-142 15-46 (265)
414 2cfc_A 2-(R)-hydroxypropyl-COM 78.1 1.9 6.6E-05 40.7 4.6 30 113-142 5-36 (250)
415 2vdc_G Glutamate synthase [NAD 78.0 3.7 0.00013 43.3 7.2 33 111-143 265-299 (456)
416 3e8x_A Putative NAD-dependent 77.9 1.9 6.7E-05 40.4 4.6 31 112-142 23-55 (236)
417 1bg6_A N-(1-D-carboxylethyl)-L 77.9 1.9 6.4E-05 43.4 4.7 32 111-142 5-37 (359)
418 1vl8_A Gluconate 5-dehydrogena 77.9 1.9 6.6E-05 41.7 4.6 30 113-142 24-55 (267)
419 3v2h_A D-beta-hydroxybutyrate 77.9 1.9 6.4E-05 42.2 4.6 29 113-141 28-58 (281)
420 1uls_A Putative 3-oxoacyl-acyl 77.7 2 6.9E-05 40.9 4.6 30 113-142 8-39 (245)
421 3rih_A Short chain dehydrogena 77.7 1.4 4.8E-05 43.6 3.6 30 113-142 44-75 (293)
422 1iy8_A Levodione reductase; ox 77.6 2 6.7E-05 41.4 4.6 30 113-142 16-47 (267)
423 3dtt_A NADP oxidoreductase; st 77.6 1.7 5.9E-05 41.6 4.2 33 111-143 20-53 (245)
424 1cyd_A Carbonyl reductase; sho 77.6 2 7E-05 40.4 4.6 30 113-142 10-41 (244)
425 3gvc_A Oxidoreductase, probabl 77.5 1.4 4.9E-05 43.0 3.6 30 113-142 32-63 (277)
426 3gg2_A Sugar dehydrogenase, UD 77.5 1.6 5.6E-05 46.1 4.2 31 112-142 4-35 (450)
427 2pd6_A Estradiol 17-beta-dehyd 77.5 2 6.9E-05 40.9 4.6 30 113-142 10-41 (264)
428 3ew7_A LMO0794 protein; Q8Y8U8 77.5 2.2 7.5E-05 39.2 4.7 30 113-142 3-34 (221)
429 3rkr_A Short chain oxidoreduct 77.5 1.6 5.4E-05 42.1 3.8 30 113-142 32-63 (262)
430 3ak4_A NADH-dependent quinucli 77.5 2 6.9E-05 41.2 4.6 30 113-142 15-46 (263)
431 3pk0_A Short-chain dehydrogena 77.4 1.5 5.1E-05 42.4 3.6 30 113-142 13-44 (262)
432 2z1n_A Dehydrogenase; reductas 77.4 2 7E-05 41.2 4.6 30 113-142 10-41 (260)
433 3ftp_A 3-oxoacyl-[acyl-carrier 77.4 1.5 5.1E-05 42.7 3.7 30 113-142 31-62 (270)
434 2nm0_A Probable 3-oxacyl-(acyl 77.3 2.2 7.4E-05 41.0 4.8 31 113-143 24-56 (253)
435 3f9i_A 3-oxoacyl-[acyl-carrier 77.2 1.5 5.2E-05 41.6 3.6 31 112-142 16-48 (249)
436 3ai3_A NADPH-sorbose reductase 77.2 2.1 7.1E-05 41.1 4.6 30 113-142 10-41 (263)
437 3doj_A AT3G25530, dehydrogenas 77.2 2 7E-05 42.7 4.7 32 111-142 22-54 (310)
438 3l9w_A Glutathione-regulated p 77.2 1.7 5.7E-05 45.5 4.2 33 111-143 5-38 (413)
439 1zem_A Xylitol dehydrogenase; 77.1 2.1 7.1E-05 41.2 4.6 30 113-142 10-41 (262)
440 1hdc_A 3-alpha, 20 beta-hydrox 77.1 2.1 7.2E-05 41.0 4.6 30 113-142 8-39 (254)
441 2ae2_A Protein (tropinone redu 77.1 2.1 7.2E-05 41.0 4.6 30 113-142 12-43 (260)
442 1ae1_A Tropinone reductase-I; 77.0 2.1 7.2E-05 41.5 4.6 30 113-142 24-55 (273)
443 4dyv_A Short-chain dehydrogena 77.0 1.5 5.2E-05 42.7 3.6 30 113-142 31-62 (272)
444 3ego_A Probable 2-dehydropanto 76.9 2 6.9E-05 42.7 4.6 30 112-142 4-34 (307)
445 1z82_A Glycerol-3-phosphate de 76.9 2.1 7.2E-05 43.0 4.7 32 111-142 15-47 (335)
446 3tox_A Short chain dehydrogena 76.9 1.4 4.8E-05 43.2 3.3 30 113-142 11-42 (280)
447 3gaf_A 7-alpha-hydroxysteroid 76.8 1.5 5E-05 42.3 3.4 30 113-142 15-46 (256)
448 1yde_A Retinal dehydrogenase/r 76.8 2.1 7.3E-05 41.5 4.6 30 113-142 12-43 (270)
449 4g81_D Putative hexonate dehyd 76.8 1.4 4.7E-05 43.0 3.1 30 113-142 12-43 (255)
450 3t4x_A Oxidoreductase, short c 76.7 1.6 5.5E-05 42.2 3.7 30 113-142 13-44 (267)
451 1nff_A Putative oxidoreductase 76.7 2.2 7.5E-05 41.1 4.6 30 113-142 10-41 (260)
452 3d3w_A L-xylulose reductase; u 76.7 2.2 7.7E-05 40.2 4.6 30 113-142 10-41 (244)
453 2b4q_A Rhamnolipids biosynthes 76.7 2.2 7.6E-05 41.5 4.7 30 113-142 32-63 (276)
454 2rhc_B Actinorhodin polyketide 76.6 2.2 7.4E-05 41.5 4.6 30 113-142 25-56 (277)
455 1sby_A Alcohol dehydrogenase; 76.6 2.3 8E-05 40.5 4.8 30 113-142 8-40 (254)
456 3g0o_A 3-hydroxyisobutyrate de 76.6 1.9 6.5E-05 42.7 4.2 32 111-142 8-40 (303)
457 1h5q_A NADP-dependent mannitol 76.6 2 6.7E-05 41.0 4.2 30 113-142 17-48 (265)
458 4dry_A 3-oxoacyl-[acyl-carrier 76.6 1.6 5.5E-05 42.7 3.6 30 113-142 36-67 (281)
459 3ond_A Adenosylhomocysteinase; 76.5 1.8 6.2E-05 46.1 4.2 31 112-142 267-298 (488)
460 3un1_A Probable oxidoreductase 76.5 1.8 6.2E-05 41.8 4.0 32 113-144 31-64 (260)
461 2bgk_A Rhizome secoisolaricire 76.4 2.2 7.7E-05 41.0 4.6 30 113-142 19-50 (278)
462 3uce_A Dehydrogenase; rossmann 76.4 1.4 4.9E-05 41.2 3.1 31 113-143 9-41 (223)
463 4egf_A L-xylulose reductase; s 76.4 1.6 5.6E-05 42.2 3.6 30 113-142 23-54 (266)
464 2gdz_A NAD+-dependent 15-hydro 76.4 2.2 7.7E-05 41.0 4.6 30 113-142 10-41 (267)
465 3v2g_A 3-oxoacyl-[acyl-carrier 76.3 2.3 8E-05 41.3 4.7 30 113-142 34-65 (271)
466 2zat_A Dehydrogenase/reductase 76.3 1.8 6E-05 41.6 3.8 30 113-142 17-48 (260)
467 4iin_A 3-ketoacyl-acyl carrier 76.3 1.7 5.9E-05 42.0 3.8 30 113-142 32-63 (271)
468 1x1t_A D(-)-3-hydroxybutyrate 76.3 1.8 6.1E-05 41.6 3.9 30 113-142 7-38 (260)
469 3tjr_A Short chain dehydrogena 76.3 2.2 7.6E-05 42.1 4.6 30 113-142 34-65 (301)
470 3h5n_A MCCB protein; ubiquitin 76.2 1.8 6.3E-05 44.2 4.1 32 111-142 119-152 (353)
471 1geg_A Acetoin reductase; SDR 76.2 2.3 7.9E-05 40.7 4.6 30 113-142 5-36 (256)
472 1y8q_A Ubiquitin-like 1 activa 76.2 1.9 6.5E-05 43.9 4.2 33 111-143 37-71 (346)
473 2ehd_A Oxidoreductase, oxidore 76.2 1.8 6.3E-05 40.6 3.8 30 113-142 8-39 (234)
474 3mog_A Probable 3-hydroxybutyr 76.1 1.9 6.4E-05 46.1 4.3 31 112-142 7-38 (483)
475 2ewd_A Lactate dehydrogenase,; 76.1 1.9 6.7E-05 43.1 4.2 32 111-142 5-38 (317)
476 1uzm_A 3-oxoacyl-[acyl-carrier 76.1 1.8 6.2E-05 41.3 3.8 31 113-143 18-50 (247)
477 2a4k_A 3-oxoacyl-[acyl carrier 76.0 2.3 8E-05 41.0 4.6 30 113-142 9-40 (263)
478 3hwr_A 2-dehydropantoate 2-red 76.0 2.3 7.8E-05 42.5 4.6 30 111-141 20-50 (318)
479 3r3s_A Oxidoreductase; structu 76.0 2.2 7.5E-05 42.0 4.5 29 113-141 52-82 (294)
480 3qha_A Putative oxidoreductase 75.9 1.9 6.5E-05 42.6 4.0 33 111-143 16-49 (296)
481 3tl3_A Short-chain type dehydr 75.9 1.8 6.2E-05 41.4 3.8 29 113-141 12-42 (257)
482 3kvo_A Hydroxysteroid dehydrog 75.8 2.2 7.7E-05 43.3 4.6 32 113-144 48-81 (346)
483 1xg5_A ARPG836; short chain de 75.8 2.4 8.1E-05 41.1 4.6 30 113-142 35-66 (279)
484 3oec_A Carveol dehydrogenase ( 75.6 1.8 6.2E-05 43.1 3.8 30 113-142 49-80 (317)
485 1yb1_A 17-beta-hydroxysteroid 75.6 2.4 8.2E-05 41.0 4.6 30 113-142 34-65 (272)
486 4hp8_A 2-deoxy-D-gluconate 3-d 75.6 1.9 6.5E-05 41.9 3.8 30 113-142 12-43 (247)
487 3ksu_A 3-oxoacyl-acyl carrier 75.6 2.1 7.1E-05 41.3 4.1 29 113-141 14-44 (262)
488 1yxm_A Pecra, peroxisomal tran 75.5 2.4 8.1E-05 41.5 4.6 30 113-142 21-52 (303)
489 4da9_A Short-chain dehydrogena 75.5 2.5 8.5E-05 41.3 4.7 29 113-141 32-62 (280)
490 4huj_A Uncharacterized protein 75.5 2 6.7E-05 40.5 3.8 32 111-142 24-57 (220)
491 1vg0_A RAB proteins geranylger 75.5 6.2 0.00021 43.6 8.3 37 109-145 7-44 (650)
492 1txg_A Glycerol-3-phosphate de 75.5 1.9 6.5E-05 42.9 3.9 28 113-140 3-31 (335)
493 1w6u_A 2,4-dienoyl-COA reducta 75.5 2.4 8.2E-05 41.4 4.6 30 113-142 29-60 (302)
494 2q2v_A Beta-D-hydroxybutyrate 75.5 2.1 7.1E-05 41.0 4.0 30 113-142 7-38 (255)
495 3vh1_A Ubiquitin-like modifier 75.4 2.3 8E-05 46.4 4.8 33 111-143 328-362 (598)
496 2pv7_A T-protein [includes: ch 75.4 2.3 8E-05 42.0 4.5 31 112-142 23-55 (298)
497 2ag5_A DHRS6, dehydrogenase/re 75.4 1.9 6.7E-05 40.9 3.8 30 113-142 9-40 (246)
498 3lyl_A 3-oxoacyl-(acyl-carrier 75.3 2 6.8E-05 40.7 3.8 30 113-142 8-39 (247)
499 2vns_A Metalloreductase steap3 75.3 2.7 9.1E-05 39.5 4.7 32 111-142 29-61 (215)
500 3grp_A 3-oxoacyl-(acyl carrier 75.2 1.9 6.6E-05 41.7 3.8 30 113-142 30-61 (266)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=3.6e-33 Score=291.28 Aligned_cols=310 Identities=16% Similarity=0.176 Sum_probs=205.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCC-c-cccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGRE-Q-EWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~-r-~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
+||||||||| +|+++|+.||++|++|+||||++.++.+ + ...|++. .|.++|+..... .+..+....++..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~---~l~~l~~~~~~~---~~~~~~~~~~~~~ 77 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKG---ILNEADIKADRS---FIANEVKGARIYG 77 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETH---HHHHTTCCCCTT---TEEEEESEEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHH---HHHHcCCCchhh---hhhcccceEEEEe
Confidence 5999999965 6999999999999999999998766543 2 3456665 466677754321 1111111111111
Q ss_pred cCC-ccc-----cccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE--cCCc--EEEcCEEEEc
Q 008915 187 EGK-GEI-----WVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEGK--ILSSHLIIDA 256 (549)
Q Consensus 187 ~~~-~~l-----~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~dG~--~i~ArlVI~A 256 (549)
... ..+ ......++.+++..|++.|.+++.+.|++++.+++++++..+++.++... .+++ +++|++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgA 157 (397)
T 3oz2_A 78 PSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAA 157 (397)
T ss_dssp TTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeC
Confidence 110 000 11123457899999999999999999999999999999999888765332 2333 7999999999
Q ss_pred cCCChHHHHHhcCCCC---CCceeeEEeEeeeccC-CCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEE
Q 008915 257 MGNFSPVVKQIRSGRK---PDGVCLVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFT 332 (549)
Q Consensus 257 DG~~S~vrrql~~~~~---~~~~~~~vg~~~~g~~-~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~ 332 (549)
||.+|.++++++.... +..............+ +.+..++++. ... ..+++| .||.+++. ....+..
T Consensus 158 dG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~g~~~-~~~~~~~~--~~vg~~~ 227 (397)
T 3oz2_A 158 DGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLG--SIA-----PAGYIW-VFPKGEGM--ANVGIGS 227 (397)
T ss_dssp CCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECS--TTS-----TTEEEE-EEEEETTE--EEEEEEE
T ss_pred CccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeee--ccC-----CCceEE-Eeecccce--eEEEEee
Confidence 9999999999876532 2222221111111111 2233343332 222 257888 78887651 2233333
Q ss_pred ccCCCCCcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHH
Q 008915 333 YIDPQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLT 412 (549)
Q Consensus 333 ~~~~~~~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~l 412 (549)
..+......++.++++++.+..|.+... +..+...+.+|... ...++..+|++|+|||||+++|++|+|++.++
T Consensus 228 ~~~~~~~~~~~~~~l~~~~~~~~~l~~~-----~~~~~~~~~~~~~~-~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~ 301 (397)
T 3oz2_A 228 SINWIHNRFELKNYLDRFIENHPGLKKG-----QDIQLVTGGVSVSK-VKMPITMPGLMLVGDAARLIDPITGGGIANAI 301 (397)
T ss_dssp ETTTSCSHHHHHHHHHHHHHTCHHHHTS-----EEEEEEEEEEECCC-CCSCCEETTEEECGGGGTCSCTTTCCCHHHHH
T ss_pred ccchhhhhhhHHHHHHHHHHhCcccccc-----ceeeeeeccccccC-cccceeeeeEEEcccccccCCCCcchhHHHHH
Confidence 3322223336788888888877765442 22233345566543 33467789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCChhhhHhhhhhhh
Q 008915 413 RHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMK 444 (549)
Q Consensus 413 rd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~ 444 (549)
.|+..||+.|.++++.++.+...| +.|++
T Consensus 302 ~~g~~~A~~i~~~l~~~~~~~~~L---~~Ye~ 330 (397)
T 3oz2_A 302 VSGMYAAQVTKEAIESNDYSPQMM---QKYEK 330 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCSHHHH---HHHHH
T ss_pred HHHHHHHHHHHHHHHcCCccHHHH---HHHHH
Confidence 999999999999999988766554 67874
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.97 E-value=5.7e-30 Score=268.53 Aligned_cols=308 Identities=16% Similarity=0.171 Sum_probs=204.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-Cc-cccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQ-EWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r-~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
+||||||||| +|+++|+.|+++|++|+||||.+.++. .. ...++. ..+.++|+++..+. ....+....+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~---~~~~~lg~~~~~~~---~~~~~~~~~~~~ 77 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSF---IANEVKGARIYG 77 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTT---EEEEESEEEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCH---HHHHHcCCCCChHH---hhhhcceEEEEc
Confidence 5999999976 599999999999999999999986543 22 223443 46778898754211 111111000000
Q ss_pred cCCcc-ccc-----cccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEc---CCcEEEcCEEEEc
Q 008915 187 EGKGE-IWV-----EDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGKILSSHLIIDA 256 (549)
Q Consensus 187 ~~~~~-l~~-----~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~---dG~~i~ArlVI~A 256 (549)
..+.. +.. ....++.+++..|.+.|.+++.+.|++++.+++|+++..+++.++ |++. ++.+++||+||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A 157 (397)
T 3cgv_A 78 PSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAA 157 (397)
T ss_dssp TTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEEC
Confidence 00000 111 123467899999999999999999999999999999999988876 7663 3558999999999
Q ss_pred cCCChHHHHHhcCCC-C--CCceeeEEeEeeeccC-CCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEE
Q 008915 257 MGNFSPVVKQIRSGR-K--PDGVCLVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFT 332 (549)
Q Consensus 257 DG~~S~vrrql~~~~-~--~~~~~~~vg~~~~g~~-~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~ 332 (549)
||.+|.++++++... . +......+.......+ +.+..++++.. .. ..+++| .||..++ .....+.
T Consensus 158 ~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~g~~~-~~P~~~~---~~~vg~~ 226 (397)
T 3cgv_A 158 DGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGS--IA-----PAGYIW-VFPKGEG---MANVGIG 226 (397)
T ss_dssp CCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECST--TS-----TTEEEE-EEEEETT---EEEEEEE
T ss_pred CCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCC--cC-----CCceEE-EEECCCC---eEEEEEE
Confidence 999999999997665 2 2222221111111111 22233333321 12 357888 7998865 3333333
Q ss_pred ccCCCC-CcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhH
Q 008915 333 YIDPQA-GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSL 411 (549)
Q Consensus 333 ~~~~~~-~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~ 411 (549)
+..... ...+..+.+++|.+..|.+.. .++.+...+.+|... ...++..+|++++|||||.++|++|+|++.+
T Consensus 227 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~p~~~-~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a 300 (397)
T 3cgv_A 227 SSINWIHNRFELKNYLDRFIENHPGLKK-----GQDIQLVTGGVSVSK-VKMPITMPGLMLVGDAARLIDPITGGGIANA 300 (397)
T ss_dssp EETTTCSCHHHHHHHHHHHHHTCHHHHT-----SEEEEEEEEEEECCC-CCSCCEETTEEECGGGGTCSCTTTCCCHHHH
T ss_pred eccccccCCCCHHHHHHHHHHhCcCCCC-----CeEEeeeeeeeecCC-CccceeeCCEEEEEccccCCCCCCCCCHHHH
Confidence 322111 123667788888887765432 223344456778753 3446678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCChhhhHhhhhhh
Q 008915 412 TRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (549)
Q Consensus 412 lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~ 443 (549)
++++..|++.|.+++..+..+... |+.|+
T Consensus 301 ~~~a~~la~~l~~~~~~~~~~~~~---l~~Y~ 329 (397)
T 3cgv_A 301 IVSGMYAAQVTKEAIESNDYSPQM---MQKYE 329 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSHHH---HHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCccHHH---HHHHH
Confidence 999999999999999777654444 45676
No 3
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.97 E-value=2.1e-30 Score=286.99 Aligned_cols=315 Identities=18% Similarity=0.105 Sum_probs=199.0
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC-CCccccCCHHHHHHHHHcCCCCcccchhhhh-hc-cCCCc-
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATA-TK-FNPNR- 183 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~-~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~-~~-~~~~~- 183 (549)
.+||||||||| +|+++|+.|+++|++|+||||.+.+. ..+...|++.+++.|.++|+++...-..... .. +....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 36999999975 59999999999999999999998765 3456789999999999999875321000000 00 11000
Q ss_pred ccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE--cCC-cEEEcCEEEEccCCC
Q 008915 184 CGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG-KILSSHLIIDAMGNF 260 (549)
Q Consensus 184 i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~dG-~~i~ArlVI~ADG~~ 260 (549)
..+. ...+..+....+.+++..|.+.|.+++.+.|++++.+++|++++.++++++|++ .+| ++++||+||+|||.+
T Consensus 128 ~~~~-~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 128 QGLD-FGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp TCCB-GGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred cccc-ccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 0111 011111223356799999999999999988999999999999999999999888 577 689999999999999
Q ss_pred hHHHHHhcCCCC---CCceeeEEeEeeeccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccc-eEEEEEccCC
Q 008915 261 SPVVKQIRSGRK---PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDR-TTYMFTYIDP 336 (549)
Q Consensus 261 S~vrrql~~~~~---~~~~~~~vg~~~~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~-~~~l~~~~~~ 336 (549)
|.+|+++++..+ +...+.+... ..+... ... .. ... ..+++|..+|..++. . ..++......
T Consensus 207 S~vR~~lGi~~~~~~~~~~~~~~~v---~~~~~~-~~~--~~-~~~-----~~G~~~~~~P~~~g~--~~~i~~~~~~~~ 272 (570)
T 3fmw_A 207 STVRRLAADRFPGTEATVRALIGYV---TTPERE-VPR--RW-ERT-----PDGILVLAFPPEGGL--GPGWSSSSTGHS 272 (570)
T ss_dssp CHHHHHTTCCCCCCCCCEEEEEEEC---CCCSCS-SCC--CC-CCC-----CSSCEEECCCC--------CEEEEEESCC
T ss_pred chHHHHcCCCCccceeeeEEEEEEE---EecCCC-cce--EE-Eec-----CCEEEEEEeecCCCe--EEEEEEEeCCCC
Confidence 999999987643 2222221111 011111 000 00 011 235666337887652 2 2222222211
Q ss_pred CC---CcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHHH
Q 008915 337 QA---GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTR 413 (549)
Q Consensus 337 ~~---~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lr 413 (549)
.. ...+.+++.+.+.+.++.. +...+... ....+|.......++..+|++|+|||||.++|++|||+|++++
T Consensus 273 ~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~-~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~ 347 (570)
T 3fmw_A 273 PAADEGPVTLEDLGAAVARVRGTP----LTLTEPVS-WLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQ 347 (570)
T ss_dssp -----CCCCHHHHHHHTTSSSSCC----CCCCSCCE-EEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHH
T ss_pred ccccccCCCHHHHHHHHHHHhhcc----cccceeee-eeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHH
Confidence 11 1225555555444333321 11111110 1124565554556788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCChhhhHhhhhhhhcCc
Q 008915 414 HLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLGD 447 (549)
Q Consensus 414 d~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~d 447 (549)
|+..|++.|..+++... ....|+.|++...
T Consensus 348 DA~~La~~La~~~~g~~----~~~lL~~Ye~eR~ 377 (570)
T 3fmw_A 348 DAVNLGWKLAARVRGWG----SEELLDTYHDERH 377 (570)
T ss_dssp HHHHHHHHHHHHHHSCC----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC----cHHHHHHHHHHHH
Confidence 99999999999886422 2345789995443
No 4
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.97 E-value=3.3e-29 Score=265.24 Aligned_cols=340 Identities=15% Similarity=0.073 Sum_probs=205.8
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.+||||||||| +|+++|+.|+++|++|+|+||.+.++. .+.+.+++..+..|.++|+++. +.. .......+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~--~~~---~~~~~~~~~~ 96 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDI--MET---FGGPLRRMAY 96 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHH--HHH---HSCCCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHH--HHh---hcCCCcceEE
Confidence 36999999976 599999999999999999999987653 3556799999999999998743 111 1111111111
Q ss_pred cC---Ccc---cccc------ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEE
Q 008915 187 EG---KGE---IWVE------DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLII 254 (549)
Q Consensus 187 ~~---~~~---l~~~------~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI 254 (549)
.. +.. +... ....+.+++..|.+.|.+++.+ ++++.+++|+++..++++++|++++|++++|++||
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV 174 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLI 174 (407)
T ss_dssp EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEE
T ss_pred EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEE
Confidence 11 010 0000 1235679999999999999976 88999999999999999999999999999999999
Q ss_pred EccCCChHHHHHh-cCCCCCCc--eeeEEeEee-e-ccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEE
Q 008915 255 DAMGNFSPVVKQI-RSGRKPDG--VCLVVGSCA-R-GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTY 329 (549)
Q Consensus 255 ~ADG~~S~vrrql-~~~~~~~~--~~~~vg~~~-~-g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~ 329 (549)
+|||.+|.+|+++ +....+.. .....+... . ..+.......+. . ..+++| .+|..++ ...+
T Consensus 175 ~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~-~~p~~~~---~~~~ 240 (407)
T 3rp8_A 175 AADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFV-----G-----EGKQVS-LMPVSAG---RFYF 240 (407)
T ss_dssp ECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEE-----E-----TTEEEE-EEEETTT---EEEE
T ss_pred ECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEE-----C-----CCcEEE-EEEcCCC---eEEE
Confidence 9999999999998 54322221 111111111 0 011111111111 1 235666 7888765 3333
Q ss_pred EEEccCCC--C-CcccH-HHHHHHHHHhCcccccc--cCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCC
Q 008915 330 MFTYIDPQ--A-GSPKL-EELLERYWDLMPEYQGV--TLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPV 403 (549)
Q Consensus 330 l~~~~~~~--~-~~~~L-~~l~~~~~~~lp~~~~~--~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pl 403 (549)
.+...... . ..... +.+.+.|....|.+... ........ ....+|.... .++..+|++|||||||.++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~rv~LvGDAAh~~~P~ 316 (407)
T 3rp8_A 241 FFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTN--RIEIHDIEPF--SRLVRGRVALLGDAGHSTTPD 316 (407)
T ss_dssp EEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCE--EEEEEECCCC--SCCEETTEEECGGGTCCCCGG
T ss_pred EEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCcccee--EEeeEecCCC--CceecCCEEEEEcccccCCcc
Confidence 33332111 1 11122 23332222222322221 00111111 1123343321 466789999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhcCcccchhHhhhhhceeecchhHHHHHHHHhhCCCcHHH
Q 008915 404 SFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLGDPVLRPFLQVLLDVIKFGPLAKTLGLVMLNKPQIIPS 483 (549)
Q Consensus 404 tg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~d~~~~~f~~~~~~~~~~~~l~~~l~~~~~~~P~ll~~ 483 (549)
+|||+|.+++|+..|++.|.. .+ .....|+.|++........+.+ +++.. ..++..+.....
T Consensus 317 ~GqG~~~al~da~~La~~L~~---~~----~~~~~l~~Y~~~r~~~~~~~~~-------~s~~~----~~~~~~~~~~~~ 378 (407)
T 3rp8_A 317 IGQGGCAAMEDAVVLGAVFRQ---TR----DIAAALREYEAQRCDRVRDLVL-------KARKR----CDITHGKDMQLT 378 (407)
T ss_dssp GSCHHHHHHHHHHHHHHHHHS---CC----CHHHHHHHHHHHHHHHHHHHHH-------HHHHH----HHHHTTTTHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhc---CC----CHHHHHHHHHHHHHHHHHHHHH-------HHHHh----hhhhhcCCHHHH
Confidence 999999999999999888763 22 2345578999544333222222 22211 345566666666
Q ss_pred HHhhcChh
Q 008915 484 IFKQVGIP 491 (549)
Q Consensus 484 ~~~~~g~~ 491 (549)
..|+.++.
T Consensus 379 ~~R~~~l~ 386 (407)
T 3rp8_A 379 EAWYQELR 386 (407)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66665554
No 5
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.97 E-value=1.3e-28 Score=268.79 Aligned_cols=309 Identities=16% Similarity=0.134 Sum_probs=198.2
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhhc-cCCCccc
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATK-FNPNRCG 185 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~-~~~~~i~ 185 (549)
.+|||+||||| +|+++|+.|+++|++|+||||.+.+.. .+...+++.+++.|.++|++++. ....... .....+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~--~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRF--GEVETSTQGHFGGLP 87 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGG--CSCCBCCEEEETTEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHH--Hhcccccccccccee
Confidence 47999999965 699999999999999999999887653 45678999999999999997542 1110000 0000011
Q ss_pred ccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCc---EEEcCEEEEccCCChH
Q 008915 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK---ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 186 f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~---~i~ArlVI~ADG~~S~ 262 (549)
+.. ..+..+....+.+++..|.+.|.+++.+.|++++.+++|++++.++++++|++.++. +++||+||+|||.+|.
T Consensus 88 ~~~-~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 88 IDF-GVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp EEG-GGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred ccc-ccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 110 011111223467899999999999999999999999999999999999999887664 7999999999999999
Q ss_pred HHHHhcCCCC---CCceeeEEeEeeeccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEE-ccCCCC
Q 008915 263 VVKQIRSGRK---PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFT-YIDPQA 338 (549)
Q Consensus 263 vrrql~~~~~---~~~~~~~vg~~~~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~-~~~~~~ 338 (549)
||+++++..+ +...+..........++ .+.+. .. ..+++| .+|..++ ...+.+. ......
T Consensus 167 VR~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~-----~~g~~~-~~p~~~g---~~~~~~~~~~~~~~ 230 (500)
T 2qa1_A 167 VRKAAGFDFPGTAATMEMYLADIKGVELQP----RMIGE---TL-----PGGMVM-VGPLPGG---ITRIIVCERGTPPQ 230 (500)
T ss_dssp HHHHTTCCCCEECCCCEEEEEEEESCCCCC----EEEEE---EE-----TTEEEE-EEEETTT---EEEEEEEETTCCC-
T ss_pred HHHHcCCCcCCCccceEEEEEEEEeCCCCC----ceEEE---EC-----CCcEEE-EEEcCCC---EEEEEEEcCCCCCc
Confidence 9999976543 22222221111111111 11111 11 135666 7888765 2222222 222111
Q ss_pred ---CcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHHHHH
Q 008915 339 ---GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHL 415 (549)
Q Consensus 339 ---~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lrd~ 415 (549)
...+.+++.+.+.+.++. .....+..+. ..++.......++..+||+|+|||||.++|++|||+|.+++|+
T Consensus 231 ~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~----~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA 304 (500)
T 2qa1_A 231 RRETPPSWHEVADAWKRLTGD--DIAHAEPVWV----SAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDA 304 (500)
T ss_dssp ----CCCHHHHHHHHHHHHSC--CCTTSEEEEE----EEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHhcCC--CCCccceeEE----EEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHH
Confidence 112444444444333331 1111122221 1233333334567789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCChhhhHhhhhhhhcC
Q 008915 416 GRLSTGVYEAVRGDFVDSYSLSLLNPYMKLG 446 (549)
Q Consensus 416 ~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~ 446 (549)
..|+..|...++.. + ....|..|++.+
T Consensus 305 ~~La~~La~~~~g~--~--~~~~L~~Y~~eR 331 (500)
T 2qa1_A 305 VNLGWKLGAVVNGT--A--TEELLDSYHSER 331 (500)
T ss_dssp HHHHHHHHHHHTTS--S--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC--C--ChHHHHHHHHHH
Confidence 99999999888532 1 234578999543
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.97 E-value=1.1e-28 Score=269.06 Aligned_cols=310 Identities=15% Similarity=0.165 Sum_probs=199.9
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhhc-cCCCccc
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATK-FNPNRCG 185 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~-~~~~~i~ 185 (549)
.++||+||||| +|+++|+.|+++|++|+||||.+.+.. .+...+++.+++.|.++|++++.. ...... .......
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~--~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFG--PVETSTQGHFGGRP 88 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGC--SCCEESEEEETTEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHH--hccccccceeccee
Confidence 37999999965 699999999999999999999887653 456789999999999999975421 110000 0000011
Q ss_pred ccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCc---EEEcCEEEEccCCChH
Q 008915 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK---ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 186 f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~---~i~ArlVI~ADG~~S~ 262 (549)
+.. ..+..+....+.+++..|.+.|.+++.+.|++++.+++|++++.++++++|++.++. +++||+||+|||.+|.
T Consensus 89 ~~~-~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 89 VDF-GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EEG-GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred ccc-ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 110 011111223467899999999999999999999999999999999999999987764 8999999999999999
Q ss_pred HHHHhcCCCC---CCceeeEEeEeeeccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEccCCCC-
Q 008915 263 VVKQIRSGRK---PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQA- 338 (549)
Q Consensus 263 vrrql~~~~~---~~~~~~~vg~~~~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~~~~~~- 338 (549)
||+++++..+ +...+..........+ . .+... .. ..+++| .+|..++. ...++........
T Consensus 168 VR~~lg~~~~~~~~~~~~~~~~v~~~~~~--~--~~~~~---~~-----~~g~~~-~~P~~~g~--~~~~~~~~~~~~~~ 232 (499)
T 2qa2_A 168 VRKAAGFDFPGTSASREMFLADIRGCEIT--P--RPIGE---TV-----PLGMVM-SAPLGDGV--DRIIVCERGAPARR 232 (499)
T ss_dssp HHHHTTCCCCEECCCCCEEEEEEESCCCC--C--EEEEE---EE-----TTEEEE-EEECSSSC--EEEEEEETTCCCCC
T ss_pred HHHHcCCCCCCCCCccEEEEEEEEECCCC--c--ceEEE---EC-----CCeEEE-EEEcCCCE--EEEEEEecCCCCcc
Confidence 9999976542 2222222111111111 1 11111 11 135666 78987652 2223222222111
Q ss_pred --CcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHHHHHH
Q 008915 339 --GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLG 416 (549)
Q Consensus 339 --~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~ 416 (549)
...+.+++.+.+.+.++. .....+..+. ..++.......++..+||+|+|||||.++|++|||+|++++|+.
T Consensus 233 ~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~----~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~ 306 (499)
T 2qa2_A 233 RTGPPPYQEVAAAWQRLTGQ--DISHGEPVWV----SAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSV 306 (499)
T ss_dssp CSSSCCHHHHHHHHHHHHSC--CCTTCEEEEE----EEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhCC--CCCccceeEE----EEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHH
Confidence 112445544444333331 1111122211 22344333345677899999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCChhhhHhhhhhhhcC
Q 008915 417 RLSTGVYEAVRGDFVDSYSLSLLNPYMKLG 446 (549)
Q Consensus 417 ~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~ 446 (549)
.|+..|...++... ....|..|++.+
T Consensus 307 ~La~~La~~l~g~~----~~~~L~~Ye~eR 332 (499)
T 2qa2_A 307 NLGWKLAAVVSGRA----PAGLLDTYHEER 332 (499)
T ss_dssp HHHHHHHHHHTTSS----CTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC----ChHHHHHHHHHH
Confidence 99999998886321 234578999543
No 7
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.96 E-value=8.8e-28 Score=258.52 Aligned_cols=306 Identities=17% Similarity=0.180 Sum_probs=192.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC--CC-ccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG--RE-QEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~--~~-r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~ 185 (549)
+||||||||| +|+++|+.|+++|++|+||||.+.++ .. ....+ ....|.++|++... ...+...... +.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~--~~~~~~~~~~--~~ 78 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPK--GEELENKING--IK 78 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCC--GGGEEEEEEE--EE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCc--hHHHHhhhcc--eE
Confidence 5999999975 59999999999999999999988642 11 22334 34567888886532 1111111100 11
Q ss_pred ccC-C--ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEc---CCc--EEEcCEEEEc
Q 008915 186 FEG-K--GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGK--ILSSHLIIDA 256 (549)
Q Consensus 186 f~~-~--~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~---dG~--~i~ArlVI~A 256 (549)
+.. . ..+..+ ..++.+++..|++.|.+++.+.|++++.+++|+++..++++++ |++. +|+ +++||+||+|
T Consensus 79 ~~~~~~~~~~~~~-~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~A 157 (453)
T 3atr_A 79 LYSPDMQTVWTVN-GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEA 157 (453)
T ss_dssp EECTTSSCEEEEE-EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEEC
T ss_pred EECCCCceEEeEC-CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEEC
Confidence 111 0 111111 1246799999999999999999999999999999998888765 5553 665 8999999999
Q ss_pred cCCChHHHHHhcCCCC------CCceeeEEeEeee---ccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccce
Q 008915 257 MGNFSPVVKQIRSGRK------PDGVCLVVGSCAR---GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRT 327 (549)
Q Consensus 257 DG~~S~vrrql~~~~~------~~~~~~~vg~~~~---g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~ 327 (549)
||.+|.++++++...+ +............ ...+.....+++.. +.. ..+|+| .||..++ ..
T Consensus 158 dG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~g~~~-~~P~~~~---~~ 227 (453)
T 3atr_A 158 TGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQ-ETS-----PGGYWW-YFPKGKN---KV 227 (453)
T ss_dssp CGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCT-TTS-----TTSCEE-EEEEETT---EE
T ss_pred cCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECC-CCC-----CCcEEE-EEECCCC---eE
Confidence 9999999998875431 1122221211111 11111222333221 111 246888 7998765 22
Q ss_pred EEEEEccCCCCCcccHHHHHHHHHHh-CcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCC
Q 008915 328 TYMFTYIDPQAGSPKLEELLERYWDL-MPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFG 406 (549)
Q Consensus 328 ~~l~~~~~~~~~~~~L~~l~~~~~~~-lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~ 406 (549)
.+.+.+.... ...+..+.+.++++. .|.+.. .++.+...+.+|... ...++..+|++|||||||.++|++|+
T Consensus 228 ~vg~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~p~~~-~~~~~~~~~v~lvGDAAh~~~P~~G~ 300 (453)
T 3atr_A 228 NVGLGIQGGM-GYPSIHEYYKKYLDKYAPDVDK-----SKLLVKGGALVPTRR-PLYTMAWNGIIVIGDSGFTVNPVHGG 300 (453)
T ss_dssp EEEEEEESSS-CCCCHHHHHHHHHHHHCTTEEE-----EEEEEEEEEEEECSS-CCSCSEETTEEECGGGGTCSCTTTCC
T ss_pred EEEEEecCCC-CCCCHHHHHHHHHHhhhhhcCC-----CeEEeccceeccCCC-CCCceecCCEEEEeCcccCCCCCccc
Confidence 2222222111 112344555555533 333322 233333334566532 23456789999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhh
Q 008915 407 GFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (549)
Q Consensus 407 G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~ 443 (549)
|++.++.|+..|++.|.++++.++.+.. .|+.|+
T Consensus 301 G~~~Ai~da~~la~~l~~~l~~~~~~~~---~L~~Y~ 334 (453)
T 3atr_A 301 GKGSAMISGYCAAKAILSAFETGDFSAS---GLWDMN 334 (453)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCSTT---TTTHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCccHH---HHHHHH
Confidence 9999999999999999999886654333 346777
No 8
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.96 E-value=8.7e-28 Score=254.60 Aligned_cols=305 Identities=15% Similarity=0.113 Sum_probs=200.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhh-----cc--CC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATAT-----KF--NP 181 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~-----~~--~~ 181 (549)
+||||||||| +|+++|+.|+++|++|+||||.++++......+++..+..|.++|+++. +...-.. .+ ..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDA--VKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHH--HHHTTCEEECEEEEEETT
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHH--HHHcCCcccCCcEEEeCC
Confidence 5999999976 5999999999999999999999887755556788888889999998642 1111000 00 00
Q ss_pred C--cccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE--cCCc--EEEcCEEEE
Q 008915 182 N--RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEGK--ILSSHLIID 255 (549)
Q Consensus 182 ~--~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~dG~--~i~ArlVI~ 255 (549)
. .+.|. ..........+.+++..|++.|.+.+.+.|++++.+++|+++..+++++++.+ .+|+ +++||+||+
T Consensus 83 ~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 83 EIADFNFS--DQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp EEEEEETT--SCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEE
T ss_pred eeEEEeeh--hhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEE
Confidence 0 00111 00011122346799999999999999999999999999999999888765544 5777 799999999
Q ss_pred ccCCChHHHHHhcCCCCC---CceeeEEeEeeeccCCCce--eeeeecCCcccccCCCCceeEEEEecCCCCCccceEEE
Q 008915 256 AMGNFSPVVKQIRSGRKP---DGVCLVVGSCARGFKDNST--SDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYM 330 (549)
Q Consensus 256 ADG~~S~vrrql~~~~~~---~~~~~~vg~~~~g~~~~~~--~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l 330 (549)
|||.+|.++++++...+. ...+.... .......... ..+.+...+.. ..+|+| .+|..++ .....
T Consensus 161 A~G~~s~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~-~~P~~~~---~~~vg 230 (421)
T 3nix_A 161 ASGYGRVIPRMFGLDKPSGFESRRTLFTH-IKDVKRPVAAEMEGNRITAVVHK-----PKVWIW-VIPFSNG---NTSVG 230 (421)
T ss_dssp CCGGGCHHHHHTTCEECCSSCCCEEEEEE-EECTTCCC----CCSEEEEEEEE-----TTEEEE-EEECTTS---EEEEE
T ss_pred CCCCchhhHHhcCCCCCCcCCCcEEEEEE-ECCCcCCCccCCCCeEEEEEeCC-----CCEEEE-EEEECCC---CEEEE
Confidence 999999999988765332 12222111 1111110000 11111111111 357888 8999876 33333
Q ss_pred EEccC--CCCCcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCch
Q 008915 331 FTYID--PQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGF 408 (549)
Q Consensus 331 ~~~~~--~~~~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~ 408 (549)
+.+.. ......+.+++++++....|.+... +...+...+ ...+|.+.....++..+|+++||||||+++|++|+|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~ 308 (421)
T 3nix_A 231 FVGEPSYFDEYTGTPEERMRAMIANEGHIAER-FKSEEFLFE-PRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGA 308 (421)
T ss_dssp EEECHHHHTTSCSCHHHHHHHHHHTCTTTHHH-HTTCCBSSC-CEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHH
T ss_pred EEecHHHhhhcCCCHHHHHHHHHHhCcHHHHH-HhcCccccC-ceeecccceeeeeeccCCEEEecccccccCCcccccH
Confidence 33321 1111236778888888877776543 233222211 1234444333446678999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhCCC
Q 008915 409 GSLTRHLGRLSTGVYEAVRGDF 430 (549)
Q Consensus 409 g~~lrd~~~La~~i~~Al~~g~ 430 (549)
+.++.++..|++.|.++++.+.
T Consensus 309 ~~A~~~a~~la~~l~~~~~~~~ 330 (421)
T 3nix_A 309 TFAMESGSKGGKLAVQFLKGEE 330 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999987664
No 9
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.95 E-value=2e-27 Score=250.05 Aligned_cols=313 Identities=15% Similarity=0.123 Sum_probs=187.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC---CCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK---GREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~---~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~ 185 (549)
+|||+||||| +|+++|+.|+++|++|+|+||.+.+ ...+...+++..++.|.++|+++. +... ........+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~--~~~~-~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRR--MARD-GLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHH--HHHH-CEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHH--HHhc-CCccceEEEE
Confidence 5899999975 5999999999999999999998752 223444688999999999999753 1111 0011111111
Q ss_pred ccCCc-ccccc----ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEEC-CEEEEEE-cCCc--EEEcCEEEEc
Q 008915 186 FEGKG-EIWVE----DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLL-AEGK--ILSSHLIIDA 256 (549)
Q Consensus 186 f~~~~-~l~~~----~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dgv~V~~-~dG~--~i~ArlVI~A 256 (549)
..+.. .+..+ ....+.+++..+.+.|.+++.+.|++++.+++|+++..++ +++.|++ ++|+ +++||+||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 11000 00000 1123567888899999999988899999999999998753 4677777 6787 7999999999
Q ss_pred cCCChHHHHHhcCCCCCC--ceeeE-EeEeeeccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEc
Q 008915 257 MGNFSPVVKQIRSGRKPD--GVCLV-VGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTY 333 (549)
Q Consensus 257 DG~~S~vrrql~~~~~~~--~~~~~-vg~~~~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~ 333 (549)
||.+|.+|++++....+. ..... ........+ ....++++.. ...+++| .+|..++ ...+.+..
T Consensus 159 dG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~g~~~-~~~~~~~---~~~~~~~~ 225 (394)
T 1k0i_A 159 DGFHGISRQSIPAERLKVFERVYPFGWLGLLADTP-PVSHELIYAN--------HPRGFAL-CSQRSAT---RSQYYVQV 225 (394)
T ss_dssp CCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSC-CSCSSCEEEC--------CTTCCEE-EEEEETT---EEEEEEEE
T ss_pred CCCCcHHHHhcCccccccccccccceeEEEecCCC-CCccceEEEE--------cCCceEE-EEecCCC---cEEEEEEe
Confidence 999999999886432110 11000 000000111 0001111110 0235666 4554433 23333333
Q ss_pred cCCCCC-cccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHH
Q 008915 334 IDPQAG-SPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLT 412 (549)
Q Consensus 334 ~~~~~~-~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~l 412 (549)
...... ..+.++..+.+.+.++......+....... ...+|.......++..+|++|||||||.++|++|||+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai 303 (394)
T 1k0i_A 226 PLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLE--KSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAA 303 (394)
T ss_dssp CTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEE--EEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHhhCcccccccccCccee--eEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHH
Confidence 221111 112333444444444332100011101111 12334433223356779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhc
Q 008915 413 RHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKL 445 (549)
Q Consensus 413 rd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l 445 (549)
+|+..|++.|..+++.+. ...|+.|++.
T Consensus 304 ~da~~La~~L~~~~~~~~-----~~~L~~Y~~~ 331 (394)
T 1k0i_A 304 SDVSTLYRLLLKAYREGR-----GELLERYSAI 331 (394)
T ss_dssp HHHHHHHHHHHHHHHHCC-----GGGGGGHHHH
T ss_pred HHHHHHHHHHHHHhccCc-----hHHHHHHHHH
Confidence 999999999998876542 2346899954
No 10
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.95 E-value=9.9e-28 Score=253.04 Aligned_cols=307 Identities=15% Similarity=0.107 Sum_probs=192.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhhccCC------
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNP------ 181 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~------ 181 (549)
++||+||||| +|+++|..|+++|++|+|+||.+.++. .+...+++..+..|.++|+++.. ... ......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~--~~~-~~~~~~~~~~~~ 82 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEV--TRR-GGRVRHELEVYH 82 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHH--HHT-TCEEECEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHH--HHh-CCCcceeEEEeC
Confidence 6999999976 599999999999999999999876532 34567888999999999986431 110 000000
Q ss_pred -C--cccccCCccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEECCEE--EEEEcCCcEEEcCEEEE
Q 008915 182 -N--RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAA--VLLLAEGKILSSHLIID 255 (549)
Q Consensus 182 -~--~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv--~V~~~dG~~i~ArlVI~ 255 (549)
+ ...+.. ..+.. ...++.+++..|.+.|.+++.+. |++++.+++|+++..+++++ .|++++|++++||+||+
T Consensus 83 ~g~~~~~~~~-~~~~~-~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 83 DGELLRYFNY-SSVDA-RGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp TTEEEEEEET-TSSCG-GGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCEEEecch-HHhcc-cCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEE
Confidence 0 001110 00111 12346789999999999999988 88999999999999988888 88888888999999999
Q ss_pred ccCCChHHHHHhcCCCCCC-----c--eeeEEeEeeeccCCCceeeeeecCCcccccCCCC-ceeEEEEecCCCCCccce
Q 008915 256 AMGNFSPVVKQIRSGRKPD-----G--VCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSE-VQLFWEAFPAGSGPLDRT 327 (549)
Q Consensus 256 ADG~~S~vrrql~~~~~~~-----~--~~~~vg~~~~g~~~~~~~ei~~~~~~~~~~~~~~-~~~~W~~fP~~~g~~~~~ 327 (549)
|||.+|.++++++...+.. . .+.. +.+....+. .. ..+ . . .+++| .+|.+++ ..
T Consensus 161 AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~-~~~~~~~~~-~~--~~~--~--------~~~~~~~-~~p~~~~---~~ 222 (399)
T 2x3n_A 161 ADGIASYVRRRLLDIDVERRPYPSPMLVGTF-ALAPCVAER-NR--LYV--D--------SQGGLAY-FYPIGFD---RA 222 (399)
T ss_dssp CCCTTCHHHHHTSCCCCCCCCCSSCEEEEEE-ECCHHHHHC-EE--EEE--C--------TTSCEEE-EEEETTT---EE
T ss_pred CCCCChHHHHHhCCCccccCCCCCCceEEEE-EEecCCCCC-cc--EEE--c--------CCCcEEE-EEEcCCC---EE
Confidence 9999999999987653221 1 2211 111101111 11 111 1 1 35566 6787653 33
Q ss_pred EEEEEccCCCCC---c-ccHHHHHHHHHHhCccc--ccccCCceeEeeeeeeeecccc-CCCCCccCCcEEEeCCCCCCC
Q 008915 328 TYMFTYIDPQAG---S-PKLEELLERYWDLMPEY--QGVTLDNLEIQRVIYGIFPTYR-DSPLPAAFNRILQFGDASGIQ 400 (549)
Q Consensus 328 ~~l~~~~~~~~~---~-~~L~~l~~~~~~~lp~~--~~~~l~~~~~~r~~~g~~P~~~-~~~~~~~~~rvlLVGDAA~~v 400 (549)
.+.+.+...... . .+.+++.+.+....+.+ ..+ +... ......+|.+. ....++..+|++|||||||.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~ 298 (399)
T 2x3n_A 223 RLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAI--AAVT--GTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNV 298 (399)
T ss_dssp EEEEECCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHH--HTCC--CSTTCEECCCCCEECSCSEETTEEECGGGTEEC
T ss_pred EEEEEeCccccccccccCCHHHHHHHHhhcCCcchhhHH--hcCC--ccceEEechhhcccccccccCcEEEEechhccC
Confidence 333322110000 0 11122222222222222 111 1110 00112455554 233466789999999999999
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhcC
Q 008915 401 SPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLG 446 (549)
Q Consensus 401 ~Pltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~ 446 (549)
+|++|||+|.+++|+..|++.|..+++.+. +. ...|+.|++..
T Consensus 299 ~P~~GqG~~~al~da~~La~~L~~~~~~~~-~~--~~~l~~Y~~~r 341 (399)
T 2x3n_A 299 HPITGQGMNLAIEDASALADALDLALRDAC-AL--EDALAGYQAER 341 (399)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHHHHTTSS-CH--HHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHHHHHHHhhhcccc-hH--HHHHHHHHHHh
Confidence 999999999999999999999999887542 21 34568999543
No 11
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.95 E-value=1.7e-26 Score=253.57 Aligned_cols=313 Identities=19% Similarity=0.087 Sum_probs=192.3
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhhccCCC----
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPN---- 182 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~---- 182 (549)
.++|||||||| +|+++|+.|+++|++|+||||.+.+.. .+...+++.+++.|.++|+++.. ...- ......
