Query 008916
Match_columns 549
No_of_seqs 407 out of 2768
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 14:41:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008916.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008916hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 1.6E-43 5.5E-48 356.3 15.4 242 126-378 22-272 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 2.6E-42 8.7E-47 343.2 5.5 229 125-368 20-255 (256)
3 3hqi_A Speckle-type POZ protei 99.9 3.7E-28 1.3E-32 248.0 8.2 201 66-282 104-311 (312)
4 3htm_A Speckle-type POZ protei 99.9 9.5E-27 3.2E-31 216.6 12.2 150 124-282 22-171 (172)
5 4eoz_A Speckle-type POZ protei 99.9 3.3E-24 1.1E-28 193.6 4.7 132 124-263 13-144 (145)
6 2vkp_A BTB/POZ domain-containi 99.8 2.2E-21 7.5E-26 166.4 9.0 101 131-235 3-107 (109)
7 2if5_A Zinc finger and BTB dom 99.8 3.1E-21 1.1E-25 168.5 8.6 107 125-234 14-120 (120)
8 1r29_A B-cell lymphoma 6 prote 99.8 7.8E-21 2.7E-25 167.8 9.5 107 125-235 18-125 (127)
9 2z8h_A Transcription regulator 99.8 5.3E-21 1.8E-25 171.5 8.2 114 125-243 25-138 (138)
10 2ppi_A Gigaxonin; BTB domain, 99.8 1.1E-20 3.6E-25 170.7 7.5 105 125-234 36-144 (144)
11 3b84_A Zinc finger and BTB dom 99.8 1.1E-20 3.8E-25 164.9 7.1 104 125-235 13-116 (119)
12 2yy9_A Zinc finger and BTB dom 99.8 1.4E-20 4.9E-25 167.9 6.8 108 125-240 14-121 (135)
13 2vpk_A Myoneurin; transcriptio 99.8 3.2E-20 1.1E-24 161.2 8.0 106 125-235 11-116 (116)
14 1buo_A POZ domain, protein (pr 99.8 6.7E-20 2.3E-24 160.4 8.2 103 125-235 17-119 (121)
15 2ihc_A Transcription regulator 99.8 2.1E-20 7.3E-25 164.3 3.7 106 125-234 18-123 (124)
16 3ohu_A Transcription regulator 99.8 2.2E-20 7.4E-25 164.4 3.8 104 125-233 21-125 (125)
17 2q81_A MIZ-1 protein; BTB/POZ 99.8 1E-19 3.6E-24 158.7 4.1 102 125-234 16-117 (119)
18 3m5b_A Zinc finger and BTB dom 99.8 2.5E-19 8.6E-24 156.3 6.4 99 125-235 17-117 (119)
19 3ga1_A Nucleus accumbens-assoc 99.8 1.5E-19 5E-24 160.1 5.0 105 125-235 22-126 (129)
20 2eqx_A Kelch repeat and BTB do 99.7 3.2E-18 1.1E-22 145.8 5.9 95 234-341 5-99 (105)
21 3fkc_A Transcriptional regulat 99.7 1.8E-17 6.3E-22 143.7 6.8 93 125-227 20-115 (116)
22 2xn4_A Kelch-like protein 2; s 99.5 2.7E-13 9.3E-18 136.2 13.8 133 397-539 15-214 (302)
23 3ii7_A Kelch-like protein 7; p 99.5 2.8E-13 9.4E-18 136.4 13.6 135 397-540 11-211 (306)
24 2vpj_A Kelch-like protein 12; 99.4 8.2E-13 2.8E-17 132.5 13.6 143 386-540 4-217 (301)
25 1zgk_A Kelch-like ECH-associat 99.4 1.7E-12 5.6E-17 131.1 12.8 134 396-539 23-225 (308)