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~--~~~~-~~~~~~~~~~ 80 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEV--VRAD-DIRGTQGDFV 80 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHH--HHSC-CSSCTTSCCE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHH--HhhC-CCccccccee
Confidence 36999999975 699999999999999999999986643 45667999999999999986431 1100 000000
Q ss_pred --cccccCCcccc--------------c-cccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC----EEEEE
Q 008915 183 --RCGFEGKGEIW--------------V-EDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN----AAVLL 241 (549)
Q Consensus 183 --~i~f~~~~~l~--------------~-~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d----gv~V~ 241 (549)
.+....+..+. . .....+.+++..|.+.|.+++.+.|++++.+++|+++..+++ +++++
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~ 160 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTAR 160 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEE
T ss_pred eeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEE
Confidence 00000000000 0 011245689999999999999999999999999999999998 99998
Q ss_pred EcCC---cEEEcCEEEEccCCChHHHHHhcCCCCCCce-eeEEeEeee-ccCC---CceeeeeecCCcccccCCCCceeE
Q 008915 242 LAEG---KILSSHLIIDAMGNFSPVVKQIRSGRKPDGV-CLVVGSCAR-GFKD---NSTSDVIYSSSSVKKVGDSEVQLF 313 (549)
Q Consensus 242 ~~dG---~~i~ArlVI~ADG~~S~vrrql~~~~~~~~~-~~~vg~~~~-g~~~---~~~~ei~~~~~~~~~~~~~~~~~~ 313 (549)
+.++ .+++||+||+|||.+|.+|++++++.+.... ...+..... .++. ......++.. . ..+..
T Consensus 161 ~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----p~~~~ 232 (535)
T 3ihg_A 161 LAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLH---H-----PEFKG 232 (535)
T ss_dssp EEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEE---C-----SSCEE
T ss_pred EEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEE---C-----CCceE
Confidence 8775 6899999999999999999999765421111 001111111 1110 0000000000 0 11223
Q ss_pred EEEecCCCCCccceEEEEEccCCCCC-c--ccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcE
Q 008915 314 WEAFPAGSGPLDRTTYMFTYIDPQAG-S--PKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRI 390 (549)
Q Consensus 314 W~~fP~~~g~~~~~~~l~~~~~~~~~-~--~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rv 390 (549)
| .+|..++ ....+.+.+...... . .+.+++.+.+.+.++.. . ...++.. ...++.......++..+|+
T Consensus 233 ~-~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~-~---~~~~~~~--~~~~~~~~~~a~~~~~grv 303 (535)
T 3ihg_A 233 T-FGPTDRP--DRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAP-E---VKPELVD--IQGWEMAARIAERWREGRV 303 (535)
T ss_dssp E-EEECSST--TEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCS-S---CCCEEEE--EEEEEEEEEEESCSEETTE
T ss_pred E-EEEecCC--CEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCC-C---CceeEEE--eeEeeeeEEEECccccCCE
Confidence 3 3565532 133333333321111 1 12233333222222210 0 1112221 1234444334456778999
Q ss_pred EEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhc
Q 008915 391 LQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKL 445 (549)
Q Consensus 391 lLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l 445 (549)
+|+|||||.++|++|||+|.++.|+..|++.|..+++... . ...|..|++.
T Consensus 304 ~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~-~---~~lL~~Ye~e 354 (535)
T 3ihg_A 304 FLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQA-G---AGLLDTYEDE 354 (535)
T ss_dssp EECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSS-C---TTHHHHHHHH
T ss_pred EEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCC-c---HHHHHhhHHH
Confidence 9999999999999999999999999999999999886432 2 2446889943
No 12
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.95 E-value=5.8e-27 Score=256.18 Aligned_cols=319 Identities=18% Similarity=0.173 Sum_probs=195.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHH-HHHHcCCCCcccchhhhh-----hccCC-
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELL-ELVESGILVEDDIDEATA-----TKFNP- 181 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~-~L~~lGl~~~~eie~~i~-----~~~~~- 181 (549)
+||||||||| +|+++|+.|+++|++|+||||.+.++......+.+.... .+..+|+++...-..... ..+..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKE 86 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCC
Confidence 5999999976 599999999999999999999987765544456666554 778888864211000000 00000
Q ss_pred -C--cccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE---EEEEcCCc--EEEcCEE
Q 008915 182 -N--RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLLAEGK--ILSSHLI 253 (549)
Q Consensus 182 -~--~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv---~V~~~dG~--~i~ArlV 253 (549)
. .+.|... . ......++.+++..|.+.|.+++.+.|++++.+++|+++..+++.+ ++...+|+ +++||+|
T Consensus 87 ~~~~~~~~~~~-~-~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~V 164 (512)
T 3e1t_A 87 PEPWTFGFTRH-P-DDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFI 164 (512)
T ss_dssp SSCEEEESSSS-S-SSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccccccccccC-C-CCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEE
Confidence 0 0111100 0 1112235679999999999999999999999999999999988854 44444574 8999999
Q ss_pred EEccCCChHHHHHhcCCCC---CCceeeEEeEeee--ccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceE
Q 008915 254 IDAMGNFSPVVKQIRSGRK---PDGVCLVVGSCAR--GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTT 328 (549)
Q Consensus 254 I~ADG~~S~vrrql~~~~~---~~~~~~~vg~~~~--g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~ 328 (549)
|+|||.+|.++++++.... +...+. .+.... ..+.......+.. .. ..+++| .+|..++ ...
T Consensus 165 I~AdG~~S~vr~~lg~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~---~~-----~~G~~~-~~Pl~~~---~~~ 231 (512)
T 3e1t_A 165 VDASGNRTRVSQAVGERVYSRFFQNVAL-YGYFENGKRLPAPRQGNILSA---AF-----QDGWFW-YIPLSDT---LTS 231 (512)
T ss_dssp EECCCTTCSSGGGTCCEEECSTTCEEEE-EEEEESCCCCSTTCTTSEEEE---EE-----TTEEEE-EEECSSS---EEE
T ss_pred EECCCcchHHHHHcCCCccCchhcceEE-EEEecCCccCCCCCcCceEEE---Ee-----CCceEE-EEEeCCC---eEE
Confidence 9999999999999854321 112221 111110 1111111111110 01 247888 7999865 333
Q ss_pred EEEEccC--CCCCcccHHHHHHHHHHhCcccccccCCceeEe-eeeeeeec---cccCCCCCccCCcEEEeCCCCCCCCC
Q 008915 329 YMFTYID--PQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQ-RVIYGIFP---TYRDSPLPAAFNRILQFGDASGIQSP 402 (549)
Q Consensus 329 ~l~~~~~--~~~~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~-r~~~g~~P---~~~~~~~~~~~~rvlLVGDAA~~v~P 402 (549)
..+.+.. ........++.++++.+..|.+... +...... ....+.++ .+.....++..+|+++||||||+++|
T Consensus 232 vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~-l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P 310 (512)
T 3e1t_A 232 VGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEY-LAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDP 310 (512)
T ss_dssp EEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHH-HTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCS
T ss_pred EEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHH-HhcCccccccccccceeeccccccccccccCCEEEEechhhcCCC
Confidence 3333321 1111124567777777766655432 1221110 00011111 11112235677999999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhcCc
Q 008915 403 VSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLGD 447 (549)
Q Consensus 403 ltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~d 447 (549)
++|+|++.+++|+..|++.|..+++.+. +. -..|+.|++...
T Consensus 311 ~~GqG~~~Al~dA~~La~~L~~~l~~~~-~~--~~aL~~Ye~~~~ 352 (512)
T 3e1t_A 311 VFSSGVHLATYSALLVARAINTCLAGEM-SE--QRCFEEFERRYR 352 (512)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHTTTCS-CH--HHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHcCCc-cH--HHHHHHHHHHHH
Confidence 9999999999999999999998876432 22 234678985443
No 13
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.95 E-value=4.7e-26 Score=256.48 Aligned_cols=308 Identities=14% Similarity=0.138 Sum_probs=190.9
Q ss_pred cccEEEEcch-HHHHHHHHHHh-----CCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhhccCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSF-----KGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPN 182 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr-----~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~ 182 (549)
++||+||||| +|+++|+.|++ .|++|+||||.+.+.. .+...|++.+++.|+++|++++. .. ......
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l--~~---~~~~~~ 82 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKI--LS---EANDMS 82 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHH--HT---TCBCCC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHH--HH---hccccc
Confidence 6999999965 69999999999 9999999999876543 35678999999999999987531 11 001011
Q ss_pred cccccC---Cccc-----------cccccccceeCHHHHHHHHHHHHHhcC---CEEEeCceEEEEEEEC--------CE
Q 008915 183 RCGFEG---KGEI-----------WVEDILNLGVSPAKLIEIVKKRFISLG---GVIFEGYSVSSICTYE--------NA 237 (549)
Q Consensus 183 ~i~f~~---~~~l-----------~~~~~l~~~V~~~~L~~~L~~~a~~~G---~~v~~~t~v~~i~~~~--------dg 237 (549)
.+.|+. ...+ .......+.+++..|.+.|.+++.+.| +++..+++++++..++ ++
T Consensus 83 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~ 162 (665)
T 1pn0_A 83 TIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYP 162 (665)
T ss_dssp EEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCC
T ss_pred eEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCC
Confidence 111110 0000 011112356899999999999999887 7999999999998875 46
Q ss_pred EEEEEc------------------------------------------CC--cEEEcCEEEEccCCChHHHHHhcCCCCC
Q 008915 238 AVLLLA------------------------------------------EG--KILSSHLIIDAMGNFSPVVKQIRSGRKP 273 (549)
Q Consensus 238 v~V~~~------------------------------------------dG--~~i~ArlVI~ADG~~S~vrrql~~~~~~ 273 (549)
|+|++. +| ++++||+||+|||.+|.||+++++..+.
T Consensus 163 V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g 242 (665)
T 1pn0_A 163 VTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIG 242 (665)
T ss_dssp EEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEE
T ss_pred EEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCC
Confidence 777653 34 4799999999999999999999875432
Q ss_pred Ccee---eEEeEee-eccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEccCCC-------CCccc
Q 008915 274 DGVC---LVVGSCA-RGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQ-------AGSPK 342 (549)
Q Consensus 274 ~~~~---~~vg~~~-~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~~~~~-------~~~~~ 342 (549)
.... .++.... ..+++... ...+.. . ..+++| .+|..++ ...+.+...... ....+
T Consensus 243 ~~~~~~~~v~d~~~~~~~p~~~~-~~~~~~---~-----~~g~~~-~~P~~~~---~~r~~~~~~~~~~~~~~~~~~~~t 309 (665)
T 1pn0_A 243 EQTDYIWGVLDAVPASNFPDIRS-RCAIHS---A-----ESGSIM-IIPRENN---LVRFYVQLQARAEKGGRVDRTKFT 309 (665)
T ss_dssp EEEEEEEEEEEEEEECCCTTTTS-EEEEEC---S-----SSCEEE-EEECSTT---CEEEEEEECC----------CCCC
T ss_pred CCccEEEEEEEEEECCCCCCcce-EEEEEe---C-----CCceEE-EEEcCCC---EEEEEEEeCCccccccccCcCCCC
Confidence 1111 1111111 11221100 011100 0 134555 6787755 233323222211 01124
Q ss_pred HHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCcc-CCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHH
Q 008915 343 LEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTG 421 (549)
Q Consensus 343 L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~-~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~ 421 (549)
.+++.+.+.+.++.+. ..+....+ +..++.......++. .+||+|+|||||.++|++|||+|.++.|+..|+..
T Consensus 310 ~e~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawk 384 (665)
T 1pn0_A 310 PEVVIANAKKIFHPYT-FDVQQLDW----FTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWK 384 (665)
T ss_dssp HHHHHHHHHHHHTTSC-CEEEEEEE----EEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc-CceeeEEE----EEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHH
Confidence 5555554433332211 01111111 122333322344666 69999999999999999999999999999999999
Q ss_pred HHHHHhCCCCChhhhHhhhhhhh
Q 008915 422 VYEAVRGDFVDSYSLSLLNPYMK 444 (549)
Q Consensus 422 i~~Al~~g~l~~~~l~~L~~Y~~ 444 (549)
|...++. . .....|..|++
T Consensus 385 La~vl~g-~---a~~~lL~tYe~ 403 (665)
T 1pn0_A 385 LGLVLTG-R---AKRDILKTYEE 403 (665)
T ss_dssp HHHHHTT-C---BCGGGGHHHHH
T ss_pred HHHHHcC-C---CcHHHHHHHHH
Confidence 9988863 2 12345789994
No 14
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.95 E-value=8.1e-27 Score=259.15 Aligned_cols=316 Identities=15% Similarity=0.104 Sum_probs=197.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhh-------ccCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATAT-------KFNP 181 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~-------~~~~ 181 (549)
++|||||||| +|+++|+.|+++|++|+||||.+.++......+++.....|..+|+++. +...-.. .+..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~--l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEK--IDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHH--HHHHCCEEECEEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHH--HHhcCCcccCCcEEEecC
Confidence 5999999976 5999999999999999999999887766566788999999999998642 1111000 0000
Q ss_pred ----CcccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE-CCEEEEEEc-CC--cEEEcCEE
Q 008915 182 ----NRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAAVLLLA-EG--KILSSHLI 253 (549)
Q Consensus 182 ----~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-~dgv~V~~~-dG--~~i~ArlV 253 (549)
....|............++.+++..|.+.|.+++.+.|++++++++|+++..+ ++.+.|++. +| .+++|++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlV 180 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFV 180 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEE
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEE
Confidence 00111110000001123467899999999999999999999999999999875 556778776 66 58999999
Q ss_pred EEccCCChHHHHHhcCCCCCCceee-EEeEeeec---cCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEE
Q 008915 254 IDAMGNFSPVVKQIRSGRKPDGVCL-VVGSCARG---FKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTY 329 (549)
Q Consensus 254 I~ADG~~S~vrrql~~~~~~~~~~~-~vg~~~~g---~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~ 329 (549)
|+|||.+|.++++++.......... .+...... .+.......+.. .. ..+++| .+|..++ ....
T Consensus 181 V~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~---~~-----~~G~~w-~iPl~~~---~~sv 248 (591)
T 3i3l_A 181 IDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSI---TF-----EDGWVW-MIPIKDD---LYSV 248 (591)
T ss_dssp EECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEE---EE-----TTEEEE-EEECSSS---EEEE
T ss_pred EECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEE---Ec-----CCcEEE-EEECCCC---eEEE
Confidence 9999999999999876432111110 01111111 111111111110 01 247788 7998765 3333
Q ss_pred EEEccCCCCC---cccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCC
Q 008915 330 MFTYIDPQAG---SPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFG 406 (549)
Q Consensus 330 l~~~~~~~~~---~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~ 406 (549)
.+........ ..+.+++++++....|.+... +........ ...++.+.....++..+|+++||||||+++|++|+
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~Gq 326 (591)
T 3i3l_A 249 GLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDI-LGGAEQVDE-VRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQ 326 (591)
T ss_dssp EEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHH-HTTCEECSC-CEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCC
T ss_pred EEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHH-HhcCccccC-ceEecccccchhhcccCCEEEEccccccCCCcccc
Confidence 3332221100 113456666666666654332 111111100 00112221123356789999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhh
Q 008915 407 GFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMK 444 (549)
Q Consensus 407 G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~ 444 (549)
|++++++|+..|++.|..++..+... -..++.|++
T Consensus 327 GinlAl~dA~~LA~~L~~~l~~~~~~---~~al~~Y~~ 361 (591)
T 3i3l_A 327 GVHLASQSAVSAAAAIDRITRHGDEK---DAVHAWYNR 361 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGGH---HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCchH---HHHHHHHHH
Confidence 99999999999999999998765321 234577874
No 15
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=2.1e-25 Score=235.54 Aligned_cols=304 Identities=15% Similarity=0.130 Sum_probs=177.1
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC--CccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR--EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~--~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.+||+||||| +|+++|+.|+++|++|+|+||.+.+.. ...+.+++..++.|.++|+++ ... . .....+.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~----~--~~~~~~~~ 77 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSI----S--VPSSSMEY 77 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGT----C--BCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccc----c--ccccceEE
Confidence 5899999976 599999999999999999999876422 344568899999999999875 111 0 11111111
Q ss_pred c---CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 187 E---GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 187 ~---~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
. .+..+.........+++..|.+.|.+.+ .|++++.+++|+++..++++++|++.+|++++||+||+|||.+|.+
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhH
Confidence 1 1111110000012356778888888876 4789999999999999999999999889899999999999999999
Q ss_pred HHHhcCCCCCCcee--eEEeEeee-ccCCC------ceeeeeecCCcccccCCCCceeEEEEecCCC--CCcc-ceEEEE
Q 008915 264 VKQIRSGRKPDGVC--LVVGSCAR-GFKDN------STSDVIYSSSSVKKVGDSEVQLFWEAFPAGS--GPLD-RTTYMF 331 (549)
Q Consensus 264 rrql~~~~~~~~~~--~~vg~~~~-g~~~~------~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~--g~~~-~~~~l~ 331 (549)
|++++ ...+.... ...+.+.. .++.. ....++... +..++ .+|..+ +... ...+.+
T Consensus 156 r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~g~~~~~~~~~~ 223 (397)
T 2vou_A 156 RKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLD---------DGHLI--AYPIPGRENAESPRLNFQW 223 (397)
T ss_dssp HHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEET---------TEEEE--EEEECCSSTTSCCEEEEEE
T ss_pred HHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecC---------CCEEE--EEECCCCCCccceeEEEEE
Confidence 99998 54332111 01111110 01100 000111100 11111 122221 1000 111111
Q ss_pred EccCCC----------C--------------CcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccC
Q 008915 332 TYIDPQ----------A--------------GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAF 387 (549)
Q Consensus 332 ~~~~~~----------~--------------~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~ 387 (549)
...... . ....++++.+.+...++.+... ++... . . ..+|.+.....++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~-~-~~~~~~~~~~~~~~~ 298 (397)
T 2vou_A 224 YWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKPFRDL-VLNAS--S-P-FVTVVADATVDRMVH 298 (397)
T ss_dssp EEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHHHHHH-HHHCS--S-C-EEEEEEEBCCSCSEE
T ss_pred EecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChHHHHH-HhccC--C-c-ceeeeeeecCCceec
Confidence 111000 0 1113344444432222222211 11100 0 0 123443333446778
Q ss_pred CcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhcC
Q 008915 388 NRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLG 446 (549)
Q Consensus 388 ~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~ 446 (549)
+|++|||||||.++|++|||+|.+++|+..|++.|.. .+ +. -..|+.|++..
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~--~~--~~~L~~Ye~~R 350 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NH--DL--RGSLQSWETRQ 350 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CS--CH--HHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---CC--CH--HHHHHHHHHHH
Confidence 9999999999999999999999999999999888763 11 11 24578999543
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.94 E-value=1.6e-26 Score=242.48 Aligned_cols=307 Identities=18% Similarity=0.105 Sum_probs=185.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.+||+||||| +|+++|..|+++|++|+||||.+.++. .....+++..+..|.++|+++. +.. .......+.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~--~~~---~~~~~~~~~~~ 85 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDD--VLQ---GSHTPPTYETW 85 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHH--HHT---TCBCCSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHH--HHh---hCCCccceEEE
Confidence 5899999976 599999999999999999999887653 3456788999999999998642 111 11111111111
Q ss_pred C-Ccccc-cc--ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 188 G-KGEIW-VE--DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 188 ~-~~~l~-~~--~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
. +..+. .+ ....+.+++..|.+.|.+.+.+.|++++.+++|+++.. ++ .|++++|++++||+||+|||.+|.+
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHH
Confidence 1 11100 00 11136789999999999999999999999999999976 44 7888888899999999999999999
Q ss_pred HHHhcCCCCCCc--eeeEEeEeee-----ccCC-CceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEccC
Q 008915 264 VKQIRSGRKPDG--VCLVVGSCAR-----GFKD-NSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYID 335 (549)
Q Consensus 264 rrql~~~~~~~~--~~~~vg~~~~-----g~~~-~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~~~ 335 (549)
+++++....+.. .....+.+.. ...+ ....+.+.. .. ..+++| .+|.+++ ...+.+....
T Consensus 163 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~-~~p~~~~---~~~~~~~~~~ 230 (379)
T 3alj_A 163 RDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNF---WP-----RVQRIL-YSPCNEN---ELYLGLMAPA 230 (379)
T ss_dssp HHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECC---SS-----SCCEEE-EEECSSS---EEEEEEEECT
T ss_pred HHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceE---EC-----CCCEEE-EEECCCC---cEEEEEEecC
Confidence 999875321111 1000111110 0000 011121101 11 246777 7898865 3333333322
Q ss_pred CCCCcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccC-CCCCccCCcEEEeCCCCCCCCCCCCCchhhHHHH
Q 008915 336 PQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRD-SPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRH 414 (549)
Q Consensus 336 ~~~~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~-~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lrd 414 (549)
..+....+.+.+..+...++.+... ++..+... ...+|.+.. ...++..+|++|||||||.++|++|||+|.+++|
T Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~d 307 (379)
T 3alj_A 231 ADPRGSSVPIDLEVWVEMFPFLEPC-LIEAAKLK--TARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVN 307 (379)
T ss_dssp TCTTTTCSSCCHHHHHHHCGGGHHH-HHHHHTCT--TCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCchhccHHHH-HhhCCccc--eEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHH
Confidence 1111123444455555444411111 00000000 001122211 1234567999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCChhhhHhhhhhhhcC
Q 008915 415 LGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLG 446 (549)
Q Consensus 415 ~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~ 446 (549)
+..|++.|... + + ....|+.|++..
T Consensus 308 a~~La~~L~~~---~--~--~~~~l~~Y~~~r 332 (379)
T 3alj_A 308 AFSLSQDLEEG---S--S--VEDALVAWETRI 332 (379)
T ss_dssp HHHHHHHTTSS---S--C--HHHHHHHHHHHH
T ss_pred HHHHHHHhccc---c--C--HHHHHHHHHHHH
Confidence 98888776431 1 1 134578999543
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.94 E-value=6.7e-25 Score=246.18 Aligned_cols=312 Identities=16% Similarity=0.179 Sum_probs=189.1
Q ss_pred CcccEEEEcch-HHHHHHHHHHh-CCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhh--hh---ccC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSF-KGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEAT--AT---KFN 180 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr-~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i--~~---~~~ 180 (549)
.++||+||||| +|+++|+.|++ +|++|+||||.+.+.. .+...+++.+++.|.++|++++ +...- .. -+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~--~~~~~~~~~~~~~~~ 108 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADS--ILKEACWINDVTFWK 108 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHH--HHHHSEEECEEEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHH--HHHhcccccceEEEC
Confidence 36999999965 69999999999 9999999999986653 3567899999999999998643 11100 00 000
Q ss_pred -----CCcccccC---CccccccccccceeCHHHHHHHHHHHHHhcCC--EEEeCceEEEEEEECC----EEEEEEc---
Q 008915 181 -----PNRCGFEG---KGEIWVEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN----AAVLLLA--- 243 (549)
Q Consensus 181 -----~~~i~f~~---~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~--~v~~~t~v~~i~~~~d----gv~V~~~--- 243 (549)
.+.+.... ...........+.+++..+.+.|.+++.+.|+ +++.+++|+++..+++ +++|+++
T Consensus 109 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~ 188 (639)
T 2dkh_A 109 PDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCD 188 (639)
T ss_dssp ECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECS
T ss_pred CCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecc
Confidence 01110000 00000011112468999999999999999987 9999999999998763 5777765
Q ss_pred ---CC--cEEEcCEEEEccCCChHHHHHhcCCCC---CCceeeEEeEee-eccCCCceeeeeecCCcccccCCCCceeEE
Q 008915 244 ---EG--KILSSHLIIDAMGNFSPVVKQIRSGRK---PDGVCLVVGSCA-RGFKDNSTSDVIYSSSSVKKVGDSEVQLFW 314 (549)
Q Consensus 244 ---dG--~~i~ArlVI~ADG~~S~vrrql~~~~~---~~~~~~~vg~~~-~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W 314 (549)
+| .+++||+||+|||.+|.||+++++..+ ......++.... ..+++.. ....+ .. ..+++|
T Consensus 189 ~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~-~~~~~-----~~----~~g~~~ 258 (639)
T 2dkh_A 189 AAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVR-YKVAI-----QS----EQGNVL 258 (639)
T ss_dssp GGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTT-SEEEE-----EE----TTEEEE
T ss_pred ccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccc-eeEEE-----Ec----CCceEE
Confidence 45 479999999999999999999976532 111111111111 1122110 00111 00 135666
Q ss_pred EEecCCCCCccceEEEEEccC--CC----CCcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCcc--
Q 008915 315 EAFPAGSGPLDRTTYMFTYID--PQ----AGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAA-- 386 (549)
Q Consensus 315 ~~fP~~~g~~~~~~~l~~~~~--~~----~~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~-- 386 (549)
.+|..++. ...+.+.... .. ....+.+++.+.+.+.+..+. ..+....+ +..++.......++.
T Consensus 259 -~~P~~~~~--~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~a~~~~~~ 330 (639)
T 2dkh_A 259 -IIPREGGH--LVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYK-LEVKNVPW----WSVYEIGQRICAKYDDV 330 (639)
T ss_dssp -EEECTTSS--CEEEEEECC-----------CCCHHHHHHHHHHHHTTSC-EEEEEEEE----EEEECCCCEECSCSBSC
T ss_pred -EEEcCCCc--EEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCccc-CcceeeeE----EEecccccchhhhhhcc
Confidence 68877541 2223333222 00 011244555544433332211 00111111 112232211222333
Q ss_pred ----------CCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhh
Q 008915 387 ----------FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMK 444 (549)
Q Consensus 387 ----------~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~ 444 (549)
.+||+|+|||||.++|++|||+|.++.|+..|+..|...++.. + ....|..|++
T Consensus 331 ~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~--a--~~~lL~~Ye~ 394 (639)
T 2dkh_A 331 VDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQ--C--APELLHTYSS 394 (639)
T ss_dssp CCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTS--B--CGGGGHHHHH
T ss_pred ccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCC--C--cHHHHHHHHH
Confidence 7999999999999999999999999999999999999888642 1 2245688993
No 18
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.94 E-value=3.7e-25 Score=232.23 Aligned_cols=324 Identities=17% Similarity=0.170 Sum_probs=174.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCC-c--cccCCHHHHHHHHHcCCCCcccchhhhh-hccCCCccc
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGRE-Q--EWNISRKELLELVESGILVEDDIDEATA-TKFNPNRCG 185 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~-r--~~~IS~~~l~~L~~lGl~~~~eie~~i~-~~~~~~~i~ 185 (549)
-.|+||||| +|+++|+.|+++|++|+|+||.+.+... + ...+++..+..|.++|+.+. +..+.. .........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~--~~~~~~~~~~~~~~~~ 79 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAEN--WLAFEEASRYIGGQSR 79 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHH--HHHHHHHCEEECCCCE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHH--HHHhhhhhcccCccee
Confidence 369999965 6999999999999999999998876542 2 23577899999999997542 111100 001000000
Q ss_pred c----------cCC-cccc--ccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC-EEEEEEcCCcEEEcC
Q 008915 186 F----------EGK-GEIW--VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSH 251 (549)
Q Consensus 186 f----------~~~-~~l~--~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~dG~~i~Ar 251 (549)
+ .+. .+.. ......+.|++..|.+.|.+.+ +.+|+.++++++++..++ +++|+++||++++||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ad 156 (412)
T 4hb9_A 80 FYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVD 156 (412)
T ss_dssp EECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEES
T ss_pred EecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEee
Confidence 0 000 0000 0001124688888888887654 457999999999987655 588999999999999
Q ss_pred EEEEccCCChHHHHHhcCCCCCCcee--eEEeEeeeccC-CCceeeeeecCCcccccCCCCc---eeEEEEecCCCCC--
Q 008915 252 LIIDAMGNFSPVVKQIRSGRKPDGVC--LVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEV---QLFWEAFPAGSGP-- 323 (549)
Q Consensus 252 lVI~ADG~~S~vrrql~~~~~~~~~~--~~vg~~~~g~~-~~~~~ei~~~~~~~~~~~~~~~---~~~W~~fP~~~g~-- 323 (549)
+||+|||.+|.||++++...+..... ...+....... .....+.+....+....+.... -.+| ..|.....
T Consensus 157 lvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 235 (412)
T 4hb9_A 157 VLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMW-RAPVNIHVEA 235 (412)
T ss_dssp EEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEE-EEESCTTSCG
T ss_pred EEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeee-ecCCceeEEE
Confidence 99999999999999997654432211 11111100000 0000000000000000000000 1122 12221100
Q ss_pred -----ccceEEEEEcc-CCCCCc------ccHHHHHHHHH-HhCcccccccCCceeEeeeeeeeeccccC-CCCCccCCc
Q 008915 324 -----LDRTTYMFTYI-DPQAGS------PKLEELLERYW-DLMPEYQGVTLDNLEIQRVIYGIFPTYRD-SPLPAAFNR 389 (549)
Q Consensus 324 -----~~~~~~l~~~~-~~~~~~------~~L~~l~~~~~-~~lp~~~~~~l~~~~~~r~~~g~~P~~~~-~~~~~~~~r 389 (549)
.....+++... +..+.. ..+.+.+.+.+ ...|.++.+ ++...... . ..++.+.. ...++..+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-i~~~~~~~-~-~~~~~~~~~~~~~~~~gr 312 (412)
T 4hb9_A 236 SLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTL-VQQSDMEN-I-SPLHLRSMPHLLPWKSST 312 (412)
T ss_dssp GGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHH-HHTSCTTC-C-EEEEEEECCCCCCCCCCS
T ss_pred eccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHH-HHhcccce-e-ccchhccccccccccccC
Confidence 01112222111 111111 12222222222 122333221 01100000 0 00111111 123567799
Q ss_pred EEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhcC
Q 008915 390 ILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLG 446 (549)
Q Consensus 390 vlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~ 446 (549)
|+|||||||.++|+.|||+|.++.|+..|++.|..++.... +. -..|+.||+..
T Consensus 313 v~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~-~~--~~aL~~Ye~~R 366 (412)
T 4hb9_A 313 VTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHE-EL--VKAISDYEQQM 366 (412)
T ss_dssp EEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSS-CH--HHHHHHHHHHH
T ss_pred EEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCc-CH--HHHHHHHHHHH
Confidence 99999999999999999999999999999999998876542 21 23478999543
No 19
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.93 E-value=8.4e-25 Score=231.91 Aligned_cols=308 Identities=18% Similarity=0.243 Sum_probs=182.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCc-EEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLR-VAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Glr-VlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
++|||||||| +|+++|..|+++|++ |+|+||.+.++. .+...+++..++.|.++|+++. +... ......+.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~--l~~~---~~~~~~~~~ 78 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPA--LAAT---AIPTHELRY 78 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHH--HHHH---SEEECEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHH--HHhh---CCCcceEEE
Confidence 5899999975 599999999999999 999999887653 3456788999999999998643 2111 000000111
Q ss_pred cC--Cccccc-------c-ccccceeCHHHHHHHHHHHHHhc-CC-EEEeCceEEEEEEECCEEEEEEcC---C--cEEE
Q 008915 187 EG--KGEIWV-------E-DILNLGVSPAKLIEIVKKRFISL-GG-VIFEGYSVSSICTYENAAVLLLAE---G--KILS 249 (549)
Q Consensus 187 ~~--~~~l~~-------~-~~l~~~V~~~~L~~~L~~~a~~~-G~-~v~~~t~v~~i~~~~dgv~V~~~d---G--~~i~ 249 (549)
.. +..+.. . ....+.+++..|.+.|.+++.+. |. +++.+++|+++.. +++++|++.+ | .+++
T Consensus 79 ~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ 157 (410)
T 3c96_A 79 IDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALG 157 (410)
T ss_dssp ECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEE
T ss_pred EcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEe
Confidence 10 000000 0 01125689999999999999873 74 8999999999988 7788888765 7 4899
Q ss_pred cCEEEEccCCChHHHHHhcCCCCCCcee---eEEeEee-eccCCCceeeeeecCCcccccCCCCceeEEEEecCCC----
Q 008915 250 SHLIIDAMGNFSPVVKQIRSGRKPDGVC---LVVGSCA-RGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGS---- 321 (549)
Q Consensus 250 ArlVI~ADG~~S~vrrql~~~~~~~~~~---~~vg~~~-~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~---- 321 (549)
||+||+|||.+|.+|++++......... ...+... ..+..... .+++. + . ..+++| .||..+
T Consensus 158 ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~--~-~-----~~~~~~-~~p~~~~~~~ 227 (410)
T 3c96_A 158 ADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKT-MIVAN--D-E-----HWSRLV-AYPISARHAA 227 (410)
T ss_dssp ESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSE-EEEEE--C-T-----TCCEEE-EEECCHHHHT
T ss_pred cCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCe-EEEec--C-C-----CCcEEE-EEecCCcccC
Confidence 9999999999999999986543211111 1001110 01101111 11111 1 0 124455 577642
Q ss_pred -CCccceEEEEEccC--------CCC-C-cccHHHHHHHHHHhCc---ccccccCCceeEeeeeeeeeccccCC-CCCcc
Q 008915 322 -GPLDRTTYMFTYID--------PQA-G-SPKLEELLERYWDLMP---EYQGVTLDNLEIQRVIYGIFPTYRDS-PLPAA 386 (549)
Q Consensus 322 -g~~~~~~~l~~~~~--------~~~-~-~~~L~~l~~~~~~~lp---~~~~~~l~~~~~~r~~~g~~P~~~~~-~~~~~ 386 (549)
+. ....+.+.... ... . ....+++.+.|....+ .+... +.... .. ..+|..... ..++.
T Consensus 228 ~g~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-i~~~~---~~-~~~~~~~~~~~~~~~ 301 (410)
T 3c96_A 228 EGK-SLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDL-LTRNQ---LI-LQYPMVDRDPLPHWG 301 (410)
T ss_dssp TTC-EEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHH-HHTCS---EE-EEEEEEECCCCSCCC
T ss_pred CCC-cEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHH-HhcCc---cc-ceeecccCCCccccc
Confidence 21 12222222110 000 1 1244555544332211 11111 01111 01 123433222 23567
Q ss_pred CCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhcC
Q 008915 387 FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLG 446 (549)
Q Consensus 387 ~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~ 446 (549)
.+||+|||||||.++|++|||+|++++|+..|++.|... + .....|+.|++..
T Consensus 302 ~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~----~~~~~L~~Ye~~r 354 (410)
T 3c96_A 302 RGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---A----DVAAALREYEEAR 354 (410)
T ss_dssp BTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---S----SHHHHHHHHHHHH
T ss_pred cCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---C----CHHHHHHHHHHHH
Confidence 799999999999999999999999999999999887652 2 1234578999543
No 20
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.93 E-value=3.7e-24 Score=236.07 Aligned_cols=306 Identities=13% Similarity=0.088 Sum_probs=184.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-CccccCCHHHHHHHHHcCCCCcccchhhhhh-----cc-C-
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATAT-----KF-N- 180 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~-----~~-~- 180 (549)
++||+||||| +|+++|+.|+++|++|+||||.+.+.. .+...++..+++.|.++|+++...-...... .+ .
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 5999999965 699999999999999999999976543 3566789999999999998642110000000 00 0
Q ss_pred -CC-c---ccccCCc---cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcC---C--cE
Q 008915 181 -PN-R---CGFEGKG---EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---G--KI 247 (549)
Q Consensus 181 -~~-~---i~f~~~~---~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~d---G--~~ 247 (549)
.+ . +.+.... .........+.+++..|.+.|.+++.+. ++.+++|++++.++++|+|++.+ | .+
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~ 182 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRA 182 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEE
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEE
Confidence 00 0 0010000 0000011236689999999999999876 99999999999999999888765 6 47
Q ss_pred EEcCEEEEccCCChHHHHHhcCCCCC---CceeeEEeEeeeccC---CCceeeeeecCCcccccCCCCceeEEEEecCCC
Q 008915 248 LSSHLIIDAMGNFSPVVKQIRSGRKP---DGVCLVVGSCARGFK---DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGS 321 (549)
Q Consensus 248 i~ArlVI~ADG~~S~vrrql~~~~~~---~~~~~~vg~~~~g~~---~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~ 321 (549)
++||+||+|||.+|.||++++++.+. .+.+..+......+. ........+. ..+ +...+| .+|..+
T Consensus 183 i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p----~~~~~~-~~p~~~ 254 (549)
T 2r0c_A 183 VHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFL---MLS----SSLRFP-LRALDG 254 (549)
T ss_dssp EEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEE---EEE----TTEEEE-EEESSS
T ss_pred EEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEE---ECC----CCcEEE-EEEECC
Confidence 99999999999999999999875432 121111111000010 0000000000 001 112334 566643
Q ss_pred CCccceEEEEEccC-CC-CCcccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCC
Q 008915 322 GPLDRTTYMFTYID-PQ-AGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGI 399 (549)
Q Consensus 322 g~~~~~~~l~~~~~-~~-~~~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~ 399 (549)
+ .. +.+.... .. .....+.+.+++++. . .. . .++... ..++.......++..+||+|+|||||.
T Consensus 255 ~--~~--~~~~~~~~~~~~~~~~~~~~l~~~~~---~--~~--~-~~~~~~--~~~~~~~~~a~~~~~grv~L~GDAAH~ 320 (549)
T 2r0c_A 255 R--GL--YRLTVGVDDASKSTMDSFELVRRAVA---F--DT--E-IEVLSD--SEWHLTHRVADSFSAGRVFLTGDAAHT 320 (549)
T ss_dssp S--SE--EEEEEECSTTCCSCCCHHHHHHHHBC---S--CC--C-CEEEEE--EEEEECCEECSCSEETTEEECGGGTEE
T ss_pred C--cE--EEEEecCCCCCCCHHHHHHHHHHHhC---C--CC--c-eeEEEE--ecchhHhhhHHhhcCCcEEEEcccccc
Confidence 2 12 2222211 11 111244555544432 1 11 1 122211 223333333446778999999999999
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhh
Q 008915 400 QSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMK 444 (549)
Q Consensus 400 v~Pltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~ 444 (549)
++|+.|||+|.+++|+..|+..|...++... . ...|..|++
T Consensus 321 ~~P~~GqG~n~gi~DA~~La~~La~~l~g~a-~---~~lL~~Y~~ 361 (549)
T 2r0c_A 321 LSPSGGFGMNTGIGSAADLGWKLAATLRGWA-G---PGLLATYEE 361 (549)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHHHHHHHHTCS-C---TTTTHHHHH
T ss_pred CCCccCCccccccHHHHHHHHHHHHHHcCCC-C---HHHHHHHHH
Confidence 9999999999999999999999998886421 1 234688994
No 21
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.91 E-value=2e-24 Score=228.18 Aligned_cols=154 Identities=16% Similarity=0.182 Sum_probs=108.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC---CccccCCH-HHHHHHHHcCCCCcccchhhhhhccCCCcc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR---EQEWNISR-KELLELVESGILVEDDIDEATATKFNPNRC 184 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~---~r~~~IS~-~~l~~L~~lGl~~~~eie~~i~~~~~~~~i 184 (549)
++||+||||| +|+++|..|+++|++|+|+||.+.+.. ...+.+++ .....|.++|+++. +.... ..... .+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~--~~~~~-~~~~~-~~ 101 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQT--YYDLA-LPMGV-NI 101 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHH--HHHHC-BCCCE-EE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHH--HHHhh-cccce-EE
Confidence 5899999976 599999999999999999999876532 12344543 34778899998753 21110 00000 00
Q ss_pred cccCCccc-cc--c---ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccC
Q 008915 185 GFEGKGEI-WV--E---DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 258 (549)
Q Consensus 185 ~f~~~~~l-~~--~---~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG 258 (549)
....+..+ .. + ......+++..|.+.|.+++.+ ++++.+++|+++..++++++|++.+|++++||+||+|||
T Consensus 102 ~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG 179 (398)
T 2xdo_A 102 ADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANG 179 (398)
T ss_dssp ECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSC
T ss_pred ECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCC
Confidence 00001000 00 1 0112458999999999987753 689999999999998888999998888899999999999
Q ss_pred CChHHHHHhcC
Q 008915 259 NFSPVVKQIRS 269 (549)
Q Consensus 259 ~~S~vrrql~~ 269 (549)
.+|.+|++++.
T Consensus 180 ~~S~vR~~l~~ 190 (398)
T 2xdo_A 180 GMSKVRKFVTD 190 (398)
T ss_dssp TTCSCCTTTCC
T ss_pred cchhHHhhccC
Confidence 99999998853
No 22
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.91 E-value=1.3e-22 Score=225.27 Aligned_cols=323 Identities=14% Similarity=0.093 Sum_probs=182.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhC------CCcEEEEccCCCCCCC--ccccCCHHHHHHHHHcCCCCc--ccchhhhhh-
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK------GLRVAIVERNTLKGRE--QEWNISRKELLELVESGILVE--DDIDEATAT- 177 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~------GlrVlLIEr~~~~~~~--r~~~IS~~~l~~L~~lGl~~~--~eie~~i~~- 177 (549)
+||||||||| +|+++|+.|+++ |++|+||||.+.++.+ ....+++..++.| ++-|.. ..++..+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CTTHHHHTCCCCEECCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HHHHHhcCCceeeeechh
Confidence 5999999965 699999999998 9999999999876542 2234666666555 221110 001000000
Q ss_pred c--c-CC-CcccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EE-EEEc------CC
Q 008915 178 K--F-NP-NRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AV-LLLA------EG 245 (549)
Q Consensus 178 ~--~-~~-~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~-V~~~------dG 245 (549)
. + .. ..+.+............++.+++..|.++|.+++.+.|++++.+++|+++..++++ ++ |.+. +|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 0 0 00 01111100000011112567899999999999999999999999999999887754 43 6654 23
Q ss_pred ---------cEEEcCEEEEccCCChHHHHHh----cCCC--CCCceeeEEeEeeeccC--CCceeee--eecCCcccccC
Q 008915 246 ---------KILSSHLIIDAMGNFSPVVKQI----RSGR--KPDGVCLVVGSCARGFK--DNSTSDV--IYSSSSVKKVG 306 (549)
Q Consensus 246 ---------~~i~ArlVI~ADG~~S~vrrql----~~~~--~~~~~~~~vg~~~~g~~--~~~~~ei--~~~~~~~~~~~ 306 (549)
.+++||+||+|||.+|.+++++ +... .+......+.... .++ ....+.+ .+.. +....
T Consensus 193 ~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~-~v~~~~~~~~~~~~~~g~-~~~~~- 269 (584)
T 2gmh_A 193 APKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELW-VIDEKKWKPGRVDHTVGW-PLDRH- 269 (584)
T ss_dssp CEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEE-ECCGGGCCTTEEEEEEET-TSCTT-
T ss_pred CcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhhe-ecCcccccCCeEEEEEec-cccCC-
Confidence 5899999999999999999887 4332 1222221111111 111 0111111 1111 11110
Q ss_pred CCCceeEEEEecCC--CCCccceEEEEEccCCCCC-cccHHHHHHHHHHhCcccccccCCceeEeeee-eeeeccccCCC
Q 008915 307 DSEVQLFWEAFPAG--SGPLDRTTYMFTYIDPQAG-SPKLEELLERYWDLMPEYQGVTLDNLEIQRVI-YGIFPTYRDSP 382 (549)
Q Consensus 307 ~~~~~~~W~~fP~~--~g~~~~~~~l~~~~~~~~~-~~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~-~g~~P~~~~~~ 382 (549)
..+..| .||.. ++ ...+.+.......+ ..+..+.+++|.. .|.+... ++..+..... ...++......
T Consensus 270 --~~gg~~-~~~~~~~~~---~~~vg~~~~~~~~~~~~~~~~~l~~~~~-~p~i~~~-l~~~~~~~~~~~~~~~~~~~~~ 341 (584)
T 2gmh_A 270 --TYGGSF-LYHLNEGEP---LLALGFVVGLDYQNPYLSPFREFQRWKH-HPSIKPT-LEGGKRIAYGARALNEGGFQSI 341 (584)
T ss_dssp --SCEEEE-EEECCSSSC---EEEEEEEEETTCCCTTCCHHHHHHHHTT-STTTHHH-HTTCEEEEEEEEEEECCGGGGC
T ss_pred --cCCceE-EEEecCCCC---eEEEEEEEecCcccccCChHHHHHHHHh-ChHHHHH-hCCCeEEEecceEccCCCcccC
Confidence 112344 45655 33 23333322211111 1133455555543 3444432 2222222111 11223322233
Q ss_pred CCccCCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHhCCC-CChhhhHhhhhhhhc
Q 008915 383 LPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDF-VDSYSLSLLNPYMKL 445 (549)
Q Consensus 383 ~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~~Al~~g~-l~~~~l~~L~~Y~~l 445 (549)
.++..+|++|||||||+++|++|+|+++++.|+..|++.|..+++.++ ....+...|+.|++.
T Consensus 342 ~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~ 405 (584)
T 2gmh_A 342 PKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDN 405 (584)
T ss_dssp CCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHH
T ss_pred CccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHH
Confidence 466789999999999999999999999999999999999999997663 222210125789843
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.90 E-value=4.6e-23 Score=226.00 Aligned_cols=290 Identities=14% Similarity=0.141 Sum_probs=170.9
Q ss_pred cccEEEEcch-HHHHHHHHHHh------------CCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhh
Q 008915 110 TFDVIVCGGT-LGIFIATALSF------------KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATA 176 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr------------~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~ 176 (549)
.+|||||||| +|+++|+.|++ .|++|+|||+...++......+.+.....|..+|+.+..-+...-.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~~ 86 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSMRSTLSKIGIDENDFIRQCDA 86 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCSCEECCTHHHHHHHHHTCCHHHHHHHTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcceeeechHhHHHHHHHcCCCHHHHHHHcCC
Confidence 6899999976 59999999999 9999999999877654434467778888999999875310111100
Q ss_pred h--------ccCC------Cc--------------cccc------CC--------------------------ccccccc
Q 008915 177 T--------KFNP------NR--------------CGFE------GK--------------------------GEIWVED 196 (549)
Q Consensus 177 ~--------~~~~------~~--------------i~f~------~~--------------------------~~l~~~~ 196 (549)
. .+.. +. +.+. +. ..+..+.
T Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~~ 166 (526)
T 2pyx_A 87 SFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQN 166 (526)
T ss_dssp EEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCSS
T ss_pred EEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCCC
Confidence 0 0000 00 0010 00 0000001
Q ss_pred cccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEE--EEEEcCCcEEEcCEEEEccCCChHH-HHHhcCCCC
Q 008915 197 ILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA--VLLLAEGKILSSHLIIDAMGNFSPV-VKQIRSGRK 272 (549)
Q Consensus 197 ~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv--~V~~~dG~~i~ArlVI~ADG~~S~v-rrql~~~~~ 272 (549)
...+.+++..|.+.|.+++.+ .|++++.+ +|+++..+++++ .|.+++|.+++||+||+|||.+|.+ ++.++.+..
T Consensus 167 ~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~ 245 (526)
T 2pyx_A 167 NYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFL 245 (526)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEE
T ss_pred CeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCcc
Confidence 123568999999999999998 89999999 699998876653 5666677789999999999999998 556654321
Q ss_pred ------CCceeeEEeEeeeccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEccCCCCCcccHHHH
Q 008915 273 ------PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEEL 346 (549)
Q Consensus 273 ------~~~~~~~vg~~~~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~~~~~~~~~~L~~l 346 (549)
+...+..+.................. .. ..+++| .+|..++ ....+.+...........+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~g~~~-~~pl~~~----~~~~~v~~~~~~~~~~~~~~ 312 (526)
T 2pyx_A 246 SQKSVLFNDRALAIQVPYSDANSPIASCTHST---AQ-----PNGWIW-DIGLPTR----KGVGYVYSSSHTNDIDAQKT 312 (526)
T ss_dssp ECHHHHCCCEEEEEEEECSSTTCCCCSSEEEE---EE-----TTEEEE-EEECSSE----EEEEEEECTTTCCHHHHHHH
T ss_pred cccccccCccEEEEEeeccCCCCCCCCceeEE---ec-----CCCeEE-EeeCCCc----eEEEEEecCCCCChHHHHHH
Confidence 01111111111110000000000000 01 246788 7898753 22222222211122234444
Q ss_pred HHHHHHhCc-ccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHH
Q 008915 347 LERYWDLMP-EYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 423 (549)
Q Consensus 347 ~~~~~~~lp-~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~ 423 (549)
+.+++.... .+.. .+.. .++.......++..+|++|||||||.++|++|+|++.++.|+..|++.|.
T Consensus 313 l~~~l~~~~~~l~~---~~~~-------~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~ 380 (526)
T 2pyx_A 313 LFNYLGVDGAAADK---LEPR-------QLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLP 380 (526)
T ss_dssp HHHHHTCCHHHHHH---CCCE-------EEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCccccc---CCce-------EEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhh
Confidence 444442211 1110 1111 12222112235567999999999999999999999999999888877653
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.90 E-value=7.2e-23 Score=223.27 Aligned_cols=299 Identities=12% Similarity=0.091 Sum_probs=169.6
Q ss_pred cccEEEEcch-HHHHHHHHHHh---CCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhh-----hc--
Q 008915 110 TFDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATA-----TK-- 178 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr---~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~-----~~-- 178 (549)
.+|||||||| +|+++|+.|++ +|++|+||||...+.......+.+.....+..+|+.+..-++.... ..
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~~ 81 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRFE 81 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEeccceec
Confidence 4899999986 59999999999 9999999999876543333345555666788888764210111100 00
Q ss_pred -cC---------CCcc------cc-----------------------------cC----Cccc----c----------cc
Q 008915 179 -FN---------PNRC------GF-----------------------------EG----KGEI----W----------VE 195 (549)
Q Consensus 179 -~~---------~~~i------~f-----------------------------~~----~~~l----~----------~~ 195 (549)
+. .+.+ .+ .. ...+ . ..
T Consensus 82 ~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 161 (511)
T 2weu_A 82 NWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQR 161 (511)
T ss_dssp SSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGCC
T ss_pred CCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccCc
Confidence 00 0000 00 00 0000 0 00
Q ss_pred --ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE--EEEEEcCCcEEEcCEEEEccCCChHHHH-HhcCC
Q 008915 196 --DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVK-QIRSG 270 (549)
Q Consensus 196 --~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg--v~V~~~dG~~i~ArlVI~ADG~~S~vrr-ql~~~ 270 (549)
...++.+++..|.+.|.+++.+.|++++.+ +|+++..++++ +.|.+++|++++||+||+|||.+|.+++ .++.+
T Consensus 162 ~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~ 240 (511)
T 2weu_A 162 AQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGR 240 (511)
T ss_dssp SCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred CCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 123467999999999999999999999999 99999886666 5677778888999999999999999854 44543
Q ss_pred C------CCCceeeEEeEeeeccCCC--ceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEccCCCCCccc
Q 008915 271 R------KPDGVCLVVGSCARGFKDN--STSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPK 342 (549)
Q Consensus 271 ~------~~~~~~~~vg~~~~g~~~~--~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~~~~~~~~~~ 342 (549)
. .+...+..+.. . .+.. ....... ... ..+++| .+|..+. ....+.+.........
T Consensus 241 ~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~---~~~-----~~g~~~-~~P~~~~----~~~g~~~~~~~~~~~~ 304 (511)
T 2weu_A 241 FQSFSDVLPNNRAVALRV--P-RENDEDMRPYTTA---TAM-----SAGWMW-TIPLFKR----DGNGYVYSDEFISPEE 304 (511)
T ss_dssp EEECTTTCCCCEEEEEEE--E-CSSGGGCCSSEEE---EEE-----TTEEEE-EEECSSE----EEEEEEECTTTSCHHH
T ss_pred CccccccCcccceEEEEe--c-cCCCCCCCcceec---eec-----CCCcEE-EEECCCc----eEEEEEECCCCCCHHH
Confidence 1 11111211111 1 1100 0000000 011 246788 7898742 2222233221111123
Q ss_pred HHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHH
Q 008915 343 LEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGV 422 (549)
Q Consensus 343 L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i 422 (549)
..+.+.+++...|.+ .+... ++.+.....++..+|+++||||||.++|++|+|++.++.++..|++.|
T Consensus 305 ~~~~l~~~~~~~~~~-----~~~~~-------~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l 372 (511)
T 2weu_A 305 AERELRSTVAPGRDD-----LEANH-------IQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHF 372 (511)
T ss_dssp HHHHHHHHHCTTCTT-----SCCEE-------EECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCccccc-----cccee-------EEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHh
Confidence 333344433322221 11111 122111122445699999999999999999999999999988877765
Q ss_pred HHHHhCCCCChhhhHhhhhhhh
Q 008915 423 YEAVRGDFVDSYSLSLLNPYMK 444 (549)
Q Consensus 423 ~~Al~~g~l~~~~l~~L~~Y~~ 444 (549)
. .+.... ..|+.|++
T Consensus 373 ~----~~~~~~---~~l~~Y~~ 387 (511)
T 2weu_A 373 P----GERWDP---VLISAYNE 387 (511)
T ss_dssp C----CTTCCH---HHHHHHHH
T ss_pred c----cCCCCH---HHHHHHHH
Confidence 4 222222 34567774
No 25
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.89 E-value=4.2e-22 Score=219.65 Aligned_cols=299 Identities=14% Similarity=0.108 Sum_probs=174.0
Q ss_pred cccEEEEcch-HHHHHHHHHHh---CCCcEEEEccCCCCCCCccccCCHHHHH-HHHHcCCCCcccchhhh-----hh--
Q 008915 110 TFDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELL-ELVESGILVEDDIDEAT-----AT-- 177 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr---~GlrVlLIEr~~~~~~~r~~~IS~~~l~-~L~~lGl~~~~eie~~i-----~~-- 177 (549)
.+|||||||| +|+++|+.|++ .|++|+|||+.+.+.......+.+.... .+..+|+.+..-+...- ..
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~~~ 104 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAIKF 104 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEeeeE
Confidence 6899999976 59999999999 9999999999876654333356667777 78888986431111110 00
Q ss_pred -ccCCC--------------cc---ccc--------------------CC-c-c----------cc---c---------c
Q 008915 178 -KFNPN--------------RC---GFE--------------------GK-G-E----------IW---V---------E 195 (549)
Q Consensus 178 -~~~~~--------------~i---~f~--------------------~~-~-~----------l~---~---------~ 195 (549)
.+... .. .|. +. . . +. . +
T Consensus 105 ~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (550)
T 2e4g_A 105 INWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGSKV 184 (550)
T ss_dssp ESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSCBC
T ss_pred eecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCCCC
Confidence 00000 00 000 00 0 0 00 0 0
Q ss_pred ccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEECCE--EEEEEcCCcEEEcCEEEEccCCChHH-HHHhcCCC
Q 008915 196 DILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPV-VKQIRSGR 271 (549)
Q Consensus 196 ~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dg--v~V~~~dG~~i~ArlVI~ADG~~S~v-rrql~~~~ 271 (549)
....+.+++..|.+.|.+++.+. |++++.+ +|+++..++++ +.|.+++|++++||+||+|||.+|.+ ++.++.+.
T Consensus 185 ~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~ 263 (550)
T 2e4g_A 185 TNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPF 263 (550)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCE
T ss_pred CCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCc
Confidence 12245689999999999999988 9999999 99999887665 56777788889999999999999998 44555432
Q ss_pred ------CCCceeeEEeEeeeccC--CCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEccCCCCCcccH
Q 008915 272 ------KPDGVCLVVGSCARGFK--DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKL 343 (549)
Q Consensus 272 ------~~~~~~~~vg~~~~g~~--~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~~~~~~~~~~L 343 (549)
.+...+..+........ ........ .. ..+++| .+|..+. ....+.+..........
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~g~~~-~ipl~~~----~~~g~v~~~~~~~~~~~ 328 (550)
T 2e4g_A 264 LDMSDHLLNDSAVATQVPHDDDANGVEPFTSAI-----AM-----KSGWTW-KIPMLGR----FGTGYVYSSRFATEDEA 328 (550)
T ss_dssp EECTTTCCCCEEEEEEEECCHHHHCCCSSEEEE-----EC-----SSEEEE-EEECSSE----EEEEEEECTTTSCHHHH
T ss_pred ccccccccccceEEEeecccCCcccCCCceeee-----ec-----CCceEE-EccCCCc----cceEEEEecCCCChHHH
Confidence 01111111111000000 00000000 00 247778 7888642 22233332211111233
Q ss_pred HHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHH
Q 008915 344 EELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 423 (549)
Q Consensus 344 ~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~ 423 (549)
.+.+.+++...|.+ .+.... +.......++..+|+++||||||.++|++|+|++.++.++..|++.|.
T Consensus 329 ~~~l~~~~~~~p~l-----~~~~~i-------~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~ 396 (550)
T 2e4g_A 329 VREFCEMWHLDPET-----QPLNRI-------RFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFP 396 (550)
T ss_dssp HHHHHHHTTCCTTT-----SCCEEE-------ECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhhCcCccc-----CCCceE-------EecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcc
Confidence 33344333222221 122211 111111224567999999999999999999999999999888876543
Q ss_pred HHHhCCCCChhhhHhhhhhh
Q 008915 424 EAVRGDFVDSYSLSLLNPYM 443 (549)
Q Consensus 424 ~Al~~g~l~~~~l~~L~~Y~ 443 (549)
.+.... ..|+.|+
T Consensus 397 ----~~~~~~---~~l~~Y~ 409 (550)
T 2e4g_A 397 ----DKSLNP---VLTARFN 409 (550)
T ss_dssp ----CTTCCH---HHHHHHH
T ss_pred ----ccCCCH---HHHHHHH
Confidence 332222 3456777
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.89 E-value=7.1e-22 Score=217.10 Aligned_cols=285 Identities=13% Similarity=0.090 Sum_probs=166.8
Q ss_pred cccEEEEcch-HHHHHHHHHHh---CCCcEEEEccCCCCCCCccccCCHHHHH-HHHHcCCCCcccchhhhhh-----cc
Q 008915 110 TFDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELL-ELVESGILVEDDIDEATAT-----KF 179 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr---~GlrVlLIEr~~~~~~~r~~~IS~~~l~-~L~~lGl~~~~eie~~i~~-----~~ 179 (549)
.+|||||||| +|+++|+.|++ .|++|+||||...++.....++++.... .+..+|+.+..-++..... .|
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~~ 84 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIKF 84 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCccc
Confidence 5899999976 59999999999 9999999999876654333456666777 7888887642111111000 00
Q ss_pred ---CC------CcccccCCc--------cc--------------c------------------------ccccccceeCH
Q 008915 180 ---NP------NRCGFEGKG--------EI--------------W------------------------VEDILNLGVSP 204 (549)
Q Consensus 180 ---~~------~~i~f~~~~--------~l--------------~------------------------~~~~l~~~V~~ 204 (549)
.. ....++... .+ . .+....+.+++
T Consensus 85 ~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~ 164 (538)
T 2aqj_A 85 VNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHFDA 164 (538)
T ss_dssp ESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEECH
T ss_pred cCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEEeH
Confidence 00 000000000 00 0 00112467899
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE--EEEEEcCCcEEEcCEEEEccCCChHHHH-HhcCCCC------CCc
Q 008915 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVK-QIRSGRK------PDG 275 (549)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg--v~V~~~dG~~i~ArlVI~ADG~~S~vrr-ql~~~~~------~~~ 275 (549)
..|.+.|.+.+.+.|++++.+ +|+++..++++ +.|.+++|++++||+||+|||.+|.+++ .++.+.. +..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~~ 243 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLLCD 243 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccccccccc
Confidence 999999999999999999999 89999886664 4677778888999999999999999854 3443310 011
Q ss_pred eeeEEeEeeecc-CCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEccCCCCCcccHHHHHHHHHHhC
Q 008915 276 VCLVVGSCARGF-KDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLERYWDLM 354 (549)
Q Consensus 276 ~~~~vg~~~~g~-~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~~~~~~~~~~L~~l~~~~~~~l 354 (549)
.+..+....... +........ . .. ..+++| .+|..++ ....+.+...........+.+.+++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~---~~-----~~g~~~-~~p~~~~----~~~g~v~~~~~~~~~~~~~~l~~~~~~~ 309 (538)
T 2aqj_A 244 SAVASAVPNDDARDGVEPYTSS-I---AM-----NSGWTW-KIPMLGR----FGSGYVFSSHFTSRDQATADFLKLWGLS 309 (538)
T ss_dssp EEEEEEEECCHHHHCCCSSEEE-E---EC-----SSEEEE-EEEETTE----EEEEEEECTTTSCHHHHHHHHHHHHTCC
T ss_pred eEEEEecccCCcccCCCCceee-e---ec-----CCceEE-EecCCCc----eEEEEEEcCCCCChHHHHHHHHHHhcCC
Confidence 111111100000 000000000 0 11 246888 7898753 2222223221111123334444443221
Q ss_pred cccccccCCceeEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHH
Q 008915 355 PEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGV 422 (549)
Q Consensus 355 p~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i 422 (549)
| +.+... ++.......++..+|++|||||||.++|++|+|+++++.|+..|++.|
T Consensus 310 ~------~~~~~~-------~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L 364 (538)
T 2aqj_A 310 D------NQPLNQ-------IKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHF 364 (538)
T ss_dssp T------TCCCEE-------EECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTC
T ss_pred C------CCCceE-------EeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHh
Confidence 1 111111 222211223567799999999999999999999999999988777654
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.85 E-value=2.7e-21 Score=203.05 Aligned_cols=293 Identities=12% Similarity=0.047 Sum_probs=157.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCC-ccccCCHHHHHHHHHcCCCCcccchhhhhhcc-CCCccc
Q 008915 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGRE-QEWNISRKELLELVESGILVEDDIDEATATKF-NPNRCG 185 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~-r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~-~~~~i~ 185 (549)
.||+||||| +|+++|+.|+++ |++|+|+||.+.++.. ....++++.+..+...+++. +..+...+ ....+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYL----DAPERLNPQFLEDFK 76 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGS----SCGGGGCCEEECCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhh----hhhHHHhhccccceE
Confidence 389999976 599999999999 9999999998876422 22233333222111112220 11011101 000111
Q ss_pred cc-CCcccccc-ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 186 FE-GKGEIWVE-DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 186 f~-~~~~l~~~-~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
+. .+..+... ....+.+++..|.+.|.+++.+.|++++.+++|+++... .+++||+||+|||.+|.
T Consensus 77 ~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~- 144 (381)
T 3c4a_A 77 LVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK- 144 (381)
T ss_dssp EEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-
T ss_pred EEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-
Confidence 11 11111110 111246899999999999999889999999999887431 13689999999999999
Q ss_pred HHHhcC--CCCCCceeeEEeEeeeccC-CCceeeeeecCCcccccCCCCceeEE-EEecCCCCCccceEEEEEccC----
Q 008915 264 VKQIRS--GRKPDGVCLVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEVQLFW-EAFPAGSGPLDRTTYMFTYID---- 335 (549)
Q Consensus 264 rrql~~--~~~~~~~~~~vg~~~~g~~-~~~~~ei~~~~~~~~~~~~~~~~~~W-~~fP~~~g~~~~~~~l~~~~~---- 335 (549)
|+++.. +...... .......+.. ..+.....+. .. ..+++| ..||.+++ ...+++...+
T Consensus 145 R~~l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~-----~~g~~~~~~~p~~~~---~~~~~~~~~~~~~~ 211 (381)
T 3c4a_A 145 TAHFTEALVPQVDYG--RNKYIWYGTSQLFDQMNLVFR---TH-----GKDIFIAHAYKYSDT---MSTFIVECSEETYA 211 (381)
T ss_dssp TCCSSGGGCCCCEEE--EEEEEEEEESSCCSSEEEEEE---EE-----TTEEEEEEEEECSSS---CEEEEEEECHHHHH
T ss_pred HHhhhhhcCCCcccC--CccEEEEecCCCCCcceeeEe---eC-----CCcEEEEEEEEecCC---eEEEEEECCccccc
Confidence 877631 1111111 1111111211 1111111111 01 234443 46888765 2333322211
Q ss_pred ---CCC-CcccHHHHHHH-HHHhCcccccccCCceeEeeeeeeeecccc-CCCCCccCCcEEEeCCCCCCCCCCCCCchh
Q 008915 336 ---PQA-GSPKLEELLER-YWDLMPEYQGVTLDNLEIQRVIYGIFPTYR-DSPLPAAFNRILQFGDASGIQSPVSFGGFG 409 (549)
Q Consensus 336 ---~~~-~~~~L~~l~~~-~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~-~~~~~~~~~rvlLVGDAA~~v~Pltg~G~g 409 (549)
... ......+.+.+ |....|..+-+ +...+ .+|.+. ....++..+|++|||||||.++|++|||+|
T Consensus 212 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~--~~~~~------~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~ 283 (381)
T 3c4a_A 212 RARLGEMSEEASAEYVAKVFQAELGGHGLV--SQPGL------GWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTT 283 (381)
T ss_dssp HTTSSSSCHHHHHHHHHHHTHHHHTTCCCB--CCTTT------CSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHH
T ss_pred cCCcccCChHHHHHHHHHHhcccCCCchhh--cCCCc------ceeeeccccCCCcccCCEEEEEccccccCCCccccHH
Confidence 000 11122222332 22222332111 11100 122221 123356779999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhhcCc
Q 008915 410 SLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMKLGD 447 (549)
Q Consensus 410 ~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~l~d 447 (549)
++++|+..|++.|..+ + + ....|+.|++...
T Consensus 284 ~al~Da~~La~~L~~~---~--~--~~~aL~~Y~~~r~ 314 (381)
T 3c4a_A 284 MAVVVAQLLVKALCTE---D--G--VPAALKRFEERAL 314 (381)
T ss_dssp HHHHHHHHHHHHHHHS---S--S--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc---c--c--HHHHHHHHHHHHH
Confidence 9999999999988763 2 1 2345789995443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.76 E-value=2.8e-18 Score=183.29 Aligned_cols=299 Identities=14% Similarity=0.131 Sum_probs=154.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC--Ccc---ccCCHHHHHHHHHcCC--CCcc--cchhhhhhc
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR--EQE---WNISRKELLELVESGI--LVED--DIDEATATK 178 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~--~r~---~~IS~~~l~~L~~lGl--~~~~--eie~~i~~~ 178 (549)
..+||+||||| +|+++|+.|+++|++|+||||.+.+.. .+. ..+....+..+..+|+ |... .++......
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 100 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGYFGHYYYV 100 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccccceeEEE
Confidence 35899999976 599999999999999999999874321 111 1234556667777765 3210 000000000
Q ss_pred cCCCcccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCc-eEEEEEEECCEEEEEEcCCcEEEcCEEEEcc
Q 008915 179 FNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGY-SVSSICTYENAAVLLLAEGKILSSHLIIDAM 257 (549)
Q Consensus 179 ~~~~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t-~v~~i~~~~dgv~V~~~dG~~i~ArlVI~AD 257 (549)
..+..+.|.+ .+ ....+.|++..+...|.+++.+.|++++... ++.++ +....++++||+||
T Consensus 101 ~~~~~~~~~~--~~---~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l------------~~~~~~ad~VV~Ad 163 (430)
T 3ihm_A 101 GGPQPMRFYG--DL---KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDL------------EGLSEQYDLLVVCT 163 (430)
T ss_dssp CSSSCEEEEE--EE---EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGH------------HHHHTTSSEEEECC
T ss_pred CCCCccccch--hc---CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhh------------hhhcccCCEEEECC
Confidence 0111112211 11 1234678999999999999999999887632 11111 00113689999999
Q ss_pred CCChHHHHHhcCC---CCCCc--eeeEEeEeeeccCCCceeeeeecCCcccccCCCCceeEEEEecC--CCCCccceEEE
Q 008915 258 GNFSPVVKQIRSG---RKPDG--VCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPA--GSGPLDRTTYM 330 (549)
Q Consensus 258 G~~S~vrrql~~~---~~~~~--~~~~vg~~~~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~--~~g~~~~~~~l 330 (549)
|.+|.++. +... .+++. .... .....++...+...+.+. +.+ +.+.+| .+|. .++. ...++
T Consensus 164 G~~S~~~~-~~~~~~~~~~~~p~r~~~-~~~~~g~~~~~~~~~~~~---~~~----~~G~~~-~~p~~~~~g~--~~~~~ 231 (430)
T 3ihm_A 164 GKYALGKV-FEKQSENSPFEKPQRALC-VGLFKGIKEAPIRAVTMS---FSP----GHGELI-EIPTLSFNGM--STALV 231 (430)
T ss_dssp CCTTGGGG-SCBCGGGCCCSSCSSEEE-EEEEESBCCCSSCCEEEE---EET----TTEEEE-EEEEEETTEE--EEEEE
T ss_pred CCcchHHh-ccCCCCCCcccCCCeeEE-EEEEccCCCCCcCeeeee---ecC----CCcceE-EecccCCCcc--eEEEE
Confidence 99998763 2211 11111 1111 112222221111111110 000 123334 3443 2221 12222
Q ss_pred EEccCCCC----------Ccc--cHHHHHHHHHHhCcccccccCCcee--E----eee-eeeeeccccCCCCCccCCcEE
Q 008915 331 FTYIDPQA----------GSP--KLEELLERYWDLMPEYQGVTLDNLE--I----QRV-IYGIFPTYRDSPLPAAFNRIL 391 (549)
Q Consensus 331 ~~~~~~~~----------~~~--~L~~l~~~~~~~lp~~~~~~l~~~~--~----~r~-~~g~~P~~~~~~~~~~~~rvl 391 (549)
+...+... ..+ .++++.+.|....|..... +.... . ... ...++|.......++..+|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (430)
T 3ihm_A 232 LENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAER-IDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTI 310 (430)
T ss_dssp EEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTT-BCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEE
T ss_pred EEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHH-HhhchhccccCccceeecceeecccccccccCCCCEE
Confidence 22211100 011 1234444444445554332 22222 0 000 112345443323355678888
Q ss_pred E-eCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHhCCCCChhhhHhhhhhhh
Q 008915 392 Q-FGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMK 444 (549)
Q Consensus 392 L-VGDAA~~v~Pltg~G~g~~lrd~~~La~~i~~Al~~g~l~~~~l~~L~~Y~~ 444 (549)
| +|||||.++|++|||+|.+++|+..|++.|... ++++ ..|..|+.
T Consensus 311 ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~~~~----~~~~~~~~ 357 (430)
T 3ihm_A 311 IGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---SVYD----LRFSEHLE 357 (430)
T ss_dssp EECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---SCCS----HHHHHHHH
T ss_pred EEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---CCHH----HHHHHHHH
Confidence 8 999999999999999999999999999988764 3322 33567863
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.68 E-value=3.6e-16 Score=170.20 Aligned_cols=137 Identities=19% Similarity=0.138 Sum_probs=105.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.+||+||||| +|+++|..|+++|++|+||||.+..+..+..++++..++.|..+|++... .. |..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~-------~~-------~~~ 157 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFY-------GR-------FCT 157 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHC-------TT-------TTC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccc-------cc-------ccc
Confidence 6999999976 59999999999999999999998766555567788888888887764210 01 110
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE---CCEEEEEE--c-CC--cEEEcCEEEEccCCC
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY---ENAAVLLL--A-EG--KILSSHLIIDAMGNF 260 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~---~dgv~V~~--~-dG--~~i~ArlVI~ADG~~ 260 (549)
..+ ..+++..+.+.|.+.+.+.|++++.+++|+++..+ ++++.|++ . +| .+++||+||+|||.+
T Consensus 158 -~~~-------~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 158 -GTL-------DHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp -TTC-------CEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred -ccc-------ccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 011 23567788999999998889999999999999864 34667776 3 55 479999999999999
Q ss_pred hHHHHHhc
Q 008915 261 SPVVKQIR 268 (549)
Q Consensus 261 S~vrrql~ 268 (549)
|.+++..+
T Consensus 230 S~~r~~~~ 237 (497)
T 2bry_A 230 FVPEGFTI 237 (497)
T ss_dssp CCCTTCEE
T ss_pred cccccccc
Confidence 99886543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.68 E-value=7.3e-15 Score=150.10 Aligned_cols=284 Identities=14% Similarity=0.082 Sum_probs=144.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCC-------------cc--c-cCCHHHHHHHHHc---CCCCcc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGRE-------------QE--W-NISRKELLELVES---GILVED 169 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~-------------r~--~-~IS~~~l~~L~~l---Gl~~~~ 169 (549)
++||+||||| +|+++|+.|+++|++|+||||.+.++.. +. + ..+....+.+..+ +..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHV--- 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSE---
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCe---
Confidence 4799999976 5999999999999999999998765310 00 0 0112222222211 111
Q ss_pred cchhhhhhccCCCcccccCCccccc--cccccce--eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC
Q 008915 170 DIDEATATKFNPNRCGFEGKGEIWV--EDILNLG--VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG 245 (549)
Q Consensus 170 eie~~i~~~~~~~~i~f~~~~~l~~--~~~l~~~--V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG 245 (549)
..+......+.. ..+.. .....+. ..... |.+++.+ |++++.+++|+++..++++++|++++|
T Consensus 79 -------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----l~~~l~~-g~~i~~~~~v~~i~~~~~~~~v~~~~g 145 (336)
T 1yvv_A 79 -------AEWTPLLYNFHA-GRLSPSPDEQVRWVGKPGMSA----ITRAMRG-DMPVSFSCRITEVFRGEEHWNLLDAEG 145 (336)
T ss_dssp -------EEECCCEEEESS-SBCCCCCTTSCEEEESSCTHH----HHHHHHT-TCCEECSCCEEEEEECSSCEEEEETTS
T ss_pred -------eeccccceeccC-cccccCCCCCccEEcCccHHH----HHHHHHc-cCcEEecCEEEEEEEeCCEEEEEeCCC
Confidence 001100000000 00000 0000011 11122 3333333 789999999999999999999999888
Q ss_pred cEE-EcCEEEEccCCChHHHHHhcC--------CCCCCceeeEEeEeeeccCCCceeeeeecCCcccccCCCCceeEEEE
Q 008915 246 KIL-SSHLIIDAMGNFSPVVKQIRS--------GRKPDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEA 316 (549)
Q Consensus 246 ~~i-~ArlVI~ADG~~S~vrrql~~--------~~~~~~~~~~vg~~~~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~ 316 (549)
+.+ +|++||.|+|..|.++..... ..++. .+.++......-.......++...+ ..+++|..
T Consensus 146 ~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~ 216 (336)
T 1yvv_A 146 QNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMD-PTWAVALAFETPLQTPMQGCFVQDS--------PLDWLARN 216 (336)
T ss_dssp CEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEE-EEEEEEEEESSCCSCCCCEEEECSS--------SEEEEEEG
T ss_pred cCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCcc-ceeEEEEEecCCCCCCCCeEEeCCC--------ceeEEEec
Confidence 766 499999999999987643211 11221 2222222111101111222222111 12333211
Q ss_pred --ecCCCCCccceEEEEEccC-----CCC-Cc-ccHHHHHHHHHHhCcccccccCCceeEeeeeeeeeccccCCCCCc--
Q 008915 317 --FPAGSGPLDRTTYMFTYID-----PQA-GS-PKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPA-- 385 (549)
Q Consensus 317 --fP~~~g~~~~~~~l~~~~~-----~~~-~~-~~L~~l~~~~~~~lp~~~~~~l~~~~~~r~~~g~~P~~~~~~~~~-- 385 (549)
+|..++ ....+++.... ... .. ...+++.+.+.+.++.- ..........+..+ .+|.+.......
T Consensus 217 ~~~p~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~-~~~p~~~~~~rw~~-a~~~~~~~~~~~~~ 292 (336)
T 1yvv_A 217 RSKPERDD--TLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLY-ARPAGAHEWGALSD 292 (336)
T ss_dssp GGSTTCCC--SSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEE-EEESSCCCCSCEEE
T ss_pred CcCCCCCC--CCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCC-CCCCcEEEccccCc-cCCCCCCCCCeeec
Confidence 344432 11334433211 001 11 13444555555555421 00001122233332 245554322222
Q ss_pred cCCcEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHhC
Q 008915 386 AFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 428 (549)
Q Consensus 386 ~~~rvlLVGDAA~~v~Pltg~G~g~~lrd~~~La~~i~~Al~~ 428 (549)
..+|++|+|||+| +.|++.+++++.++++.|.+.+..
T Consensus 293 ~~~rl~laGDa~~------g~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 293 ADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecCCC------CCCHHHHHHHHHHHHHHHHHHhhh
Confidence 3489999999996 359999999999999998887653
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.53 E-value=3.7e-13 Score=139.98 Aligned_cols=70 Identities=23% Similarity=0.204 Sum_probs=60.7
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH-HHHHhcCC
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIRSG 270 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~-vrrql~~~ 270 (549)
..+++..+.+.|.+.+.+.|++++.+++|+++..+++++.|.+++| +++|+.||.|+|..|. +.+.++..
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~ 229 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLN 229 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCC
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCC
Confidence 4578899999999999999999999999999988878887877666 8999999999999987 77776543
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.46 E-value=6.1e-12 Score=131.70 Aligned_cols=71 Identities=8% Similarity=-0.023 Sum_probs=59.7
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EEEEEcCCcEEEcCEEEEccCCCh-HHHHHhcCCC
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFS-PVVKQIRSGR 271 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~dG~~i~ArlVI~ADG~~S-~vrrql~~~~ 271 (549)
..+++..+.+.|.+++.+.|++++.+++|+++..+++. +.|.+++| +++||.||.|+|..| .+++.++...
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~ 241 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFEL 241 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCC
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCC
Confidence 45788899999999999999999999999999887665 45777667 799999999999999 5777776543
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.43 E-value=3.3e-11 Score=125.39 Aligned_cols=70 Identities=11% Similarity=0.147 Sum_probs=60.5
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEcCCcEEEcCEEEEccCCChH-HHHHhcCC
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP-VVKQIRSG 270 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~ADG~~S~-vrrql~~~ 270 (549)
..+++..+.+.|.+++.+.|++++.+++|+++..++++++ |.+.+| +++||.||.|+|..|. +.+.++..
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIK 215 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCC
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCC
Confidence 3578999999999999999999999999999998888877 887666 7999999999999994 66666644
No 34
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.41 E-value=6.6e-11 Score=123.92 Aligned_cols=68 Identities=9% Similarity=0.180 Sum_probs=59.1
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh-HHHHHhcC
Q 008915 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS-PVVKQIRS 269 (549)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S-~vrrql~~ 269 (549)
.+++..+.+.|.+++.+.|++++.+++|+++..++++++|.++++ +++|+.||.|+|.+| .++++++.
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~ 217 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGA 217 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTC
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCC
Confidence 578888999999999999999999999999999888888877555 799999999999995 47777764
No 35
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.39 E-value=1.1e-10 Score=126.73 Aligned_cols=202 Identities=14% Similarity=0.146 Sum_probs=112.8
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc---CCc--EEEcCEEEEccCCChH-HHHH-hcCCCCC
Q 008915 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHLIIDAMGNFSP-VVKQ-IRSGRKP 273 (549)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---dG~--~i~ArlVI~ADG~~S~-vrrq-l~~~~~~ 273 (549)
.+++..+...|.+.+.+.|++++.+++|+++..+++.+.|.+. +|+ +++||.||.|+|.+|. +.++ ++.....
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~ 224 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPY 224 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSS
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCccc
Confidence 4799999999999999999999999999999988876667763 565 7999999999999997 4444 5432111
Q ss_pred CceeeEEeEee--eccCCCceeeeeecCCcccccCCCCceeEEEEecCCCCCccceEEEEEccC--------CCCCcccH
Q 008915 274 DGVCLVVGSCA--RGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYID--------PQAGSPKL 343 (549)
Q Consensus 274 ~~~~~~vg~~~--~g~~~~~~~ei~~~~~~~~~~~~~~~~~~W~~fP~~~g~~~~~~~l~~~~~--------~~~~~~~L 343 (549)
.+.++-|... ........ .+++. .. ....+| ++|..++ ...+.+... ........
T Consensus 225 -~i~p~rG~~~~~~~~~~~~~-~~~~~---~~-----dg~~~~-~~P~~~g----~~~iG~t~~~~~~~~~~~~~~~~~~ 289 (501)
T 2qcu_A 225 -GIRLIKGSHIVVPRVHTQKQ-AYILQ---NE-----DKRIVF-VIPWMDE----FSIIGTTDVEYKGDPKAVKIEESEI 289 (501)
T ss_dssp -CBCCEEEEEEEEECSSSCSC-EEEEE---CT-----TSCEEE-EEEETTT----EEEEECCCEECCSCGGGCCCCHHHH
T ss_pred -ccccceeEEEEECCCCCCce-EEEee---cC-----CCCEEE-EEEcCCC----cEEEcCCCCCCCCCcCCCCCCHHHH
Confidence 1222212111 11001111 11111 00 123344 6776644 223322211 01111245
Q ss_pred HHHHHHHHHhCc-ccccccCCceeEeeeeeeeeccccCCC---CCccCCcEEE--eCCCCCCCCCCCCCchhhHHHHHHH
Q 008915 344 EELLERYWDLMP-EYQGVTLDNLEIQRVIYGIFPTYRDSP---LPAAFNRILQ--FGDASGIQSPVSFGGFGSLTRHLGR 417 (549)
Q Consensus 344 ~~l~~~~~~~lp-~~~~~~l~~~~~~r~~~g~~P~~~~~~---~~~~~~rvlL--VGDAA~~v~Pltg~G~g~~lrd~~~ 417 (549)
+.+++...+.+| .+.. ..+.+.-.|..|...... .+...+.++. .+|..+.+-.++|+|+-.. ..
T Consensus 290 ~~l~~~~~~~~p~~l~~-----~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~----~~ 360 (501)
T 2qcu_A 290 NYLLNVYNTHFKKQLSR-----DDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTY----RK 360 (501)
T ss_dssp HHHHHHHHHHBSSCCCG-----GGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGH----HH
T ss_pred HHHHHHHHHhcCCCCCc-----ccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccch----HH
Confidence 566666666777 4432 222333346677654221 1334567777 6776666667787775443 23
Q ss_pred HHHHHHHHH
Q 008915 418 LSTGVYEAV 426 (549)
Q Consensus 418 La~~i~~Al 426 (549)
+|+.+...+
T Consensus 361 ~Ae~~~~~~ 369 (501)
T 2qcu_A 361 LAEHALEKL 369 (501)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455444444
No 36
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.34 E-value=9.5e-11 Score=121.90 Aligned_cols=67 Identities=12% Similarity=0.188 Sum_probs=57.3
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH-HHHHhc
Q 008915 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIR 268 (549)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~-vrrql~ 268 (549)
.+++..+.+.|.+++++.|++++.+++|+++..+++++.|.+++| +++|+.||.|+|..|. +...++
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT
T ss_pred EEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc
Confidence 467889999999999999999999999999998888888887555 7999999999999986 444444
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.30 E-value=4e-11 Score=123.22 Aligned_cols=71 Identities=17% Similarity=0.086 Sum_probs=61.4
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EEEEEcCC--cEEEcCEEEEccCCChH-HHHHh-cCC
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEG--KILSSHLIIDAMGNFSP-VVKQI-RSG 270 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~dG--~~i~ArlVI~ADG~~S~-vrrql-~~~ 270 (549)
..+++..+.+.|.+++++.|++++++++|+++..++++ +.|.+++| .+++||.||.|+|.+|. +.+++ +..
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 35789999999999999999999999999999988776 88888777 48999999999999994 67777 553
No 38
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.27 E-value=6.6e-11 Score=125.71 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=57.8
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCc---eEEEEEEECCEEE-EEEcCCcEEEcCEEEEccCCChH
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGY---SVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t---~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
..+++..+.+.|.+++++.|+++++++ +|+++..++++++ |.+.+|++++|+.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 457888999999999999999999999 9999999888888 88888888999999999999985
No 39
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.27 E-value=1.6e-11 Score=131.54 Aligned_cols=158 Identities=20% Similarity=0.225 Sum_probs=97.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCc-----c-ccCCH-HHH-HHHHHcCCCCcccchhhhhhccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQ-----E-WNISR-KEL-LELVESGILVEDDIDEATATKFN 180 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r-----~-~~IS~-~~l-~~L~~lGl~~~~eie~~i~~~~~ 180 (549)
+||||||||| +|+++|+.|+++|++|+||||.+.++.+- . .+++. ... ..+..++.... -....+ ..+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~ 103 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGR-FLYSAF-SIFN 103 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGG-GGHHHH-HHSC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChH-HHHHHH-HhcC
Confidence 6999999976 69999999999999999999987654210 0 01100 001 11111111000 000000 0010
Q ss_pred CC-cccc-cC-Ccccccccccccee----CHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EEEEEcCCcEEEcCE
Q 008915 181 PN-RCGF-EG-KGEIWVEDILNLGV----SPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHL 252 (549)
Q Consensus 181 ~~-~i~f-~~-~~~l~~~~~l~~~V----~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~dG~~i~Arl 252 (549)
.. .+.+ .. +.++.. ...+..+ ....+.+.|.+++.+.|++++.+++|+++..++++ +.|.+.+|++++|+.
T Consensus 104 ~~~~~~~~~~~G~~~~~-~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~ 182 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKE-EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNH 182 (447)
T ss_dssp HHHHHHHHHHTTCCEEE-CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSC
T ss_pred HHHHHHHHHhcCCceEE-eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCE
Confidence 00 0000 00 000000 0011111 35678889999999999999999999999988777 668887887899999
Q ss_pred EEEccCCCh-----------HHHHHhcCC
Q 008915 253 IIDAMGNFS-----------PVVKQIRSG 270 (549)
Q Consensus 253 VI~ADG~~S-----------~vrrql~~~ 270 (549)
||.|+|..| .++++++..
T Consensus 183 VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 183 VVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp EEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred EEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 999999999 888888764
No 40
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.26 E-value=3.8e-11 Score=127.75 Aligned_cols=150 Identities=15% Similarity=0.220 Sum_probs=95.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCc------cccCC-----HHH---------HHHHHHcCCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQ------EWNIS-----RKE---------LLELVESGILV 167 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r------~~~IS-----~~~---------l~~L~~lGl~~ 167 (549)
.+||||||||| +|+++|+.|+++|++|+||||.+.++.+- ..+++ ... ...+.....
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~-- 103 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP-- 103 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH--
Confidence 36999999976 59999999999999999999998654210 00000 000 000000000
Q ss_pred cccchhhhhhccCCCcccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcE
Q 008915 168 EDDIDEATATKFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKI 247 (549)
Q Consensus 168 ~~eie~~i~~~~~~~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~ 247 (549)
.++..... +. .+.+.... ....+ ...++..+.+.|.+.+.+.|++++.+++|+++..+++++.|.+.+| +
T Consensus 104 -~~~~~~~~-~~---Gi~~~~~~---~g~~~-~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~ 173 (417)
T 3v76_A 104 -QDFVALVE-RH---GIGWHEKT---LGQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-T 173 (417)
T ss_dssp -HHHHHHHH-HT---TCCEEECS---TTEEE-ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-E
T ss_pred -HHHHHHHH-Hc---CCCcEEee---CCEEe-eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-E
Confidence 00000000 00 00000000 00000 1245678889999999999999999999999999999999998777 8
Q ss_pred EEcCEEEEccCCCh-----------HHHHHhcCC
Q 008915 248 LSSHLIIDAMGNFS-----------PVVKQIRSG 270 (549)
Q Consensus 248 i~ArlVI~ADG~~S-----------~vrrql~~~ 270 (549)
++||.||.|+|..| .++++++..
T Consensus 174 i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 174 VDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp EEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred EEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 99999999999999 577777654
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.26 E-value=1.6e-10 Score=130.46 Aligned_cols=63 Identities=13% Similarity=0.051 Sum_probs=56.9
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCc-EEEcCEEEEccCCChH
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~-~i~ArlVI~ADG~~S~ 262 (549)
..+++..+.+.|.+++.+.|++++++++|+++..+++++.|.+.+|. +++|+.||.|+|..|.
T Consensus 407 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 45789999999999999999999999999999998888988887877 8999999999999986
No 42
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.24 E-value=8.6e-11 Score=129.01 Aligned_cols=60 Identities=22% Similarity=0.319 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEcCCcEEEcCEEEEccCCChH
Q 008915 203 SPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 203 ~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
....+.+.|.+.+.+.|++++.+++|+++..+++.+. |++++|++++|++||.|+|+.|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 3456778899999889999999999999988777654 88888889999999999999995
No 43
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.20 E-value=4e-09 Score=116.24 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=58.1
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEcC---C--cEEEcCEEEEccCCChH-HHHHhcCC
Q 008915 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAE---G--KILSSHLIIDAMGNFSP-VVKQIRSG 270 (549)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~d---G--~~i~ArlVI~ADG~~S~-vrrql~~~ 270 (549)
.+++..+...|.+.+.+.|++++.+++|+++..+++++. |.+.+ | .+++||.||.|+|.+|. +++.++..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 588999999999999999999999999999999888653 55543 3 37999999999999994 66666543
No 44
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.17 E-value=2.2e-10 Score=118.54 Aligned_cols=70 Identities=10% Similarity=0.090 Sum_probs=61.8
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH-HHHHhcCC
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIRSG 270 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~-vrrql~~~ 270 (549)
..+++..+.+.|.+.+++.|++++++++|+++..+++++.|++++| +++|+.||.|+|.+|. +.+.++..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3589999999999999999999999999999999999988888766 8999999999999995 66777653
No 45
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.16 E-value=2.3e-10 Score=128.91 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=58.3
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
..+++..+.+.|.+++.+.|++++++++|+++..+++++.|++.+|.+++|+.||.|+|..|.
T Consensus 412 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred eeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 457899999999999999999999999999999999999998888888999999999999986
No 46
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.15 E-value=3e-10 Score=117.46 Aligned_cols=62 Identities=13% Similarity=0.061 Sum_probs=54.9
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
..+++..+.+.|.+.+.+.|++++.+++|+++..+++++.|++++| +++|+.||.|+|.+|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 3478889999999999999999999999999998888888888666 5999999999999884
No 47
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.14 E-value=4.9e-10 Score=104.27 Aligned_cols=117 Identities=18% Similarity=0.228 Sum_probs=88.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.|||+||||| +|+.+|..|++.|.+|+|||+.+..-. +. ..+. .+ .+
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~-~~-------------------~~~~-----~~-------~~ 48 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVK-GV-------------------SRVP-----NY-------PG 48 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTT-TC-------------------SCCC-----CS-------TT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccc-Cc-------------------hhhh-----cc-------CC
Confidence 3899999976 599999999999999999998762100 00 0000 00 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHHHHHhc
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQIR 268 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~vrrql~ 268 (549)
.+ ..++...+.+.+.+.+.+.|++++.+ +|+++..+++++.|++++| +++||.||.|+|..|.+++.++
T Consensus 49 -----~~----~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g 117 (180)
T 2ywl_A 49 -----LL----DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLG 117 (180)
T ss_dssp -----CT----TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHT
T ss_pred -----Cc----CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccccCC
Confidence 00 11345678888899998999999999 9999988878888888778 8999999999999998877775
Q ss_pred C
Q 008915 269 S 269 (549)
Q Consensus 269 ~ 269 (549)
.
T Consensus 118 ~ 118 (180)
T 2ywl_A 118 L 118 (180)
T ss_dssp C
T ss_pred C
Confidence 3
No 48
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.13 E-value=1.8e-10 Score=118.90 Aligned_cols=131 Identities=21% Similarity=0.299 Sum_probs=86.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccc---------cCCHHHHHHHHHcCCCCcccchhhhhh
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEW---------NISRKELLELVESGILVEDDIDEATAT 177 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~---------~IS~~~l~~L~~lGl~~~~eie~~i~~ 177 (549)
+||||||||| +|+++|+.|+++ |++|+||||...++.. .| .+.+.....|.++|+...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg-~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~--------- 148 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG-AWLGGQLFSAMVMRKPADVFLDEVGVPYE--------- 148 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT-TTCCBTTCCCEEEETTTHHHHHHHTCCCE---------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc-cccCCccchhhhcchHHHHHHHHcCCccc---------
Confidence 6999999975 599999999997 9999999998765421 11 111223344444444210
Q ss_pred ccCCCcccccCCccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECC--------------------
Q 008915 178 KFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYEN-------------------- 236 (549)
Q Consensus 178 ~~~~~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~d-------------------- 236 (549)
. ...+. ...+...+.+.|.+++.+ .|++++.++.++++..+++
T Consensus 149 ~----------~G~~~------~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~r 212 (344)
T 3jsk_A 149 D----------EGDYV------VVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVR 212 (344)
T ss_dssp E----------CSSEE------EESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEE
T ss_pred c----------cCCeE------EEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCce
Confidence 0 00001 011245667888888887 4889999999999987663
Q ss_pred --EEEEEE----cC--------CcEEEcCEEEEccCCChHHHHH
Q 008915 237 --AAVLLL----AE--------GKILSSHLIIDAMGNFSPVVKQ 266 (549)
Q Consensus 237 --gv~V~~----~d--------G~~i~ArlVI~ADG~~S~vrrq 266 (549)
++++.. .+ ..+|+|++||+|+|+.|++++.
T Consensus 213 V~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~ 256 (344)
T 3jsk_A 213 IAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAF 256 (344)
T ss_dssp EEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCH
T ss_pred EeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHH
Confidence 222321 12 2479999999999999996543
No 49
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.11 E-value=1.2e-10 Score=122.90 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=54.8
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEE---------EEEEECCEEEEEEcCCcEEEcCEEEEccCCCh-HHHH-Hhc
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVS---------SICTYENAAVLLLAEGKILSSHLIIDAMGNFS-PVVK-QIR 268 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~---------~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S-~vrr-ql~ 268 (549)
..+++..+.+.|.+++.+.|++++++++|+ ++..+++++.|.+.+| +++||.||.|+|.+| .+++ +++
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g 245 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLG 245 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHC
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcC
Confidence 357899999999999999999999999999 8877767776666555 799999999999999 6877 776
Q ss_pred CCC
Q 008915 269 SGR 271 (549)
Q Consensus 269 ~~~ 271 (549)
...
T Consensus 246 ~~~ 248 (405)
T 3c4n_A 246 LHT 248 (405)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 50
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.10 E-value=4.6e-10 Score=112.91 Aligned_cols=131 Identities=17% Similarity=0.312 Sum_probs=86.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhC-CCcEEEEccCCCCCCCcccc---------CCHHHHHHHHHcCCCCcccchhhhhhc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK-GLRVAIVERNTLKGREQEWN---------ISRKELLELVESGILVEDDIDEATATK 178 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~-GlrVlLIEr~~~~~~~r~~~---------IS~~~l~~L~~lGl~~~~eie~~i~~~ 178 (549)
+|||+||||| +|+++|..|+++ |++|+||||.+.++.. .|. +.....+.|.++|+.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~-~~~~~~~~~~~~~~~~~~~~l~~~G~~------------ 105 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG-AWLGGQLFSAMIVRKPAHLFLDEIGVA------------ 105 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT-TTCCSTTCCCEEEETTTHHHHHHHTCC------------
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc-eecCCcchHHHHcCcHHHHHHHHcCCC------------
Confidence 5999999976 599999999997 9999999998765421 111 000112222222221
Q ss_pred cCCCcccccCCccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEE-EEEEc---------CC--
Q 008915 179 FNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---------EG-- 245 (549)
Q Consensus 179 ~~~~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv-~V~~~---------dG-- 245 (549)
|..... +....+...+...|.+++.+ .|++++.+++|+++..+++.+ .|.+. +|
T Consensus 106 -------~~~~~~------~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~ 172 (284)
T 1rp0_A 106 -------YDEQDT------YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSC 172 (284)
T ss_dssp -------CEECSS------EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSC
T ss_pred -------cccCCC------EEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCcccc
Confidence 100000 00112566778888888876 589999999999999887754 23331 22
Q ss_pred ---cEEEcCEEEEccCCChHHHHH
Q 008915 246 ---KILSSHLIIDAMGNFSPVVKQ 266 (549)
Q Consensus 246 ---~~i~ArlVI~ADG~~S~vrrq 266 (549)
.+++||.||.|+|..|.++..
T Consensus 173 g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 173 MDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp CCCEEEEEEEEEECCCSSSTTTTH
T ss_pred CceEEEECCEEEECCCCchHHHHH
Confidence 579999999999999987643
No 51
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.10 E-value=6e-10 Score=117.83 Aligned_cols=156 Identities=17% Similarity=0.188 Sum_probs=92.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCC-----C-ccc-chhhhhhccCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGIL-----V-EDD-IDEATATKFNP 181 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~-----~-~~e-ie~~i~~~~~~ 181 (549)
+||||||||| +|+++|+.|+++|++|+||||.+.++.+ +.++.+....+...+.. . ..+ +...+ ..+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~--~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ 80 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRK--ILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSAL-ARYTN 80 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH--HHHGGGGTCCCEESSCCGGGEECSCTTSTHHHH-HHSCH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchh--cEEcCCCeEEccCCccCHHHhccCCHHHHHHHH-HhCCH
Confidence 5999999976 5999999999999999999998765321 00000000000000000 0 000 00000 00000
Q ss_pred Cc-cccc-C-Ccccccccccccee---CHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE----CCEEEEEEcCCcEEEcC
Q 008915 182 NR-CGFE-G-KGEIWVEDILNLGV---SPAKLIEIVKKRFISLGGVIFEGYSVSSICTY----ENAAVLLLAEGKILSSH 251 (549)
Q Consensus 182 ~~-i~f~-~-~~~l~~~~~l~~~V---~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~----~dgv~V~~~dG~~i~Ar 251 (549)
.. +.+. . +-++... ..+..+ ++..+.+.|.+.+++.|++++.+++|+++..+ ++++.|++++| +++|+
T Consensus 81 ~~~~~~~~~~Gi~~~~~-~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad 158 (401)
T 2gqf_A 81 WDFISLVAEQGITYHEK-ELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCK 158 (401)
T ss_dssp HHHHHHHHHTTCCEEEC-STTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEES
T ss_pred HHHHHHHHhCCCceEEC-cCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECC
Confidence 00 0000 0 0000000 001111 45678888999998899999999999999876 56788887666 79999
Q ss_pred EEEEccCCCh-----------HHHHHhcCC
Q 008915 252 LIIDAMGNFS-----------PVVKQIRSG 270 (549)
Q Consensus 252 lVI~ADG~~S-----------~vrrql~~~ 270 (549)
.||.|+|..| .++++++..
T Consensus 159 ~VVlAtG~~s~p~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 159 NLIVATGGLSMPGLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp EEEECCCCSSCGGGTCCSHHHHHHHHTTCC
T ss_pred EEEECCCCccCCCCCCChHHHHHHHHCCCC
Confidence 9999999999 677777654
No 52
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.04 E-value=7.6e-08 Score=91.69 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=32.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
++||+||||| +|+++|..|+++|++|+|+||.+.++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 5899999965 69999999999999999999988764
No 53
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.01 E-value=2.3e-09 Score=109.30 Aligned_cols=129 Identities=14% Similarity=0.178 Sum_probs=88.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
+|||+||||| +|+++|..|+++|++|+|||+.+.++. .|.- .++...+... ..+ ..+.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg--~~~~------------~~~~~~~~~~--~~~----~~~~~ 62 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGG--AWQH------------AWHSLHLFSP--AGW----SSIPG 62 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSG--GGGG------------SCTTCBCSSC--GGG----SCCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC--cccC------------CCCCcEecCc--hhh----hhCCC
Confidence 5899999976 599999999999999999999876541 2210 0110000000 000 00100
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEcCCcEEEcCEEEEccCCChH
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
...+.....-.++..+.+.|.+.+.+.|++++.+++|+++..+++.+. |++++| ++++|.||.|+|..|.
T Consensus 63 ---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 63 ---WPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp ---SCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred ---CCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 000000011234677888888888888999999999999999999988 888777 8999999999998773
No 54
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.01 E-value=1.9e-09 Score=118.85 Aligned_cols=155 Identities=14% Similarity=0.141 Sum_probs=91.1
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCc-----cccCCHHHHHHHHHcCCCCccc------------
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQ-----EWNISRKELLELVESGILVEDD------------ 170 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r-----~~~IS~~~l~~L~~lGl~~~~e------------ 170 (549)
.+||||||||| +|+++|+.|+++|++|+||||.+.++..- ..+.... .....+|+.+..+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGT--KQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCC--HHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 46999999976 59999999999999999999998765321 1111100 1122333321100
Q ss_pred ------chhhhh------hccCCCccccc-----CCcccccc-ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEE
Q 008915 171 ------IDEATA------TKFNPNRCGFE-----GKGEIWVE-DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSIC 232 (549)
Q Consensus 171 ------ie~~i~------~~~~~~~i~f~-----~~~~l~~~-~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~ 232 (549)
++.+.. ..+....+.|. ++...... ...+..+....+.+.|.+++.+.|++++.+++|+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~ 277 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLV 277 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEE
Confidence 000000 00000001110 00000000 0000113466788999999999999999999999998
Q ss_pred EEC-CEE---EEEEcCCc--EEEcCEEEEccCCChHHHH
Q 008915 233 TYE-NAA---VLLLAEGK--ILSSHLIIDAMGNFSPVVK 265 (549)
Q Consensus 233 ~~~-dgv---~V~~~dG~--~i~ArlVI~ADG~~S~vrr 265 (549)
.++ +.+ ++...+|+ +++||.||.|+|..|..++
T Consensus 278 ~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~ 316 (566)
T 1qo8_A 278 VNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKE 316 (566)
T ss_dssp ECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHH
T ss_pred ECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHH
Confidence 877 543 33333665 6999999999999997644
No 55
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.00 E-value=3.9e-09 Score=102.82 Aligned_cols=124 Identities=15% Similarity=0.049 Sum_probs=84.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC-CCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL-KGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~-~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
+|||+||||| +|+.+|..|+++|++|+|||+... .+ .+ ..+ .++-+.. .. +..++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G---~~-~~~-------~~~~~~~---~~-~~~~~~------- 60 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM---MP-FLP-------PKPPFPP---GS-LLERAY------- 60 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT---CC-SSC-------CCSCCCT---TC-HHHHHC-------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC---cc-cCc-------cccccch---hh-HHhhhc-------
Confidence 5999999976 599999999999999999999732 11 00 000 0000000 00 000110
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEECCEE-EEEEcCCcEEEcCEEEEccCCChHHHH
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPVVK 265 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv-~V~~~dG~~i~ArlVI~ADG~~S~vrr 265 (549)
. ..+ .++..+.+.|.+.+.+. |++++ +++|+++..+++.+ .|.+++|++++||.||.|+|.+|..+.
T Consensus 61 d--------~~g--~~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 61 D--------PKD--ERVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARL 129 (232)
T ss_dssp C--------TTC--CCHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEE
T ss_pred c--------CCC--CCHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhce
Confidence 0 001 16778889999999887 88888 57999999888875 477778888999999999999886554
Q ss_pred H
Q 008915 266 Q 266 (549)
Q Consensus 266 q 266 (549)
.
T Consensus 130 ~ 130 (232)
T 2cul_A 130 F 130 (232)
T ss_dssp E
T ss_pred e
Confidence 3
No 56
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.98 E-value=5.6e-09 Score=120.30 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=58.4
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE-EEEEcCCcEEEcCEEEEccCCChHH-HHHhcCC
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPV-VKQIRSG 270 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~dG~~i~ArlVI~ADG~~S~v-rrql~~~ 270 (549)
..+++..+.+.|.+.+++.|++++++++|+++..+++++ .|.+++| +++|+.||.|+|.+|.. .+.++..
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMA 217 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCC
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCC
Confidence 357899999999999999999999999999999888876 4666666 79999999999999963 4445443
No 57
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.97 E-value=5e-09 Score=105.46 Aligned_cols=113 Identities=19% Similarity=0.266 Sum_probs=83.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC-cEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGL-RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Gl-rVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.|||+||||| +|+++|..|+++|+ +|+|||+....+. |..+ . .+ ..+ .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~---~~~~----------~-----~~-----~~~-------~ 50 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQ---ITGS----------S-----EI-----ENY-------P 50 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCG---GGGC----------S-----CB-----CCS-------T
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcc---cccc----------c-----cc-----ccC-------C
Confidence 3899999975 58899999999999 9999999643221 1000 0 00 000 0
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
+ +...+++..+.+.+.+.+.+.|++++. ++++++..+++.+.|.+.+|++++++.||.|+|..+.
T Consensus 51 ~---------~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 51 G---------VKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp T---------CCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred C---------CcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC
Confidence 0 011356677888888888888999987 7999999888888888888889999999999997663
No 58
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.96 E-value=2.5e-07 Score=102.05 Aligned_cols=68 Identities=13% Similarity=0.096 Sum_probs=54.3
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEc---CCc--EEEcCEEEEccCCChH-HHHHhc
Q 008915 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGK--ILSSHLIIDAMGNFSP-VVKQIR 268 (549)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~---dG~--~i~ArlVI~ADG~~S~-vrrql~ 268 (549)
.+++..+...|.+.+.+.|++++.+++|+++..+++.+. |.+. +|+ +++||.||.|+|.+|. +.+..+
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g 258 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNF 258 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCC
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhc
Confidence 478888888899999999999999999999998877643 5542 343 7999999999999985 444333
No 59
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.96 E-value=2.8e-09 Score=109.33 Aligned_cols=132 Identities=22% Similarity=0.309 Sum_probs=85.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCcccc---------CCHHHHHHHHHcCCCCcccchhhhhh
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWN---------ISRKELLELVESGILVEDDIDEATAT 177 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~---------IS~~~l~~L~~lGl~~~~eie~~i~~ 177 (549)
+|||+||||| +|+++|..|+++ |++|+|+||...++.. .|. +.......|.++|+..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg-~~~~g~~~~~~~~~~~~~~~L~~~Gv~~---------- 133 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG-SWLGGQLFSAMVMRKPAHLFLQELEIPY---------- 133 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT-TTCCGGGCCCEEEETTTHHHHHHTTCCC----------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccc-ccccCcccchhhhhhHHHHHHHhhCccc----------
Confidence 6899999975 599999999998 9999999998876421 110 1111223333333321
Q ss_pred ccCCCcccccCCccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEEC--C-------EEEEEEc----
Q 008915 178 KFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYE--N-------AAVLLLA---- 243 (549)
Q Consensus 178 ~~~~~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~--d-------gv~V~~~---- 243 (549)
.....++ ...+...+.+.|.+++.+. |++++.+++|+++..++ + ++++...
T Consensus 134 ---------~~~g~~~------~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~ 198 (326)
T 2gjc_A 134 ---------EDEGDYV------VVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQ 198 (326)
T ss_dssp ---------EECSSEE------EESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHT
T ss_pred ---------ccCCCeE------EEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecc
Confidence 0000111 1124456788888888875 88999999999998764 2 2333211
Q ss_pred --------CCcEEEc---------------CEEEEccCCChHHHHHh
Q 008915 244 --------EGKILSS---------------HLIIDAMGNFSPVVKQI 267 (549)
Q Consensus 244 --------dG~~i~A---------------rlVI~ADG~~S~vrrql 267 (549)
++.++.| ++||+|+|+.|++.+.+
T Consensus 199 ~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 199 AHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp C---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred cccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 2357999 99999999999987654
No 60
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.95 E-value=3e-09 Score=118.12 Aligned_cols=145 Identities=16% Similarity=0.147 Sum_probs=90.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC-CCCCCcc-cc---CC-HHHHHHHHHcCCCCcccchhhhh-hccC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT-LKGREQE-WN---IS-RKELLELVESGILVEDDIDEATA-TKFN 180 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~-~~~~~r~-~~---IS-~~~l~~L~~lGl~~~~eie~~i~-~~~~ 180 (549)
.+||||||||| +|+++|+.||+.|.+|+|||+.. ..+...+ .+ +. ..-+..+..++-. ...... ....
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~----~~~~~d~~gi~ 95 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGE----MGKAIDATGIQ 95 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCS----HHHHHHHHEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccH----HHHHHHhcCCc
Confidence 36999999976 69999999999999999999984 1221111 11 11 1122233333211 000000 0000
Q ss_pred CCcccccCCcc-ccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEECCEEE-EEEcCCcEEEcCEEEEcc
Q 008915 181 PNRCGFEGKGE-IWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAM 257 (549)
Q Consensus 181 ~~~i~f~~~~~-l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~AD 257 (549)
...+. ....+ .+ .....+|+..+.+.|.+.+.+. |++++. ..|+++..+++.+. |.+.+|.+++|+.||.|+
T Consensus 96 f~~l~-~~kgpav~---~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLAT 170 (641)
T 3cp8_A 96 FRMLN-RSKGPAMH---SPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILAC 170 (641)
T ss_dssp EEEEC-SSSCTTTC---EEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECC
T ss_pred hhhcc-cccCcccc---chhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECc
Confidence 00000 00111 11 1124589989999999998874 888865 48999988888876 778788899999999999
Q ss_pred CCChH
Q 008915 258 GNFSP 262 (549)
Q Consensus 258 G~~S~ 262 (549)
|.+|.
T Consensus 171 G~~s~ 175 (641)
T 3cp8_A 171 GTFLN 175 (641)
T ss_dssp TTCBT
T ss_pred CCCCC
Confidence 98754
No 61
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.93 E-value=7.5e-09 Score=114.23 Aligned_cols=152 Identities=13% Similarity=0.137 Sum_probs=88.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCc-----cccCCHHHHHHHHHcCCCCccc-------------
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQ-----EWNISRKELLELVESGILVEDD------------- 170 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r-----~~~IS~~~l~~L~~lGl~~~~e------------- 170 (549)
++|||||||| +|+++|+.|+++|++|+||||.+..+..- ..+..... ...++|+.+..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~--~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTD--QQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCH--HHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCH--HHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 6999999975 69999999999999999999998764221 11111111 122333321100
Q ss_pred -----chhhhh-----hcc-CCCccccc-----CCcccccc-ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEE
Q 008915 171 -----IDEATA-----TKF-NPNRCGFE-----GKGEIWVE-DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT 233 (549)
Q Consensus 171 -----ie~~i~-----~~~-~~~~i~f~-----~~~~l~~~-~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~ 233 (549)
++.+.. .++ ....+.|. ++...... ...+-......+.+.|.+++.+.|++++.+++|+++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLK 283 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEE
Confidence 000000 000 00001110 00000000 00000133567889999999999999999999999988
Q ss_pred EC-CE---EEEEEcCCc--EEEcCEEEEccCCChHH
Q 008915 234 YE-NA---AVLLLAEGK--ILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 234 ~~-dg---v~V~~~dG~--~i~ArlVI~ADG~~S~v 263 (549)
++ +. +++...+|+ +++||.||.|+|..|..
T Consensus 284 ~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n 319 (571)
T 1y0p_A 284 DDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKN 319 (571)
T ss_dssp CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccC
Confidence 76 43 333333565 79999999999998863
No 62
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.92 E-value=6.3e-09 Score=115.62 Aligned_cols=144 Identities=17% Similarity=0.168 Sum_probs=90.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC-CCCCCcc----ccCCH-HHHHHHHHcCCCCcccchhhhh-hccCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT-LKGREQE----WNISR-KELLELVESGILVEDDIDEATA-TKFNP 181 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~-~~~~~r~----~~IS~-~~l~~L~~lGl~~~~eie~~i~-~~~~~ 181 (549)
+||||||||| +|+++|+.||+.|++|+|||+.. ..+...+ ..+.. .-+..+..+|-. +..... .....
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~----~~~~~d~~gi~f 103 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGL----MAKAIDQAGIQF 103 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCS----HHHHHHHHEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccH----HHHHhhhcccch
Confidence 6999999976 69999999999999999999974 2221111 01222 223344444421 111100 00000
Q ss_pred CcccccCCccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEE-EEEEcCCcEEEcCEEEEccCC
Q 008915 182 NRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGN 259 (549)
Q Consensus 182 ~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv-~V~~~dG~~i~ArlVI~ADG~ 259 (549)
..+....+...+ .+...+|+..+.+.|.+.+.+ .|++++ +++|+++..+++.+ .|.+.+|.+++|+.||.|+|.
T Consensus 104 ~~l~~~kgpav~---~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt 179 (651)
T 3ces_A 104 RILNASKGPAVR---ATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGT 179 (651)
T ss_dssp EEESTTSCGGGC---EEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCST
T ss_pred hhhhcccCcccc---cchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCC
Confidence 000000001111 112458888899999999987 588885 57999998877765 477778888999999999999
Q ss_pred Ch
Q 008915 260 FS 261 (549)
Q Consensus 260 ~S 261 (549)
+|
T Consensus 180 ~s 181 (651)
T 3ces_A 180 FL 181 (651)
T ss_dssp TT
T ss_pred Cc
Confidence 76
No 63
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.92 E-value=6.3e-09 Score=107.35 Aligned_cols=119 Identities=16% Similarity=0.161 Sum_probs=85.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
+|||+||||| +|+++|..|+++|++|+|||+.+..+. .| . .+ .+... .+. +
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg--~~-------~---~~--~~~~~-------~~~-----~-- 65 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGG--QL-------A---AL--YPEKH-------IYD-----V-- 65 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH--HH-------H---HT--CTTSE-------ECC-----S--
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC--cc-------c---cc--CCCcc-------ccc-----C--
Confidence 6999999975 588999999999999999999865431 01 0 00 00000 000 0
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC-EEEEEEcCCcEEEcCEEEEccCCChHHH
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFSPVV 264 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~dG~~i~ArlVI~ADG~~S~vr 264 (549)
. ..+ .+++..+.+.|.+.+.+.+++++.+++|+++..+++ .+.|.+.+|+++++|.||.|+|..|...
T Consensus 66 -~--~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~ 134 (360)
T 3ab1_A 66 -A--GFP-----EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEP 134 (360)
T ss_dssp -T--TCS-----SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCB
T ss_pred -C--CCC-----CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCC
Confidence 0 000 145667788888888888999999999999988765 6888888888999999999999987433
No 64
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.90 E-value=9e-09 Score=114.00 Aligned_cols=145 Identities=21% Similarity=0.147 Sum_probs=91.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC-CCCCCccc----cCCH-HHHHHHHHcCCCCcccchhhhh-hccCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT-LKGREQEW----NISR-KELLELVESGILVEDDIDEATA-TKFNP 181 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~-~~~~~r~~----~IS~-~~l~~L~~lGl~~~~eie~~i~-~~~~~ 181 (549)
+||||||||| +|+.+|+.||+.|++|+|||+.. ..+...+. .+.. .-...+..+|-. +..... .....
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~----~~~~~d~~gi~f 102 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGE----MGKAIDQTGIQF 102 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCS----HHHHHHHHEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhH----HHHHhhhcccce
Confidence 6999999976 69999999999999999999974 22211110 1222 223444455421 011110 00000
Q ss_pred CcccccCCccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEEE-EEEcCCcEEEcCEEEEccCC
Q 008915 182 NRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGN 259 (549)
Q Consensus 182 ~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~ADG~ 259 (549)
..+.-..+...+. +...+|+..+.+.|.+.+.+ .|++++ +++|+++..+++.+. |.+.+|.+++|+.||.|+|.
T Consensus 103 ~~l~~~kGpav~~---~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~ 178 (637)
T 2zxi_A 103 KMLNTRKGKAVQS---PRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGT 178 (637)
T ss_dssp EEESTTSCGGGCE---EEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTT
T ss_pred eecccccCccccc---hhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCC
Confidence 0000000011111 12457888899999999987 488885 579999988777654 77778889999999999998
Q ss_pred ChH
Q 008915 260 FSP 262 (549)
Q Consensus 260 ~S~ 262 (549)
.|.
T Consensus 179 ~s~ 181 (637)
T 2zxi_A 179 FLN 181 (637)
T ss_dssp CBT
T ss_pred Ccc
Confidence 753
No 65
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.90 E-value=1.1e-08 Score=104.22 Aligned_cols=118 Identities=15% Similarity=0.174 Sum_probs=85.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.|||+||||| +|+++|..|+++|++|+|||+.+..+. .| . . ..+. ..+ ..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg--~~-------~---~--~~~~-------------~~~--~~ 55 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGG--QL-------T---A--LYPE-------------KYI--YD 55 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCH--HH-------H---H--TCTT-------------SEE--CC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ee-------e---c--cCCC-------------cee--ec
Confidence 6999999975 588999999999999999999865431 01 0 0 0000 000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
... .+ .+++..+.+.|.+.+.+.+.+++.+++|++++.+++.+.|.+++|.++++|.||.|+|..|..
T Consensus 56 ~~~--~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 123 (335)
T 2zbw_A 56 VAG--FP-----KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFE 123 (335)
T ss_dssp STT--CS-----SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEE
T ss_pred cCC--CC-----CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCC
Confidence 000 00 134566777888888888999999999999998888888888788889999999999997643
No 66
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.89 E-value=5.4e-09 Score=111.28 Aligned_cols=70 Identities=17% Similarity=0.191 Sum_probs=58.0
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEE---------------ECCEE-EEEEcCCcEE--EcCEEEEccCCCh
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT---------------YENAA-VLLLAEGKIL--SSHLIIDAMGNFS 261 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~---------------~~dgv-~V~~~dG~~i--~ArlVI~ADG~~S 261 (549)
..+++..+.+.|.+++.+.|++++.+++|+++.. +++++ .|.+.+| ++ +|+.||.|+|.+|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 3478889999999999999999999999999987 45554 4677667 68 9999999999999
Q ss_pred H-HHHHhcCC
Q 008915 262 P-VVKQIRSG 270 (549)
Q Consensus 262 ~-vrrql~~~ 270 (549)
. +.+.++..
T Consensus 255 ~~l~~~~g~~ 264 (448)
T 3axb_A 255 NRLLNPLGID 264 (448)
T ss_dssp HHHHGGGTCC
T ss_pred HHHHHHcCCC
Confidence 7 77766543
No 67
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.85 E-value=1.6e-08 Score=107.96 Aligned_cols=145 Identities=14% Similarity=0.062 Sum_probs=87.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC--cEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCc------ccch------hh
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVE------DDID------EA 174 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Gl--rVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~------~eie------~~ 174 (549)
.+||+||||| +|+++|..|++.|+ +|+|+||...++. .|...... -..+++... ..+. ..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG--~~~~~~~~---~~~~~ip~~~~~~~~~~~~~g~~~~~~ 80 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGG--VWNYTSTL---SNKLPVPSTNPILTTEPIVGPAALPVY 80 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSST--TCSCCSCC---CSCCCSSBCCTTCCCCCBCCSSSCCBC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCC--eecCCCCC---CcccccccccccccccccccccccCCc
Confidence 5899999976 59999999999999 9999999865431 12211000 000000000 0000 00
Q ss_pred hhhccCCC-------cccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcC---
Q 008915 175 TATKFNPN-------RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE--- 244 (549)
Q Consensus 175 i~~~~~~~-------~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~d--- 244 (549)
....|..- ...|.+ +..+......+++..+.+.|.+.+.+.+..++.+++|+++...+++++|++.+
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~ 157 (447)
T 2gv8_A 81 PSPLYRDLQTNTPIELMGYCD---QSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKA 157 (447)
T ss_dssp CCCCCTTCBCSSCHHHHSCTT---CCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESST
T ss_pred cCchhhhhccCCCHHHhccCC---CCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCC
Confidence 00000000 001110 00011111224567788888888877777899999999999888888888865
Q ss_pred Cc---EEEcCEEEEccCCChH
Q 008915 245 GK---ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 245 G~---~i~ArlVI~ADG~~S~ 262 (549)
|+ ++++|.||.|+|++|.
T Consensus 158 G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 158 GSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp TCCEEEEEESEEEECCCSSSS
T ss_pred CCeeEEEEeCEEEECCCCCCC
Confidence 66 7999999999999763
No 68
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.83 E-value=3.1e-08 Score=110.04 Aligned_cols=63 Identities=14% Similarity=0.180 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHhcC-CEEEeCceEEEEEEECCEE---EEE-EcCCc--EEEcCEEEEccCCChHHHHH
Q 008915 204 PAKLIEIVKKRFISLG-GVIFEGYSVSSICTYENAA---VLL-LAEGK--ILSSHLIIDAMGNFSPVVKQ 266 (549)
Q Consensus 204 ~~~L~~~L~~~a~~~G-~~v~~~t~v~~i~~~~dgv---~V~-~~dG~--~i~ArlVI~ADG~~S~vrrq 266 (549)
...+.+.|.+++.+.| +++++++.|+++..+++.+ .+. +.+|+ +++|+.||.|+|..|.+...
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~ 202 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRY 202 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccC
Confidence 3568889999998888 8999999999999887743 332 24676 79999999999999987543
No 69
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.82 E-value=1.8e-08 Score=102.31 Aligned_cols=112 Identities=17% Similarity=0.218 Sum_probs=79.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.|||+||||| +|+++|..|+++|++|+|||+....+. |..+ + .+ ..+ .+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~----------~-----~~-----~~~-------~~ 57 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQ---IAWS----------E-----EV-----ENF-------PG 57 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGG---GGGC----------S-----CB-----CCS-------TT
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcc---cccc----------c-----cc-----ccC-------CC
Confidence 6999999975 588999999999999999999843221 1100 0 00 000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE--CCE-EEEEEcCCcEEEcCEEEEccCCCh
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY--ENA-AVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~--~dg-v~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
. ...+++..+.+.+.+.+.+.|++++. +++++++.+ ++. +.|.+.+|++++++.||.|+|..+
T Consensus 58 -----~----~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 58 -----F----PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp -----C----SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred -----C----CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 0 01245567788888888888999887 689998876 443 667777888999999999999865
No 70
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.81 E-value=7.9e-09 Score=112.47 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEEC-CEEE-EEEc-CCc--EEEcC-EEEEccCCCh
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAV-LLLA-EGK--ILSSH-LIIDAMGNFS 261 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dgv~-V~~~-dG~--~i~Ar-lVI~ADG~~S 261 (549)
.+.+.|.+++++.|++++++++|+++..++ +.++ |.+. +++ +++|+ .||.|+|..|
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 688899999999999999999999999874 4332 3332 343 69995 9999999988
No 71
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.80 E-value=2e-07 Score=99.05 Aligned_cols=42 Identities=17% Similarity=0.240 Sum_probs=38.1
Q ss_pred CEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 220 GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 220 ~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
++|+.+++|++|..+++++.|++++|++++||.||.|.....
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKA 289 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHH
Confidence 589999999999998889999998898899999999997654
No 72
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.79 E-value=3.5e-08 Score=99.85 Aligned_cols=110 Identities=16% Similarity=0.212 Sum_probs=79.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
+|||+||||| +|+++|..|+++|++|+||||....+. +..+ . .+ ..+ .+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~-------------~--~~-----~~~-------~~ 65 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGL---TAEA-------------P--LV-----ENY-------LG 65 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGG---GGGC-------------S--CB-----CCB-------TT
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc---cccc-------------c--hh-----hhc-------CC
Confidence 6999999975 599999999999999999999543221 1100 0 00 000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
+ ..+++..+.+.+.+.+.+.|++++. .++++++.+++.+.|.+ ++.+++++.||.|+|..+
T Consensus 66 ---~-------~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 66 ---F-------KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTH 126 (319)
T ss_dssp ---B-------SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEE
T ss_pred ---C-------cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCc
Confidence 0 1234556777788888888888887 78999998888888877 667899999999999765
No 73
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.78 E-value=5.8e-08 Score=96.49 Aligned_cols=109 Identities=22% Similarity=0.275 Sum_probs=79.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
+|||+||||| +|+++|..|+++|++|+|+|+....... .. . ...+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~------------------~~-----------~---~~~~~~ 49 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRF------------------AS-----------H---SHGFLG 49 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGG------------------CS-----------C---CCSSTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccccc------------------ch-----------h---hcCCcC
Confidence 4899999976 5999999999999999999987531100 00 0 000000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
. ..+++..+...+.+.+.+. +++++. ++|++++.+++++.|.+++|++++++.||.|+|..+
T Consensus 50 ~----------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 50 Q----------DGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp C----------TTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEE
T ss_pred C----------CCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCC
Confidence 0 0234567778888888776 456654 599999999889999998888999999999999865
No 74
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.78 E-value=4.5e-08 Score=107.37 Aligned_cols=133 Identities=17% Similarity=0.265 Sum_probs=87.5
Q ss_pred cccEEEEcch-HHHHHHHHHH-hCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALS-FKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA-r~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
++|||||||| +|+++|..|+ +.|++|+||||+...+. .|... .--|.. .++.. ..|.. .|.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GG--tw~~~-------~ypg~~--~d~~s---~~~~~---~~~ 70 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGG--TWYWN-------RYPGAL--SDTES---HLYRF---SFD 70 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCT--HHHHC-------CCTTCE--EEEEG---GGSSC---CSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCC--ccccc-------CCCCce--ecCCc---ceeee---ccc
Confidence 6999999976 5888999999 89999999999875441 12100 000110 00000 00100 010
Q ss_pred CCcccc-ccccccceeCHHHHHHHHHHHHHhcCC--EEEeCceEEEEEEECC--EEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 188 GKGEIW-VEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 188 ~~~~l~-~~~~l~~~V~~~~L~~~L~~~a~~~G~--~v~~~t~v~~i~~~~d--gv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
..+. .........+...+.+.|.+.+.+.|+ +++.+++|+++..+++ .++|++++|++++||.||.|+|..|
T Consensus 71 --~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 71 --RDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp --HHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred --cccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 0000 000001224567788888888888888 8999999999998876 7889998898999999999999876
No 75
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.77 E-value=5.7e-07 Score=94.73 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
.+-+.|.+.+.+.|++++.+++|+++..+++++ |. .+|++++||.||-|.|....
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~-~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKKV-YT-RDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-EE-TTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-EE-eCCcEEEeCEEEECCCHHHH
Confidence 466778888888899999999999999888888 64 57789999999999997654
No 76
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.77 E-value=3.8e-08 Score=98.88 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=80.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.+||+||||| +|+++|..|+++|++|+||||. ..+ .|.. .+ ..+ .+.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~gg---~~~~----------~~------------~~~-----~~~~ 63 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-PGG---QLTE----------AG------------IVD-----DYLG 63 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-TTG---GGGG----------CC------------EEC-----CSTT
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-CCC---eecc----------cc------------ccc-----ccCC
Confidence 6999999976 5999999999999999999997 222 1110 00 000 0000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
.+ .+++..+.+.+.+.+.+.|++++. ++|+++..+++.+.|.+.+|.+++++.||.|+|...
T Consensus 64 -----~~-----~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 64 -----LI-----EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp -----ST-----TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred -----CC-----CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCC
Confidence 00 134567778888888888999988 999999988888889988888999999999999873
No 77
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.76 E-value=1.5e-08 Score=102.89 Aligned_cols=117 Identities=17% Similarity=0.185 Sum_probs=80.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.+||+||||| +|+++|..|+++|++|+|||+...... .+. |.+.. .... ..+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~----~~g----------g~~~~-------~~~~----~~~-- 60 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDI----APG----------GQLTT-------TTDV----ENF-- 60 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB----CTT----------CGGGG-------CSEE----CCS--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCcccc----CCC----------ceeee-------cccc----ccC--
Confidence 5899999975 599999999999999999998211000 000 00000 0000 000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
+. +...+++..+.+.|.+.+.+.|++++.++ +++++.+++.++|++ +|.+++++.||.|+|..+.
T Consensus 61 ------~~-~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 61 ------PG-FPEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp ------TT-CTTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred ------CC-CccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 00 01124566788888888888899999887 889887777788887 7788999999999998764
No 78
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.75 E-value=8.8e-08 Score=104.97 Aligned_cols=134 Identities=19% Similarity=0.211 Sum_probs=83.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
++|||||||| .|+++|..|+++|++|+||||....+. .|... ..-|+.. +... ..|. ..|.
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG--~w~~~-------~~pg~~~--d~~~---~~~~---~~f~- 77 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG--VWYWN-------RYPGARC--DIES---IEYC---YSFS- 77 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-------CCTTCBC--SSCT---TTSS---CCSC-
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccc-------CCCceee--cccc---cccc---cccC-
Confidence 6999999976 588999999999999999999876541 12100 0001100 0000 0000 0010
Q ss_pred Cccccc-cccccceeCHHHHHHHHHHHHHhcC--CEEEeCceEEEEEEECC--EEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 189 KGEIWV-EDILNLGVSPAKLIEIVKKRFISLG--GVIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 189 ~~~l~~-~~~l~~~V~~~~L~~~L~~~a~~~G--~~v~~~t~v~~i~~~~d--gv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
..+.. ........++..+.+.|.+.+.+.+ .+++.+++|+++..+++ .+.|++++|++++||.||.|+|..|.
T Consensus 78 -~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 78 -EEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSV 155 (542)
T ss_dssp -HHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCC
T ss_pred -hhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCC
Confidence 00000 0000011345667777776666655 57999999999988764 68898888889999999999998763
No 79
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.75 E-value=2.6e-08 Score=100.88 Aligned_cols=118 Identities=18% Similarity=0.194 Sum_probs=82.8
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
..+||+||||| +|+++|..|+++|++|+||||.+..... +. |.+... ... ..+.
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~----~g----------g~~~~~-------~~~----~~~~ 75 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIA----AG----------GQLTTT-------TEI----ENFP 75 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBC----TT----------CGGGGS-------SEE----CCST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCC----cC----------cccccc-------hhh----cccC
Confidence 36999999976 5999999999999999999997621110 00 111000 000 0000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc---CCcEEEcCEEEEccCCCh
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---dG~~i~ArlVI~ADG~~S 261 (549)
. +...+++..+.+.+.+.+.+.|++++.++ |++++.+++.+.+.+. ++.+++++.||.|+|..+
T Consensus 76 --------~-~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 76 --------G-FPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp --------T-CTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred --------C-CcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 0 01124456788888888888899999998 9999888888888874 567899999999999854
No 80
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.74 E-value=8.4e-08 Score=105.43 Aligned_cols=134 Identities=18% Similarity=0.237 Sum_probs=87.0
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.++|||||||| +|+++|..|++.|++|+||||+...+. .|... ..-|... ++.. ..|. ..|.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG--tw~~~-------~ypg~~~--dv~s---~~y~---~~f~ 82 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG--VWYWN-------RYPGARC--DVES---IDYS---YSFS 82 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-------CCTTCBC--SSCT---TTSS---CCSC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccC-------CCCCcee--CCCc---hhcc---cccc
Confidence 36999999976 588899999999999999999875441 11100 0001100 0000 0010 0010
Q ss_pred CCcccc-ccccccceeCHHHHHHHHHHHHHhcCC--EEEeCceEEEEEEECC--EEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 188 GKGEIW-VEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 188 ~~~~l~-~~~~l~~~V~~~~L~~~L~~~a~~~G~--~v~~~t~v~~i~~~~d--gv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
..+. .........+...+.+.+.+.+.+.|. +++.+++|++++.+++ .++|++++|++++||.||.|+|..|
T Consensus 83 --~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 83 --PELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS 159 (549)
T ss_dssp --HHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE
T ss_pred --cccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 0000 000001123566778888888888887 8999999999998776 7889998898999999999999765
No 81
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.73 E-value=5.8e-08 Score=99.11 Aligned_cols=111 Identities=20% Similarity=0.270 Sum_probs=78.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.|||+||||| +|+++|..|+++|++|+|||+....+. |..+ . .+ ..+
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~-------------~--~~-----~~~--------- 61 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGA---LMTT-------------T--DV-----ENY--------- 61 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCG---GGSC-------------S--CB-----CCS---------
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCc---eecc-------------c--hh-----hhc---------
Confidence 6999999976 588899999999999999997633221 1000 0 00 000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEE-EEcCCcEEEcCEEEEccCCCh
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVL-LLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V-~~~dG~~i~ArlVI~ADG~~S 261 (549)
+ .+...+++..+.+.+.+.+.+.|++++.++ +++++. ++.+.| .+++|++++++.||.|+|..+
T Consensus 62 ------~-~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 62 ------P-GFRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAA 126 (335)
T ss_dssp ------T-TCTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEE
T ss_pred ------C-CCCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCc
Confidence 0 001124556777778888888899999887 888876 555667 777788999999999999865
No 82
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.73 E-value=1.3e-07 Score=104.37 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHhcCCEEEeCceEEEEEEEC-CE---EEEEEcCCc--EEEcCEEEEccCCChHH
Q 008915 204 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NA---AVLLLAEGK--ILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 204 ~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dg---v~V~~~dG~--~i~ArlVI~ADG~~S~v 263 (549)
...+.+.|.+++.+.|++++.+++|+++..++ +. +++...+|+ +++|+.||.|+|..|..
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 56788899999999999999999999998766 43 333333564 69999999999998864
No 83
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.71 E-value=6.8e-08 Score=98.96 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccC
Q 008915 207 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 258 (549)
Q Consensus 207 L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG 258 (549)
+.+.|.+++ |++++.+++|+++..++++++|++++|+++++|.||.|..
T Consensus 114 l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 114 IIKHYLKES---GAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMP 162 (342)
T ss_dssp HHHHHHHHH---TCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSC
T ss_pred HHHHHHHhc---CCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCC
Confidence 344444433 8899999999999999899999998888799999999986
No 84
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.71 E-value=8.9e-08 Score=96.71 Aligned_cols=115 Identities=20% Similarity=0.249 Sum_probs=83.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.+||+||||| +|+++|..|+++|++|+|||+.+..+. .| .. .+....+ ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG--~~-------~~------------------~~~~~~~--~~ 57 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG--QL-------SA------------------LYPEKYI--YD 57 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH--HH-------HH------------------HCTTSEE--CC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc--ee-------hh------------------cCCCceE--ec
Confidence 5899999976 588999999999999999999875431 11 00 0000000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC-EEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
.+.. ..+++..+...+.+.+.+.|++++.+++|++++.+++ .+.|.+++|+ ++++.||.|+|..|
T Consensus 58 -----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 58 -----VAGF--PKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGA 123 (332)
T ss_dssp -----STTC--SSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSC
T ss_pred -----cCCC--CCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCc
Confidence 0000 0134567888888888888999999999999988876 7888887775 99999999999954
No 85
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.71 E-value=3.2e-08 Score=108.55 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHh-cCCEEEeCceEEEEEE-ECC------EEE-EEEc---CCc--EEEcCEEEEccCCChHH
Q 008915 205 AKLIEIVKKRFIS-LGGVIFEGYSVSSICT-YEN------AAV-LLLA---EGK--ILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 205 ~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~-~~d------gv~-V~~~---dG~--~i~ArlVI~ADG~~S~v 263 (549)
..+.+.|.+++++ .|+++++++.|+++.. +++ .+. |.+. +|+ +++|+.||.|+|..|.+
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 3566778888887 6899999999999987 434 332 3332 565 79999999999999865
No 86
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.70 E-value=1.5e-07 Score=104.92 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE---EEEE-cCCc--EEEcCEEEEccCCChH
Q 008915 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLL-AEGK--ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv---~V~~-~dG~--~i~ArlVI~ADG~~S~ 262 (549)
..+.+.|.+++.+.|+++++++.|+++..+++.+ .+.. .+|+ +++|+.||.|+|..|.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 4688899999988899999999999998876643 2322 3565 7999999999999885
No 87
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.70 E-value=1.1e-07 Score=97.92 Aligned_cols=136 Identities=18% Similarity=0.161 Sum_probs=83.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC-cEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGL-RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Gl-rVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
+|||+||||| +|+++|..|++.|+ +|+|||+.. .+. .|.-.+.. .-+...... ...+.. ..+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg--~~~~~~~~------~~~~~~~~~----~~~~g~--~~~~ 68 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGH--SFKHWPKS------TRTITPSFT----SNGFGM--PDMN 68 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTH--HHHTSCTT------CBCSSCCCC----CGGGTC--CCTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCC--ccccCccc------ccccCcchh----cccCCc--hhhh
Confidence 5899999976 59999999999999 999999987 321 11100000 000000000 000000 0000
Q ss_pred CCccccccc--cccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 188 GKGEIWVED--ILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 188 ~~~~l~~~~--~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
.......+. .....+++..+.+.+.+.+.+.|++++.+++|+++..+++++.|.+.++ +++++.||.|+|..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 69 AISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp CSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred hccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 000000000 0011245566777888888888999999999999988877888888666 599999999999876
No 88
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.66 E-value=1.6e-07 Score=94.69 Aligned_cols=109 Identities=17% Similarity=0.205 Sum_probs=72.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
+|||+||||| +|+++|..|+|+|++|+|||+....+. + . ..+ ++ |..
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~-----~-------------~----------~~~-~~---~~~ 53 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNR-----V-------------T----------QNS-HG---FIT 53 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGG-----G-------------S----------SCB-CC---STT
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCe-----e-------------e----------eec-CC---ccC
Confidence 6999999965 688899999999999999998754220 0 0 001 00 100
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE-CCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
. -.+++..+.+...+.+.+.+...+...+++.+... ++.++|.+.+|+++++|-||-|+|..
T Consensus 54 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 54 R----------DGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp C----------TTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred C----------CCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 0 01344556666666666666654555555665544 44567888889999999999999974
No 89
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.65 E-value=8.3e-08 Score=96.75 Aligned_cols=111 Identities=11% Similarity=0.111 Sum_probs=78.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.+||+||||| +|+++|..|+++|++|+|+|+....+. |..+ . .+ ..+ .
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~-------------~--~~-----~~~-------~- 53 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQ---LTTT-------------T--EV-----ENW-------P- 53 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGG---GGGC-------------S--BC-----CCS-------T-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCce---Eecc-------------h--hh-----hhC-------C-
Confidence 5899999975 599999999999999999997533221 1000 0 00 000 0
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
. +...+.+..+.+.+.+.+.+.|++++.++ ++.++.+++.+.| +.++.+++++.||.|+|..+
T Consensus 54 --~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 54 --G------DPNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp --T------CCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEE
T ss_pred --C------CCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCc
Confidence 0 00123455677777778888899999886 8888877777777 66788899999999999865
No 90
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.64 E-value=2.5e-07 Score=99.74 Aligned_cols=60 Identities=17% Similarity=0.171 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEc-CCcEEEcCEEEEccCCChHHH
Q 008915 204 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA-EGKILSSHLIIDAMGNFSPVV 264 (549)
Q Consensus 204 ~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~-dG~~i~ArlVI~ADG~~S~vr 264 (549)
...+.+.|.+++++.|+++++++++ ++..+++.+. |.+. ++.+++|+.||.|+|..|.+.
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccC
Confidence 4567788888887789999999999 9988777552 3332 233588999999999999764
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.64 E-value=2.1e-07 Score=102.10 Aligned_cols=134 Identities=18% Similarity=0.199 Sum_probs=85.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhh-hccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATA-TKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~-~~~~~~~i~f~ 187 (549)
++|||||||| +|+++|..|++.|++|+||||+...+. .|... .--|+.. ++..... ..+.+...
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG--tw~~~-------~yPg~~~--d~~~~~y~~~f~~~~~--- 74 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG--TWYWN-------RYPGCRL--DTESYAYGYFALKGII--- 74 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-------CCTTCBC--SSCHHHHCHHHHTTSS---
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccC-------CCCceee--cCchhhcccccCcccc---
Confidence 6999999976 588899999999999999999875441 12100 0001100 0000000 00000000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCC--EEEeCceEEEEEEECC--EEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~--~v~~~t~v~~i~~~~d--gv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
...-+. ....+...+.+.+.+.+.+.|. .++.+++|++++.+++ .+.|++++|++++||.||.|+|..|.
T Consensus 75 -~~~~~~----~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 75 -PEWEWS----ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSA 148 (545)
T ss_dssp -TTCCCS----BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC
T ss_pred -cCCCcc----ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 000010 1123456677777777777777 7899999999987655 78899988989999999999997663
No 92
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.64 E-value=2.1e-08 Score=103.61 Aligned_cols=139 Identities=18% Similarity=0.140 Sum_probs=81.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-----C-----ccc-------------cCCHHHHHHHHHcCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-----E-----QEW-------------NISRKELLELVESGI 165 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-----~-----r~~-------------~IS~~~l~~L~~lGl 165 (549)
++|||||||| +|+++|+.|+++|++|+||||...... . ..+ .++..+++.+.++.-
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVELVP 85 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHHhCc
Confidence 6999999976 599999999999999999999865431 0 001 011223344444311
Q ss_pred CCcccchhh----h-------hhcc-CC--CcccccCCcccc-ccc---cccceeCHHHHHHHHHHHHHhcCCEEEeCce
Q 008915 166 LVEDDIDEA----T-------ATKF-NP--NRCGFEGKGEIW-VED---ILNLGVSPAKLIEIVKKRFISLGGVIFEGYS 227 (549)
Q Consensus 166 ~~~~eie~~----i-------~~~~-~~--~~i~f~~~~~l~-~~~---~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~ 227 (549)
.. ..++.. + ..++ .. ..+......++. ... .....+++..+.+.|.+++++.|++++. ++
T Consensus 86 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~p~~~~g~~~~~~~v~p~~~~~~l~~~~~~~G~~i~~-~~ 163 (363)
T 1c0p_A 86 TG-HAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFER-RT 163 (363)
T ss_dssp TT-SSEEEEEEEEEESSGGGGGGGTTTTTSTTCEECCGGGSSTTCEEEEEEEEECCHHHHHHHHHHHHHHTTCEEEE-CC
T ss_pred cc-CCeEEECCEEEEecCccchhHHHHHhCCCcEECCHHHCCCceEEEEEecceecHHHHHHHHHHHHHHCCCEEEE-EE
Confidence 10 001000 0 0000 00 000000001110 000 0124589999999999999999999998 88
Q ss_pred EEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 228 VSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 228 v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
|+++..+ .+ +|+.||.|+|.+|.
T Consensus 164 v~~l~~~-----------~~-~a~~VV~A~G~~s~ 186 (363)
T 1c0p_A 164 VTSLEQA-----------FD-GADLVVNATGLGAK 186 (363)
T ss_dssp CSBGGGT-----------CS-SCSEEEECCGGGGG
T ss_pred cccHhhc-----------Cc-CCCEEEECCCcchh
Confidence 8877432 12 89999999999984
No 93
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.63 E-value=3.1e-07 Score=103.01 Aligned_cols=58 Identities=16% Similarity=0.184 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE---EEEEE-cCCc--EEEcCEEEEccCCChH
Q 008915 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENA---AVLLL-AEGK--ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg---v~V~~-~dG~--~i~ArlVI~ADG~~S~ 262 (549)
..+.+.|.+++.+.|+++++++.|+++..+++. +.+.. .+|+ +++|+.||.|+|..+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 468888999998889999999999999887663 33322 4565 5999999999999884
No 94
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.63 E-value=1.2e-07 Score=95.35 Aligned_cols=111 Identities=21% Similarity=0.232 Sum_probs=78.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
+|||+||||| +|+++|..|+++|++|+|||+.. .+ .|.- ..+ +. .+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-gG---~~~~---------~~~------~~------------~~~~ 49 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-GG---QILD---------TVD------IE------------NYIS 49 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-TG---GGGG---------CCE------EC------------CBTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-Cc---eecc---------ccc------cc------------cccC
Confidence 4899999975 58899999999999999998631 11 1100 000 00 0000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEEC---CEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE---NAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~---dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
.+ ..++..+.+.+.+.+.+.|++++.+++|+.++.+. +.+.|.+++|++++++.||.|+|..+
T Consensus 50 -----~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 50 -----VP-----KTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp -----BS-----SEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred -----cC-----CCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 00 12345677778888888899999999999997653 26788888888899999999999865
No 95
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.62 E-value=1.6e-07 Score=96.45 Aligned_cols=51 Identities=16% Similarity=0.247 Sum_probs=42.3
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
..+++..+.+.|.+++++.|+++++ ++|+++...+ .++|+.||.|+|.+|.
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAG 187 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGG
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChH
Confidence 4689999999999999999999988 8887763221 2689999999999984
No 96
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.61 E-value=4.4e-07 Score=100.49 Aligned_cols=59 Identities=14% Similarity=0.212 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEE-CCEEE-EEE---cCCc--EEEcCEEEEccCCChHH
Q 008915 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAAV-LLL---AEGK--ILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-~dgv~-V~~---~dG~--~i~ArlVI~ADG~~S~v 263 (549)
..+.+.|.+++.+.|+++++++.|+++..+ ++.+. |.+ .+|+ +++|+.||.|+|..|.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 567788999998889999999999999886 44332 332 3565 69999999999998753
No 97
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.60 E-value=3.5e-07 Score=96.19 Aligned_cols=57 Identities=23% Similarity=0.405 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEcCCcEEEcCEEEEccCCChH
Q 008915 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
..+-+.|.+.+.+.|++|+.+++|++|..++++++ |++ +|++++||.||-|.|....
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 34667788888889999999999999999988876 666 5778999999999997654
No 98
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.57 E-value=2.3e-07 Score=99.74 Aligned_cols=145 Identities=17% Similarity=0.164 Sum_probs=85.3
Q ss_pred ccEEEEcch-HHHHHHHHHHh---CCCc---EEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCc
Q 008915 111 FDVIVCGGT-LGIFIATALSF---KGLR---VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNR 183 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr---~Glr---VlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~ 183 (549)
+||+||||| +|+++|..|++ .|++ |+||||....+ ..|...... .+...|+.....+-...........
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G--G~w~~~~~~--g~~~~g~~~~~~~y~~l~~~~~~~~ 78 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG--GQWNYTWRT--GLDENGEPVHSSMYRYLWSNGPKEC 78 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC--GGGSCCSCC--SBCTTSSBCCCCCCTTCBCSSCGGG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC--CEeecCCCC--CccccCCCCcCccccchhhcCChhh
Confidence 799999976 58889999999 9999 99999986544 122211000 0000111000000000000000000
Q ss_pred ccccCCcccccccc----ccceeCHHHHHHHHHHHHHhcCCE--EEeCceEEEEEEECC--EEEEEEcC---C--cEEEc
Q 008915 184 CGFEGKGEIWVEDI----LNLGVSPAKLIEIVKKRFISLGGV--IFEGYSVSSICTYEN--AAVLLLAE---G--KILSS 250 (549)
Q Consensus 184 i~f~~~~~l~~~~~----l~~~V~~~~L~~~L~~~a~~~G~~--v~~~t~v~~i~~~~d--gv~V~~~d---G--~~i~A 250 (549)
+.|.+ +..+.. ....+++..+.+.|.+.+.+.|++ ++.+++|+++...++ .+.|++.+ | .++++
T Consensus 79 ~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~ 155 (464)
T 2xve_A 79 LEFAD---YTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEF 155 (464)
T ss_dssp TCBTT---BCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred cccCC---CCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEc
Confidence 11110 000000 012246677888888888888887 999999999998876 67777754 4 47999
Q ss_pred CEEEEccCCChH
Q 008915 251 HLIIDAMGNFSP 262 (549)
Q Consensus 251 rlVI~ADG~~S~ 262 (549)
|.||.|+|..|.
T Consensus 156 d~VVvAtG~~s~ 167 (464)
T 2xve_A 156 DYVVCCTGHFST 167 (464)
T ss_dssp SEEEECCCSSSS
T ss_pred CEEEECCCCCCC
Confidence 999999997653
No 99
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.51 E-value=5.5e-07 Score=90.44 Aligned_cols=115 Identities=21% Similarity=0.250 Sum_probs=76.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCC-cccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILV-EDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~-~~eie~~i~~~~~~~~i~f~ 187 (549)
.||||||||| +|+++|..|+++|++|+|+|+....+.... |-+. ...++ .+ .
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~--------------G~~~~~~~i~-----~~-------~ 57 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG--------------GQLTTTTIIE-----NF-------P 57 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT--------------CGGGGSSEEC-----CS-------T
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC--------------CCcCChHHhh-----hc-------c
Confidence 6999999965 688999999999999999999765332100 1000 00000 00 0
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
+ .+ ..++...+...+.+.+...+.++... .+.......+...+.+.++.+++++-||-|+|..
T Consensus 58 g-----~~----~~i~~~~l~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 58 G-----FP----NGIDGNELMMNMRTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp T-----CT----TCEEHHHHHHHHHHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred C-----Cc----ccCCHHHHHHHHHHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEccccc
Confidence 0 01 12445667777777787788877654 4666666666677777788899999999999964
No 100
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.51 E-value=1.2e-07 Score=101.40 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=82.6
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCC-----CcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKG-----LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPN 182 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~G-----lrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~ 182 (549)
..||||||||| +|+++|..|+++| ++|+||||.+..+.....-+. ...+ +...++.... ..++.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~--------~~~~-~~~~~~~l~~-~~~p~ 98 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVS--------QSEL-QISFLKDLVS-LRNPT 98 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCS--------SCBC-SSCTTSSSST-TTCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCC--------CCcC-Ccchhhcccc-ccCCC
Confidence 36999999976 5999999999999 999999999865421100000 0000 0000000000 00000
Q ss_pred -ccccc----CCcccc-ccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE---CCE--EEEEEcCCc----E
Q 008915 183 -RCGFE----GKGEIW-VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY---ENA--AVLLLAEGK----I 247 (549)
Q Consensus 183 -~i~f~----~~~~l~-~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~---~dg--v~V~~~dG~----~ 247 (549)
...|. ....+. ....-.....+..+.+.|...+.+.+++++.+++|++++.+ ++. ++|++.+|. +
T Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~ 178 (463)
T 3s5w_A 99 SPYSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELV 178 (463)
T ss_dssp CTTSHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEE
T ss_pred CCCChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEE
Confidence 00000 000000 00000112345677788877777778899999999999876 332 467766665 8
Q ss_pred EEcCEEEEccCCCh
Q 008915 248 LSSHLIIDAMGNFS 261 (549)
Q Consensus 248 i~ArlVI~ADG~~S 261 (549)
+++|.||.|+|...
T Consensus 179 ~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 179 RTTRALVVSPGGTP 192 (463)
T ss_dssp EEESEEEECCCCEE
T ss_pred EEeCEEEECCCCCC
Confidence 99999999999743
No 101
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.51 E-value=7.4e-07 Score=95.93 Aligned_cols=60 Identities=20% Similarity=0.230 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEcCCcEEEcCEEEEccCCChHHHH
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSPVVK 265 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~ADG~~S~vrr 265 (549)
.|-+.|.+.+++.|++|+.+++|++|..++++++ |+++||++++||.||.+.+.....++
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~ 282 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRD 282 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC-------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHH
Confidence 4567788888889999999999999999999877 88889999999999987776554443
No 102
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.50 E-value=7.8e-07 Score=99.56 Aligned_cols=153 Identities=18% Similarity=0.195 Sum_probs=84.8
Q ss_pred cccEEEEcch-HHHHHHHHHH---h-CCCcEEEEccCCCCCCC----cccc----C----------CHHHH-HHHHH--c
Q 008915 110 TFDVIVCGGT-LGIFIATALS---F-KGLRVAIVERNTLKGRE----QEWN----I----------SRKEL-LELVE--S 163 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA---r-~GlrVlLIEr~~~~~~~----r~~~----I----------S~~~l-~~L~~--l 163 (549)
+||||||||| +|+++|+.|+ + +|.+|+||||....+.. ..+. + +.... ..... .
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 101 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMM 101 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHhc
Confidence 6999999965 6999999999 6 89999999998764321 1111 2 11111 11111 1
Q ss_pred CCCCcccchhhhh------hccCCCcccccC--CccccccccccceeCHHHHHHHHHHHHHhc-CC-EEEeCceEEEEEE
Q 008915 164 GILVEDDIDEATA------TKFNPNRCGFEG--KGEIWVEDILNLGVSPAKLIEIVKKRFISL-GG-VIFEGYSVSSICT 233 (549)
Q Consensus 164 Gl~~~~eie~~i~------~~~~~~~i~f~~--~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~-~v~~~t~v~~i~~ 233 (549)
++.++.-++.+.. .......+.|.. ...+.........++...+.+.|.+++++. |+ ++++++.|+++..
T Consensus 102 ~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~ 181 (643)
T 1jnr_A 102 GLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLK 181 (643)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEE
Confidence 2222111110000 000000111210 001110000001122334667788888777 99 9999999999988
Q ss_pred ECC---EEE-EE---EcCCc--EEEcCEEEEccCCChH
Q 008915 234 YEN---AAV-LL---LAEGK--ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 234 ~~d---gv~-V~---~~dG~--~i~ArlVI~ADG~~S~ 262 (549)
+++ .+. |. +.+|+ +++|+.||.|+|..|.
T Consensus 182 ~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 182 DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 766 442 22 24565 6999999999999885
No 103
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.49 E-value=5.5e-07 Score=98.21 Aligned_cols=113 Identities=20% Similarity=0.222 Sum_probs=80.8
Q ss_pred CCcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 108 VGTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 108 ~~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
...|||+||||| +|+++|..|+++|++|+|||+.. .+ .|.- ..+ ++ .+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-GG---~~~~---------~~~------~~------------~~ 258 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-GG---QVLD---------TVD------IE------------NY 258 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-TG---GGTT---------CSC------BC------------CB
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-CC---cccc---------ccc------cc------------cc
Confidence 347999999965 58899999999999999999632 11 1100 000 00 00
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEEC---CEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE---NAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~---dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
. ..+ ..+...+.+.+.+.+.+.|++++.+++|+++..+. +.+.|++++|.+++++.||.|+|..+
T Consensus 259 ~-----~~~-----~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 259 I-----SVP-----KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp T-----TBS-----SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred C-----CCC-----CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 0 000 13456677888888888899999999999997542 36788888888999999999999865
No 104
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.46 E-value=1e-06 Score=92.82 Aligned_cols=48 Identities=15% Similarity=0.123 Sum_probs=40.0
Q ss_pred HHHHHH-hcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCC
Q 008915 211 VKKRFI-SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (549)
Q Consensus 211 L~~~a~-~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~ 259 (549)
+.+++. +.| +|+.+++|++|..++++++|++.+|++++||.||.|.|.
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPM 257 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCG
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCc
Confidence 334443 346 999999999999888899999988888999999999993
No 105
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.40 E-value=9.3e-07 Score=99.11 Aligned_cols=58 Identities=17% Similarity=0.136 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhc--CCEEEeCceEEEEEEECC---EE---EEE-EcCCc--EEEcCEEEEccCCChH
Q 008915 205 AKLIEIVKKRFISL--GGVIFEGYSVSSICTYEN---AA---VLL-LAEGK--ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 205 ~~L~~~L~~~a~~~--G~~v~~~t~v~~i~~~~d---gv---~V~-~~dG~--~i~ArlVI~ADG~~S~ 262 (549)
..+.+.|.+++++. |+++++++.++++..+++ .+ .+. ..+|+ +++|+.||.|+|..+.
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 45677888888887 999999999999988766 33 222 13454 6999999999998774
No 106
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.38 E-value=2.2e-06 Score=85.64 Aligned_cols=109 Identities=16% Similarity=0.182 Sum_probs=75.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEE-EccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAI-VERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlL-IEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.+||+||||| +|+++|..|+++|++|+| +||....+. |..+ . .. ..+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~---~~~~----------~-------------~~----~~~~ 53 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQ---ITSS----------S-------------EI----ENYP 53 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGG---GGGC----------S-------------CB----CCST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCce---eeee----------c-------------ee----ccCC
Confidence 6999999975 589999999999999999 999443221 1000 0 00 0000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEEC--CEEEEEEc-CCcEEEcCEEEEccCCC
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE--NAAVLLLA-EGKILSSHLIIDAMGNF 260 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~--dgv~V~~~-dG~~i~ArlVI~ADG~~ 260 (549)
+ ....+++..+...+.+.+.+.|++++.+ +++++ .++ +.+.+.+. ++ +++++.||.|+|..
T Consensus 54 ~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 54 G---------VAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSA 117 (315)
T ss_dssp T---------CCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEE
T ss_pred C---------CCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCC
Confidence 0 0112455677788888888889999888 89998 776 67775343 34 89999999999973
No 107
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.38 E-value=2.5e-06 Score=85.89 Aligned_cols=111 Identities=21% Similarity=0.211 Sum_probs=68.2
Q ss_pred CCcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 108 VGTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 108 ~~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
+.+||||||||| +|+++|..|+++|++|+||||..+.+... + .+ .+. . +
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~--~-----------~~-----~i~-----~-------~ 53 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMA--N-----------TE-----EVE-----N-------F 53 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGG--G-----------CS-----CBC-----C-------S
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeee--c-----------cc-----ccC-----C-------c
Confidence 347999999965 68889999999999999999875433110 0 00 000 0 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
.+.. .+....+.........+.+..+.....+...... ... +...+++++++|.||-|+|..
T Consensus 54 p~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 54 PGFE----------MITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKG-EYK-VINFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp TTCS----------SBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECS-SCE-EEECSSCEEEEEEEEECCCEE
T ss_pred CCcc----------ccchHHHHHHHHHHHhhccccccceeeeeeeeee-cce-eeccCCeEEEeceeEEcccCc
Confidence 0000 1223344445555555666777666655544332 233 333467899999999999964
No 108
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.37 E-value=2.4e-07 Score=99.33 Aligned_cols=139 Identities=17% Similarity=0.068 Sum_probs=77.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
+|||+||||| +|+++|..|+++|++|+||||....+....+.. ..+...+...++++ .+ ...+....+. +
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~gG~~~~~g~-~psk~ll~~~~~~~-----~~-~~~~~~~g~~--~ 73 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGC-IPSKALLRNAELVH-----IF-TKDAKAFGIS--G 73 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCTTHHHHHHSH-HHHHHHHHHHHHHH-----HH-HHHTTTTTEE--E
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCcccccCc-hhhHHHHHHHHHHH-----HH-HHHHHhcCCC--C
Confidence 5899999976 588899999999999999999843321100000 00111222111111 01 0011100010 0
Q ss_pred Cccccccccc---cceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC--cEEEcCEEEEccCCChH
Q 008915 189 KGEIWVEDIL---NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 189 ~~~l~~~~~l---~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG--~~i~ArlVI~ADG~~S~ 262 (549)
...+..+... ...+ ..+.+.+.+.+.+.|++++.++.+. .+++.+.|.+.+| ++++++.||.|+|..+.
T Consensus 74 ~~~~~~~~~~~~~~~~~--~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 74 EVTFDYGIAYDRSRKVA--EGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTR 147 (464)
T ss_dssp CCEECHHHHHHHHHHHH--HHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEEC
T ss_pred CCccCHHHHHHHHHHHH--HHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 0000000000 0000 2345556677777899999887643 4566788888777 68999999999998764
No 109
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.32 E-value=5.2e-07 Score=96.72 Aligned_cols=141 Identities=20% Similarity=0.202 Sum_probs=75.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC-CCcccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG-REQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~-~~r~~~-IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
+|||+||||| +|+++|..|++.|++|+||||.+..+ ....+. +.... .+....++ +.+. ..+....+.+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~--l~~~~~~~-----~~~~-~~~~~~g~~~ 77 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKA--LLHSSHMY-----HEAK-HSFANHGVKV 77 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHH--HHHHHHHH-----HHHH-HTHHHHTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHH--HHHHHHHH-----HHHH-HHHHhcCccc
Confidence 6999999976 58889999999999999999985433 211110 11111 01000000 0000 0000000000
Q ss_pred cCCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC--cEEEcCEEEEccCCChH
Q 008915 187 EGKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG--~~i~ArlVI~ADG~~S~ 262 (549)
. ...+..+...... --...+.+.+.+.+.+.|++++.++.+. .+++.+.|.+++| .+++++.||.|+|..+.
T Consensus 78 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~ 152 (470)
T 1dxl_A 78 S-NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---VSPSEISVDTIEGENTVVKGKHIIIATGSDVK 152 (470)
T ss_dssp S-CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---EETTEEEECCSSSCCEEEECSEEEECCCEEEC
T ss_pred C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 0 0000000000000 0012244445566666799999998654 4667788877677 68999999999998764
No 110
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.31 E-value=2.4e-06 Score=91.31 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=35.9
Q ss_pred CCEEEeCceEEEEEEECCEEEEEE---cCCcEEEcCEEEEccCCCh
Q 008915 219 GGVIFEGYSVSSICTYENAAVLLL---AEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 219 G~~v~~~t~v~~i~~~~dgv~V~~---~dG~~i~ArlVI~ADG~~S 261 (549)
|++|+.+++|++|..+++++.|++ .+|++++||.||-|.+...
T Consensus 249 g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 249 GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHH
T ss_pred hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHH
Confidence 679999999999998888888887 6777899999999998664
No 111
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.29 E-value=5.5e-06 Score=89.05 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcC-CEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 206 KLIEIVKKRFISLG-GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 206 ~L~~~L~~~a~~~G-~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
.+.+.|.+.+.+.| ++++.+++|++|..+++++.|++.+|++++||.||.|.|...
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 45566777777777 899999999999988888999988888899999999999643
No 112
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.29 E-value=4.2e-07 Score=97.99 Aligned_cols=141 Identities=23% Similarity=0.201 Sum_probs=74.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCC-HHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNIS-RKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS-~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
+||||||||| +|+++|..|++.|++|+||||.+..+.. +.+.. ..+...+....++ +.+ ..+....+.+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~-~~~~g~~psk~ll~~~~~~-----~~~--~~~~~~gi~~~ 77 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGV-CLNVGCIPSKALLHNAAVI-----DEV--RHLAANGIKYP 77 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHH-HHHHSHHHHHHHHHHHHHH-----HHH--HHGGGGTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCc-eeeecccchHHHHHHHHHH-----HHH--HHHHhCCcccC
Confidence 6999999975 5888999999999999999996543311 11100 0011111111110 000 00000001110
Q ss_pred CCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC------------cEEEcCEEE
Q 008915 188 GKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG------------KILSSHLII 254 (549)
Q Consensus 188 ~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG------------~~i~ArlVI 254 (549)
. ..+..+...... --...+.+.+.+.+.+.|++++.++.+. .+++.+.|.+.+| .+++++.||
T Consensus 78 ~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lV 153 (482)
T 1ojt_A 78 E-PELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCI 153 (482)
T ss_dssp C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred C-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEE
Confidence 0 000000000000 0001233445556667799999887654 4567777766555 579999999
Q ss_pred EccCCChH
Q 008915 255 DAMGNFSP 262 (549)
Q Consensus 255 ~ADG~~S~ 262 (549)
.|+|..+.
T Consensus 154 iAtGs~p~ 161 (482)
T 1ojt_A 154 IAAGSRVT 161 (482)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCCC
Confidence 99998753
No 113
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.28 E-value=4.9e-07 Score=97.18 Aligned_cols=140 Identities=20% Similarity=0.187 Sum_probs=75.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCC-HHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNIS-RKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS-~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
+|||+||||| +|+++|..|+++|++|+||||....+.. +.+.. ..+...+...+++ +.+. ..+....+.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~-~~~~g~~psk~l~~~~~~~-----~~~~-~~~~~~gi~~~ 77 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGT-CLNVGCIPSKALLNNSHLF-----HQMH-TEAQKRGIDVN 77 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH-HHHHSHHHHHHHHHHHHHH-----HHHH-HTSGGGTEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCc-cceeccHHHHHHHHHHHHH-----HHHH-HHHHhcCcccC
Confidence 6999999975 5889999999999999999996543311 00000 0011111111111 0000 00100001000
Q ss_pred CCccccccccc---cceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC--cE------EEcCEEEEc
Q 008915 188 GKGEIWVEDIL---NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KI------LSSHLIIDA 256 (549)
Q Consensus 188 ~~~~l~~~~~l---~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG--~~------i~ArlVI~A 256 (549)
....+..+... ... ...+...+.+.+.+.|++++.++.+.. +++.+.|.+.+| ++ +++|.||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~~d~lViA 152 (478)
T 1v59_A 78 GDIKINVANFQKAKDDA--VKQLTGGIELLFKKNKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILDVKNIIVA 152 (478)
T ss_dssp SCEEECHHHHHHHHHHH--HHHHHHHHHHHHHHTTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEEEEEEEEC
T ss_pred CCCccCHHHHHHHHHHH--HHHHHHHHHHHHHhCCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEEeCEEEEC
Confidence 00000000000 000 012334455666678999999987652 556777877666 56 999999999
Q ss_pred cCCCh
Q 008915 257 MGNFS 261 (549)
Q Consensus 257 DG~~S 261 (549)
+|..+
T Consensus 153 tGs~p 157 (478)
T 1v59_A 153 TGSEV 157 (478)
T ss_dssp CCEEE
T ss_pred cCCCC
Confidence 99876
No 114
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=1.5e-06 Score=92.85 Aligned_cols=135 Identities=19% Similarity=0.092 Sum_probs=75.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCcccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~-IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
+||||||||| +|+++|..|++.|++|+||||....+....+. +.... .+....+ .+.+ ..+....+.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~gG~~~~~g~~p~k~--l~~~~~~-----~~~~--~~~~~~g~~~~ 73 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKA--LISASHR-----YEQA--KHSEEMGIKAE 73 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHTSHHHHHH--HHHHHHH-----HHHH--HTCGGGTEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCcCcCcCchhhHH--HHHHHHH-----HHHH--HHHHhcCcccC
Confidence 6999999976 58889999999999999999984432111000 11110 0100000 0000 00000001110
Q ss_pred CCccccccccccceeCH-----HHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC-cEEEcCEEEEccCCCh
Q 008915 188 GKGEIWVEDILNLGVSP-----AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG-KILSSHLIIDAMGNFS 261 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~-----~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG-~~i~ArlVI~ADG~~S 261 (549)
. ..+..+. .+.+ ..+.+.+.+.+.+.|++++.++.+. .+++.+.|++.+| ++++++.||.|+|..+
T Consensus 74 ~-~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 74 N-VTIDFAK----VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF---VDANTVRVVNGDSAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp S-CEECHHH----HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE---EETTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred C-CccCHHH----HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEeCCCcEEEEeCEEEEecCCCC
Confidence 0 0000000 0111 1244455666777899999988653 4677888888777 6899999999999754
No 115
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.18 E-value=3.5e-06 Score=89.93 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EEEEEcCCcEEEcCEEEEccCCC
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
.|-+.|.+.+.+.|++|+.+++|++|..++++ +.|++ ++.+++||.||-|.+..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHH
Confidence 35667777787889999999999999987777 77776 55589999999998754
No 116
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.15 E-value=1.1e-05 Score=83.94 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=81.5
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-+|+|+||| .|+-+|..|++.|.+|.++|+.+.+.. . +
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------------~-------~--- 184 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-------------------------------G-------L--- 184 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-------T---
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-------------------------------c-------c---
Confidence 369999976 599999999999999999998652110 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH--HHHHh
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQI 267 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~--vrrql 267 (549)
. +..+.+.+.+.+++.|++++.+++++++..+++++.|.+++|+++.|+.||.|.|..+. +.+.+
T Consensus 185 ------------~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~ 251 (384)
T 2v3a_A 185 ------------L-HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAA 251 (384)
T ss_dssp ------------S-CHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHT
T ss_pred ------------c-CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHC
Confidence 0 01234556677778899999999999999888888888888989999999999998764 45555
Q ss_pred cC
Q 008915 268 RS 269 (549)
Q Consensus 268 ~~ 269 (549)
+.
T Consensus 252 g~ 253 (384)
T 2v3a_A 252 GL 253 (384)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 117
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.14 E-value=1.2e-05 Score=85.73 Aligned_cols=41 Identities=10% Similarity=-0.022 Sum_probs=36.8
Q ss_pred CEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 220 GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 220 ~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
++|+.+++|++|..++++++|++.+| +++||.||.|.+...
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQ 289 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHH
Confidence 69999999999999999999998888 799999999987553
No 118
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.13 E-value=1.8e-05 Score=85.85 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=39.1
Q ss_pred CCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 219 GGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 219 G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
|++|+.+++|++|..++++++|.+.+|++++||.||.|.+...
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 7799999999999988888999988898999999999999765
No 119
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.10 E-value=3.1e-06 Score=89.92 Aligned_cols=108 Identities=16% Similarity=0.286 Sum_probs=69.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC--cEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Gl--rVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.+|||||||| +|+++|..|+++|+ +|+|||+.+.....+. .++ ..+-.+...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~l~-----------------------~~~~~~~~~- 58 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLP-PLS-----------------------KAYLAGKAT- 58 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSG-GGG-----------------------TTTTTTCSC-
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCC-CCc-----------------------HHHhCCCCC-
Confidence 5899999976 58889999999998 7999998764321110 000 000000000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
...+. .. +.+.+.+.|++++.+++|+.++.++. .|++++|+++++|.||.|+|..+
T Consensus 59 --~~~~~--------~~-------~~~~~~~~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 59 --AESLY--------LR-------TPDAYAAQNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp --SGGGB--------SS-------CHHHHHHTTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred --hHHhc--------cc-------CHHHHHhCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCc
Confidence 00010 00 01223456889999999999876544 56677888999999999999865
No 120
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.06 E-value=2.9e-06 Score=91.06 Aligned_cols=141 Identities=21% Similarity=0.212 Sum_probs=72.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC-CCcccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG-REQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~-~~r~~~-IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
+||||||||| +|+++|..|+++|++|+||||.+..+ ....+. +.... .+....++ +......+....+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~--l~~~~~~~-----~~~~~~~~~~~g~~~ 78 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKA--LLNNSHYY-----HMAHGTDFASRGIEM 78 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHH--HHHHHHHH-----HHHHSSHHHHTTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHH--HHHHHHHH-----HHhhhhhHhhCcccc
Confidence 6999999976 58889999999999999999986433 111000 10000 11000000 000000000000000
Q ss_pred cCCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcC-C-cEEEcCEEEEccCCCh
Q 008915 187 EGKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-G-KILSSHLIIDAMGNFS 261 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~d-G-~~i~ArlVI~ADG~~S 261 (549)
. ...+..+...... --...+...+.+.+.+.|++++.++.+ . .+++.+.|.+.+ + +++++|.||.|+|..+
T Consensus 79 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~--~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 79 S-EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-I--TGKNQVTATKADGGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp S-CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-E--EETTEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-E--ecCCEEEEEecCCCcEEEEeCEEEECCCCCC
Confidence 0 0000000000000 000123334456666779999988653 2 356778888766 4 5799999999999764
No 121
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.03 E-value=3.6e-06 Score=90.36 Aligned_cols=34 Identities=35% Similarity=0.454 Sum_probs=30.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
+|||+||||| .|+++|..|+++|++|+||||.+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 6999999976 588899999999999999999873
No 122
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.03 E-value=1.3e-05 Score=91.31 Aligned_cols=41 Identities=15% Similarity=0.034 Sum_probs=37.6
Q ss_pred cCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccC
Q 008915 218 LGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 258 (549)
Q Consensus 218 ~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG 258 (549)
.|++|+.+++|++|..++++++|++.+|++++||.||.|..
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCC
Confidence 47899999999999998889999998898999999999995
No 123
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.99 E-value=4.3e-05 Score=83.11 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=30.0
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.+|||+||||| +|+++|..|++.|++|+||||.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 36999999975 58888999999999999999965
No 124
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.99 E-value=5e-05 Score=80.39 Aligned_cols=42 Identities=21% Similarity=0.150 Sum_probs=36.9
Q ss_pred cCCEEEeCceEEEEEEECCE-EEEEEcCCcEEEcCEEEEccCCC
Q 008915 218 LGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 218 ~G~~v~~~t~v~~i~~~~dg-v~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
.|++|+.+++|++|..++++ +.|++ +|++++||.||.|.+..
T Consensus 225 lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 225 LGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred cCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 37899999999999999888 88876 67789999999999865
No 125
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.99 E-value=1.8e-05 Score=84.83 Aligned_cols=132 Identities=16% Similarity=0.060 Sum_probs=70.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCC-Ccccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~-~r~~~-IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
+|||+||||| +|+++|..|+++|++|+||||....+. ...+. +....+ +..... .+.. ..+...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l--~~~a~~-----~~~~--~~~~~~---- 70 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTV--REVIQT-----AWRL--TNIANV---- 70 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHH--HHHHHH-----HHHH--HHHHCS----
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHH--HHHHHH-----HHHH--HhcccC----
Confidence 5999999976 588899999999999999997664431 10000 000000 000000 0000 000000
Q ss_pred cCCccccccccccceeCHHHHH--HHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcE--EEcCEEEEccCC
Q 008915 187 EGKGEIWVEDILNLGVSPAKLI--EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKI--LSSHLIIDAMGN 259 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~--~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~--i~ArlVI~ADG~ 259 (549)
...+..+......-.-..+. ..+.+.+.+.|++++.+ +++.+ +++.+.|..++|++ +++|.||.|+|.
T Consensus 71 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~i--d~~~~~V~~~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 71 --KIPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIK--DPTHVIVKTDEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCE
T ss_pred --CCCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEe--cCCeEEEEcCCCcEEEEecCEEEECCCC
Confidence 00000000000000000022 44445555668888776 55554 46788888888887 999999999996
No 126
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.98 E-value=1.1e-05 Score=86.98 Aligned_cols=138 Identities=19% Similarity=0.212 Sum_probs=70.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCcccc---CCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWN---ISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~---IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~ 185 (549)
+|||+||||| +|+++|..|+++|++|+||||....+.. +++ +....+ +... +........+....+.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~-~~~~gciP~k~l--~~~~------~~~~~~~~~~~~~g~~ 95 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGT-CLNVGCIPSKAL--LHAS------EMFHQAQHGLEALGVE 95 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH-HHHHSHHHHHHH--HHHH------HHHHHHHHSSGGGTEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCc-cccccchhhHHH--HHHH------HHHHHHHhhHhhcCcc
Confidence 5999999976 5888999999999999999987544311 111 100100 0000 0000000000000000
Q ss_pred ccCCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC--cEEEcCEEEEccCCC
Q 008915 186 FEGKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNF 260 (549)
Q Consensus 186 f~~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG--~~i~ArlVI~ADG~~ 260 (549)
.. ...+..+...... -....+...+...+...+++++.++... .+++.+.|...+| .++++|.||-|+|..
T Consensus 96 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lViATGs~ 169 (491)
T 3urh_A 96 VA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV---LGQGKVSVTNEKGEEQVLEAKNVVIATGSD 169 (491)
T ss_dssp CC-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---CSSSEEEEECTTSCEEEEECSEEEECCCEE
T ss_pred cC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEEEEEeCCCceEEEEeCEEEEccCCC
Confidence 00 0000000000000 0001223334455566788988876432 4556777877666 479999999999965
No 127
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.98 E-value=1.1e-05 Score=86.25 Aligned_cols=139 Identities=17% Similarity=0.137 Sum_probs=73.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC-CCcccc-CCHHHHHHHHHcCCCCcccchhhh--hhccCCCcc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG-REQEWN-ISRKELLELVESGILVEDDIDEAT--ATKFNPNRC 184 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~-~~r~~~-IS~~~l~~L~~lGl~~~~eie~~i--~~~~~~~~i 184 (549)
+|||+||||| +|+++|..|++.|++|+||||.+..+ ....+. +.... .+....+ .+... ...+ .+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~--l~~~~~~-----~~~~~~~~~~~---g~ 71 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKA--LLHATHL-----YHDAHANFARY---GL 71 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHH--HHHHHHH-----HHHHHHTHHHH---TE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHH--HHHHHHH-----HHHHHHHHHhc---Cc
Confidence 5999999976 58889999999999999999985433 111000 11010 0100000 00000 0000 00
Q ss_pred cccCCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC--cEEEcCEEEEccCCCh
Q 008915 185 GFEGKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFS 261 (549)
Q Consensus 185 ~f~~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG--~~i~ArlVI~ADG~~S 261 (549)
.+.....+..+...... --...+...+.+.+.+.|++++.++.+. .+++.+.|.+.+| .+++++.||.|+|...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p 148 (468)
T 2qae_A 72 MGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF---ETAHSIRVNGLDGKQEMLETKKTIIATGSEP 148 (468)
T ss_dssp ECGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE---EETTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred ccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---eeCCEEEEEecCCceEEEEcCEEEECCCCCc
Confidence 00000000000000000 0001233344555666789998887542 4667888888777 6899999999999743
No 128
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.96 E-value=4.4e-05 Score=81.33 Aligned_cols=98 Identities=19% Similarity=0.255 Sum_probs=76.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+..... +
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~--------------------------------------~--- 206 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT--------------------------------------M--- 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------------------------S---
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc--------------------------------------c---
Confidence 359999976 5999999999999999999986531100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
+ ..+.+.+.+.+++.|++++.+++|+++..+++++.+++++|+++.++.||.|+|..+..
T Consensus 207 -------------~-~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 207 -------------D-LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp -------------C-HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred -------------C-HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 0 12334455666677999999999999998888888888788899999999999988754
No 129
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.96 E-value=7.1e-06 Score=87.45 Aligned_cols=111 Identities=15% Similarity=0.068 Sum_probs=68.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
||||||||| +|+++|..|+++ |++|+|||+.+......+ .+... --|.. . . +.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~------~~~~~-~~g~~-----~-----~-----~~~- 57 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC------GIALY-LGKEI-----K-----N-----NDP- 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG------GHHHH-HTTCB-----G-----G-----GCG-
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc------cchhh-hcCCc-----c-----c-----CCH-
Confidence 699999976 588888899988 999999999874331111 00000 00000 0 0 000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc-C--CcEEEcCEEEEccCCCh
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-E--GKILSSHLIIDAMGNFS 261 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~-d--G~~i~ArlVI~ADG~~S 261 (549)
..+.. . +.+.+.+.|++++.+++++.++.+++.+.+... + +.+++++.||.|+|...
T Consensus 58 --~~~~~--------~-------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 58 --RGLFY--------S-------SPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp --GGGBS--------C-------CHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred --HHhhh--------c-------CHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 00000 0 112234568999999999998776777766542 2 45799999999999643
No 130
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.93 E-value=5.4e-05 Score=81.05 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=76.1
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+.....
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------------------------------ 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 369999976 5999999999999999999986521100
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc-C--Cc--EEEcCEEEEccCCChHH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-E--GK--ILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~-d--G~--~i~ArlVI~ADG~~S~v 263 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..+++++.|+++ + |+ ++.+|+||.|.|..+..
T Consensus 208 ------------~~-~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 208 ------------GD-PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred ------------cC-HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 00 123345566677789999999999999988888888876 6 76 89999999999987654
No 131
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.89 E-value=1.3e-05 Score=86.19 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=69.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.+|||||||| +|+++|..|++. |.+|+|||+.+......+ .+ ..+ ....+ ..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-~~-----~~~--------------~~~~~----~~- 90 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-GL-----PYV--------------ISGAI----AS- 90 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-GH-----HHH--------------HTTSS----SC-
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-Cc-----chh--------------hcCCc----CC-
Confidence 4799999976 588888899986 999999999875432111 01 000 00000 00
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHH-HhcCCEEEeCceEEEEEEECCEEEEEE-cCCc--EEEcCEEEEccCCCh
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNFS 261 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a-~~~G~~v~~~t~v~~i~~~~dgv~V~~-~dG~--~i~ArlVI~ADG~~S 261 (549)
...+.. . ..+.+ ...|++++.+++|+.++.+++.+.+.. .+|+ ++++|.||.|+|...
T Consensus 91 --~~~l~~-~--------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 91 --TEKLIA-R--------------NVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp --GGGGBS-S--------------CHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred --HHHhhh-c--------------CHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcc
Confidence 000000 0 01122 234889999999999987777777765 4566 799999999999643
No 132
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.88 E-value=1e-05 Score=85.88 Aligned_cols=106 Identities=15% Similarity=0.105 Sum_probs=69.1
Q ss_pred cccEEEEcch-HHHHHHHHHHh---CCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr---~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~ 185 (549)
..|||||||| +|+++|..|++ .|++|+|||+.+...... .+..+ ..|.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~-------~~~~~-~~g~-------------------- 55 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP-------SNPWV-GVGW-------------------- 55 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG-------GHHHH-HHTS--------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC-------Ccccc-ccCc--------------------
Confidence 4799999976 59999999998 899999999886321100 00000 0000
Q ss_pred ccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 186 f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
.++..+...+.+.+.+.|++++ ..+++.++.++. .|++++|+++++|.||.|+|..+.
T Consensus 56 ----------------~~~~~~~~~l~~~~~~~gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 56 ----------------KERDDIAFPIRHYVERKGIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp ----------------SCHHHHEEECHHHHHTTTCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCCEEC
T ss_pred ----------------cCHHHHHHHHHHHHHHCCCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcC
Confidence 0111111123344456788887 468888865544 567778889999999999998654
No 133
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.87 E-value=1.8e-05 Score=83.26 Aligned_cols=107 Identities=21% Similarity=0.208 Sum_probs=69.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCc--EEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLR--VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Glr--VlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
++|||||||| +|+++|..|+++|++ |+|||+.+.....+. .++ ..+-.+...
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-~l~-----------------------~~~~~~~~~- 63 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP-PLS-----------------------KEYLAREKT- 63 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG-GGG-----------------------TTTTTTSSC-
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc-cCC-----------------------HHHHcCCCC-
Confidence 6999999976 599999999999988 999999875432111 000 001000000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
...+. ... .+.+.+.+++++.+++++.++.+. ..|.+.+|+++.++.||.|+|..
T Consensus 64 --~~~~~--------~~~-------~~~~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 64 --FERIC--------IRP-------AQFWEDKAVEMKLGAEVVSLDPAA--HTVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp --SGGGB--------SSC-------HHHHHHTTEEEEETCCEEEEETTT--TEEEETTSCEEEEEEEEECCCEE
T ss_pred --HHHhc--------cCC-------HHHHHHCCcEEEeCCEEEEEECCC--CEEEECCCCEEEeeEEEEccCCc
Confidence 00010 000 122345688999999999986544 35677788899999999999953
No 134
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.85 E-value=6.7e-06 Score=88.77 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=68.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCC---CcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKG---LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~G---lrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~ 185 (549)
++|||||||| +|+++|..|++.| .+|+|||+.+......+ .+... ++ .. +
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~------~~~~~--~~------------~~-----~- 88 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGA------GMALW--IG------------EQ-----I- 88 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGG------GHHHH--HT------------TS-----S-
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccc------ccchh--hc------------Cc-----c-
Confidence 4999999976 5888888999988 99999999874331111 00000 00 00 0
Q ss_pred ccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcC-CcEEEcCEEEEccCCCh
Q 008915 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-GKILSSHLIIDAMGNFS 261 (549)
Q Consensus 186 f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~d-G~~i~ArlVI~ADG~~S 261 (549)
.....+.. . +.+.+.+.|++++.+++++.++.+++.+.+...+ +.++++|.||.|+|...
T Consensus 89 -~~~~~~~~--------~-------~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 89 -AGPEGLFY--------S-------DKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp -SCSGGGBS--------C-------CHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred -CCHHHhhh--------c-------CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCc
Confidence 00000100 0 0122345689999999999987766766665211 34799999999999643
No 135
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.84 E-value=2.4e-05 Score=84.10 Aligned_cols=137 Identities=17% Similarity=0.175 Sum_probs=71.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCcccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~-IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
+||||||||| +|+++|..|++.|++|+||||....+....+. +....+..-. .+-..+ .. .....+.
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~n~gciP~k~l~~~~--------~~~~~~-~~--~~~~g~~ 79 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYAS--------DLATRV-SH--ANEYGLY 79 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTTHHHHHHSHHHHHHHHHHH--------HHHHHH-TT--TTTTTBS
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcCCcCcccCcHHHHHHHHHH--------HHHHHH-Hh--HHhcCcc
Confidence 6999999976 58889999999999999999985433211000 1111100000 000000 00 0000110
Q ss_pred C-------Cccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCc--EEEcCEEEEcc
Q 008915 188 G-------KGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK--ILSSHLIIDAM 257 (549)
Q Consensus 188 ~-------~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~--~i~ArlVI~AD 257 (549)
. ...+..+...... --...+...+.+.+.+.|++++.++ ++.+ +++.+.|.+.+|+ ++++|.||.|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~~~~~v~~~~g~~~~~~~d~lviAt 156 (479)
T 2hqm_A 80 QNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--KDGNVEVQKRDNTTEVYSANHILVAT 156 (479)
T ss_dssp TTSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--TTSCEEEEESSSCCEEEEEEEEEECC
T ss_pred cccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eCCEEEEEeCCCcEEEEEeCEEEEcC
Confidence 0 0000000000000 0001233445555666788888774 4443 4556777776776 89999999999
Q ss_pred CCC
Q 008915 258 GNF 260 (549)
Q Consensus 258 G~~ 260 (549)
|..
T Consensus 157 Gs~ 159 (479)
T 2hqm_A 157 GGK 159 (479)
T ss_dssp CEE
T ss_pred CCC
Confidence 964
No 136
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.83 E-value=8.9e-05 Score=79.02 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=74.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.|+|+.+.+-. .
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 205 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-------------------------------S------------ 205 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-------------------------------h------------
Confidence 59999977 599999999999999999998642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|.+++|+++.++.||.|.|..+..
T Consensus 206 -----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 206 -----------FD-PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp -----------SC-HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -----------hh-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 00 013344556667779999999999999876654 77888888899999999999987654
No 137
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.82 E-value=4.1e-05 Score=81.43 Aligned_cols=106 Identities=18% Similarity=0.136 Sum_probs=65.1
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.+|||||||| +|+++|..|++. |++|+|||+.+......+ ++. ... .+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~--------------~~p------~~~-----~~~--- 54 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC--------------GIP------YVV-----EGL--- 54 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc--------------CCc------ccc-----CCC---
Confidence 4799999976 588999999987 899999999874331100 000 000 000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHH-HhcCCEEEeCceEEEEEEECCEEEEEEcCC-cEEEcCEEEEccCCC
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLAEG-KILSSHLIIDAMGNF 260 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a-~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG-~~i~ArlVI~ADG~~ 260 (549)
.++..+.....+.+ .+.|++++.+++|++++ .+...|.++++ .++++|.||-|+|..
T Consensus 55 ---------------~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~--~~~~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 55 ---------------STPDKLMYYPPEVFIKKRGIDLHLNAEVIEVD--TGYVRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp --------------------------CTHHHHTTCEEETTCEEEEEC--SSEEEEECSSSEEEEECSEEEECCCEE
T ss_pred ---------------CCHHHhhhcCHHHHHHhcCcEEEecCEEEEEe--cCCCEEEECCceEEEEcCEEEECCCCC
Confidence 00001111111222 35688999999999874 44567777666 489999999999953
No 138
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.82 E-value=2.9e-05 Score=83.50 Aligned_cols=37 Identities=35% Similarity=0.401 Sum_probs=31.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
.+||||||||| +|+++|..|+++|++|+||||....+
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~GG 62 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRIGG 62 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCCCCC
Confidence 36999999976 58889999999999999999955433
No 139
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.82 E-value=8.4e-06 Score=86.99 Aligned_cols=138 Identities=18% Similarity=0.135 Sum_probs=70.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC-CCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~-~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
+|||+||||| +|+++|..|++.|++|+|||+.+..+ ....+...+ +...+....++ +.. .. ....+.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p-~k~l~~~~~~~-----~~~-~~--~~~g~~~~ 71 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIP-SKALLETTERI-----YEA-KK--GLLGAKVK 71 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHH-HHHHHHHHHHH-----HHH-HH--CCTTEEEC
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchh-HHHHHHHHHHH-----HHH-hh--hcCCcccC
Confidence 4899999975 58889999999999999999985433 111111001 00011100000 001 00 00001110
Q ss_pred CCcccccccccccee-CHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 188 GKGEIWVEDILNLGV-SPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V-~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
. .....+......- -...+...+.+.+.+.|++++.++.+. .+++.+.|.+ +|.+++++.||.|+|...
T Consensus 72 ~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~-~g~~~~~d~lviAtG~~p 141 (455)
T 2yqu_A 72 G-VELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF---LSERKVLVEE-TGEELEARYILIATGSAP 141 (455)
T ss_dssp C-EEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---SSSSEEEETT-TCCEEEEEEEEECCCEEE
T ss_pred C-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEee-CCEEEEecEEEECCCCCC
Confidence 0 0000000000000 001133334555666789998887542 3455666655 677899999999999743
No 140
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.81 E-value=9.2e-05 Score=79.70 Aligned_cols=34 Identities=29% Similarity=0.445 Sum_probs=29.6
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.+||||||||| +|+++|..|++.|++|+||||..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 37999999975 58888999999999999999843
No 141
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.81 E-value=2e-05 Score=83.84 Aligned_cols=108 Identities=15% Similarity=0.152 Sum_probs=67.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
+|||||||| +|+++|..|++. |.+|+|||+.+..+...+ .+.... -+. + .
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~------~~~~~~-~~~-------------~-------~ 53 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA------GMQLYL-EGK-------------V-------K 53 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG------GHHHHH-TTS-------------S-------C
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc------cchhhh-cCc-------------c-------C
Confidence 489999976 588888899987 999999999875431110 000000 000 0 0
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE-cCCc--EEEcCEEEEccCCC
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~dG~--~i~ArlVI~ADG~~ 260 (549)
....+.. . +.+.+.+.|++++.+++++.++.+++.+.+.. .+|+ +++++.||.|+|..
T Consensus 54 ~~~~~~~--------~-------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 54 DVNSVRY--------M-------TGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp CGGGSBS--------C-------CHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CHHHhhc--------C-------CHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCC
Confidence 0000100 0 01223346899999999999877777776654 3455 49999999999964
No 142
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.79 E-value=2.4e-05 Score=83.70 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=30.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
+|||+||||| .|+++|..|+++|++|+||||....
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~~G 40 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYG 40 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTT
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 6999999976 5888999999999999999995443
No 143
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.79 E-value=8.5e-05 Score=79.83 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=28.9
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
.+||||||||| .|+++|..|+++|++|+||||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999999976 5888888999999999999963
No 144
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.79 E-value=3.5e-05 Score=83.28 Aligned_cols=142 Identities=13% Similarity=0.135 Sum_probs=72.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhC---CCcEEEEccCCCCCCCcccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCcc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK---GLRVAIVERNTLKGREQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRC 184 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~---GlrVlLIEr~~~~~~~r~~~-IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i 184 (549)
+||||||||| +|+++|..|+++ |++|+||||....+....+. +.... .+....++ . .+ ..+....+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~GG~~~~~g~~psk~--l~~~a~~~-----~-~~-~~~~~~g~ 72 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKT--FIASTGLR-----T-EL-RRAPHLGF 72 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCTTHHHHHTSHHHHHH--HHHHHHHH-----H-HH-TTTTTTTB
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCcCCcccCcCccchHH--HHHHHHHH-----H-HH-HHHHhCCC
Confidence 5899999976 588899999998 99999999987433211111 11011 01000000 0 00 01100001
Q ss_pred cc-cCCcccccccccccee-CHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE----CCEEEEEEcCCc--EEEcCEEEEc
Q 008915 185 GF-EGKGEIWVEDILNLGV-SPAKLIEIVKKRFISLGGVIFEGYSVSSICTY----ENAAVLLLAEGK--ILSSHLIIDA 256 (549)
Q Consensus 185 ~f-~~~~~l~~~~~l~~~V-~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~----~dgv~V~~~dG~--~i~ArlVI~A 256 (549)
.+ .+...+..+......- -...+...+.+.+.+.|++++.++ ++.++.. ++.+.|..++|+ +++++.||.|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviA 151 (499)
T 1xdi_A 73 HIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVA 151 (499)
T ss_dssp C------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEEC
T ss_pred ccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEc
Confidence 00 0000000000000000 001233445666677899999886 5544321 145667666676 7999999999
Q ss_pred cCCCh
Q 008915 257 MGNFS 261 (549)
Q Consensus 257 DG~~S 261 (549)
+|...
T Consensus 152 TGs~p 156 (499)
T 1xdi_A 152 TGASP 156 (499)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99643
No 145
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.78 E-value=8.2e-05 Score=80.58 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=46.2
Q ss_pred eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC--------EEEEEEcCC-----cEEEcCEEEEccCC
Q 008915 202 VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN--------AAVLLLAEG-----KILSSHLIIDAMGN 259 (549)
Q Consensus 202 V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d--------gv~V~~~dG-----~~i~ArlVI~ADG~ 259 (549)
..+..+.+.|...+.+.+..++++++|+++...++ .++|++.++ ++++||.||.|.|.
T Consensus 142 p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 45677888888888776778999999999987553 478887643 27999999999995
No 146
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.78 E-value=2.4e-05 Score=83.33 Aligned_cols=108 Identities=15% Similarity=0.130 Sum_probs=68.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.|||||||| +|+++|..|+++ |++|+||||.+..+.... ++. .... +...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~--------------~~~------~~~~-----~~~~-- 55 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG--------------GLS------AYFN-----HTIN-- 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc--------------cch------hhhc-----CCCC--
Confidence 699999976 588999999988 999999999875442111 000 0000 0000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc-CCcEEEcCEEEEccCCC
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-EGKILSSHLIIDAMGNF 260 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~-dG~~i~ArlVI~ADG~~ 260 (549)
....+. . .+.+.+.+.|++++.+++|++++.++..+.+... ++.+++++.||-|+|..
T Consensus 56 ~~~~~~--------~-------~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~ 114 (452)
T 3oc4_A 56 ELHEAR--------Y-------ITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGAS 114 (452)
T ss_dssp -----C--------C-------CCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCC
T ss_pred CHHHhh--------c-------CCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcc
Confidence 000000 0 0112234568899999999999887777777633 35589999999999984
No 147
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.76 E-value=6.5e-05 Score=80.32 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=30.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
+||||||||| +|+++|..|+++|++|+||||....
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~G 39 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIG 39 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 6999999976 5888999999999999999998543
No 148
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.74 E-value=3.3e-05 Score=82.84 Aligned_cols=36 Identities=36% Similarity=0.529 Sum_probs=31.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
+|||+||||| .|+++|..|+++|++|+||||....+
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 56 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGG 56 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Confidence 6999999976 58889999999999999999876544
No 149
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.72 E-value=0.00038 Score=72.88 Aligned_cols=105 Identities=20% Similarity=0.311 Sum_probs=79.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++|+.+.... .
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~------------------------------------------~- 180 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA------------------------------------------R- 180 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT------------------------------------------T-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh------------------------------------------h-
Confidence 59999976 599999999999999999998652100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEcCCcEEEcCEEEEccCCCh--HHHHHh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFS--PVVKQI 267 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~dG~~i~ArlVI~ADG~~S--~vrrql 267 (549)
. .+ ..+.+.+.+.+++.|++++.+++++++..+++.+. |.+++|+++.||+||-|.|... .+.+.+
T Consensus 181 ~----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~ 249 (404)
T 3fg2_P 181 V----------VT-PEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAA 249 (404)
T ss_dssp T----------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHT
T ss_pred c----------cC-HHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhC
Confidence 0 00 12445566777788999999999999988777654 7888999999999999999854 456666
Q ss_pred cCC
Q 008915 268 RSG 270 (549)
Q Consensus 268 ~~~ 270 (549)
+..
T Consensus 250 gl~ 252 (404)
T 3fg2_P 250 GLP 252 (404)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
No 150
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.72 E-value=3.2e-05 Score=80.90 Aligned_cols=105 Identities=14% Similarity=0.147 Sum_probs=68.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
..-|+||||| +|+++|..|++.|.+|+|||+.+.....+. .++ . .+.....
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~-~l~-----~--------------~l~g~~~-------- 60 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRP-RLN-----E--------------IIAKNKS-------- 60 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGG-GHH-----H--------------HHHSCCC--------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccC-hhh-----H--------------HHcCCCC--------
Confidence 3569999976 588888899888999999999876442221 011 0 0000000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCC
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~ 259 (549)
...+.. . ..+.+.+.|++++.+++|++++.++. .|++++|+++.+|.||-|+|.
T Consensus 61 ~~~l~~--------~-------~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 61 IDDILI--------K-------KNDWYEKNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp GGGTBS--------S-------CHHHHHHTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred HHHccC--------C-------CHHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 001110 0 01223356899999999999976554 567778889999999999996
No 151
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.71 E-value=4.9e-05 Score=81.38 Aligned_cols=35 Identities=34% Similarity=0.419 Sum_probs=30.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
+||||||||| +|+++|..|++.|++|+|||+....
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~G 41 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVG 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 5999999976 5888888999999999999998743
No 152
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.71 E-value=4.4e-05 Score=80.09 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=66.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCC--cEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~Gl--rVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.|||||||| +|+++|..|+++|+ +|+|||+.+.....+. .++ ..+-.+...
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-~l~-----------------------~~~l~~~~~-- 55 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP-PLS-----------------------KAYLKSGGD-- 55 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG-GGG-----------------------TGGGGSCCC--
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc-cCC-----------------------HHHHCCCCC--
Confidence 489999976 58899999999999 8999999874332111 000 000000000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
...+.. . ..+.+.+.+++++. ++++.++.+.. .|.+.+|+++.++.||-|+|..
T Consensus 56 -~~~~~~--------~-------~~~~~~~~~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 56 -PNSLMF--------R-------PEKFFQDQAIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp -TTSSBS--------S-------CHHHHHHTTEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCEE
T ss_pred -HHHccC--------C-------CHHHHHhCCCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCCC
Confidence 000100 0 01223346888888 99999865544 5667788899999999999963
No 153
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.70 E-value=0.0002 Score=76.67 Aligned_cols=97 Identities=19% Similarity=0.205 Sum_probs=75.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+-. . +
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~-------~---- 205 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-------------------------------Q-------F---- 205 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T-------S----
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-------------------------------c-------c----
Confidence 59999976 599999999999999999998642100 0 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCc-EEEcCEEEEccCCChHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~-~i~ArlVI~ADG~~S~v 263 (549)
+ ..+.+.+.+.+++.|++++.+++++++..+++++.|++++|+ ++.+|.||.|.|..+..
T Consensus 206 ------------~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 206 ------------D-PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ------------C-HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred ------------C-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 0 012234556667789999999999999988788888888898 89999999999987643
No 154
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.69 E-value=1.1e-05 Score=85.35 Aligned_cols=105 Identities=20% Similarity=0.178 Sum_probs=65.7
Q ss_pred cccEEEEcch-HHHHHHHHHHh--CCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSF--KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr--~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.+|||||||| +|+++|..|++ .|++|+|||+.+...... .+..+ ..|..+ .
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~-------~~~~~-~~g~~~-------------~----- 55 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP-------AFPHL-AMGWRK-------------F----- 55 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG-------GHHHH-HHTCSC-------------G-----
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC-------Ccchh-ccCccC-------------H-----
Confidence 3689999976 58889999999 899999999986432110 00000 001100 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
..+..+ +.+.+.+.|++++. .+++.++.+.. .|.+++++++++|.||.|+|...
T Consensus 56 ---~~~~~~---------------~~~~~~~~gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 56 ---EDISVP---------------LAPLLPKFNIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp ---GGSEEE---------------STTTGGGGTEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred ---HHHHHH---------------HHHHHHhcCCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCccc
Confidence 000000 01122345788876 48888765444 56777888899999999999763
No 155
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.69 E-value=5.1e-05 Score=83.63 Aligned_cols=110 Identities=15% Similarity=0.071 Sum_probs=70.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
..||+||||| +|+++|..|+++ |++|+||||.+..+...+ .+.. .+ .+.+.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~------~lp~--------------~~-----~g~~~- 89 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANC------GLPY--------------YI-----GGVIT- 89 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG------GHHH--------------HH-----TTSSC-
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCC------CCch--------------hh-----cCcCC-
Confidence 5899999976 588999999988 999999999876442111 0000 00 00000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE-cCCc--EEEcCEEEEccCCC
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~dG~--~i~ArlVI~ADG~~ 260 (549)
....+. ...+...+...|++++.+++|++++.+++.+.+.. .+|. +++++.||.|+|..
T Consensus 90 -~~~~~~--------------~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 90 -ERQKLL--------------VQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp -CGGGGB--------------SSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -ChHHhh--------------ccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCC
Confidence 000000 00112223346889999999999988777777764 3455 78999999999963
No 156
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.68 E-value=2.9e-05 Score=80.60 Aligned_cols=103 Identities=16% Similarity=0.116 Sum_probs=64.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-||+||||| +|+++|..|++.| +|+|||+.+.....+. .++ . .+ .| .+.+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~-~l~-~---~~--~g------------------~~~~--- 59 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKP-MLS-H---YI--AG------------------FIPR--- 59 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCST-THH-H---HH--TT------------------SSCG---
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccc-hhH-H---HH--hC------------------CCCH---
Confidence 589999976 5888888999999 9999999875432111 010 0 00 01 0000
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
..+.. . . .+.+.+.|++++.+++++.++.+. ..|+ .+|+++++|.||-|+|..
T Consensus 60 ~~~~~-~----------~----~~~~~~~~v~~~~g~~v~~id~~~--~~V~-~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 60 NRLFP-Y----------S----LDWYRKRGIEIRLAEEAKLIDRGR--KVVI-TEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp GGGCS-S----------C----HHHHHHHTEEEECSCCEEEEETTT--TEEE-ESSCEEECSEEEECCCEE
T ss_pred HHhcc-C----------C----HHHHHhCCcEEEECCEEEEEECCC--CEEE-ECCcEEECCEEEECCCCC
Confidence 00100 0 0 112234588999999998886543 3455 577889999999999964
No 157
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.68 E-value=2.6e-05 Score=81.83 Aligned_cols=104 Identities=15% Similarity=0.118 Sum_probs=64.7
Q ss_pred ccEEEEcch-HHHHHHHHHHh---CCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 111 FDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr---~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.|||||||| +|+++|..|++ .|++|+|||+++....... +. ....+..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~----------------~~----------~~~~~~~-- 53 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA----------------LP----------HVAIGVR-- 53 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS----------------SC----------CCCSSCC--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc----------------hh----------hcccCCc--
Confidence 479999976 58899999999 8999999999873211000 00 0000000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCc----EEEcCEEEEccCCCh
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK----ILSSHLIIDAMGNFS 261 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~----~i~ArlVI~ADG~~S 261 (549)
....+ . ..+.+.+.+.|++++.+ +|+.++.++..++ ++++. ++++|.||.|+|...
T Consensus 54 -~~~~~--------~-------~~~~~~~~~~gv~~~~~-~v~~i~~~~~~V~--~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 54 -DVDEL--------K-------VDLSEALPEKGIQFQEG-TVEKIDAKSSMVY--YTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp -CCCCE--------E-------EEHHHHTGGGTCEEEEC-EEEEEETTTTEEE--EECTTSCEEEEECSEEEECCCCEE
T ss_pred -CHHHH--------H-------HHHHHHHhhCCeEEEEe-eEEEEeCCCCEEE--EccCCcccceeeCCEEEECCCCCc
Confidence 00010 0 11233444568999877 8888876555444 44443 499999999999854
No 158
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.65 E-value=0.00024 Score=79.97 Aligned_cols=51 Identities=10% Similarity=0.160 Sum_probs=40.1
Q ss_pred HHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc---CCcEEEcCEEEEccCCC
Q 008915 208 IEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNF 260 (549)
Q Consensus 208 ~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---dG~~i~ArlVI~ADG~~ 260 (549)
...+.+.+++.|++++.+++|+++. ++++.+... +++++.||.||-|.|..
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~--~~~~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVG--AGGVTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEE--TTEEEEEETTTCCEEEEECSEEEEESCEE
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEE--CCeEEEEEccCCeEEEEECCEEEECCCCC
Confidence 4567778888899999999999985 456666542 34589999999999964
No 159
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.64 E-value=6.3e-05 Score=81.28 Aligned_cols=107 Identities=21% Similarity=0.221 Sum_probs=71.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
++||+||||| +|+++|..|+++ ++|+|||+.+.++.... .. . ..+ ..+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~-~~--------------~---------~~~----~g~-- 156 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW-LK--------------G---------IKQ----EGF-- 156 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG-GT--------------C---------SEE----TTT--
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee-cc--------------c---------ccc----CCC--
Confidence 5899999976 599999999999 99999999875432100 00 0 000 000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE-cCCc--EEEcCEEEEccCCC
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~dG~--~i~ArlVI~ADG~~ 260 (549)
+. +...+...+.+.+ ..+++++.++++.++..+++.+.+.. ++++ +++++.||.|+|..
T Consensus 157 ------~~------~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 157 ------NK------DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp ------TE------EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred ------CC------CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 00 1233444444444 56889999999999887776665544 3454 69999999999964
No 160
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.63 E-value=0.00026 Score=75.32 Aligned_cols=97 Identities=21% Similarity=0.265 Sum_probs=74.2
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-+|+||||| .|+-+|..|++.|.+|.|+|+.+... . .
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------------------~---------------------~ 208 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL---------------------S---------------------G 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------------------T---------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc---------------------c---------------------c
Confidence 469999976 59999999999999999999864211 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc---CCcEEEcCEEEEccCCChH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---dG~~i~ArlVI~ADG~~S~ 262 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..+++++.+++. +++++.++.||.|.|....
T Consensus 209 ------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 209 ------------FE-KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred ------------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 00 123344566677789999999999999888777777765 3468999999999997754
No 161
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.63 E-value=3.9e-05 Score=81.89 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEE--CCEE-EEEEcCCcEEEcCEEEEccCCChH
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICTY--ENAA-VLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~--~dgv-~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
.+-+.|.+.+++.|++++.+++|+++..+ ++++ .|.+ +|++++|+.||.|.|..+.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 46677888888889999999999999988 6665 3555 6888999999999998864
No 162
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.62 E-value=0.00026 Score=76.03 Aligned_cols=97 Identities=21% Similarity=0.372 Sum_probs=76.1
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+|+||| .|+-+|..|++.|.+|.++++.+..-. .+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-------------------------------~~---------- 230 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR-------------------------------NF---------- 230 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------TS----------
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc-------------------------------cc----------
Confidence 368999976 599999999999999999998652100 00
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
+ ..+.+.+.+.+++.|++++.+++|+++..+++++.|.+++|+++.||.||.|.|..+.
T Consensus 231 -------------~-~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 231 -------------D-YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp -------------C-HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred -------------C-HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 0 1233445666777899999999999999888888899988989999999999998654
No 163
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.61 E-value=0.00038 Score=73.09 Aligned_cols=105 Identities=16% Similarity=0.236 Sum_probs=79.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++|+.+.+-. .
T Consensus 154 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~------------------------------------------~- 190 (415)
T 3lxd_A 154 NAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA------------------------------------------R- 190 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------------------------------T-
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh------------------------------------------h-
Confidence 58999976 599999999999999999998653110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE-EEEEcCCcEEEcCEEEEccCCChH--HHHHh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP--VVKQI 267 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~dG~~i~ArlVI~ADG~~S~--vrrql 267 (549)
. .+ ..+.+.+.+.+++.|++++.+++++++..+++.+ .|.+++|+++.||+||-|.|.... +.+.+
T Consensus 191 ~----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~ 259 (415)
T 3lxd_A 191 V----------AG-EALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISA 259 (415)
T ss_dssp T----------SC-HHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHT
T ss_pred h----------cC-HHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhC
Confidence 0 00 1234556667778899999999999998776665 578888999999999999998654 55555
Q ss_pred cCC
Q 008915 268 RSG 270 (549)
Q Consensus 268 ~~~ 270 (549)
+..
T Consensus 260 gl~ 262 (415)
T 3lxd_A 260 GAS 262 (415)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
No 164
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.61 E-value=0.0001 Score=78.93 Aligned_cols=116 Identities=14% Similarity=0.071 Sum_probs=61.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
..||+||||| +|+++|..|+++ |++|+||||.+.....++ |+.. .+ .+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~--------------gl~~------~~-----~g~~~~ 57 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGC--------------GIPY------YV-----SGEVSN 57 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccccc--------------ccch------hh-----cCCCCc
Confidence 4699999976 699999999988 999999999875431110 1100 00 000000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE-cCCc--EEEcCEEEEccCCC
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~dG~--~i~ArlVI~ADG~~ 260 (549)
...+. +. +..+...+.......|++++.+++|++++.++..+.+.. .+|. +++++.||.|+|..
T Consensus 58 --~~~~~-~~-------~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 58 --IESLQ-AT-------PYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ---------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred --hHHhc-cc-------cchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCC
Confidence 00000 00 000111111122235789999999999987777777664 2355 79999999999963
No 165
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.61 E-value=0.00033 Score=74.98 Aligned_cols=98 Identities=17% Similarity=0.226 Sum_probs=73.5
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.++|+.+..... +
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~----------------------- 222 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS------------------M----------------------- 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS------------------S-----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc------------------c-----------------------
Confidence 359999976 5999999999999999999987521100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEE--ECCEEEEEEc-----CCcEEEcCEEEEccCCChH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT--YENAAVLLLA-----EGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~--~~dgv~V~~~-----dG~~i~ArlVI~ADG~~S~ 262 (549)
+ ..+.+.+.+.+++.|++++.+++++++.. +++.+.|.++ +++++.++.||.|.|....
T Consensus 223 -------------~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 223 -------------D-GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp -------------C-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEEC
T ss_pred -------------C-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcC
Confidence 0 12344556677778999999999999987 4556677765 3468999999999997654
Q ss_pred H
Q 008915 263 V 263 (549)
Q Consensus 263 v 263 (549)
.
T Consensus 289 ~ 289 (478)
T 1v59_A 289 I 289 (478)
T ss_dssp C
T ss_pred C
Confidence 3
No 166
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.61 E-value=0.00011 Score=79.33 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=27.9
Q ss_pred cccEEEEcch-HHHHHHHHHHh-CCCcEEEEcc
Q 008915 110 TFDVIVCGGT-LGIFIATALSF-KGLRVAIVER 140 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr-~GlrVlLIEr 140 (549)
+|||+||||| +|+++|..|++ .|++|+|||+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 6999999976 58889999999 9999999993
No 167
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.60 E-value=4.5e-05 Score=82.47 Aligned_cols=34 Identities=35% Similarity=0.544 Sum_probs=30.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
+||||||||| +|+++|..|++.|++|+|||+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 36 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRL 36 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSST
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 5999999976 588899999999999999999864
No 168
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.57 E-value=0.00056 Score=73.08 Aligned_cols=106 Identities=17% Similarity=0.238 Sum_probs=80.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhC-CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 111 FDVIVCGGT-LGIFIATALSFK-GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~-GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
-.|+|+||| .|+-+|..|++. |.+|.++|+.+.....
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~----------------------------------------- 198 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG----------------------------------------- 198 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-----------------------------------------
Confidence 369999976 599999999999 9999999986421000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC--hHHHHH
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF--SPVVKQ 266 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~--S~vrrq 266 (549)
. .+ ..+.+.+.+.+++.|++++.+++++++..+++.+.|.+++|+++.+|.||-|.|.. +.+.+.
T Consensus 199 --~----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~ 265 (472)
T 3iwa_A 199 --F----------TS-KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARD 265 (472)
T ss_dssp --T----------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHH
T ss_pred --c----------cC-HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHh
Confidence 0 01 12445566777788999999999999988777788888888899999999999985 346666
Q ss_pred hcCC
Q 008915 267 IRSG 270 (549)
Q Consensus 267 l~~~ 270 (549)
+++.
T Consensus 266 ~gl~ 269 (472)
T 3iwa_A 266 AGLE 269 (472)
T ss_dssp HTCC
T ss_pred CCcc
Confidence 6654
No 169
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.56 E-value=0.00028 Score=76.65 Aligned_cols=34 Identities=35% Similarity=0.467 Sum_probs=30.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
+||||||||| +|+++|..|++.|++|+|||+...
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 6999999976 588899999999999999999873
No 170
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.56 E-value=4.3e-05 Score=77.70 Aligned_cols=43 Identities=12% Similarity=0.109 Sum_probs=35.3
Q ss_pred ccCCcEEEeCCCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHh
Q 008915 385 AAFNRILQFGDASGIQSPVSFGG--FGSLTRHLGRLSTGVYEAVR 427 (549)
Q Consensus 385 ~~~~rvlLVGDAA~~v~Pltg~G--~g~~lrd~~~La~~i~~Al~ 427 (549)
+.-++++.+||||..++++...| |+.|+.+..+.|+.|.++|+
T Consensus 281 t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 281 AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 34578999999999999988767 66777777788888988875
No 171
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.55 E-value=0.00022 Score=74.95 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=67.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC--cEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Gl--rVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.+||+||||| +|+++|..|+++|. +|+|||+.+.....+. .++. ..+.... .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~~~~------------------~~~~~~~------~ 61 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP-PLSK------------------DFMAHGD------A 61 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG-GGGT------------------HHHHHCC------G
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC-CCCH------------------HHhCCCc------h
Confidence 6899999976 58889999999998 4999999864331111 0110 0000000 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
..+. +. .+.+.|++++.+++|+.++.+. ..|++++|++++++.||.|+|...
T Consensus 62 ---~~~~--------~~----------~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 62 ---EKIR--------LD----------CKRAPEVEWLLGVTAQSFDPQA--HTVALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp ---GGSB--------CC----------CTTSCSCEEEETCCEEEEETTT--TEEEETTSCEEECSEEEECCCEEE
T ss_pred ---hhhh--------HH----------HHHHCCCEEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCCCCC
Confidence 0000 01 1234588999999999986543 356677888999999999999754
No 172
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.54 E-value=6.7e-05 Score=78.93 Aligned_cols=105 Identities=17% Similarity=0.236 Sum_probs=68.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCc--EEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLR--VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~Glr--VlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.||+||||| +|+++|..|+++|++ |+|||+.+.....+. .++.. .......+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~-~l~~~------------------~~~g~~~~------ 57 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP-SLSKA------------------VLDGSLER------ 57 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG-GGGTH------------------HHHTSSSS------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc-cccHH------------------HhCCCCCH------
Confidence 589999976 588999999999988 999999875432211 11100 11000000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
..+ .. . .+.+.+.+++++.+++++.++.+.. .|.+.+|+++.++.||-|+|..
T Consensus 58 --~~~-~~--------~-------~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 58 --PPI-LA--------E-------ADWYGEARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp --CCB-SS--------C-------TTHHHHTTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred --HHh-cC--------C-------HHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 001 00 0 0112346899999999999865443 5677788899999999999964
No 173
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.53 E-value=0.00032 Score=74.41 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=72.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
..+|+||||| .|+.+|..|++.|.+|.|+|+.+.+... +
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~--------- 188 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------------------------Y--------- 188 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------T---------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------------------------c---------
Confidence 4689999976 5999999999999999999987521100 0
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE-EEEEcCCcEEEcCEEEEccCCChH
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..+ +.+ .|.+ ++.++.++.||.|.|....
T Consensus 189 -------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 189 -------------LD-KEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp -------------CC-HHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred -------------CC-HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 00 123456667777889999999999999755 433 3555 5678999999999997654
No 174
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.52 E-value=4.3e-05 Score=82.04 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccC
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 258 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG 258 (549)
.+-+.|.+.+.+.|++++.+++|+++..++.. +++.+|++++|+.||-+.-
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCC
Confidence 46667777777789999999999999876654 4567899999999997654
No 175
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.51 E-value=0.00026 Score=75.74 Aligned_cols=34 Identities=38% Similarity=0.589 Sum_probs=30.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
+||||||||| +|+++|..|++.|++|+|||+...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 38 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKAL 38 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 6999999976 588899999999999999999854
No 176
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.50 E-value=0.0002 Score=78.27 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=29.8
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
.+||||||||| .|.++|..+|+.|.||+|||+...
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 36999999976 577788899999999999997654
No 177
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.50 E-value=0.00018 Score=74.82 Aligned_cols=106 Identities=10% Similarity=0.064 Sum_probs=64.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCC--CcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~G--lrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
+||||||||| +|+++|..|+++| .+|+|+|+.......+. .+ ... +
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~-~l-------------------~~~----~------- 52 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKP-ML-------------------STG----F------- 52 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGG-GG-------------------GGT----T-------
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcc-cc-------------------cHH----H-------
Confidence 5899999976 5888888999999 56899998752110000 00 000 0
Q ss_pred cCCccccccccccceeCHHHHHH-HHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIE-IVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~-~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
.... ....+.. .+.+.+.+.|++++.+++++.++.++. +|.+. +.+++++.||.|+|...
T Consensus 53 ~~~~------------~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~-~~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 53 SKNK------------DADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQ--RIWIG-EEEVRYRDLVLAWGAEP 113 (384)
T ss_dssp TTTC------------CHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGT--EEEET-TEEEECSEEEECCCEEE
T ss_pred hCCC------------CHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCC--EEEEC-CcEEECCEEEEeCCCCc
Confidence 0000 0111110 112233456889999998888865444 44554 45799999999999754
No 178
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.47 E-value=0.00047 Score=74.91 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=79.2
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.++|+.+..- . .
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l---------------------~---------------------~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK---------------------L---------------------I 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT---------------------T---------------------C
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc---------------------c---------------------c
Confidence 469999977 59999999999999999999865210 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE----EEEEEcCCc-EEEcCEEEEccCCChHH-
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA----AVLLLAEGK-ILSSHLIIDAMGNFSPV- 263 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg----v~V~~~dG~-~i~ArlVI~ADG~~S~v- 263 (549)
.+ ..+.+.|.+.+++.|++++.+++|+++..++++ +.|.+++|+ ++.|+.||-|.|..+..
T Consensus 253 ------------~~-~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 253 ------------KD-NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp ------------CS-HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred ------------cc-HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 00 123345666777889999999999999876665 778887887 89999999999987653
Q ss_pred --HHHhcCC
Q 008915 264 --VKQIRSG 270 (549)
Q Consensus 264 --rrql~~~ 270 (549)
.+.+++.
T Consensus 320 ~~l~~~gl~ 328 (523)
T 1mo9_A 320 ELAKILGLD 328 (523)
T ss_dssp HHHHHHTCC
T ss_pred cCHHHcCCc
Confidence 4555543
No 179
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.46 E-value=0.00033 Score=73.61 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=78.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.++|+.+.+- +. .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l--------~~------------------~--------------- 182 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL--------VR------------------V--------------- 182 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------HH------------------H---------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc--------hh------------------h---------------
Confidence 359999976 59999999999999999999865211 00 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH--HHHHh
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQI 267 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~--vrrql 267 (549)
++ ..+.+.+.+.+++.|++++.+++++++..++....|.+++|+++.||+||-|.|..+. +.+.+
T Consensus 183 ------------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~ 249 (410)
T 3ef6_A 183 ------------LG-RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQA 249 (410)
T ss_dssp ------------HC-HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHT
T ss_pred ------------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhC
Confidence 00 1234455666677899999999999997655444688889999999999999998653 55666
Q ss_pred cCC
Q 008915 268 RSG 270 (549)
Q Consensus 268 ~~~ 270 (549)
++.
T Consensus 250 gl~ 252 (410)
T 3ef6_A 250 GLA 252 (410)
T ss_dssp TCC
T ss_pred CCc
Confidence 543
No 180
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.45 E-value=0.00081 Score=71.16 Aligned_cols=105 Identities=15% Similarity=0.228 Sum_probs=76.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+-. .
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~------------ 187 (431)
T 1q1r_A 151 RLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-------------------------------R------------ 187 (431)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------c------------
Confidence 59999976 599999999999999999998642110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEE--ECCEE-EEEEcCCcEEEcCEEEEccCCCh--HHHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT--YENAA-VLLLAEGKILSSHLIIDAMGNFS--PVVK 265 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~--~~dgv-~V~~~dG~~i~ArlVI~ADG~~S--~vrr 265 (549)
. ++ ..+.+.+.+.+++.|++++.+++++++.. +++.+ .|.+++|+++.++.||.|.|... .+.+
T Consensus 188 ~----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~ 256 (431)
T 1q1r_A 188 V----------TA-PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELAS 256 (431)
T ss_dssp T----------SC-HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHH
T ss_pred h----------hh-HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhh
Confidence 0 00 12334455666778999999999999986 44454 57788888999999999999653 4566
Q ss_pred HhcCC
Q 008915 266 QIRSG 270 (549)
Q Consensus 266 ql~~~ 270 (549)
.++..
T Consensus 257 ~~gl~ 261 (431)
T 1q1r_A 257 AAGLQ 261 (431)
T ss_dssp HTTCC
T ss_pred ccCCC
Confidence 65543
No 181
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.44 E-value=0.00051 Score=73.70 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=73.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-. .
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 223 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-------------------------------K------------ 223 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-------------------------------c------------
Confidence 59999976 599999999999999999998652110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE--EEEEEcCC-cEEEcCEEEEccCCChHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEG-KILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg--v~V~~~dG-~~i~ArlVI~ADG~~S~v 263 (549)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|.+++| +++.+|.||.|.|.....
T Consensus 224 -----------~d-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 224 -----------FD-ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp -----------SC-HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred -----------cC-HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 00 112334555666779999999999999876555 77888888 789999999999976553
No 182
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.42 E-value=0.00067 Score=73.12 Aligned_cols=97 Identities=15% Similarity=0.240 Sum_probs=75.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++|+.+..- ..
T Consensus 184 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l---------------------~~---------------------- 220 (499)
T 1xdi_A 184 HLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL---------------------PY---------------------- 220 (499)
T ss_dssp SEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS---------------------CC----------------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc---------------------cc----------------------
Confidence 58999976 59999999999999999999764210 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
++ ..+.+.+.+.+++.|++++.+++|+++..+++++.|.+.+|+++.||.||-|.|..+..
T Consensus 221 -----------~d-~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 221 -----------ED-ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp -----------SS-HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred -----------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 00 12334556677788999999999999988777788888788899999999999987654
No 183
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.42 E-value=0.0011 Score=69.59 Aligned_cols=102 Identities=19% Similarity=0.331 Sum_probs=75.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.++|+.+.+-.. .
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~------------------------ 184 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR-----------------A------------------------ 184 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------T------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------c------------------------
Confidence 469999976 5999999999999999999987521100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh--HHHHHh
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS--PVVKQI 267 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S--~vrrql 267 (549)
++ ..+.+.+.+.+++.|++++.+++++++. ++ .|.+++|+++.+|.||-|.|... .+.+.+
T Consensus 185 ------------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~ 247 (408)
T 2gqw_A 185 ------------AP-ATLADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLANDALARAA 247 (408)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEECCHHHHHH
T ss_pred ------------cC-HHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCccHHHHHhC
Confidence 00 1233455666777899999999999997 44 56777888999999999999764 455666
Q ss_pred cCC
Q 008915 268 RSG 270 (549)
Q Consensus 268 ~~~ 270 (549)
+..
T Consensus 248 gl~ 250 (408)
T 2gqw_A 248 GLA 250 (408)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
No 184
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.41 E-value=0.00068 Score=72.33 Aligned_cols=96 Identities=13% Similarity=0.181 Sum_probs=72.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-. .
T Consensus 176 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------~---------------------- 212 (468)
T 2qae_A 176 TMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP---------------------T---------------------- 212 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------T----------------------
T ss_pred eEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc---------------------c----------------------
Confidence 58999976 599999999999999999998642110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHH-HhcCCEEEeCceEEEEEEECCEEEEEEc--CC--cEEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLA--EG--KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a-~~~G~~v~~~t~v~~i~~~~dgv~V~~~--dG--~~i~ArlVI~ADG~~S~ 262 (549)
++ ..+.+.+.+.+ ++.|++++.+++++++..+++++.|.++ +| +++.+|.||-|.|..+.
T Consensus 213 -----------~d-~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 213 -----------LD-EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp -----------SC-HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred -----------CC-HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 00 12334566667 7789999999999999887777777775 56 58999999999998764
No 185
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.40 E-value=0.0014 Score=72.21 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=29.7
Q ss_pred CCcccEEEEcch-HHHHHHHHHHhCCCcEEEEccC
Q 008915 108 VGTFDVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 108 ~~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
..+|||+||||| +|+++|..|+++|++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 347999999965 5888999999999999999984
No 186
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.38 E-value=0.00096 Score=71.29 Aligned_cols=104 Identities=11% Similarity=0.172 Sum_probs=76.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-.. .
T Consensus 180 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------~------------ 217 (474)
T 1zmd_A 180 KMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV------------------------------G------------ 217 (474)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS------------------------------S------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc------------------------------c------------
Confidence 59999976 5999999999999999999986521100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EEEEE-----cCCcEEEcCEEEEccCCChHH-
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLL-----AEGKILSSHLIIDAMGNFSPV- 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~-----~dG~~i~ArlVI~ADG~~S~v- 263 (549)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.+++ .+++++.++.||.|.|.....
T Consensus 218 -----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 218 -----------ID-MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp -----------CC-HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred -----------cC-HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 00 123345566677789999999999999877766 77764 346689999999999977543
Q ss_pred ---HHHhcC
Q 008915 264 ---VKQIRS 269 (549)
Q Consensus 264 ---rrql~~ 269 (549)
.+.+++
T Consensus 286 ~l~l~~~g~ 294 (474)
T 1zmd_A 286 NLGLEELGI 294 (474)
T ss_dssp TSSHHHHTC
T ss_pred cCCchhcCC
Confidence 445544
No 187
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.36 E-value=0.0006 Score=72.69 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=30.1
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
+||||||||| +|+++|..|++.|++|+|||+....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~G 40 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQALG 40 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCCCC
Confidence 6999999976 5888888999999999999995443
No 188
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.36 E-value=0.00017 Score=78.88 Aligned_cols=109 Identities=12% Similarity=0.048 Sum_probs=68.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.||+||||| +|+++|..|+++ |++|+|||+.+.....+. . +.. .+...+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~-~-----l~~--------------~~~~~~~~------ 55 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC-G-----LPY--------------HISGEIAQ------ 55 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-G-----HHH--------------HHTSSSCC------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc-C-----chH--------------HhcCCcCC------
Confidence 489999976 698999999988 899999999876442211 0 000 00000000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE-cCCc--EEEcCEEEEccCCC
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~dG~--~i~ArlVI~ADG~~ 260 (549)
...+. .+. .+.+ +...|++++.+++|++++.+...+.+.. .+|. ++++|.||-|+|..
T Consensus 56 -~~~~~--------~~~---~~~~---~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 56 -RSALV--------LQT---PESF---KARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp -GGGGB--------CCC---HHHH---HHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -hHHhh--------ccC---HHHH---HHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 00000 000 0111 2235889999999999988777777664 2343 79999999999973
No 189
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.34 E-value=0.0013 Score=70.89 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=74.0
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+-. .
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 214 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-------------------------------K------------ 214 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-------------------------------T------------
T ss_pred eEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-------------------------------c------------
Confidence 58999976 599999999999999999998652110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EEEEEcCCcE-EEcCEEEEccCCChHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKI-LSSHLIIDAMGNFSPV 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~dG~~-i~ArlVI~ADG~~S~v 263 (549)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|.+++|++ +.+|.||-|.|.....
T Consensus 215 -----------~d-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 215 -----------FD-ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred -----------cc-hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 00 112344566677789999999999999876544 7788888887 9999999999987654
No 190
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.33 E-value=0.00084 Score=72.02 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=75.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.|+|+.+..- ..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l---------------------~~---------------------- 223 (482)
T 1ojt_A 187 KLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM---------------------QG---------------------- 223 (482)
T ss_dssp EEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS---------------------TT----------------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc---------------------cc----------------------
Confidence 59999976 59999999999999999999865211 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcC----CcEEEcCEEEEccCCChHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE----GKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~d----G~~i~ArlVI~ADG~~S~v 263 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..+++++.|.+++ |+++.+|.||.|.|.....
T Consensus 224 -----------~~-~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 224 -----------AD-RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp -----------SC-HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred -----------cC-HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 00 1233445666777899999999999998887788888776 7789999999999987654
No 191
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.31 E-value=0.001 Score=71.68 Aligned_cols=97 Identities=12% Similarity=0.167 Sum_probs=74.6
Q ss_pred cEEEEcch-HHHHHHHHHHhC---CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 112 DVIVCGGT-LGIFIATALSFK---GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~---GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.|+||||| .|+-+|..|++. |.+|.++|+.+..- ..
T Consensus 189 ~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l---------------------~~------------------- 228 (490)
T 1fec_A 189 RALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL---------------------RG------------------- 228 (490)
T ss_dssp EEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS---------------------TT-------------------
T ss_pred eEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc---------------------cc-------------------
Confidence 69999976 599999999998 99999999865210 00
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC-EEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
++ ..+.+.+.+.+++.|++++.+++|+++..+++ .+.|.+++|+++.++.||.|.|.....
T Consensus 229 --------------~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 229 --------------FD-SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp --------------SC-HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred --------------cC-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 00 12334566667778999999999999987665 477888888899999999999987653
No 192
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.31 E-value=0.00014 Score=78.60 Aligned_cols=35 Identities=29% Similarity=0.458 Sum_probs=30.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHh-CCCcEEEEccCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSF-KGLRVAIVERNTL 143 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr-~GlrVlLIEr~~~ 143 (549)
++||+|||||| +|+.+|..|++ .|++|+|||++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 47999999976 58899999998 6899999999865
No 193
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.31 E-value=0.00018 Score=77.74 Aligned_cols=31 Identities=32% Similarity=0.434 Sum_probs=27.8
Q ss_pred cccEEEEcch-HHHHHHHHHHh-CCCcEEEEcc
Q 008915 110 TFDVIVCGGT-LGIFIATALSF-KGLRVAIVER 140 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr-~GlrVlLIEr 140 (549)
+||||||||| +|+++|..|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 6999999976 58888889999 9999999994
No 194
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.31 E-value=0.00029 Score=75.98 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=35.0
Q ss_pred hcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 217 SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 217 ~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
+.|++++.+++|++++.+.. +|++++|+++.++.||.|+|...
T Consensus 102 ~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTP 144 (493)
T ss_dssp TCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEE
T ss_pred cCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCC
Confidence 45789999999999876544 56677888999999999999653
No 195
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.30 E-value=0.00017 Score=77.64 Aligned_cols=55 Identities=15% Similarity=0.106 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEE-ECCE-EEEEEcCCcEEEcCEEEEccCCC
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICT-YENA-AVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~-~~dg-v~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
.|-+.|.+.+++.|++++.+++|+++.. +++. +.|.+.+|++++|+.||.|.|..
T Consensus 257 ~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4667788888889999999999999988 4444 34777788899999999999977
No 196
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.30 E-value=0.0017 Score=69.81 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=73.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+.... .
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 236 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG-------------------------------G------------ 236 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS-------------------------------S------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc-------------------------------c------------
Confidence 58999976 599999999999999999987642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcC---C--cEEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---G--KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~d---G--~~i~ArlVI~ADG~~S~ 262 (549)
++ ..+.+.+.+.+++.|++++.+++++++..+++++.|.+.+ | +++.+|.||.|.|....
T Consensus 237 -----------~d-~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 237 -----------MD-GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred -----------CC-HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 00 1233455666777899999999999999988888887753 5 58999999999998654
No 197
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.30 E-value=0.0016 Score=71.13 Aligned_cols=104 Identities=18% Similarity=0.296 Sum_probs=78.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------- 189 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP------------------------------------------- 189 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-------------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-------------------------------------------
Confidence 69999976 5999999999999999999986421100
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE-------------------CCEEEEEEcCCcEEEcC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-------------------ENAAVLLLAEGKILSSH 251 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-------------------~dgv~V~~~dG~~i~Ar 251 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..+ ++++.+.+.+|+++.||
T Consensus 190 -----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D 257 (565)
T 3ntd_A 190 -----------VD-REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETD 257 (565)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEES
T ss_pred -----------cC-HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcC
Confidence 00 122344556677789999999999999873 56778888888899999
Q ss_pred EEEEccCCCh--HHHHHhcCC
Q 008915 252 LIIDAMGNFS--PVVKQIRSG 270 (549)
Q Consensus 252 lVI~ADG~~S--~vrrql~~~ 270 (549)
.||-|.|... .+.+.+++.
T Consensus 258 ~vi~a~G~~p~~~l~~~~g~~ 278 (565)
T 3ntd_A 258 LLIMAIGVRPETQLARDAGLA 278 (565)
T ss_dssp EEEECSCEEECCHHHHHHTCC
T ss_pred EEEECcCCccchHHHHhCCcc
Confidence 9999999854 355555543
No 198
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.28 E-value=0.0016 Score=69.14 Aligned_cols=95 Identities=19% Similarity=0.071 Sum_probs=73.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++|+.+..-..
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------- 185 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK------------------------------------------- 185 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc-------------------------------------------
Confidence 59999976 5999999999999999999986521000
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
. ++ ..+.+.+.+.+++.|++++.+++++++...++++.|.++++ ++.||.||-|.|...
T Consensus 186 ~----------~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 186 Y----------FD-KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp T----------CC-HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBC
T ss_pred c----------CC-HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCC
Confidence 0 00 12345566677788999999999999987777887887666 899999999999764
No 199
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.27 E-value=0.00064 Score=79.44 Aligned_cols=36 Identities=31% Similarity=0.444 Sum_probs=31.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
+||||||||| +|+++|..|+++|++|+|||+.+.++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5899999965 68889999999999999999986543
No 200
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.27 E-value=0.0026 Score=67.41 Aligned_cols=97 Identities=16% Similarity=0.247 Sum_probs=72.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-.. .
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~------------------------- 188 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK-----------------Y------------------------- 188 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-----------------T-------------------------
T ss_pred eEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-----------------h-------------------------
Confidence 59999976 5999999999999999999986421100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
++ ..+.+.+.+.+++.|++++.+++++++..+++.+.....+|+++.+|.||.|.|....
T Consensus 189 -----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 189 -----------FD-KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred -----------hh-hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 00 1233455667778899999999999998766666522337889999999999997654
No 201
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.26 E-value=0.0018 Score=68.96 Aligned_cols=95 Identities=22% Similarity=0.233 Sum_probs=73.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+..- . +
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------------------~-----------~----------- 214 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF---------------------R-----------E----------- 214 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT---------------------T-----------S-----------
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC---------------------C-----------C-----------
Confidence 58999976 59999999999999999999764200 0 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
+ ..+.+.+.+.+++.|++++.+++|+++..+++.+.|.++ +.++.++.||-|.|..+..
T Consensus 215 ------------~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 215 ------------D-PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp ------------C-HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred ------------C-HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 0 123345666677789999999999999887777777775 5689999999999987653
No 202
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.25 E-value=0.00073 Score=72.04 Aligned_cols=97 Identities=15% Similarity=0.192 Sum_probs=72.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.++|+.+.....
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 215 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------------------------------ 215 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 358999976 5999999999999999999987521100
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc---CC--cEEEcCEEEEccCCChH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EG--KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---dG--~~i~ArlVI~ADG~~S~ 262 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..+++++.|+++ +| +++.+|.||.|.|....
T Consensus 216 ------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 216 ------------MD-AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp ------------SC-HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred ------------cc-HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 00 123344566677789999999999999876666777764 44 58999999999998764
No 203
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.24 E-value=0.0021 Score=68.83 Aligned_cols=95 Identities=20% Similarity=0.267 Sum_probs=70.5
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-+|+||||| .|+-+|..|++.|.+|.++|+.+.... . +
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~--------------------~--- 225 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT------------------I--------------------Y--- 225 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS------------------S--------------------S---
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh------------------c--------------------C---
Confidence 579999987 599999999999999999998642110 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE-EEEEcCCcEEEcCEEEEccCCChH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
+ ..+.+.+.+.+++.|++++.+++++++..+ +.+ .+.+ ++.++.+|.||.|.|..+.
T Consensus 226 -------------~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 226 -------------D-GDMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVET-DKGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp -------------C-HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEE-TTEEEECSEEEECSCEEES
T ss_pred -------------C-HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEE-CCCEEEcCEEEECcCCCcC
Confidence 0 123445666777889999999999999764 444 3555 4558999999999997653
No 204
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.24 E-value=0.0022 Score=68.35 Aligned_cols=96 Identities=23% Similarity=0.321 Sum_probs=72.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.|+|+.+..- . .
T Consensus 173 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------------------~----------~------------ 209 (464)
T 2a8x_A 173 SIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL---------------------P----------N------------ 209 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------------------T----------T------------
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc---------------------c----------c------------
Confidence 59999976 59999999999999999999865210 0 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc-CC--cEEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-EG--KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~-dG--~~i~ArlVI~ADG~~S~ 262 (549)
++ ..+.+.+.+.+++.|++++.+++++++..+++++.+.++ +| +++.+|.||-|.|....
T Consensus 210 -----------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 210 -----------ED-ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp -----------SC-HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred -----------cC-HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 00 112344556666779999999999999877667777775 56 58999999999997654
No 205
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.23 E-value=0.0023 Score=63.83 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=67.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 147 ~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------~- 183 (320)
T 1trb_A 147 KVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA------------------------------------------E- 183 (320)
T ss_dssp EEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC------------------------------------------C-
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc------------------------------------------C-
Confidence 69999976 599999999999999999997642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEcC----C--cEEEcCEEEEccCCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAE----G--KILSSHLIIDAMGNF 260 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~d----G--~~i~ArlVI~ADG~~ 260 (549)
..+.+.+.+.+.+.|++++.+++++++..+++.+. |.+.+ | .++.+|.||-|.|..
T Consensus 184 --------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 184 --------------KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp --------------HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred --------------HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 11233455666778999999999999987664432 55543 4 479999999999854
No 206
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.19 E-value=0.0023 Score=68.99 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=73.8
Q ss_pred cEEEEcch-HHHHHHHHHHhC---CCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 008915 112 DVIVCGGT-LGIFIATALSFK---GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~---GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~ 187 (549)
.|+||||| .|+-+|..|++. |.+|.++|+.+..-. .
T Consensus 193 ~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------------------------------~--------- 232 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-------------------------------G--------- 232 (495)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-------------------------------T---------
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-------------------------------c---------
Confidence 59999976 599999999988 999999997642110 0
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC-EEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
++ ..+.+.+.+.+++.|++++.+++|+++..+++ .+.|.+++|+++.+|.||.|.|.....
T Consensus 233 --------------~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 233 --------------FD-ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp --------------SC-HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred --------------cC-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 00 11234556667778999999999999987654 377888888899999999999977543
No 207
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.17 E-value=0.0011 Score=70.73 Aligned_cols=94 Identities=21% Similarity=0.257 Sum_probs=69.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.|+|+.+..... +
T Consensus 173 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~------------------------ 210 (458)
T 1lvl_A 173 HLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------------------Y------------------------ 210 (458)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------S------------------------
T ss_pred eEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------c------------------------
Confidence 69999976 5999999999999999999987521100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC--cEEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG--~~i~ArlVI~ADG~~S~ 262 (549)
+ ..+.+.+.+.+.+.|++++.+++++++.. +.+.++.++| +++.++.||.|.|....
T Consensus 211 ------------~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~v~v~~~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 211 ------------D-SELTAPVAESLKKLGIALHLGHSVEGYEN--GCLLANDGKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp ------------C-HHHHHHHHHHHHHHTCEEETTCEEEEEET--TEEEEECSSSCCCEECCSCEEECCCEEEC
T ss_pred ------------C-HHHHHHHHHHHHHCCCEEEECCEEEEEEe--CCEEEEECCCceEEEECCEEEECcCCCcC
Confidence 0 11233455566677999999999999875 3465654356 58999999999997654
No 208
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.16 E-value=0.0026 Score=68.48 Aligned_cols=105 Identities=19% Similarity=0.175 Sum_probs=77.6
Q ss_pred cEEEEcch-HHHHHHHHHHh----CCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 008915 112 DVIVCGGT-LGIFIATALSF----KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr----~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f 186 (549)
.|+||||| .|+-+|..|++ .|.+|.++++.+.+- .
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~---------------------~------------------- 221 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM---------------------G------------------- 221 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT---------------------T-------------------
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc---------------------c-------------------
Confidence 59999977 59989988876 488899998653100 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH--HH
Q 008915 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VV 264 (549)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~--vr 264 (549)
. . ++ ..+.+.+.+.+++.|++++.+++|+++..+++.+.|.+++|+++.|++||-|.|.... +.
T Consensus 222 ---~------~----l~-~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~ 287 (493)
T 1m6i_A 222 ---K------I----LP-EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELA 287 (493)
T ss_dssp ---T------T----SC-HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTH
T ss_pred ---c------c----CC-HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHH
Confidence 0 0 00 1234556667788899999999999998877778888888999999999999997643 55
Q ss_pred HHhcCC
Q 008915 265 KQIRSG 270 (549)
Q Consensus 265 rql~~~ 270 (549)
+.+++.
T Consensus 288 ~~~gl~ 293 (493)
T 1m6i_A 288 KTGGLE 293 (493)
T ss_dssp HHHTCC
T ss_pred HHcCCc
Confidence 666543
No 209
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.13 E-value=0.0029 Score=68.03 Aligned_cols=95 Identities=21% Similarity=0.203 Sum_probs=72.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+.... .+
T Consensus 176 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~~------------------------ 213 (492)
T 3ic9_A 176 SVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN------------------LQ------------------------ 213 (492)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT------------------CC------------------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------------------cC------------------------
Confidence 59999976 599999999999999999998653110 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc--CC--cEEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA--EG--KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~--dG--~~i~ArlVI~ADG~~S~ 262 (549)
+ ..+.+.+.+.+++. ++++.+++++++..+++++.+++. +| +++.+|.||-|.|....
T Consensus 214 ------------d-~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 214 ------------D-EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp ------------C-HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred ------------C-HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 0 02334455555566 999999999999988888888875 67 58999999999998654
No 210
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.12 E-value=0.00039 Score=73.11 Aligned_cols=36 Identities=33% Similarity=0.501 Sum_probs=31.6
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
.++||+||||| .|+++|..|+++|++|+|+|+....
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 37999999976 5889999999999999999998654
No 211
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.12 E-value=0.00032 Score=73.57 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=31.0
Q ss_pred cccEEEEcchH-HHHHHHHHHhC-CCcEEEEccCCCC
Q 008915 110 TFDVIVCGGTL-GIFIATALSFK-GLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg~-G~~~Aa~LAr~-GlrVlLIEr~~~~ 144 (549)
++||+|||||+ |+++|..|+++ |++|+|+|++..+
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 69999999875 88899999998 9999999998644
No 212
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.11 E-value=0.00032 Score=76.53 Aligned_cols=35 Identities=34% Similarity=0.479 Sum_probs=31.3
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
.+||+|||||| +|+++|..|++.|++|+|||+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 36999999976 599999999999999999999864
No 213
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.08 E-value=0.00042 Score=74.12 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC---cEEEcCEEEEccCCC
Q 008915 207 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG---KILSSHLIIDAMGNF 260 (549)
Q Consensus 207 L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG---~~i~ArlVI~ADG~~ 260 (549)
|-+.|.+.+.+ ++|+.+++|++|..++++++|++.+| ++++||.||.|....
T Consensus 241 l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 241 IYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 44555555422 68999999999999999999988776 589999999998653
No 214
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.08 E-value=0.00042 Score=72.57 Aligned_cols=42 Identities=7% Similarity=-0.008 Sum_probs=35.9
Q ss_pred cCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 218 LGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 218 ~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
.+.+++.+++|++|..++++++|++.+|+ ++||.||-|.+..
T Consensus 216 l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 216 LEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp SSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHH
T ss_pred hcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHH
Confidence 35678999999999988888988887775 9999999999865
No 215
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.07 E-value=0.004 Score=68.05 Aligned_cols=96 Identities=13% Similarity=0.160 Sum_probs=76.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.++||||| +|+=.|..+++.|.+|+|+++..... .
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~----------------------~---------------------- 260 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR----------------------G---------------------- 260 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST----------------------T----------------------
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc----------------------c----------------------
Confidence 49999987 59999999999999999998643110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChHH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~v 263 (549)
.| ..+-+.+.+.+++.|++++.++.++.+...++.+.|.+.++.++.++.|+.|.|+.-.+
T Consensus 261 -----------~D-~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 261 -----------FD-QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -----------cc-hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 00 11234456667788999999999999999999999999888889999999999976544
No 216
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.07 E-value=0.00035 Score=72.40 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=30.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
+|||+||||| .|+++|..|+++|++|+|+|+...+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 3899999977 5889999999999999999998644
No 217
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.05 E-value=0.00046 Score=73.12 Aligned_cols=57 Identities=16% Similarity=0.127 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
.+-+.|.+.+++.|++++.+++|+++..++++++....+|++++||.||.|.|..+.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 566778888888899999999999999888887643457889999999999999874
No 218
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.04 E-value=0.00036 Score=75.18 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=31.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
+|||+||||| +|+++|..|+++|++|+||||.+..+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 44 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGAYGT 44 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSCSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5999999976 58888889999999999999987555
No 219
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.04 E-value=0.0031 Score=67.30 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=73.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++.+..- . .
T Consensus 182 ~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------------------~----------~------------ 218 (476)
T 3lad_A 182 KLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL---------------------P----------A------------ 218 (476)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------------------T----------T------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC---------------------c----------c------------
Confidence 59999976 59999999999999999999864210 0 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC---cEEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG---KILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG---~~i~ArlVI~ADG~~S~ 262 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..+++++.+.+.++ +++.+|.||.|.|....
T Consensus 219 -----------~~-~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 219 -----------VD-EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred -----------cC-HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 00 12344556667778999999999999998888888887754 57999999999997643
No 220
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.02 E-value=0.003 Score=67.87 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=70.5
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.++|+.+..-.. .
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~------------------------ 233 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG-----------------Y------------------------ 233 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------T------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh-----------------H------------------------
Confidence 359999977 5999999999999999999986521100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE-EEEEcCCcEEEcCEEEEccCCChH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~dG~~i~ArlVI~ADG~~S~ 262 (549)
++ ..+.+.+.+.+++.|++++.+++++++.. ++.+ .|.+ +|+++.+|.||.|.|....
T Consensus 234 ------------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 234 ------------YD-RDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp ------------SC-HHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred ------------HH-HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 00 12344566677788999999999999975 3433 3555 6788999999999997643
No 221
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.98 E-value=0.0005 Score=73.76 Aligned_cols=57 Identities=21% Similarity=0.270 Sum_probs=42.5
Q ss_pred cccEEEEcchH-HHHHHHHHHhCCCcEEEEccCCCCCCC-c-------------cc--cCCHHHHHHHHHcCCC
Q 008915 110 TFDVIVCGGTL-GIFIATALSFKGLRVAIVERNTLKGRE-Q-------------EW--NISRKELLELVESGIL 166 (549)
Q Consensus 110 ~yDVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~~~~~~~-r-------------~~--~IS~~~l~~L~~lGl~ 166 (549)
.+||+|||||+ |+++|+.|+++|++|+|+|++..++.. . .| .-.+...+.+.++|+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~ 86 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLR 86 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCG
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCc
Confidence 58999999875 889999999999999999998765421 0 01 1124566778888874
No 222
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.95 E-value=0.0024 Score=65.99 Aligned_cols=97 Identities=21% Similarity=0.315 Sum_probs=71.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+.. ++
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~----------------------- 182 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-------------------LD----------------------- 182 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-------------------CC-----------------------
T ss_pred cEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-------------------CC-----------------------
Confidence 58999976 599999999999999999998652110 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCChH--HHHHhc
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQIR 268 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S~--vrrql~ 268 (549)
..+.+.+.+.+++.|++++.+++++++. .++ |.+++|+ +.++.||.|.|.... +.+.++
T Consensus 183 --------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~~--v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~g 243 (367)
T 1xhc_A 183 --------------EELSNMIKDMLEETGVKFFLNSELLEAN--EEG--VLTNSGF-IEGKVKICAIGIVPNVDLARRSG 243 (367)
T ss_dssp --------------HHHHHHHHHHHHHTTEEEECSCCEEEEC--SSE--EEETTEE-EECSCEEEECCEEECCHHHHHTT
T ss_pred --------------HHHHHHHHHHHHHCCCEEEcCCEEEEEE--eeE--EEECCCE-EEcCEEEECcCCCcCHHHHHhCC
Confidence 1233445666777899999999999986 343 5566787 999999999996643 455554
Q ss_pred C
Q 008915 269 S 269 (549)
Q Consensus 269 ~ 269 (549)
.
T Consensus 244 l 244 (367)
T 1xhc_A 244 I 244 (367)
T ss_dssp C
T ss_pred C
Confidence 3
No 223
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.93 E-value=0.00052 Score=74.22 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=35.7
Q ss_pred CEEEeCceEEEEEEE-CCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 220 GVIFEGYSVSSICTY-ENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 220 ~~v~~~t~v~~i~~~-~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
++|+.+++|++|..+ ++++.|++.+|++++||.||.|.+..
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~ 256 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQS 256 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHH
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHH
Confidence 479999999999986 66799999889899999999998743
No 224
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.93 E-value=0.0037 Score=66.57 Aligned_cols=96 Identities=13% Similarity=0.213 Sum_probs=73.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+|+||| .|+-+|..|++.|.+|.++++.+..- . .
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l---------------------~----------~----------- 208 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL---------------------S----------R----------- 208 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------------------T----------T-----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc---------------------c----------c-----------
Confidence 358999976 59999999999999999999865210 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE-EEEE-EcCCcEEEcCEEEEccCCChH
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLL-LAEGKILSSHLIIDAMGNFSP 262 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~-~~dG~~i~ArlVI~ADG~~S~ 262 (549)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|. +++|+ +.+|.||-|.|....
T Consensus 209 ------------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 209 ------------FD-QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred ------------cC-HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 00 123455666777889999999999999887666 5777 77887 999999999998654
No 225
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.91 E-value=0.0047 Score=62.84 Aligned_cols=102 Identities=19% Similarity=0.139 Sum_probs=70.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|.-+|..|++.|.+|.++++.+..... .+.+
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~------------------------------~~d~--------- 208 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP------------------------------DADP--------- 208 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC----------------------------------------C---------
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC------------------------------CCCC---------
Confidence 69999976 5988999999999999999986421100 0000
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcC-CEEEeCceEEEEEEECCEEEEEEcCCcEEE-cCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLG-GVIFEGYSVSSICTYENAAVLLLAEGKILS-SHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G-~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~-ArlVI~ADG~~S 261 (549)
.+. .+ ..+.+.+.+.+++.| ++++.+++++++..+++.+.|.+.+|+++. ++.||-|.|...
T Consensus 209 ~~~--------~~-~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 209 SVR--------LS-PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp TTS--------CC-HHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCG
T ss_pred Ccc--------CC-HHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCC
Confidence 000 01 123455566667776 999999999999877788888888887664 588888998654
No 226
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.91 E-value=0.0052 Score=65.74 Aligned_cols=94 Identities=14% Similarity=0.134 Sum_probs=69.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++...... +
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~------------------------ 225 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG-------------------F------------------------ 225 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT-------------------S------------------------
T ss_pred cEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc-------------------c------------------------
Confidence 58999976 599999999999999999987421000 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC-EEEEEEcCCc-----EEEcCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGK-----ILSSHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~dG~-----~i~ArlVI~ADG~~S 261 (549)
+ ..+.+.+.+.+++.|++++.+++++++..+++ .+.|++.++. ++.+|.||.|.|...
T Consensus 226 ------------d-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 226 ------------D-QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp ------------C-HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred ------------C-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 0 12334456667778999999999999987655 3667765543 799999999999754
No 227
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.90 E-value=0.00074 Score=70.42 Aligned_cols=35 Identities=23% Similarity=0.399 Sum_probs=30.8
Q ss_pred cccEEEEcchH-HHHHHHHHHhCCCcEEEEccC-CCC
Q 008915 110 TFDVIVCGGTL-GIFIATALSFKGLRVAIVERN-TLK 144 (549)
Q Consensus 110 ~yDVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~-~~~ 144 (549)
.+||+|||||+ |+++|..|+++|++|+|+|+. ...
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 58999999775 889999999999999999998 543
No 228
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.88 E-value=0.00084 Score=70.20 Aligned_cols=33 Identities=27% Similarity=0.146 Sum_probs=29.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
+||+||||| +|+.+|..||++|++|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 799999976 599999999999999999998874
No 229
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.87 E-value=0.00068 Score=75.42 Aligned_cols=36 Identities=25% Similarity=0.486 Sum_probs=32.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
+||||||||| +|+++|..|+++|++|+||||....+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 6999999975 59999999999999999999987654
No 230
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.87 E-value=0.00046 Score=75.33 Aligned_cols=35 Identities=34% Similarity=0.626 Sum_probs=31.0
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
.+||+|||||| +|+.+|..|++ |.+|+|||++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 36999999976 69999999999 9999999999754
No 231
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.86 E-value=0.00066 Score=74.80 Aligned_cols=35 Identities=31% Similarity=0.424 Sum_probs=31.2
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCC-CcEEEEccCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKG-LRVAIVERNTL 143 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~G-lrVlLIEr~~~ 143 (549)
.+||+|||||| +|+++|..|++.| ++|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 36999999965 6999999999997 89999999876
No 232
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.85 E-value=0.0036 Score=62.69 Aligned_cols=89 Identities=18% Similarity=0.034 Sum_probs=64.5
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+||||| .|+-+|..|++.|.+|.++++.+....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 359999976 599999999999999999997642110
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEECCEEE-EEEcC-----CcEEEcCEEEEccCCC
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAV-LLLAE-----GKILSSHLIIDAMGNF 260 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv~-V~~~d-----G~~i~ArlVI~ADG~~ 260 (549)
.+.+.+++.+. |++++.+++++++..+++++. |.+.+ +.++.+|+||-|.|..
T Consensus 211 ------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 ------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp ------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred ------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 01123344444 889999999999987766443 55543 3579999999999854
No 233
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.85 E-value=0.0012 Score=69.87 Aligned_cols=102 Identities=20% Similarity=0.188 Sum_probs=62.0
Q ss_pred cEEEEcch-HHHHHHHHHHhCC--CcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 008915 112 DVIVCGGT-LGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~G--lrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~ 188 (549)
.||||||| +|+++|..|++.+ ++|+|||+.+.... .+. +.. ...|..+. .
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~------~p~-l~~-v~~g~~~~-------------~------ 56 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF------TPA-FPH-LAMGWRKF-------------E------ 56 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC------GGG-HHH-HHHTCSCG-------------G------
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCcc------Ccc-HHH-HhcCCCCH-------------H------
Confidence 49999976 5888888998765 89999998764211 000 000 01122111 0
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
.+..+ + .+.+.+.|++++.+ +|++++.+.. +|++++|+++..|.||-|.|..
T Consensus 57 --~i~~~------~---------~~~~~~~gv~~i~~-~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 57 --DISVP------L---------APLLPKFNIEFINE-KAESIDPDAN--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp --GSEEE------S---------TTTGGGGTEEEECS-CEEEEETTTT--EEEETTCCEEECSEEEECCCCE
T ss_pred --Hhhhc------H---------HHHHHHCCcEEEEe-EEEEEECCCC--EEEECCCCEEECCEEEEeCCCC
Confidence 01100 0 00122357787755 6888765443 5678889999999999999974
No 234
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.79 E-value=0.013 Score=61.93 Aligned_cols=131 Identities=11% Similarity=0.052 Sum_probs=76.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCcEEEEccCCCCCC--Cccc---cCCHHHHHHHHHcCCCCcccchhhhhhccCCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGR--EQEW---NISRKELLELVESGILVEDDIDEATATKFNPN 182 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~--GlrVlLIEr~~~~~~--~r~~---~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~ 182 (549)
-.|+||||| .|+=+|..|++. |.+|.+++|...... ...+ ..++.....+..+. . +....+.....
T Consensus 228 ~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~---~-~~~~~~~~~~~-- 301 (463)
T 3s5w_A 228 MKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSRE---H-AERERLLREYH-- 301 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSC---H-HHHHHHHHHTG--
T ss_pred CeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCC---H-HHHHHHHHHhh--
Confidence 479999987 588899999988 999999999874321 1100 11222222222221 0 00000000000
Q ss_pred cccccCCccccccccccceeCHH----HHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEEEEEEc---CCc--EEEcCE
Q 008915 183 RCGFEGKGEIWVEDILNLGVSPA----KLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHL 252 (549)
Q Consensus 183 ~i~f~~~~~l~~~~~l~~~V~~~----~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv~V~~~---dG~--~i~Arl 252 (549)
...+ -+++.. ....+..+++.. .|++++.+++|+++..+++++.|++. +|+ ++.+|+
T Consensus 302 -------~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~ 368 (463)
T 3s5w_A 302 -------NTNY------SVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDA 368 (463)
T ss_dssp -------GGTS------SCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESE
T ss_pred -------ccCC------CcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCE
Confidence 0000 012222 222333334433 48899999999999998888888886 565 599999
Q ss_pred EEEccCCC
Q 008915 253 IIDAMGNF 260 (549)
Q Consensus 253 VI~ADG~~ 260 (549)
||-|.|..
T Consensus 369 Vv~AtG~~ 376 (463)
T 3s5w_A 369 VILATGYE 376 (463)
T ss_dssp EEECCCEE
T ss_pred EEEeeCCC
Confidence 99999954
No 235
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.79 E-value=0.00075 Score=74.41 Aligned_cols=34 Identities=29% Similarity=0.508 Sum_probs=30.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhC-CCcEEEEccCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFK-GLRVAIVERNT 142 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~-GlrVlLIEr~~ 142 (549)
.+||+|||||| +|+++|..|++. |++|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 47999999975 699999999975 89999999987
No 236
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.74 E-value=0.013 Score=58.10 Aligned_cols=89 Identities=18% Similarity=0.067 Sum_probs=63.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+|+||| .|+-+|..|++.|.+|.++++.+... .+
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------~~------------------------------------ 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR------CA------------------------------------ 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC------SC------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC------CC------------------------------------
Confidence 369999976 59999999999999999998764211 00
Q ss_pred ccccccccccceeCHHHHHHHHHHHHH-hcCCEEEeCceEEEEEEECCEE-EEEEc---CCc--EEEcCEEEEccCCC
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFI-SLGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~-~~G~~v~~~t~v~~i~~~~dgv-~V~~~---dG~--~i~ArlVI~ADG~~ 260 (549)
+ .+.+++. +.|++++.+++++++..+++++ .|.+. +|+ ++.+|.||-|.|..
T Consensus 182 --------------~-----~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 182 --------------P-----ITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp --------------H-----HHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred --------------H-----HHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 0 0122333 3588999999999998775654 34544 565 79999999999843
No 237
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.72 E-value=0.004 Score=64.61 Aligned_cols=42 Identities=17% Similarity=0.034 Sum_probs=31.7
Q ss_pred hcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 217 SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 217 ~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
..|++++.+ +|++++.+. -+|.+.+|.++..|.||.|.|...
T Consensus 67 ~~gv~~i~~-~v~~id~~~--~~v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 67 AHGIQVVHD-SALGIDPDK--KLVKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp HTTCEEECS-CEEEEETTT--TEEEETTSCEEECSEEEECCCEEE
T ss_pred HCCCEEEEe-EEEEEEccC--cEEEecccceeecceeeeccCCcc
Confidence 468888654 677775443 356677889999999999999753
No 238
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.70 E-value=0.00086 Score=71.30 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=30.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
+|||+||||| +|+++|..|++.|++|+||||...
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 38 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKEL 38 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCC
Confidence 6999999976 588889999999999999999854
No 239
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.69 E-value=0.012 Score=62.91 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=71.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++.+..-. .
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------~---------------------- 225 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR---------------------S---------------------- 225 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------T----------------------
T ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc---------------------c----------------------
Confidence 58999976 599999999999999999998642110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCE--EEEEEcC---C----cEEEcCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAE---G----KILSSHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg--v~V~~~d---G----~~i~ArlVI~ADG~~S 261 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..++++ +.|.+.+ | .++.+|.||-|.|...
T Consensus 226 -----------~d-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 226 -----------FD-SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred -----------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 00 112344556667789999999999999877666 5666654 2 5799999999999754
Q ss_pred H
Q 008915 262 P 262 (549)
Q Consensus 262 ~ 262 (549)
.
T Consensus 294 ~ 294 (478)
T 3dk9_A 294 N 294 (478)
T ss_dssp S
T ss_pred C
Confidence 3
No 240
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.69 E-value=0.0069 Score=66.47 Aligned_cols=101 Identities=17% Similarity=0.246 Sum_probs=74.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+.... .
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------~- 225 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP------------------------------------------P- 225 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------------------------------T-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc------------------------------------------c-
Confidence 59999976 599999999999999999997642110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh--HHHHHhc
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS--PVVKQIR 268 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S--~vrrql~ 268 (549)
.+ ..+.+.+.+.+++.|++++.+++++++..++++ |.+++|+++.+|.||-|.|... .+.+.++
T Consensus 226 -----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g 291 (588)
T 3ics_A 226 -----------ID-YEMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGVQPESSLAKGAG 291 (588)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCEEECCHHHHHTT
T ss_pred -----------CC-HHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCCCCChHHHHhcC
Confidence 00 123345566677789999999999999765454 5667888999999999999754 3455554
Q ss_pred C
Q 008915 269 S 269 (549)
Q Consensus 269 ~ 269 (549)
+
T Consensus 292 ~ 292 (588)
T 3ics_A 292 L 292 (588)
T ss_dssp C
T ss_pred c
Confidence 4
No 241
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.67 E-value=0.0011 Score=70.99 Aligned_cols=40 Identities=8% Similarity=0.033 Sum_probs=34.7
Q ss_pred EEEeCceEEEEEEECCEEEEEEcCCc----EEEcCEEEEccCCC
Q 008915 221 VIFEGYSVSSICTYENAAVLLLAEGK----ILSSHLIIDAMGNF 260 (549)
Q Consensus 221 ~v~~~t~v~~i~~~~dgv~V~~~dG~----~i~ArlVI~ADG~~ 260 (549)
+|+.+++|++|..+++++.|++.+|+ +++||.||.|.+..
T Consensus 254 ~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 254 KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 79999999999998889999887654 58999999999853
No 242
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.67 E-value=0.0054 Score=62.52 Aligned_cols=93 Identities=18% Similarity=0.160 Sum_probs=66.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++.+.... ..
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------~~ 202 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG------------------------------------------HG 202 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS------------------------------------------CS
T ss_pred cEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC------------------------------------------CH
Confidence 59999976 588899999999999999998652110 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE-EEEE--cCC--cEEEcCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLL--AEG--KILSSHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~--~dG--~~i~ArlVI~ADG~~S 261 (549)
.+.+.|.+..++.|++++.+++++++..+++.+ .|.+ .+| .++.+|.||-|.|...
T Consensus 203 ---------------~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 203 ---------------KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp ---------------HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred ---------------HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 001122334456789999999999998876643 3444 366 5799999999999553
No 243
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.64 E-value=0.0014 Score=68.30 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=30.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
++||+||||| .|+++|..|+++|++|+|+|+....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 4899999977 5999999999999999999998654
No 244
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.60 E-value=0.0065 Score=64.33 Aligned_cols=108 Identities=14% Similarity=0.090 Sum_probs=65.8
Q ss_pred EEEEcch-HHHHHHHHHHhCC--CcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 113 VIVCGGT-LGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 113 VIIVGGg-~G~~~Aa~LAr~G--lrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
||||||| +|+++|..|++.| .+|+||||.+.....++ .|+ .+. -+... .
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~l~-----~~~-~~~~~---------------------~ 54 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC-ALP-----YVI-GEVVE---------------------D 54 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG-GHH-----HHH-TTSSC---------------------C
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc-hhH-----HHH-cCCcc---------------------c
Confidence 8999975 6888999999888 57999999764332211 010 000 00000 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcC---CcEEEcCEEEEccCCCh
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---GKILSSHLIIDAMGNFS 261 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~d---G~~i~ArlVI~ADG~~S 261 (549)
.. . .....+..+ ..+.+++++.+++|+.++.+...+.+.... +.++++|.||-|+|...
T Consensus 55 ~~----~--~~~~~~~~~-------~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 55 RR----Y--ALAYTPEKF-------YDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp GG----G--TBCCCHHHH-------HHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred hh----h--hhhcCHHHH-------HHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcc
Confidence 00 0 011122221 234588999999999998777666665432 33789999999999753
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.59 E-value=0.012 Score=62.16 Aligned_cols=103 Identities=19% Similarity=0.226 Sum_probs=73.0
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-.. .
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~------------------------- 187 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR-----------------S------------------------- 187 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------T-------------------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-----------------h-------------------------
Confidence 79999977 5999999999999999999986521100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC--hHHHHHhc
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF--SPVVKQIR 268 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~--S~vrrql~ 268 (549)
++ ..+.+.+.+.+++. ++++.++.++++..++ .+.....+++++.+|.||-|.|.. ..+.+.++
T Consensus 188 -----------~~-~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~g 253 (449)
T 3kd9_A 188 -----------FD-KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKPNIELAKQLG 253 (449)
T ss_dssp -----------SC-HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEECCHHHHHTT
T ss_pred -----------cC-HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCC
Confidence 00 12344556666667 9999999999986544 443334477889999999999975 34556665
Q ss_pred CC
Q 008915 269 SG 270 (549)
Q Consensus 269 ~~ 270 (549)
..
T Consensus 254 l~ 255 (449)
T 3kd9_A 254 VR 255 (449)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 246
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.56 E-value=0.017 Score=57.80 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=66.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|.-+|..|++.|.+|.++++.+.... .
T Consensus 154 ~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~------------------------------------------~- 190 (335)
T 2zbw_A 154 RVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA------------------------------------------H- 190 (335)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS------------------------------------------C-
T ss_pred EEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc------------------------------------------c-
Confidence 69999976 588899999999999999998642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEc---CC--cEEEcCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EG--KILSSHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---dG--~~i~ArlVI~ADG~~S 261 (549)
..+.+.|.+.+++.|++++.+++++++..++....|.+. +| +++.+|.||-|.|...
T Consensus 191 --------------~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 191 --------------EASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp --------------HHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred --------------HHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 001123455566779999999999999874332245554 56 5799999999998553
No 247
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.55 E-value=0.00096 Score=73.32 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=31.0
Q ss_pred cccEEEEcch-HHHHHHHHHHh-CCCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSF-KGLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr-~GlrVlLIEr~~~~ 144 (549)
+||+|||||| +|+++|..|++ .|++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5999999976 69999999998 69999999998653
No 248
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.54 E-value=0.0021 Score=71.48 Aligned_cols=52 Identities=15% Similarity=0.111 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhcCCEEEeCceEEEEEEEC--CEEE-EEEcCCcEEEcCEEEEccC
Q 008915 207 LIEIVKKRFISLGGVIFEGYSVSSICTYE--NAAV-LLLAEGKILSSHLIIDAMG 258 (549)
Q Consensus 207 L~~~L~~~a~~~G~~v~~~t~v~~i~~~~--dgv~-V~~~dG~~i~ArlVI~ADG 258 (549)
|-+.|.+.++..|++++.+++|..|..++ +.++ |...+|++++|+.||....
T Consensus 380 L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 380 LPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred HHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 44566677788899999999999998887 4444 3446799999999997443
No 249
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.54 E-value=0.016 Score=62.11 Aligned_cols=95 Identities=19% Similarity=0.253 Sum_probs=69.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++...... +
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~---------------------------------------~---- 223 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG---------------------------------------F---- 223 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT---------------------------------------S----
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc---------------------------------------C----
Confidence 59999976 599999999999999999987531100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC-EEEEEEcC---Cc--EEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAE---GK--ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~d---G~--~i~ArlVI~ADG~~S~ 262 (549)
+ ..+.+.+.+.+++.|++++.++.++++...++ .+.|.+.+ |+ ++.+|.||-|.|....
T Consensus 224 ------------d-~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 224 ------------D-QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp ------------C-HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred ------------C-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 0 11334456667778999999999999987544 46666643 54 5899999999997543
No 250
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.51 E-value=0.002 Score=69.23 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=30.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCC-CcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKG-LRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~G-lrVlLIEr~~~~ 144 (549)
.+||+||||| .|+++|..|+++| .+|+|+|+.+.+
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 6899999977 5999999999998 799999998654
No 251
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.40 E-value=0.023 Score=56.04 Aligned_cols=89 Identities=18% Similarity=0.124 Sum_probs=63.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 149 ~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------~- 185 (315)
T 3r9u_A 149 EVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA------------------------------------------A- 185 (315)
T ss_dssp EEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS------------------------------------------C-
T ss_pred EEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC------------------------------------------C-
Confidence 59999976 599999999999999999987642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEE-EEEc--CCc--EEEcCEEEEccCCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA--EGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~--dG~--~i~ArlVI~ADG~~ 260 (549)
+.. +.+.+++.|++++.+++++++..+++.+. |.+. +|+ ++.+|.||-|.|..
T Consensus 186 -------------~~~----~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 186 -------------PST----VEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp -------------HHH----HHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred -------------HHH----HHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 011 11122456889999999999988775432 4443 675 79999999999843
No 252
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.38 E-value=0.0024 Score=68.09 Aligned_cols=55 Identities=5% Similarity=0.038 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhc--------CCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 206 KLIEIVKKRFISL--------GGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 206 ~L~~~L~~~a~~~--------G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
.+.+.|.+++.+. |++|+.+++|++|..++++++|++.+|++++||.||.|.+..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHH
Confidence 3445555555443 678999999999999999999999889899999999999853
No 253
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.35 E-value=0.022 Score=56.80 Aligned_cols=88 Identities=15% Similarity=0.089 Sum_probs=62.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 157 ~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------~- 193 (319)
T 3cty_A 157 RVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------E- 193 (319)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS------------------------------------------C-
T ss_pred eEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC------------------------------------------C-
Confidence 59999976 588899999999999999997542100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEE-EEEEc---CCc--EEEcCEEEEccCCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~---dG~--~i~ArlVI~ADG~~ 260 (549)
..+.+++.+.|++++.+++++++..+++.+ .|.+. +|+ ++.+|.||-|.|..
T Consensus 194 ------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 194 ------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred ------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 012233446789999999999998765412 34443 564 69999999998854
No 254
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.28 E-value=0.0025 Score=68.80 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=30.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
+||+|||||| .|+++|..|++.|++|+|||+..
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 6999999976 58899999999999999999886
No 255
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.28 E-value=0.0029 Score=68.43 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=30.6
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.+||+|||||| .|+++|..|++.|++|+|||+..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 37999999976 58899999999999999999875
No 256
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.27 E-value=0.02 Score=56.61 Aligned_cols=87 Identities=17% Similarity=0.100 Sum_probs=61.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++++.+... . .
T Consensus 146 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------------------~----------------------~- 182 (310)
T 1fl2_A 146 RVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--------------------A----------------------D- 182 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--------------------S----------------------C-
T ss_pred EEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--------------------c----------------------c-
Confidence 59999976 59989999999999999999764210 0 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEE-EEEEc---CCc--EEEcCEEEEccCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGN 259 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv-~V~~~---dG~--~i~ArlVI~ADG~ 259 (549)
+.+.+++.+ .|++++.+++++++..+++.+ .|.+. +|+ ++.++.||-|.|.
T Consensus 183 ------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 ------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp ------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred ------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 012233444 588999999999998655543 34443 353 6899999998884
No 257
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.23 E-value=0.0029 Score=69.15 Aligned_cols=36 Identities=39% Similarity=0.498 Sum_probs=31.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhC-CCcEEEEccCCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFK-GLRVAIVERNTLK 144 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~-GlrVlLIEr~~~~ 144 (549)
.+||+|||||| .|+++|..|++. |++|+|||+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 36999999976 599999999998 9999999998643
No 258
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.22 E-value=0.0036 Score=66.84 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=31.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
.+||+||||| +|+++|..|+++|++|+|+|+.+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 5899999965 6899999999999999999998654
No 259
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.21 E-value=0.01 Score=62.71 Aligned_cols=91 Identities=15% Similarity=0.273 Sum_probs=66.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..+++.|.+|.|+|+...... .. ..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~------------------~~----------------------d~ 188 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK------------------LM----------------------DA 188 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST------------------TS----------------------CG
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccccc------------------cc----------------------cc
Confidence 59999976 599999999999999999998652110 00 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
. +.+.+.+.+.+.|++++.++++++++ .+ .|.+++|+++.+|+||.|.|...
T Consensus 189 ~---------------~~~~~~~~l~~~gV~i~~~~~v~~~~--~~--~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 189 D---------------MNQPILDELDKREIPYRLNEEINAIN--GN--EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp G---------------GGHHHHHHHHHTTCCEEESCCEEEEE--TT--EEEETTSCEEECSEEEECCCEEE
T ss_pred h---------------hHHHHHHHhhccceEEEeccEEEEec--CC--eeeecCCeEEeeeeEEEEeceec
Confidence 0 11234455667899999999998864 33 35677899999999999999653
No 260
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.20 E-value=0.029 Score=59.60 Aligned_cols=94 Identities=14% Similarity=0.209 Sum_probs=68.0
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++.+..-.. +
T Consensus 174 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------------~---- 211 (466)
T 3l8k_A 174 DMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT--------------------------------------L---- 211 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------------------------S----
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC--------------------------------------C----
Confidence 59999976 5999999999999999999986521100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEEC-CEEEEEEc--CCc--EEEcCEEEEccCCChH
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLLA--EGK--ILSSHLIIDAMGNFSP 262 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dgv~V~~~--dG~--~i~ArlVI~ADG~~S~ 262 (549)
++ ..+.+.+.+.+. ++++.+++++++..++ +++.|.++ +|+ ++.+|.||-|.|....
T Consensus 212 -----------~d-~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~ 273 (466)
T 3l8k_A 212 -----------ED-QDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPV 273 (466)
T ss_dssp -----------CC-HHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEEC
T ss_pred -----------CC-HHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcc
Confidence 00 011222333332 8899999999998877 78888887 565 8999999999997644
No 261
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.15 E-value=0.0041 Score=69.60 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=32.1
Q ss_pred CCcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 108 VGTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 108 ~~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
...+||+||||| +|+.+|..|+++|++|+|||+.+..+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIG 409 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 346899999976 58888999999999999999986543
No 262
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.14 E-value=0.0035 Score=69.14 Aligned_cols=36 Identities=28% Similarity=0.564 Sum_probs=31.5
Q ss_pred CcccEEEEcch-HHHHHHHHHHh-CCCcEEEEccCCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSF-KGLRVAIVERNTLK 144 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr-~GlrVlLIEr~~~~ 144 (549)
.+||+|||||| .|+++|..|++ .|++|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999976 59999999999 79999999998653
No 263
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.13 E-value=0.0043 Score=70.16 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=31.9
Q ss_pred CCcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 108 VGTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 108 ~~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
...+||+||||| +|+++|..|+++|++|+|||+....
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 346899999975 6889999999999999999998654
No 264
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.12 E-value=0.04 Score=55.01 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=61.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++++.+.... +
T Consensus 154 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------~------------------------------------- 190 (325)
T 2q7v_A 154 KVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA------N------------------------------------- 190 (325)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS------C-------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc------c-------------------------------------
Confidence 59999976 599899999999999999997642110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEEEEEEc---CCc--EEEcCEEEEccCCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHLIIDAMGNF 260 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv~V~~~---dG~--~i~ArlVI~ADG~~ 260 (549)
..+.+++.+ .|++++.+++++++..++....|.+. +|+ ++.+|.||-|.|..
T Consensus 191 ------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 191 ------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp ------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 001223333 48899999999999764332234443 564 79999999998844
No 265
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.01 E-value=0.06 Score=58.14 Aligned_cols=94 Identities=14% Similarity=0.164 Sum_probs=66.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++..... .
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~----------------------~---------------------- 247 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR----------------------G---------------------- 247 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST----------------------T----------------------
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc----------------------c----------------------
Confidence 48999976 59999999999999999998742100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEEC----CEEEEEE--cCC-c--EEEcCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE----NAAVLLL--AEG-K--ILSSHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~----dgv~V~~--~dG-~--~i~ArlVI~ADG~~S 261 (549)
++ ..+.+.+.+.+++.|++++.+++++.+...+ +.+.+++ .+| + ++.+|.||-|.|...
T Consensus 248 -----------~d-~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 248 -----------FD-QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEE
T ss_pred -----------CC-HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcc
Confidence 00 1133445566777899999999988887543 3455544 344 2 578999999999764
No 266
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=95.96 E-value=0.037 Score=54.64 Aligned_cols=90 Identities=18% Similarity=0.090 Sum_probs=64.0
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+|+||| .|+-+|..|++.|.+|.++++.+....
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------- 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------------------------------------
Confidence 359999976 599999999999999999987642110
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEEEEEEcC---Cc--EEEcCEEEEccCCCh
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLAE---GK--ILSSHLIIDAMGNFS 261 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv~V~~~d---G~--~i~ArlVI~ADG~~S 261 (549)
++ .+.+++.+ .|++++.+++++++..++....|.+.+ |+ ++.+|+||-|.|...
T Consensus 192 -------------~~-----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 192 -------------QP-----IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp -------------CH-----HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred -------------CH-----HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 00 01123333 488999999999998765444466554 65 799999999998653
No 267
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.95 E-value=0.018 Score=57.36 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=62.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++++.+.... .+
T Consensus 156 ~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~------------------------~~------------------ 193 (332)
T 3lzw_A 156 RVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA------------------------HE------------------ 193 (332)
T ss_dssp EEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS------------------------CH------------------
T ss_pred EEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc------------------------cH------------------
Confidence 59999976 599999999999999999987642100 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcC-----CcEEEcCEEEEccCCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-----GKILSSHLIIDAMGNF 260 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~d-----G~~i~ArlVI~ADG~~ 260 (549)
. ..+++.+.|++++.+++++++..+++...|.+.+ +.++.+|+||-|.|..
T Consensus 194 --------------~-----~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 194 --------------H-----SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp --------------H-----HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred --------------H-----HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 0 0122456799999999999997765544455543 3479999999998843
No 268
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.93 E-value=0.0093 Score=64.42 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=29.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
+..||||||| +|+.+|..|++.+++|+|||+++.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 4579999977 588888899999999999998763
No 269
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.91 E-value=0.0061 Score=68.12 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=35.4
Q ss_pred CCEEEeCceEEEEEEECCEEEEEEcC------CcEEEcCEEEEccC
Q 008915 219 GGVIFEGYSVSSICTYENAAVLLLAE------GKILSSHLIIDAMG 258 (549)
Q Consensus 219 G~~v~~~t~v~~i~~~~dgv~V~~~d------G~~i~ArlVI~ADG 258 (549)
+.+|+.+++|++|..++++++|++.+ +++++||.||.|..
T Consensus 410 ~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 455 (662)
T ss_dssp TCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCC
T ss_pred cCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCC
Confidence 56899999999999999999998865 56899999999886
No 270
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.91 E-value=0.081 Score=58.02 Aligned_cols=95 Identities=18% Similarity=0.173 Sum_probs=65.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++....+. +
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~------------------------ 324 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRSILLRG-------------------F------------------------ 324 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------S------------------------
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcCc-------------------C------------------------
Confidence 59999977 599999999999999999997521000 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE------C---CEEEEE--EcCCcEEE--cCEEEEcc
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY------E---NAAVLL--LAEGKILS--SHLIIDAM 257 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~------~---dgv~V~--~~dG~~i~--ArlVI~AD 257 (549)
+ ..+.+.+.+.+++.|++++.++.++.+... + +.+.++ ..+|+++. ++.||-|.
T Consensus 325 ------------d-~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~ 391 (598)
T 2x8g_A 325 ------------D-QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAV 391 (598)
T ss_dssp ------------C-HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECS
T ss_pred ------------C-HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEe
Confidence 0 011233445566779999999988888643 2 445554 35676555 99999999
Q ss_pred CCChH
Q 008915 258 GNFSP 262 (549)
Q Consensus 258 G~~S~ 262 (549)
|....
T Consensus 392 G~~p~ 396 (598)
T 2x8g_A 392 GREPQ 396 (598)
T ss_dssp CEEEC
T ss_pred CCccc
Confidence 97654
No 271
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.85 E-value=0.012 Score=57.47 Aligned_cols=83 Identities=13% Similarity=0.078 Sum_probs=60.4
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+|+||| .|+-+|..|++.| +|.++++.+. .+
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~-------~~------------------------------------- 176 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV-------EP------------------------------------- 176 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC-------CC-------------------------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC-------CC-------------------------------------
Confidence 368999976 5999999999999 9999976532 00
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
+ +.+.+.+.+.|++++. ++++++.. ++ .|.+.+|+++.++.||-|.|..
T Consensus 177 -------------~-----~~~~~~l~~~gv~i~~-~~v~~i~~--~~-~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 177 -------------D-----ADQHALLAARGVRVET-TRIREIAG--HA-DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp -------------C-----HHHHHHHHHTTCEEEC-SCEEEEET--TE-EEEETTSCEEEESEEEECCEEE
T ss_pred -------------C-----HHHHHHHHHCCcEEEc-ceeeeeec--CC-eEEeCCCCEEEEEEEEEccCcc
Confidence 0 0123344567888885 88888753 33 6777788899999999999853
No 272
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.84 E-value=0.03 Score=55.99 Aligned_cols=88 Identities=20% Similarity=0.137 Sum_probs=62.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+|+||| .|+-+|..|++.|.+|.++++.+... . .
T Consensus 161 ~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~------~------------------------------------~- 197 (333)
T 1vdc_A 161 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR------A------------------------------------S- 197 (333)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC------S------------------------------------C-
T ss_pred eEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC------c------------------------------------c-
Confidence 69999976 59999999999999999999865211 0 0
Q ss_pred cccccccccceeCHHHHHHHHHHH-HHhcCCEEEeCceEEEEEEECC--EE-EEEEc---CC--cEEEcCEEEEccCCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKR-FISLGGVIFEGYSVSSICTYEN--AA-VLLLA---EG--KILSSHLIIDAMGNF 260 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~-a~~~G~~v~~~t~v~~i~~~~d--gv-~V~~~---dG--~~i~ArlVI~ADG~~ 260 (549)
+.+.++ +++.|++++.+++++++..+++ .+ .|.+. +| .++.+|.||-|.|..
T Consensus 198 ------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 198 ------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp ------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 001112 2356889999999999987654 33 24443 35 479999999999854
No 273
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.66 E-value=0.0093 Score=68.53 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=34.6
Q ss_pred CCEEEeCceEEEEEEECCEEEEEEcC------CcEEEcCEEEEccC
Q 008915 219 GGVIFEGYSVSSICTYENAAVLLLAE------GKILSSHLIIDAMG 258 (549)
Q Consensus 219 G~~v~~~t~v~~i~~~~dgv~V~~~d------G~~i~ArlVI~ADG 258 (549)
+..|+.+++|+.|..+++++.|++.+ +++++||.||.|.-
T Consensus 581 ~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvP 626 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 626 (852)
T ss_dssp TCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCC
T ss_pred CCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCC
Confidence 45799999999999999999998765 56899999998875
No 274
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.61 E-value=0.057 Score=58.77 Aligned_cols=32 Identities=22% Similarity=0.165 Sum_probs=28.9
Q ss_pred cEEEEcchH-HHHHHHHHHhCCCcEEEEccCCC
Q 008915 112 DVIVCGGTL-GIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 112 DVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
.|+|||||. |+-+|..|++.|.+|.+++|.+.
T Consensus 180 rV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 180 RVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred eEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 599999875 99999999999999999999875
No 275
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.21 E-value=0.055 Score=54.35 Aligned_cols=90 Identities=17% Similarity=0.078 Sum_probs=60.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~ 189 (549)
-.|+|+||| .|+-+|..|++.|.+|.++++.+... . .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~--------------------~----------------------~ 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR--------------------A----------------------S 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS--------------------S----------------------C
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC--------------------c----------------------c
Confidence 369999976 59999999999999999999764210 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECC--EEEEEE-cCC--cEEEcCEEEEccCCC
Q 008915 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN--AAVLLL-AEG--KILSSHLIIDAMGNF 260 (549)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d--gv~V~~-~dG--~~i~ArlVI~ADG~~ 260 (549)
. .+.+ +.+.+.|++++.+++++++..+++ ++.+.. .+| +++.+|.||-|.|..
T Consensus 194 ~---------------~~~~---~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 194 K---------------IMLD---RARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp T---------------THHH---HHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred H---------------HHHH---HHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 0 0000 112356889999999999875543 244442 134 478999999888843
No 276
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.18 E-value=0.058 Score=58.14 Aligned_cols=53 Identities=19% Similarity=0.157 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE--cCCc----EEEcCEEEEccCCC
Q 008915 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEGK----ILSSHLIIDAMGNF 260 (549)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~dG~----~i~ArlVI~ADG~~ 260 (549)
.+-+.+.+.+++.|++++.+++|++++ ++++.+.. .||+ ++.|++||-|.|..
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 455666777888899999999999874 56665544 4553 69999999999953
No 277
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.16 E-value=0.013 Score=62.46 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=30.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCC--CcEEEEccCCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKG--LRVAIVERNTLKG 145 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~G--lrVlLIEr~~~~~ 145 (549)
.+||+||||| +|+.+|..|+++| ++|+|||+.+.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 5899999976 5888999999988 9999999987543
No 278
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.15 E-value=0.012 Score=64.21 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=28.8
Q ss_pred cEEEEcchH-HHHHHHHHHhCCCcEEEEccCCC
Q 008915 112 DVIVCGGTL-GIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 112 DVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
.|+|||||. |.-+|..|++.|.+|.|++|.+.
T Consensus 187 rV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 187 RVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred eEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 599999775 99999999999999999999874
No 279
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.11 E-value=0.013 Score=61.06 Aligned_cols=83 Identities=22% Similarity=0.263 Sum_probs=60.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.|+|+.+.+-.. .
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~------------------------------~------------ 185 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER------------------------------Q------------ 185 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh------------------------------h------------
Confidence 59999976 5999999999999999999987531100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCCh
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~S 261 (549)
++ ..+.+.+.+.+++.|++++.+++++++ |+++.+|+||-|.|...
T Consensus 186 -----------~~-~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p 231 (385)
T 3klj_A 186 -----------LD-RDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKP 231 (385)
T ss_dssp -----------SC-HHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEE
T ss_pred -----------cC-HHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCccc
Confidence 00 122344555666778888888877665 55688999999999754
No 280
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.07 E-value=0.015 Score=68.24 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=30.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC-cEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGL-RVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Gl-rVlLIEr~~~~ 144 (549)
.+||+||||| +|+++|..|+++|+ +|+|+||....
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 5899999965 68899999999999 79999998643
No 281
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.05 E-value=0.14 Score=54.39 Aligned_cols=132 Identities=17% Similarity=0.115 Sum_probs=72.8
Q ss_pred ccEEEEcch-HHHHHHHHHH--------------------hCCC-cEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCc
Q 008915 111 FDVIVCGGT-LGIFIATALS--------------------FKGL-RVAIVERNTLKGREQEWNISRKELLELVESGILVE 168 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA--------------------r~Gl-rVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~ 168 (549)
-.|+||||| .|+=+|..|+ +.|. +|.|++|...... ..+..++..|..+.-.+.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~----~ft~~el~~l~~lp~~~~ 221 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQV----AFTIKELREMIQLPGTRP 221 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGC----CCCHHHHHHHHTCTTEEE
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhh----ccCHHHHHHhhcCCCcee
Confidence 369999977 5998999988 6788 6999998764321 355566655543321000
Q ss_pred ccchhhhhhccCCCcccccCCccccccccccceeCHHHHHHHHHHHHHh--------------cCCEEEeCceEEEEEEE
Q 008915 169 DDIDEATATKFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS--------------LGGVIFEGYSVSSICTY 234 (549)
Q Consensus 169 ~eie~~i~~~~~~~~i~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~--------------~G~~v~~~t~v~~i~~~ 234 (549)
.++. .++.. ....+ +. ++- ....+.+.|.+.+.+ .|++++.+++++++..+
T Consensus 222 -~~~~---~~~~~-------~~~~~-~~-~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~ 286 (460)
T 1cjc_A 222 -MLDP---ADFLG-------LQDRI-KE-AAR--PRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPS 286 (460)
T ss_dssp -ECCG---GGGTT-------HHHHT-TT-SCH--HHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEEC
T ss_pred -Eech---hhhcc-------hhhhh-hh-ccH--HHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcC
Confidence 0000 00000 00000 00 000 012244555555554 78899999999998765
Q ss_pred C-C-E---EEEEEc-------------CC--cEEEcCEEEEccCCCh
Q 008915 235 E-N-A---AVLLLA-------------EG--KILSSHLIIDAMGNFS 261 (549)
Q Consensus 235 ~-d-g---v~V~~~-------------dG--~~i~ArlVI~ADG~~S 261 (549)
+ + . +++... +| +++.|++||-|.|..+
T Consensus 287 ~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 287 PDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp TTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred CCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 3 3 2 333210 23 4788888888888554
No 282
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.76 E-value=0.018 Score=61.38 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=30.2
Q ss_pred cccEEEEcch-HHHHHHHHHHh-C------CCcEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSF-K------GLRVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr-~------GlrVlLIEr~~~~ 144 (549)
.+||+||||| +|+.+|..|++ + |++|+|||+.+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5899999975 58889999999 7 9999999998654
No 283
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.31 E-value=0.076 Score=57.88 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=28.7
Q ss_pred cEEEEcchH-HHHHHHHHHhCCCcEEEEccCCC
Q 008915 112 DVIVCGGTL-GIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 112 DVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
.|+|||||. |.-+|..|++.|.+|.+++|.+.
T Consensus 193 rV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 193 RVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred EEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 599999775 99999999999999999999874
No 284
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.28 E-value=0.17 Score=54.71 Aligned_cols=87 Identities=17% Similarity=0.098 Sum_probs=61.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 357 ~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------------------------------------~- 393 (521)
T 1hyu_A 357 RVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------D- 393 (521)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS------------------------------------------C-
T ss_pred eEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc------------------------------------------C-
Confidence 69999976 599899999999999999987642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEECCEE-EEEEc---CCc--EEEcCEEEEccCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGN 259 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv-~V~~~---dG~--~i~ArlVI~ADG~ 259 (549)
+.+.+++.+ .|++++.++.++++..+++.+ .|.+. +|+ ++.++.||-|.|.
T Consensus 394 ------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 ------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp ------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 112334444 478999999999997655544 34443 353 6889999988873
No 285
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=93.78 E-value=0.12 Score=54.97 Aligned_cols=131 Identities=21% Similarity=0.163 Sum_probs=70.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--------------------CC-cEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCc
Q 008915 111 FDVIVCGGT-LGIFIATALSFK--------------------GL-RVAIVERNTLKGREQEWNISRKELLELVESGILVE 168 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~--------------------Gl-rVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~ 168 (549)
-.|+||||| .|+=+|..|++. |. +|.||+|...... ..+..++..|..+. .
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~----~f~~~elrel~~lp---~ 220 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQA----AFTTLELRELADLD---G 220 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGC----CCCHHHHHHGGGCT---T
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhh----ccChHHHHHhhcCC---C
Confidence 369999976 599899988874 65 9999998764221 24444444332221 0
Q ss_pred ccchhhhhhccCCCcccccCCccccccccccceeC--HHHHHHHHHHHHHh------cCCEEEeCceEEEEEEECC--EE
Q 008915 169 DDIDEATATKFNPNRCGFEGKGEIWVEDILNLGVS--PAKLIEIVKKRFIS------LGGVIFEGYSVSSICTYEN--AA 238 (549)
Q Consensus 169 ~eie~~i~~~~~~~~i~f~~~~~l~~~~~l~~~V~--~~~L~~~L~~~a~~------~G~~v~~~t~v~~i~~~~d--gv 238 (549)
++ ++ +.+..+. ....... ...+ ...+.+.|.+.+.+ .|++++.+++++++..++. ++
T Consensus 221 --~~-~~---~~~~~~~-~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v 287 (456)
T 1lqt_A 221 --VD-VV---IDPAELD-GITDEDA------AAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERI 287 (456)
T ss_dssp --EE-EE---CCGGGGT-TCCHHHH------HHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEE
T ss_pred --ce-ee---eChHHhc-cchhhhh------hhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEE
Confidence 00 00 0000000 0000000 0001 12234556666655 6889999999999865422 24
Q ss_pred EEEE--------------cCC--cEEEcCEEEEccCCCh
Q 008915 239 VLLL--------------AEG--KILSSHLIIDAMGNFS 261 (549)
Q Consensus 239 ~V~~--------------~dG--~~i~ArlVI~ADG~~S 261 (549)
++.. .+| +++.|++||-|.|..+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 288 VLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp EEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred EEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 4331 123 3688888888888553
No 286
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.31 E-value=0.038 Score=62.08 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=29.6
Q ss_pred cccEEEEcchH-HHHHHHHHHhCC--------CcEEEEccCC
Q 008915 110 TFDVIVCGGTL-GIFIATALSFKG--------LRVAIVERNT 142 (549)
Q Consensus 110 ~yDVIIVGGg~-G~~~Aa~LAr~G--------lrVlLIEr~~ 142 (549)
..+|+|||||+ |+++|..|+++| ++|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 47999999875 888999999998 9999999986
No 287
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=93.30 E-value=0.42 Score=53.18 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCC--cEEEcCEEEEccCCCh
Q 008915 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFS 261 (549)
Q Consensus 209 ~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG--~~i~ArlVI~ADG~~S 261 (549)
..+.+.+++.|++++.+++++++. +++++++ .+| +++.+|.||-|.|...
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 445666777899999999999885 5676665 567 5799999999999764
No 288
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=92.67 E-value=0.46 Score=49.10 Aligned_cols=50 Identities=14% Similarity=0.196 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEEcCCcEEEcCEEEEccCCC
Q 008915 207 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (549)
Q Consensus 207 L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~dG~~i~ArlVI~ADG~~ 260 (549)
+.+.+.+.+++.|++++.++++++++ +++ |.+++|+++.+|+||-|.|..
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~--~~~--v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIR--EHE--IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEC--SSE--EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEEC--CCe--EEECCCCEEeeeEEEECCCCC
Confidence 34455666677899999999999885 344 566788899999999998854
No 289
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.26 E-value=0.15 Score=53.58 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=27.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCc-EEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLR-VAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~Glr-VlLIEr~~ 142 (549)
.|+||||| .|+=+|..|++.|.+ |.|++|..
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred EEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 59999987 588899999999999 99999864
No 290
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=92.24 E-value=0.47 Score=53.39 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=27.3
Q ss_pred cEEEEc--ch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCG--GT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVG--Gg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|+||| || .|+-+|..|++.|.+|.++++.+
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 699998 55 69999999999999999999865
No 291
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=91.98 E-value=0.32 Score=56.67 Aligned_cols=93 Identities=16% Similarity=0.168 Sum_probs=65.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~~eie~~i~~~~~~~~i~f~~~~ 190 (549)
.|+||||| .|+-+|..|++.|.+|.|+|+.+... .
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~--------~------------------------------------ 321 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDARSSIS--------A------------------------------------ 321 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC--------H------------------------------------
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc--------h------------------------------------
Confidence 58999976 59999999999999999999764210 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEE-CCEE-EEEEcC-------C--cEEEcCEEEEccCC
Q 008915 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAA-VLLLAE-------G--KILSSHLIIDAMGN 259 (549)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-~dgv-~V~~~d-------G--~~i~ArlVI~ADG~ 259 (549)
. .+++++.|++++.+++++++..+ ++++ .|++.+ | +++.+|.||-|.|.
T Consensus 322 --------------~------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 322 --------------A------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp --------------H------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred --------------h------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 0 13345678999999999998764 3432 344332 4 57999999999996
Q ss_pred Ch--HHHHHhc
Q 008915 260 FS--PVVKQIR 268 (549)
Q Consensus 260 ~S--~vrrql~ 268 (549)
.. .+.++.+
T Consensus 382 ~P~~~l~~~~~ 392 (965)
T 2gag_A 382 NPVVHLHSQRQ 392 (965)
T ss_dssp EECCHHHHHTT
T ss_pred CcChHHHHhCC
Confidence 43 3455543
No 292
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.96 E-value=0.17 Score=44.28 Aligned_cols=32 Identities=13% Similarity=0.311 Sum_probs=28.4
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-.|+|+|. ..|..+|..|.+.|++|.++|+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 45999995 579999999999999999999864
No 293
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=91.59 E-value=0.89 Score=53.23 Aligned_cols=31 Identities=35% Similarity=0.262 Sum_probs=27.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCC-cEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGL-RVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~Gl-rVlLIEr~~ 142 (549)
.|+||||| .|+=+|..+++.|. +|.+++|.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999987 59999999999997 899999864
No 294
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.29 E-value=0.18 Score=44.87 Aligned_cols=32 Identities=31% Similarity=0.472 Sum_probs=28.2
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-.|+|+|+ .+|..+|..|.+.|++|.++|+.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45999995 579999999999999999999865
No 295
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.01 E-value=0.48 Score=50.21 Aligned_cols=31 Identities=19% Similarity=0.119 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|+||||| .|+=+|..|++.|.+|.++++.+
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 59999977 59999999999999999999765
No 296
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.77 E-value=0.19 Score=43.66 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=27.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|+|+|+| .|..+|..|+++|++|.++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 59999954 79999999999999999999854
No 297
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.39 E-value=0.28 Score=51.54 Aligned_cols=36 Identities=33% Similarity=0.547 Sum_probs=31.8
Q ss_pred cccEEEEcchH-HHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 110 TFDVIVCGGTL-GIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 110 ~yDVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
+|||||||||+ |+++|+.|+++|++|+|+|++..++
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 69999999775 8889999999999999999987553
No 298
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=90.04 E-value=0.4 Score=51.28 Aligned_cols=37 Identities=30% Similarity=0.547 Sum_probs=32.7
Q ss_pred CcccEEEEcchH-HHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 109 GTFDVIVCGGTL-GIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 109 ~~yDVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
.+|||||||+|+ |+++|+.|+++|++|+|+||++..+
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 469999999875 8889999999999999999997654
No 299
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.97 E-value=0.25 Score=42.34 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=27.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
..|+|+|+| +|..+|..|++.|++|.++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999955 79999999999999999999753
No 300
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=89.94 E-value=0.32 Score=51.43 Aligned_cols=35 Identities=34% Similarity=0.338 Sum_probs=30.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC-cEEEEccCCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGL-RVAIVERNTLK 144 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~Gl-rVlLIEr~~~~ 144 (549)
.+||+||||| .|+++|..|+++|+ +|+|+|+...+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 6899999976 58899999999999 89999998654
No 301
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=89.49 E-value=1.6 Score=45.55 Aligned_cols=49 Identities=12% Similarity=0.101 Sum_probs=36.2
Q ss_pred HHHHHHHHhcCCEEEeCceEEEEEEECCEEEEEE--cC-----CcEEEcCEEEEccCC
Q 008915 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AE-----GKILSSHLIIDAMGN 259 (549)
Q Consensus 209 ~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~d-----G~~i~ArlVI~ADG~ 259 (549)
+.+.+.+++.|++++.++++++++ +++++++. .+ ++++.++++|-|.|.
T Consensus 212 ~~~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 212 GILTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEE--TTEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEE--CCeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 345566677899999999999874 56666654 23 457999999999873
No 302
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.98 E-value=0.27 Score=48.97 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=26.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-.|+||||| .|+-+|..|++.| +|.++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 369999976 5999999999999 799999874
No 303
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=88.74 E-value=0.6 Score=49.19 Aligned_cols=37 Identities=27% Similarity=0.467 Sum_probs=32.9
Q ss_pred CcccEEEEcchH-HHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 109 GTFDVIVCGGTL-GIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 109 ~~yDVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
.+|||||||||+ |+++|+.|+++|++|+|+||+..++
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 369999999875 8889999999999999999998765
No 304
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.40 E-value=0.32 Score=47.27 Aligned_cols=33 Identities=24% Similarity=0.478 Sum_probs=28.8
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-cEEEEccCCC
Q 008915 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LAr~Gl-rVlLIEr~~~ 143 (549)
-.|+|+| ||+|+.+|..|++.|. ++.|+|+...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4599999 7899999999999998 8999998653
No 305
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.38 E-value=0.33 Score=40.19 Aligned_cols=32 Identities=22% Similarity=0.489 Sum_probs=27.7
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCC-CcEEEEccCC
Q 008915 111 FDVIVCGG-TLGIFIATALSFKG-LRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LAr~G-lrVlLIEr~~ 142 (549)
-.|+|+|+ ++|..+|..|.+.| ++|.+++|.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 46999995 57999999999999 9999999864
No 306
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.98 E-value=0.4 Score=41.14 Aligned_cols=31 Identities=29% Similarity=0.250 Sum_probs=27.2
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|+|+|+ .+|..+|..|.+.|++|.++|+.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4999995 579999999999999999999753
No 307
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.86 E-value=0.51 Score=41.67 Aligned_cols=31 Identities=29% Similarity=0.503 Sum_probs=27.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|+|+|+| .|...|..|.+.|++|.++|+.+
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 48999965 79999999999999999999863
No 308
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.21 E-value=0.45 Score=44.78 Aligned_cols=31 Identities=23% Similarity=0.510 Sum_probs=27.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|+|+|+| .|..+|..|.++|++|.++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 38999976 69999999999999999999764
No 309
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.04 E-value=0.38 Score=43.86 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=27.4
Q ss_pred cEEEEcc-hHHHHHHHHHHhC-CCcEEEEccCC
Q 008915 112 DVIVCGG-TLGIFIATALSFK-GLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LAr~-GlrVlLIEr~~ 142 (549)
.|+|+|. .+|..+|..|.+. |++|.++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 5999994 5799999999999 99999999864
No 310
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=86.72 E-value=0.47 Score=46.77 Aligned_cols=32 Identities=28% Similarity=0.258 Sum_probs=28.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
.|+||||| .|+-+|..|++.|.+|.|+|+.+.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 59999977 599999999999999999998753
No 311
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.55 E-value=0.49 Score=47.83 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=27.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|.|||+| +|.-.|..+|.+|++|.|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999965 69999999999999999999765
No 312
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.18 E-value=0.61 Score=46.29 Aligned_cols=31 Identities=32% Similarity=0.474 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|.|||+| +|..+|..|+++|++|.++|+.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999955 79999999999999999999864
No 313
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=85.93 E-value=1.1 Score=45.20 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=27.5
Q ss_pred cEEEEc-chHHHH-HHHHHHhCCCcEEEEccCCC
Q 008915 112 DVIVCG-GTLGIF-IATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 112 DVIIVG-Gg~G~~-~Aa~LAr~GlrVlLIEr~~~ 143 (549)
-|.|+| ||.|++ +|..|+++|++|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 489999 789996 67788999999999998754
No 314
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.77 E-value=0.67 Score=46.45 Aligned_cols=31 Identities=29% Similarity=0.536 Sum_probs=27.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|.|+|+| +|++.|..|++.|.+|.+++|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 58999965 69999999999999999999864
No 315
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=85.70 E-value=0.64 Score=45.57 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=28.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
-.|+|+||| .|+-+|..|++.|.+|.|+||...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 359999976 699999999999999999998654
No 316
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=85.66 E-value=0.41 Score=48.24 Aligned_cols=31 Identities=29% Similarity=0.416 Sum_probs=24.9
Q ss_pred EEEEc-chHHHH-----HHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCG-GTLGIF-----IATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVG-Gg~G~~-----~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.| ||+|=+ +|++||+.|.||+|||-.+-
T Consensus 51 IAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dpq 87 (314)
T 3fwy_A 51 FAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPK 87 (314)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESSS
T ss_pred EEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 66779 887654 67788999999999998753
No 317
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=85.37 E-value=0.62 Score=45.88 Aligned_cols=31 Identities=39% Similarity=0.491 Sum_probs=27.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|.|+|+| +|...|..|+++|++|.++|+.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 48999955 79999999999999999999865
No 318
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=84.36 E-value=0.76 Score=45.88 Aligned_cols=31 Identities=23% Similarity=0.442 Sum_probs=27.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|.|+|+| .|++.|..|+++|.+|.+++|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 58999965 69999999999999999999853
No 319
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=83.83 E-value=0.92 Score=44.04 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|-|| |+|..+|..|++.|.+|+++++..
T Consensus 5 vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~ 36 (247)
T 3ged_A 5 VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE 36 (247)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788885 789999999999999999999864
No 320
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.82 E-value=0.97 Score=43.98 Aligned_cols=30 Identities=33% Similarity=0.266 Sum_probs=27.2
Q ss_pred EEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|.|+|+| +|...|..|+++|++|.+++|.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 8899955 79999999999999999999875
No 321
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=83.67 E-value=0.9 Score=44.12 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=27.8
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-cEEEEccCC
Q 008915 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNT 142 (549)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LAr~Gl-rVlLIEr~~ 142 (549)
..|+|+| ||+|+.+|..|++.|+ ++.|+|...
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4699999 7899999999999998 678888765
No 322
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.41 E-value=0.96 Score=43.50 Aligned_cols=30 Identities=33% Similarity=0.402 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 10 vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 10 VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp EEEECCSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999864
No 323
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=83.19 E-value=1 Score=42.37 Aligned_cols=30 Identities=20% Similarity=0.372 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 35 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSE 35 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788895 689999999999999999999864
No 324
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=83.13 E-value=0.87 Score=45.95 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=27.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|.|||+| +|...|..|+++|++|.++|+.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999965 69999999999999999999875
No 325
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=82.66 E-value=1.1 Score=42.58 Aligned_cols=30 Identities=30% Similarity=0.491 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 6 vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~ 37 (235)
T 3l6e_A 6 IIVTGAGSGLGRALTIGLVERGHQVSMMGRRY 37 (235)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788894 789999999999999999999864
No 326
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.52 E-value=2.6 Score=40.88 Aligned_cols=32 Identities=25% Similarity=0.268 Sum_probs=28.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
|+|.|| |+|..+|..|+++|.+|++++|....
T Consensus 13 vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~ 46 (287)
T 3pxx_A 13 VLVTGGARGQGRSHAVKLAEEGADIILFDICHDI 46 (287)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred EEEeCCCChHHHHHHHHHHHCCCeEEEEcccccc
Confidence 888895 78999999999999999999987543
No 327
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=82.42 E-value=1.1 Score=45.31 Aligned_cols=30 Identities=17% Similarity=0.510 Sum_probs=26.9
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
.|.|+|+| +|++.|..|+++|++|.+++|.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999955 7999999999999999999974
No 328
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=82.09 E-value=1.3 Score=41.49 Aligned_cols=32 Identities=16% Similarity=0.340 Sum_probs=28.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
..|.|+|.| +|.+.|..|+++|++|.+++|.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 459999965 79999999999999999999864
No 329
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=82.00 E-value=1.2 Score=42.65 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 10 ~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 42 (257)
T 3tpc_A 10 FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPP 42 (257)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 788895 6899999999999999999998764
No 330
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=81.98 E-value=1.3 Score=42.98 Aligned_cols=31 Identities=29% Similarity=0.392 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|-|| |+|..+|..|++.|.+|.+.+|...
T Consensus 14 alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~ 46 (242)
T 4b79_A 14 VLVTGGSSGIGAAIAMQFAELGAEVVALGLDAD 46 (242)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 677785 7899999999999999999998764
No 331
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=81.85 E-value=1.3 Score=42.51 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=28.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
|+|.|| |+|..+|..|+++|.+|.+++|....
T Consensus 25 vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 58 (251)
T 3orf_A 25 ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP 58 (251)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 888894 68999999999999999999998653
No 332
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=81.80 E-value=0.84 Score=45.16 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|.|+|+| +|++.|..|+++|.+|.+++|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 58999965 69999999999999999999874
No 333
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=81.64 E-value=1.2 Score=42.59 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 15 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 46 (252)
T 3f1l_A 15 ILVTGASDGIGREAAMTYARYGATVILLGRNE 46 (252)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788885 689999999999999999999864
No 334
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=81.58 E-value=2.9 Score=41.21 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|.|| |+|..+|..|+++|.+|+++++...
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~ 63 (299)
T 3t7c_A 31 AFITGAARGQGRSHAITLAREGADIIAIDVCKQ 63 (299)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEecccc
Confidence 888895 7899999999999999999998754
No 335
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=81.46 E-value=1.1 Score=47.81 Aligned_cols=33 Identities=15% Similarity=0.348 Sum_probs=29.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
...|.|+|.| +|+.+|..||++|++|.++|+.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4679999955 79999999999999999999764
No 336
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=81.40 E-value=1.3 Score=42.34 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (247)
T 3dii_A 5 VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE 36 (247)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999999764
No 337
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.32 E-value=1.3 Score=43.57 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=27.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|.|+|+| +|...|..|+++|++|.+++|.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 58999965 79999999999999999999753
No 338
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=81.29 E-value=1.3 Score=43.14 Aligned_cols=30 Identities=37% Similarity=0.490 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 33 vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~ 64 (281)
T 3ppi_A 33 AIVSGGAGGLGEATVRRLHADGLGVVIADLAA 64 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 888895 789999999999999999998853
No 339
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=81.25 E-value=2.1 Score=41.63 Aligned_cols=30 Identities=27% Similarity=0.455 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 30 ~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 61 (277)
T 4fc7_A 30 AFITGGGSGIGFRIAEIFMRHGCHTVIASRSL 61 (277)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888895 689999999999999999999864
No 340
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=81.23 E-value=1.3 Score=42.93 Aligned_cols=31 Identities=23% Similarity=0.405 Sum_probs=27.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 14 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 46 (271)
T 3tzq_B 14 AIITGACGGIGLETSRVLARAGARVVLADLPET 46 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 788885 6899999999999999999998753
No 341
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.11 E-value=0.58 Score=49.73 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=28.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
--|||+|+| .|..+|..|...|++|+|||+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 359999966 79999999999999999999875
No 342
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=81.01 E-value=1.4 Score=41.86 Aligned_cols=31 Identities=29% Similarity=0.353 Sum_probs=27.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|++|.+++|...
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 10 VLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred EEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 888894 6899999999999999999998764
No 343
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=80.59 E-value=1.5 Score=41.99 Aligned_cols=30 Identities=30% Similarity=0.458 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 9 vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~ 40 (247)
T 3rwb_A 9 ALVTGAAQGIGKAIAARLAADGATVIVSDINA 40 (247)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788885 689999999999999999998764
No 344
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=80.56 E-value=1.4 Score=42.17 Aligned_cols=30 Identities=27% Similarity=0.490 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 12 vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~ 43 (261)
T 3n74_A 12 ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK 43 (261)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 888895 689999999999999999999864
No 345
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=80.54 E-value=1.4 Score=41.93 Aligned_cols=30 Identities=33% Similarity=0.423 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 12 vlITGas~giG~~~a~~l~~~G~~V~~~~r~~ 43 (253)
T 3qiv_A 12 GIVTGSGGGIGQAYAEALAREGAAVVVADINA 43 (253)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEcCCH
Confidence 788894 689999999999999999999864
No 346
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=80.49 E-value=1.4 Score=42.33 Aligned_cols=30 Identities=33% Similarity=0.484 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 11 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~ 42 (255)
T 4eso_A 11 AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE 42 (255)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999863
No 347
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=80.45 E-value=1.5 Score=42.70 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=28.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
++|.|| |+|..+|..|+++|.+|.+++|....
T Consensus 9 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 42 (274)
T 3e03_A 9 LFITGASRGIGLAIALRAARDGANVAIAAKSAVA 42 (274)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeccchh
Confidence 788894 78999999999999999999987643
No 348
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=80.43 E-value=1.5 Score=41.70 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=27.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|++|.+++|...
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 36 (257)
T 1fjh_A 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 788884 6899999999999999999998753
No 349
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=80.40 E-value=1.5 Score=41.28 Aligned_cols=30 Identities=30% Similarity=0.473 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 5 vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (235)
T 3l77_A 5 AVITGASRGIGEAIARALARDGYALALGARSV 36 (235)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 689999999999999999999864
No 350
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=80.38 E-value=1.4 Score=43.31 Aligned_cols=30 Identities=27% Similarity=0.470 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|-|| |+|..+|..|++.|.+|++.+|..
T Consensus 32 alVTGas~GIG~aiA~~la~~Ga~V~i~~r~~ 63 (273)
T 4fgs_A 32 AVITGATSGIGLAAAKRFVAEGARVFITGRRK 63 (273)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 677785 789999999999999999999864
No 351
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.33 E-value=1.2 Score=42.81 Aligned_cols=30 Identities=33% Similarity=0.653 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 10 ~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (250)
T 3nyw_A 10 AIITGASQGIGAVIAAGLATDGYRVVLIARSK 41 (250)
T ss_dssp EEEESTTSHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 689999999999999999999864
No 352
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=80.26 E-value=1.5 Score=42.64 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 16 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 48 (278)
T 3sx2_A 16 AFITGAARGQGRAHAVRLAADGADIIAVDLCDQ 48 (278)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEECCCChHHHHHHHHHHHCCCeEEEEecccc
Confidence 888895 6899999999999999999998753
No 353
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.24 E-value=1.3 Score=41.75 Aligned_cols=31 Identities=32% Similarity=0.415 Sum_probs=27.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|++|.+++|...
T Consensus 6 vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 38 (236)
T 1ooe_A 6 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN 38 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 788894 6899999999999999999998764
No 354
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=80.22 E-value=1.2 Score=43.38 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|-|| |+|.++|..|+++|.+|++.+|...
T Consensus 14 alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~ 46 (261)
T 4h15_A 14 ALITAGTKGAGAATVSLFLELGAQVLTTARARP 46 (261)
T ss_dssp EEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEeccCcHHHHHHHHHHHHcCCEEEEEECCch
Confidence 566684 7899999999999999999998754
No 355
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=80.13 E-value=1.2 Score=43.07 Aligned_cols=30 Identities=30% Similarity=0.467 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 30 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 30 ILITGASQRVGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 788884 689999999999999999999875
No 356
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=80.12 E-value=1.5 Score=42.78 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=27.3
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|+|+| ||+|.++|..|++.|.+|.+++|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 499999 6789999999999999999998753
No 357
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=80.05 E-value=1.6 Score=41.32 Aligned_cols=30 Identities=50% Similarity=0.719 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|++|.+++|..
T Consensus 5 vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~ 36 (239)
T 2ekp_A 5 ALVTGGSRGIGRAIAEALVARGYRVAIASRNP 36 (239)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 689999999999999999999864
No 358
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=80.03 E-value=1.2 Score=43.29 Aligned_cols=32 Identities=31% Similarity=0.455 Sum_probs=27.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
|+|.|| |+|..+|..|+++|.+|.+++|....
T Consensus 17 vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~ 50 (269)
T 3vtz_A 17 AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKS 50 (269)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 788884 68999999999999999999987643
No 359
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=80.01 E-value=1.5 Score=43.60 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=27.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCC--cEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGL--RVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~Gl--rVlLIEr~~ 142 (549)
.-|.|+|+| +|.++|..|++.|+ +|.++|+..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 459999965 79999999999999 999999863
No 360
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=80.00 E-value=1.5 Score=42.81 Aligned_cols=31 Identities=23% Similarity=0.211 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|.|| |+|..+|..|+++|.+|++++|...
T Consensus 14 ~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~ 46 (286)
T 3uve_A 14 AFVTGAARGQGRSHAVRLAQEGADIIAVDICKP 46 (286)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCeEEEEecccc
Confidence 888895 7899999999999999999998753
No 361
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.92 E-value=1.5 Score=42.82 Aligned_cols=30 Identities=27% Similarity=0.470 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 35 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 66 (276)
T 3r1i_A 35 ALITGASTGIGKKVALAYAEAGAQVAVAARHS 66 (276)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788895 689999999999999999999864
No 362
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=79.88 E-value=1.5 Score=42.79 Aligned_cols=30 Identities=30% Similarity=0.440 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 30 vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 61 (277)
T 4dqx_A 30 CIVTGGGSGIGRATAELFAKNGAYVVVADVNE 61 (277)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999999764
No 363
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=79.80 E-value=1.3 Score=44.06 Aligned_cols=33 Identities=24% Similarity=0.529 Sum_probs=28.5
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-cEEEEccCCC
Q 008915 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LAr~Gl-rVlLIEr~~~ 143 (549)
.-|+||| ||+|+.+|..|++.|+ ++.|+|....
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 5699999 7899999999999996 6889997654
No 364
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=79.79 E-value=1.6 Score=41.59 Aligned_cols=30 Identities=27% Similarity=0.510 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 10 AVITGGANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 788894 689999999999999999999865
No 365
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=79.74 E-value=1.5 Score=42.71 Aligned_cols=30 Identities=27% Similarity=0.451 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 27 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 58 (279)
T 3sju_A 27 AFVTGVSSGIGLAVARTLAARGIAVYGCARDA 58 (279)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888895 689999999999999999999864
No 366
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=79.70 E-value=1.3 Score=44.10 Aligned_cols=31 Identities=26% Similarity=0.351 Sum_probs=26.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
--|.|||.| +|...|..|+ +|++|.++|+.+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 459999955 7999999999 999999999764
No 367
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=79.68 E-value=1.5 Score=42.75 Aligned_cols=30 Identities=27% Similarity=0.594 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 8 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 39 (281)
T 3zv4_A 8 ALITGGASGLGRALVDRFVAEGARVAVLDKSA 39 (281)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 368
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=79.65 E-value=1.5 Score=42.60 Aligned_cols=30 Identities=17% Similarity=0.238 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|++++|..
T Consensus 14 ~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~ 45 (277)
T 3tsc_A 14 AFITGAARGQGRAHAVRMAAEGADIIAVDIAG 45 (277)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred EEEECCccHHHHHHHHHHHHcCCEEEEEeccc
Confidence 788885 789999999999999999999854
No 369
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=79.64 E-value=1.2 Score=42.14 Aligned_cols=30 Identities=27% Similarity=0.467 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 17 vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~ 48 (247)
T 3i1j_A 17 ILVTGAARGIGAAAARAYAAHGASVVLLGRTE 48 (247)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEecCH
Confidence 788885 689999999999999999999864
No 370
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=79.58 E-value=1.6 Score=42.18 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 11 ~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 42 (265)
T 3lf2_A 11 AVVTGGSSGIGLATVELLLEAGAAVAFCARDG 42 (265)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 371
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=79.50 E-value=1.3 Score=46.97 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=38.2
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCCCCc
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVE 168 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl~~~ 168 (549)
--|.|||+| +|...|..|+++|++|.++|+.+. +..+.....++.+.+.|.++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e----~a~~~i~~~l~~~~~~G~l~~ 109 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ----RCKQELEVMYAREKSFKRLND 109 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH----HHHHHHHHHHHHHHHTTSCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH----HHHHHHHHHHHHHHHcCCCCH
Confidence 359999965 699999999999999999998764 111111234555666676554
No 372
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=79.49 E-value=1.6 Score=42.50 Aligned_cols=31 Identities=32% Similarity=0.456 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|.|| |+|..+|..|+++|.+|++++|...
T Consensus 13 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~ 45 (281)
T 3s55_A 13 ALITGGARGMGRSHAVALAEAGADIAICDRCEN 45 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 888894 6899999999999999999998754
No 373
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=79.43 E-value=1.6 Score=42.77 Aligned_cols=30 Identities=33% Similarity=0.546 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 19 vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~ 50 (291)
T 3rd5_A 19 VVITGANSGLGAVTARELARRGATVIMAVRDT 50 (291)
T ss_dssp EEEECCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 689999999999999999999864
No 374
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=79.42 E-value=1.7 Score=45.89 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=30.1
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
...+.|+|.| +|+.+|..||++|++|.++|+.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4679999955 799999999999999999998764
No 375
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=79.40 E-value=1.2 Score=43.40 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 36 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 68 (275)
T 4imr_A 36 ALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPG 68 (275)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 777784 7899999999999999999998653
No 376
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=79.39 E-value=1.6 Score=42.74 Aligned_cols=30 Identities=27% Similarity=0.442 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 31 ALITGAGSGIGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 377
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=79.37 E-value=1.5 Score=41.99 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=27.0
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
--|+||||| +|...|..|.+.|.+|.|+++.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 359999976 6999999999999999999864
No 378
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=79.35 E-value=1.8 Score=40.91 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=27.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| ++|..+|..|+++|++|.+++|...
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 788894 6899999999999999999998753
No 379
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=79.25 E-value=1.7 Score=42.76 Aligned_cols=30 Identities=27% Similarity=0.502 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 50 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 50 VLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 888894 689999999999999999999864
No 380
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=79.23 E-value=1.3 Score=43.10 Aligned_cols=30 Identities=23% Similarity=0.454 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 7 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 38 (264)
T 3tfo_A 7 ILITGASGGIGEGIARELGVAGAKILLGARRQ 38 (264)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEeCCccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 778884 689999999999999999999864
No 381
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=79.14 E-value=1.4 Score=46.46 Aligned_cols=46 Identities=26% Similarity=0.327 Sum_probs=34.7
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCcEEEEccCCCCCCCccccCCHHHHHHHHHcCC
Q 008915 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGI 165 (549)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LAr~GlrVlLIEr~~~~~~~r~~~IS~~~l~~L~~lGl 165 (549)
-|.|+| |+.|.++|..|+++|++|.+.|++.... + ...+.|.+.|+
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~-------~-~~~~~L~~~gi 57 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE-------N-PTAQSLLEEGI 57 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG-------C-HHHHHHHHTTC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC-------C-hHHHHHHhCCC
Confidence 499999 6789999989999999999999865311 1 13346777775
No 382
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.14 E-value=1.6 Score=42.04 Aligned_cols=30 Identities=23% Similarity=0.424 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 14 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 45 (264)
T 3ucx_A 14 VVISGVGPALGTTLARRCAEQGADLVLAARTV 45 (264)
T ss_dssp EEEESCCTTHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH
Confidence 788895 689999999999999999999853
No 383
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=79.12 E-value=1.7 Score=42.18 Aligned_cols=30 Identities=27% Similarity=0.452 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 19 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 50 (266)
T 3p19_A 19 VVITGASSGIGEAIARRFSEEGHPLLLLARRV 50 (266)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 689999999999999999999863
No 384
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=79.11 E-value=1.7 Score=42.33 Aligned_cols=30 Identities=33% Similarity=0.368 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|-|| |+|..+|..||+.|.+|++++|..
T Consensus 10 alVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~ 41 (254)
T 4fn4_A 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLE 41 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence 677785 789999999999999999999864
No 385
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=79.00 E-value=1.3 Score=46.89 Aligned_cols=31 Identities=32% Similarity=0.327 Sum_probs=27.9
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|.|||+| +|..+|..|+++|++|.++|+.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999965 79999999999999999999865
No 386
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=78.95 E-value=0.79 Score=40.02 Aligned_cols=31 Identities=29% Similarity=0.523 Sum_probs=26.9
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|.|+| |++|..+|..|++.|.+|.+++|.+
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 499999 5689999999988999999999764
No 387
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=78.87 E-value=1.7 Score=42.32 Aligned_cols=30 Identities=40% Similarity=0.543 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 14 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 45 (281)
T 3svt_A 14 YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNP 45 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788895 689999999999999999999864
No 388
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=78.85 E-value=1.8 Score=42.19 Aligned_cols=29 Identities=28% Similarity=0.347 Sum_probs=26.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
++|.|| |+|..+|..|+++|.+|++++|.
T Consensus 34 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 34 AVVTGAGSGIGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH
Confidence 888895 68999999999999999999864
No 389
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=78.84 E-value=1.6 Score=42.12 Aligned_cols=30 Identities=17% Similarity=0.346 Sum_probs=26.5
Q ss_pred EEEEc--c--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCG--G--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVG--G--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|-| | |+|..+|..|+++|.+|++.+|..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 67778 4 799999999999999999999864
No 390
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=78.83 E-value=1.1 Score=44.19 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=27.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
--|+||||| +|...|..|.+.|.+|.||++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 349999976 79999999999999999999754
No 391
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=78.80 E-value=1.8 Score=41.45 Aligned_cols=30 Identities=37% Similarity=0.504 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 22 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 22 VLVLAASRGIGRAVADVLSQEGAEVTICARNE 53 (249)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 888894 689999999999999999999864
No 392
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=78.77 E-value=1.8 Score=41.33 Aligned_cols=30 Identities=33% Similarity=0.485 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 10 ~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 41 (247)
T 2jah_A 10 ALITGASSGIGEATARALAAEGAAVAIAARRV 41 (247)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 789999999999999999998753
No 393
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=78.66 E-value=1.8 Score=42.46 Aligned_cols=32 Identities=28% Similarity=0.556 Sum_probs=28.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
++|.|| |+|..+|..|+++|.+|.+++|....
T Consensus 12 vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~ 45 (285)
T 3sc4_A 12 MFISGGSRGIGLAIAKRVAADGANVALVAKSAEP 45 (285)
T ss_dssp EEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 788894 78999999999999999999998653
No 394
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=78.65 E-value=2.9 Score=43.96 Aligned_cols=37 Identities=35% Similarity=0.569 Sum_probs=32.1
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
..+||+||||| +|+++|..|+++|++|+|+|+...++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPG 47 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 36899999976 59999999999999999999986543
No 395
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=78.64 E-value=1.5 Score=41.13 Aligned_cols=31 Identities=35% Similarity=0.522 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| ++|..+|..|+++|++|.+++|...
T Consensus 5 vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~ 37 (242)
T 1uay_A 5 ALVTGGASGLGRAAALALKARGYRVVVLDLRRE 37 (242)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc
Confidence 788994 6899999999999999999998764
No 396
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=78.64 E-value=1.7 Score=42.32 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=27.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 18 ~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~ 50 (280)
T 3pgx_A 18 AFITGAARGQGRSHAVRLAAEGADIIACDICAP 50 (280)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEecccc
Confidence 788894 6899999999999999999998643
No 397
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=78.64 E-value=1.8 Score=41.61 Aligned_cols=30 Identities=27% Similarity=0.399 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 11 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 42 (259)
T 4e6p_A 11 ALITGSARGIGRAFAEAYVREGATVAIADIDI 42 (259)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999999753
No 398
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=78.62 E-value=1.4 Score=43.18 Aligned_cols=30 Identities=33% Similarity=0.570 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.++.|..
T Consensus 15 vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 15 AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 778884 789999999999999999999864
No 399
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=78.62 E-value=1.8 Score=41.23 Aligned_cols=30 Identities=40% Similarity=0.608 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 16 vlItGasggiG~~la~~l~~~G~~V~~~~r~~ 47 (260)
T 3awd_A 16 AIVTGGAQNIGLACVTALAEAGARVIIADLDE 47 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999999763
No 400
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=78.61 E-value=1.9 Score=41.73 Aligned_cols=31 Identities=29% Similarity=0.312 Sum_probs=27.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 11 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 43 (264)
T 2dtx_A 11 VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP 43 (264)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 788884 6899999999999999999998764
No 401
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=78.61 E-value=1.4 Score=46.36 Aligned_cols=32 Identities=16% Similarity=0.379 Sum_probs=27.7
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
-|.|+| |+.|+++|..|+++|++|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 389999 56799999899999999999998764
No 402
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=78.59 E-value=1.3 Score=42.58 Aligned_cols=30 Identities=40% Similarity=0.602 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 9 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 40 (257)
T 3imf_A 9 VIITGGSSGMGKGMATRFAKEGARVVITGRTK 40 (257)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 777884 689999999999999999999864
No 403
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=78.57 E-value=1.8 Score=41.04 Aligned_cols=30 Identities=27% Similarity=0.556 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 14 vlITGasggiG~~la~~l~~~G~~V~~~~r~~ 45 (254)
T 2wsb_A 14 AAVTGAGSGIGLEICRAFAASGARLILIDREA 45 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888884 689999999999999999999863
No 404
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=78.41 E-value=1.9 Score=43.87 Aligned_cols=33 Identities=33% Similarity=0.655 Sum_probs=28.1
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-cEEEEccCCC
Q 008915 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LAr~Gl-rVlLIEr~~~ 143 (549)
.-|+|+| ||+|+.+|..|++.|+ ++.|+|....
T Consensus 35 ~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 4599999 7899999999999997 5678887654
No 405
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=78.37 E-value=1.9 Score=41.29 Aligned_cols=30 Identities=37% Similarity=0.540 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|++|.+++|..
T Consensus 9 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (256)
T 2d1y_A 9 VLVTGGARGIGRAIAQAFAREGALVALCDLRP 40 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 788894 689999999999999999999875
No 406
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=78.32 E-value=2 Score=41.86 Aligned_cols=31 Identities=29% Similarity=0.350 Sum_probs=27.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|-|| |+|.++|..|++.|.+|.+++|...
T Consensus 10 alVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~ 42 (258)
T 4gkb_A 10 VIVTGGASGIGGAISMRLAEERAIPVVFARHAP 42 (258)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcc
Confidence 677785 7899999999999999999998753
No 407
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=78.31 E-value=1.3 Score=46.42 Aligned_cols=30 Identities=27% Similarity=0.328 Sum_probs=26.9
Q ss_pred EEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|.|+|.| +|+.+|..|+++|++|.++|+.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899955 79999999999999999999764
No 408
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.31 E-value=1.8 Score=42.34 Aligned_cols=32 Identities=25% Similarity=0.211 Sum_probs=27.9
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
.|.|+|. -+|..+|..|+++|++|.+.||.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4889995 5799999999999999999998753
No 409
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=78.31 E-value=1.3 Score=43.11 Aligned_cols=31 Identities=35% Similarity=0.523 Sum_probs=27.3
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 31 vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~ 63 (266)
T 3uxy_A 31 ALVTGAAGGIGGAVVTALRAAGARVAVADRAVA 63 (266)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEECSSCCT
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 778784 6899999999999999999998754
No 410
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=78.30 E-value=1.5 Score=42.05 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 12 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~ 43 (248)
T 3op4_A 12 ALVTGASRGIGKAIAELLAERGAKVIGTATSE 43 (248)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 778884 689999999999999999998764
No 411
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=78.19 E-value=1.4 Score=44.99 Aligned_cols=32 Identities=22% Similarity=0.342 Sum_probs=28.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-.|.|+|+| .|.++|..|+++|++|.+++|.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999966 69999999999999999999853
No 412
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=78.17 E-value=2 Score=41.05 Aligned_cols=31 Identities=26% Similarity=0.266 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 10 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~ 42 (250)
T 2fwm_X 10 VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT 42 (250)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh
Confidence 788894 6899999999999999999998754
No 413
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=78.12 E-value=2 Score=41.09 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=27.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 15 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 46 (265)
T 2o23_A 15 AVITGGASGLGLATAERLVGQGASAVLLDLPN 46 (265)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 888894 689999999999999999999875
No 414
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=78.07 E-value=1.9 Score=40.75 Aligned_cols=30 Identities=37% Similarity=0.465 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 5 vlItGasggiG~~~a~~l~~~G~~V~~~~r~~ 36 (250)
T 2cfc_A 5 AIVTGASSGNGLAIATRFLARGDRVAALDLSA 36 (250)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999999753
No 415
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=78.00 E-value=3.7 Score=43.29 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=27.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCc-EEEEccCCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLR-VAIVERNTL 143 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~Glr-VlLIEr~~~ 143 (549)
-.|+||||| .|+=+|..+.+.|.+ |.+++|...
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 369999987 588899899999985 999998764
No 416
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.92 E-value=1.9 Score=40.43 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=27.6
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|+|.|| ++|..+|..|+++|++|.++.|.+
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4899995 589999999999999999999865
No 417
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=77.90 E-value=1.9 Score=43.40 Aligned_cols=32 Identities=25% Similarity=0.151 Sum_probs=27.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
..|.|+|+| +|...|..|++.|++|.+++|.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999955 79999999999999999999753
No 418
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=77.88 E-value=1.9 Score=41.73 Aligned_cols=30 Identities=40% Similarity=0.567 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|++|.+++|..
T Consensus 24 ~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 55 (267)
T 1vl8_A 24 ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL 55 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999998863
No 419
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=77.87 E-value=1.9 Score=42.18 Aligned_cols=29 Identities=21% Similarity=0.411 Sum_probs=26.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
|+|.|| |+|..+|..|+++|.+|++++|.
T Consensus 28 ~lVTGas~GIG~~ia~~la~~G~~V~~~~r~ 58 (281)
T 3v2h_A 28 AVITGSTSGIGLAIARTLAKAGANIVLNGFG 58 (281)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 788884 78999999999999999999984
No 420
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=77.71 E-value=2 Score=40.91 Aligned_cols=30 Identities=17% Similarity=0.331 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|++|.+++|..
T Consensus 8 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 39 (245)
T 1uls_A 8 VLITGAAHGIGRATLELFAKEGARLVACDIEE 39 (245)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 689999999999999999998763
No 421
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=77.66 E-value=1.4 Score=43.56 Aligned_cols=30 Identities=40% Similarity=0.577 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 44 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 75 (293)
T 3rih_A 44 VLVTGGTKGIGRGIATVFARAGANVAVAARSP 75 (293)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 777784 689999999999999999999875
No 422
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=77.64 E-value=2 Score=41.45 Aligned_cols=30 Identities=30% Similarity=0.582 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 16 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 47 (267)
T 1iy8_A 16 VLITGGGSGLGRATAVRLAAEGAKLSLVDVSS 47 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999998864
No 423
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=77.63 E-value=1.7 Score=41.63 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=28.8
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
..|.|+|. -+|..+|..|+++|++|.+.+|.+.
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 46999995 4799999999999999999998753
No 424
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=77.57 E-value=2 Score=40.38 Aligned_cols=30 Identities=30% Similarity=0.420 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| ++|..+|..|+++|++|.+++|..
T Consensus 10 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHASGAKVVAVTRTN 41 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889994 689999999999999999999753
No 425
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=77.53 E-value=1.4 Score=43.04 Aligned_cols=30 Identities=27% Similarity=0.420 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 32 vlVTGas~gIG~aia~~la~~G~~V~~~~r~~ 63 (277)
T 3gvc_A 32 AIVTGAGAGIGLAVARRLADEGCHVLCADIDG 63 (277)
T ss_dssp EEETTTTSTHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 777784 689999999999999999999763
No 426
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=77.52 E-value=1.6 Score=46.10 Aligned_cols=31 Identities=26% Similarity=0.414 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|.|+|.| +|+.+|..|+++|++|.++|+.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 58999955 79999999999999999999764
No 427
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=77.51 E-value=2 Score=40.95 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlITGasggiG~~la~~l~~~G~~V~~~~r~~ 41 (264)
T 2pd6_A 10 ALVTGAGSGIGRAVSVRLAGEGATVAACDLDR 41 (264)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 888894 689999999999999999998764
No 428
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=77.50 E-value=2.2 Score=39.21 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| ++|..++..|+++|++|.++.|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 789994 589999999999999999999864
No 429
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=77.47 E-value=1.6 Score=42.10 Aligned_cols=30 Identities=33% Similarity=0.523 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 32 vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 32 AVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 689999999999999999999864
No 430
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=77.45 E-value=2 Score=41.22 Aligned_cols=30 Identities=43% Similarity=0.585 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 15 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 46 (263)
T 3ak4_A 15 AIVTGGSKGIGAAIARALDKAGATVAIADLDV 46 (263)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999998764
No 431
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.44 E-value=1.5 Score=42.37 Aligned_cols=30 Identities=43% Similarity=0.598 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 13 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 44 (262)
T 3pk0_A 13 VVVTGGTKGIGRGIATVFARAGANVAVAGRST 44 (262)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 777784 689999999999999999999864
No 432
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=77.38 E-value=2 Score=41.17 Aligned_cols=30 Identities=33% Similarity=0.506 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (260)
T 2z1n_A 10 AVVTAGSSGLGFASALELARNGARLLLFSRNR 41 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999998864
No 433
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=77.38 E-value=1.5 Score=42.68 Aligned_cols=30 Identities=30% Similarity=0.328 Sum_probs=26.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (270)
T 3ftp_A 31 AIVTGASRGIGRAIALELARRGAMVIGTATTE 62 (270)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 677784 789999999999999999999854
No 434
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=77.27 E-value=2.2 Score=41.05 Aligned_cols=31 Identities=42% Similarity=0.560 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 24 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 56 (253)
T 2nm0_A 24 VLVTGGNRGIGLAIARAFADAGDKVAITYRSGE 56 (253)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 888894 6899999999999999999998754
No 435
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=77.25 E-value=1.5 Score=41.60 Aligned_cols=31 Identities=29% Similarity=0.373 Sum_probs=27.0
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 16 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 48 (249)
T 3f9i_A 16 TSLITGASSGIGSAIARLLHKLGSKVIISGSNE 48 (249)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3888895 689999999999999999998753
No 436
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=77.25 E-value=2.1 Score=41.13 Aligned_cols=30 Identities=23% Similarity=0.558 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (263)
T 3ai3_A 10 AVITGSSSGIGLAIAEGFAKEGAHIVLVARQV 41 (263)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 788884 689999999999999999999864
No 437
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=77.18 E-value=2 Score=42.68 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=28.6
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-.|.|+|. -+|..+|..|++.|++|.++||.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 46999995 579999999999999999999875
No 438
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=77.18 E-value=1.7 Score=45.49 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=28.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
-.|||||.| .|..+|..|.+.|++|++||+.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 359999954 799999999999999999998753
No 439
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=77.13 E-value=2.1 Score=41.19 Aligned_cols=30 Identities=27% Similarity=0.500 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (262)
T 1zem_A 10 CLVTGAGGNIGLATALRLAEEGTAIALLDMNR 41 (262)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 689999999999999999998753
No 440
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=77.09 E-value=2.1 Score=41.00 Aligned_cols=30 Identities=33% Similarity=0.429 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 8 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 39 (254)
T 1hdc_A 8 VIITGGARGLGAEAARQAVAAGARVVLADVLD 39 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999998753
No 441
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=77.06 E-value=2.1 Score=41.04 Aligned_cols=30 Identities=33% Similarity=0.447 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 12 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 43 (260)
T 2ae2_A 12 ALVTGGSRGIGYGIVEELASLGASVYTCSRNQ 43 (260)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888884 689999999999999999998864
No 442
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=77.03 E-value=2.1 Score=41.49 Aligned_cols=30 Identities=37% Similarity=0.505 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 24 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 55 (273)
T 1ae1_A 24 ALVTGGSKGIGYAIVEELAGLGARVYTCSRNE 55 (273)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999999864
No 443
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=77.02 E-value=1.5 Score=42.69 Aligned_cols=30 Identities=37% Similarity=0.460 Sum_probs=26.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (272)
T 4dyv_A 31 AIVTGAGSGVGRAVAVALAGAGYGVALAGRRL 62 (272)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 677784 689999999999999999999863
No 444
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=76.93 E-value=2 Score=42.72 Aligned_cols=30 Identities=30% Similarity=0.411 Sum_probs=26.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|.|+|+| +|++.|..|+ +|.+|.+++|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999965 6999999999 999999999864
No 445
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=76.88 E-value=2.1 Score=42.96 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=28.0
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.-|.|+|+| +|++.|..|+++|++|.+++|.+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 459999955 79999999999999999998753
No 446
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=76.86 E-value=1.4 Score=43.16 Aligned_cols=30 Identities=30% Similarity=0.445 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 11 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 42 (280)
T 3tox_A 11 AIVTGASSGIGRAAALLFAREGAKVVVTARNG 42 (280)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEECCSCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 778884 689999999999999999998864
No 447
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=76.84 E-value=1.5 Score=42.27 Aligned_cols=30 Identities=27% Similarity=0.419 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 15 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 46 (256)
T 3gaf_A 15 AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS 46 (256)
T ss_dssp EEECSCSSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 778884 689999999999999999999854
No 448
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=76.81 E-value=2.1 Score=41.46 Aligned_cols=30 Identities=37% Similarity=0.604 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|++|.+++|..
T Consensus 12 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (270)
T 1yde_A 12 VVVTGGGRGIGAGIVRAFVNSGARVVICDKDE 43 (270)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999998864
No 449
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=76.79 E-value=1.4 Score=43.02 Aligned_cols=30 Identities=30% Similarity=0.445 Sum_probs=25.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|-|| |+|..+|..|++.|.+|++.+|+.
T Consensus 12 alVTGas~GIG~aia~~la~~Ga~Vvi~~~~~ 43 (255)
T 4g81_D 12 ALVTGSARGLGFAYAEGLAAAGARVILNDIRA 43 (255)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEECCSCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 566684 789999999999999999999864
No 450
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=76.75 E-value=1.6 Score=42.21 Aligned_cols=30 Identities=37% Similarity=0.472 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 13 ~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 44 (267)
T 3t4x_A 13 ALVTGSTAGIGKAIATSLVAEGANVLINGRRE 44 (267)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 777784 689999999999999999999864
No 451
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=76.70 E-value=2.2 Score=41.10 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (260)
T 1nff_A 10 ALVSGGARGMGASHVRAMVAEGAKVVFGDILD 41 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999998763
No 452
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=76.69 E-value=2.2 Score=40.16 Aligned_cols=30 Identities=37% Similarity=0.468 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999998753
No 453
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=76.67 E-value=2.2 Score=41.52 Aligned_cols=30 Identities=40% Similarity=0.603 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 32 vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 63 (276)
T 2b4q_A 32 ALVTGGSRGIGQMIAQGLLEAGARVFICARDA 63 (276)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999998753
No 454
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=76.65 E-value=2.2 Score=41.54 Aligned_cols=30 Identities=37% Similarity=0.584 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 25 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 56 (277)
T 2rhc_B 25 ALVTGATSGIGLEIARRLGKEGLRVFVCARGE 56 (277)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999999864
No 455
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=76.63 E-value=2.3 Score=40.47 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCc-EEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLR-VAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~Glr-VlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+ |.+++|..
T Consensus 8 vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 8 VIFVAALGGIGLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred EEEECCCChHHHHHHHHHHHCCCcEEEEEecCc
Confidence 788894 6899999999999997 99998864
No 456
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=76.60 E-value=1.9 Score=42.68 Aligned_cols=32 Identities=25% Similarity=0.230 Sum_probs=27.9
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-.|.|+|. -+|..+|..|++.|++|.++||.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 46999995 579999999999999999998754
No 457
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=76.57 E-value=2 Score=41.01 Aligned_cols=30 Identities=33% Similarity=0.636 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| ++|..+|..|+++|++|.+++|..
T Consensus 17 vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 48 (265)
T 1h5q_A 17 IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA 48 (265)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred EEEECCCchHHHHHHHHHHHCCCeEEEEeCcc
Confidence 889994 689999999999999999999854
No 458
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=76.55 E-value=1.6 Score=42.74 Aligned_cols=30 Identities=43% Similarity=0.565 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 36 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 67 (281)
T 4dry_A 36 ALVTGGGTGVGRGIAQALSAEGYSVVITGRRP 67 (281)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 777784 689999999999999999999864
No 459
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=76.53 E-value=1.8 Score=46.15 Aligned_cols=31 Identities=35% Similarity=0.465 Sum_probs=27.4
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|+|+| |++|..+|..|+..|.+|++.|+.+
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 488999 5789999999999999999999754
No 460
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=76.48 E-value=1.8 Score=41.77 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=27.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
|+|.|| |+|..+|..|+++|.+|.+++|....
T Consensus 31 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 64 (260)
T 3un1_A 31 VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64 (260)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 778884 68999999999999999999987643
No 461
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=76.43 E-value=2.2 Score=40.99 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 19 vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 50 (278)
T 2bgk_A 19 AIITGGAGGIGETTAKLFVRYGAKVVIADIAD 50 (278)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCCh
Confidence 888894 689999999999999999998753
No 462
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=76.43 E-value=1.4 Score=41.23 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
++|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 9 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 41 (223)
T 3uce_A 9 YVVLGGTSGIGAELAKQLESEHTIVHVASRQTG 41 (223)
T ss_dssp EEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc
Confidence 788894 6899999999999999999998754
No 463
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=76.40 E-value=1.6 Score=42.15 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 23 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 54 (266)
T 4egf_A 23 ALITGATKGIGADIARAFAAAGARLVLSGRDV 54 (266)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 778884 689999999999999999999853
No 464
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=76.39 E-value=2.2 Score=40.99 Aligned_cols=30 Identities=40% Similarity=0.589 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (267)
T 2gdz_A 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNL 41 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCcHHHHHHHHHHHCCCEEEEEECCH
Confidence 888894 689999999999999999998753
No 465
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=76.32 E-value=2.3 Score=41.29 Aligned_cols=30 Identities=37% Similarity=0.553 Sum_probs=26.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|+++++..
T Consensus 34 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 65 (271)
T 3v2g_A 34 AFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 888894 689999999999999999997653
No 466
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=76.30 E-value=1.8 Score=41.56 Aligned_cols=30 Identities=27% Similarity=0.461 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 17 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 48 (260)
T 2zat_A 17 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ 48 (260)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999999864
No 467
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=76.29 E-value=1.7 Score=42.01 Aligned_cols=30 Identities=37% Similarity=0.510 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|+++.|..
T Consensus 32 vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (271)
T 4iin_A 32 VLITGASKGIGAEIAKTLASMGLKVWINYRSN 63 (271)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 788884 689999999999999999999853
No 468
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=76.29 E-value=1.8 Score=41.56 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 7 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 38 (260)
T 1x1t_A 7 AVVTGSTSGIGLGIATALAAQGADIVLNGFGD 38 (260)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred EEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 777784 689999999999999999999864
No 469
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=76.25 E-value=2.2 Score=42.11 Aligned_cols=30 Identities=27% Similarity=0.575 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 34 vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~ 65 (301)
T 3tjr_A 34 AVVTGGASGIGLATATEFARRGARLVLSDVDQ 65 (301)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 888894 689999999999999999999864
No 470
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=76.25 E-value=1.8 Score=44.19 Aligned_cols=32 Identities=19% Similarity=0.568 Sum_probs=27.7
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-cEEEEccCC
Q 008915 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNT 142 (549)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LAr~Gl-rVlLIEr~~ 142 (549)
--|+|+| ||+|+.+|..|++.|+ ++.|+|...
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4599999 7899999999999997 688998764
No 471
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=76.20 E-value=2.3 Score=40.67 Aligned_cols=30 Identities=37% Similarity=0.491 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (256)
T 1geg_A 5 ALVTGAGQGIGKAIALRLVKDGFAVAIADYND 36 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999998764
No 472
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=76.19 E-value=1.9 Score=43.94 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=28.6
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-cEEEEccCCC
Q 008915 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LAr~Gl-rVlLIEr~~~ 143 (549)
..|+|+| ||+|+.+|..|++.|+ ++.|+|....
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 4699999 7899999999999998 7889986543
No 473
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=76.15 E-value=1.8 Score=40.55 Aligned_cols=30 Identities=33% Similarity=0.564 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 8 vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~ 39 (234)
T 2ehd_A 8 VLITGASRGIGEATARLLHAKGYRVGLMARDE 39 (234)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 689999999999999999998753
No 474
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=76.13 E-value=1.9 Score=46.10 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
-|.|||+| +|...|..|+++|++|.++|+.+
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 48999965 79999999999999999999865
No 475
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=76.09 E-value=1.9 Score=43.05 Aligned_cols=32 Identities=22% Similarity=0.242 Sum_probs=27.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCC-cEEEEccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGL-RVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~Gl-rVlLIEr~~ 142 (549)
.-|.|+|+| +|..+|..|+++|+ +|.|+|+.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 359999965 79999999999999 999999875
No 476
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=76.08 E-value=1.8 Score=41.28 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=27.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
|+|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 18 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 50 (247)
T 1uzm_A 18 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG 50 (247)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 788884 6899999999999999999998753
No 477
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.03 E-value=2.3 Score=41.04 Aligned_cols=30 Identities=20% Similarity=0.393 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|++|.+++|..
T Consensus 9 vlITGas~gIG~aia~~l~~~G~~V~~~~r~~ 40 (263)
T 2a4k_A 9 ILVTGAASGIGRAALDLFAREGASLVAVDREE 40 (263)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999998864
No 478
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=76.02 E-value=2.3 Score=42.55 Aligned_cols=30 Identities=20% Similarity=0.424 Sum_probs=26.2
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEEEccC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
..|.|+|+| +|++.|..|++.|++|.++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 359999965 6999999999999999999 64
No 479
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=75.99 E-value=2.2 Score=41.97 Aligned_cols=29 Identities=34% Similarity=0.369 Sum_probs=26.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
|+|.|| |+|..+|..|+++|.+|.++++.
T Consensus 52 vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 52 ALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 888894 68999999999999999999875
No 480
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=75.89 E-value=1.9 Score=42.60 Aligned_cols=33 Identities=15% Similarity=0.053 Sum_probs=29.0
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCcEEEEccCCC
Q 008915 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~~ 143 (549)
-.|.|+|. -+|..+|..|+++|++|.++||.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46999995 5799999999999999999998764
No 481
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=75.86 E-value=1.8 Score=41.43 Aligned_cols=29 Identities=28% Similarity=0.480 Sum_probs=26.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
|+|.|| |+|..+|..|+++|.+|.+++|.
T Consensus 12 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 42 (257)
T 3tl3_A 12 AVVTGGASGLGLATTKRLLDAGAQVVVLDIR 42 (257)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc
Confidence 788894 78999999999999999999984
No 482
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=75.84 E-value=2.2 Score=43.25 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCCCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~~~ 144 (549)
|+|.|| |+|..+|..|+++|.+|++++|....
T Consensus 48 vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~ 81 (346)
T 3kvo_A 48 VFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81 (346)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred EEEeCCChHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 888895 78999999999999999999987654
No 483
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=75.77 E-value=2.4 Score=41.10 Aligned_cols=30 Identities=33% Similarity=0.503 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 35 vlVTGasggIG~~la~~l~~~G~~V~~~~r~~ 66 (279)
T 1xg5_A 35 ALVTGASGGIGAAVARALVQQGLKVVGCARTV 66 (279)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEECCh
Confidence 888884 689999999999999999998753
No 484
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=75.63 E-value=1.8 Score=43.14 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|+++++..
T Consensus 49 ~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~ 80 (317)
T 3oec_A 49 AFITGAARGQGRTHAVRLAQDGADIVAIDLCR 80 (317)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCeEEEEeccc
Confidence 777784 789999999999999999999764
No 485
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=75.62 E-value=2.4 Score=40.99 Aligned_cols=30 Identities=17% Similarity=0.304 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 34 vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 65 (272)
T 1yb1_A 34 VLITGAGHGIGRLTAYEFAKLKSKLVLWDINK 65 (272)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEEcCH
Confidence 888894 689999999999999999999753
No 486
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=75.61 E-value=1.9 Score=41.86 Aligned_cols=30 Identities=33% Similarity=0.461 Sum_probs=25.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|-|| |+|..+|..|++.|.+|.+.+|..
T Consensus 12 alVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~ 43 (247)
T 4hp8_A 12 ALVTGANTGLGQAIAVGLAAAGAEVVCAARRA 43 (247)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 555574 789999999999999999999864
No 487
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=75.58 E-value=2.1 Score=41.34 Aligned_cols=29 Identities=17% Similarity=0.551 Sum_probs=26.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
|+|.|| |+|..+|..|+++|.+|++++|.
T Consensus 14 vlVTGas~GIG~aia~~la~~G~~V~~~~r~ 44 (262)
T 3ksu_A 14 IVIAGGIKNLGALTAKTFALESVNLVLHYHQ 44 (262)
T ss_dssp EEEETCSSHHHHHHHHHHTTSSCEEEEEESC
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 788895 78999999999999999999864
No 488
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=75.54 E-value=2.4 Score=41.54 Aligned_cols=30 Identities=37% Similarity=0.457 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 21 vlVTGasggIG~~la~~l~~~G~~V~~~~r~~ 52 (303)
T 1yxm_A 21 AIVTGGATGIGKAIVKELLELGSNVVIASRKL 52 (303)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999999863
No 489
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=75.53 E-value=2.5 Score=41.26 Aligned_cols=29 Identities=41% Similarity=0.605 Sum_probs=25.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~ 141 (549)
++|.|| |+|..+|..|+++|.+|+++++.
T Consensus 32 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 62 (280)
T 4da9_A 32 AIVTGGRRGIGLGIARALAASGFDIAITGIG 62 (280)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEecCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 788884 68999999999999999999864
No 490
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=75.49 E-value=2 Score=40.49 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=27.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCcEEE-EccCC
Q 008915 111 FDVIVCGGT-LGIFIATALSFKGLRVAI-VERNT 142 (549)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LAr~GlrVlL-IEr~~ 142 (549)
..|.|+|.| +|..+|..|++.|++|.+ .+|.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 469999966 799999999999999999 88764
No 491
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=75.48 E-value=6.2 Score=43.63 Aligned_cols=37 Identities=43% Similarity=0.519 Sum_probs=33.5
Q ss_pred CcccEEEEcchH-HHHHHHHHHhCCCcEEEEccCCCCC
Q 008915 109 GTFDVIVCGGTL-GIFIATALSFKGLRVAIVERNTLKG 145 (549)
Q Consensus 109 ~~yDVIIVGGg~-G~~~Aa~LAr~GlrVlLIEr~~~~~ 145 (549)
.+|||+|||.|+ |+++|+.|++.|.+|++|||+...+
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYG 44 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCccc
Confidence 379999999775 9999999999999999999998765
No 492
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=75.46 E-value=1.9 Score=42.95 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=25.7
Q ss_pred EEEEcch-HHHHHHHHHHhCCCcEEEEcc
Q 008915 113 VIVCGGT-LGIFIATALSFKGLRVAIVER 140 (549)
Q Consensus 113 VIIVGGg-~G~~~Aa~LAr~GlrVlLIEr 140 (549)
|.|+|+| +|...|..|+++|++|.+++|
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899955 799999999999999999997
No 493
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=75.46 E-value=2.4 Score=41.44 Aligned_cols=30 Identities=33% Similarity=0.457 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 29 vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 29 AFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999998864
No 494
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=75.45 E-value=2.1 Score=40.97 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 7 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 38 (255)
T 2q2v_A 7 ALVTGSTSGIGLGIAQVLARAGANIVLNGFGD 38 (255)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 788884 689999999999999999999864
No 495
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=75.42 E-value=2.3 Score=46.45 Aligned_cols=33 Identities=33% Similarity=0.655 Sum_probs=28.5
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-cEEEEccCCC
Q 008915 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (549)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LAr~Gl-rVlLIEr~~~ 143 (549)
.-|+||| ||+|+.+|..|++.|+ ++.|+|....
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4699999 7899999999999998 6889987653
No 496
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=75.42 E-value=2.3 Score=42.04 Aligned_cols=31 Identities=26% Similarity=0.495 Sum_probs=27.7
Q ss_pred cEEEEc-ch-HHHHHHHHHHhCCCcEEEEccCC
Q 008915 112 DVIVCG-GT-LGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 112 DVIIVG-Gg-~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
.|.||| .| +|.+.|..|++.|++|.++++.+
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 599999 67 69999999999999999999764
No 497
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=75.41 E-value=1.9 Score=40.93 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 9 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (246)
T 2ag5_A 9 IILTAAAQGIGQAAALAFAREGAKVIATDINE 40 (246)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 689999999999999999999864
No 498
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=75.35 E-value=2 Score=40.75 Aligned_cols=30 Identities=30% Similarity=0.405 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
++|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 8 vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~ 39 (247)
T 3lyl_A 8 ALVTGASRGIGFEVAHALASKGATVVGTATSQ 39 (247)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 778884 689999999999999999999864
No 499
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=75.26 E-value=2.7 Score=39.46 Aligned_cols=32 Identities=28% Similarity=0.313 Sum_probs=27.8
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
..|.|+|. .+|..+|..|++.|++|.+++|.+
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46999995 579999999999999999999864
No 500
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=75.23 E-value=1.9 Score=41.75 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=26.3
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCcEEEEccCC
Q 008915 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (549)
Q Consensus 113 VIIVGG--g~G~~~Aa~LAr~GlrVlLIEr~~ 142 (549)
|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 30 vlVTGas~gIG~aia~~la~~G~~V~~~~r~~ 61 (266)
T 3grp_A 30 ALVTGATGGIGEAIARCFHAQGAIVGLHGTRE 61 (266)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 778884 689999999999999999998753
Done!