26 2xn4_A Kelch-like protein 2; s 99.4 1.7E-12 5.9E-17 130.3 12.6 132 398-539 62-261 (302)
27 1zgk_A Kelch-like ECH-associat 99.4 2.4E-12 8.3E-17 129.8 13.7 133 398-540 71-273 (308)
28 2ast_A S-phase kinase-associat 99.4 1.1E-12 3.6E-17 120.0 9.7 107 141-251 3-142 (159)
29 4asc_A Kelch repeat and BTB do 99.4 1.3E-12 4.3E-17 132.3 11.3 124 408-540 68-254 (315)
30 3ii7_A Kelch-like protein 7; p 99.4 2.6E-12 8.9E-17 129.2 13.0 132 398-539 56-257 (306)
31 4asc_A Kelch repeat and BTB do 99.3 2.6E-12 8.8E-17 130.0 11.4 132 398-539 5-206 (315)
32 2vpj_A Kelch-like protein 12; 99.3 6.5E-12 2.2E-16 125.9 13.4 132 398-539 63-263 (301)
33 2woz_A Kelch repeat and BTB do 99.3 1.1E-11 3.8E-16 125.5 12.9 133 397-539 15-216 (318)
34 2woz_A Kelch repeat and BTB do 99.3 4.6E-12 1.6E-16 128.3 9.8 123 409-540 80-264 (318)
35 2zwa_A Leucine carboxyl methyl 99.2 2.3E-12 7.7E-17 145.1 3.4 205 316-539 315-617 (695)
36 2uvk_A YJHT; unknown function, 99.2 1.1E-10 3.9E-15 119.8 11.4 134 397-539 19-262 (357)
37 4ajy_C Transcription elongatio 99.1 1E-10 3.5E-15 97.6 7.5 73 146-222 12-97 (97)
38 2uvk_A YJHT; unknown function, 99.1 5.1E-10 1.8E-14 114.9 11.4 134 398-540 66-327 (357)
39 1fs1_B SKP1, cyclin A/CDK2-ass 98.9 1.3E-09 4.5E-14 97.3 5.5 98 141-247 4-130 (141)
40 2p1m_A SKP1-like protein 1A; F 98.9 4.5E-10 1.5E-14 102.5 2.1 101 145-253 13-143 (160)
41 2zwa_A Leucine carboxyl methyl 98.8 1.6E-08 5.4E-13 113.7 11.4 133 397-538 451-674 (695)
42 1k3i_A Galactose oxidase precu 98.6 4.7E-08 1.6E-12 109.0 9.1 124 407-539 219-420 (656)
43 1k3i_A Galactose oxidase precu 98.5 6.5E-08 2.2E-12 107.9 6.4 123 408-539 167-359 (656)
44 1hv2_A Elongin C, ELC1; protei 98.2 2.3E-06 8E-11 71.2 7.0 77 141-222 6-99 (99)
45 2fnj_C Transcription elongatio 98.1 2.9E-06 9.8E-11 70.3 6.0 73 146-222 11-96 (96)
46 3v7d_A Suppressor of kinetocho 98.1 7.1E-06 2.4E-10 75.2 8.7 106 140-249 8-147 (169)
47 3drz_A BTB/POZ domain-containi 98.0 1.8E-05 6.3E-10 66.7 9.1 93 140-235 7-106 (107)
48 1vcb_B Protein (elongin C); tu 97.5 9.1E-05 3.1E-09 62.9 5.1 79 140-222 18-112 (112)
49 3drx_A BTB/POZ domain-containi 96.8 0.002 6.9E-08 60.0 6.7 93 140-235 13-112 (202)
50 3kvt_A Potassium channel prote 94.9 0.017 6E-07 48.9 3.7 93 140-235 6-104 (115)
51 1s1g_A Potassium voltage-gated 94.2 0.077 2.6E-06 45.5 6.1 88 140-233 14-109 (124)
52 1nn7_A Potassium channel KV4.2 93.3 0.043 1.5E-06 45.7 2.8 80 141-226 2-87 (105)
53 2nz0_B Potassium voltage-gated 93.1 0.1 3.5E-06 45.7 5.0 82 138-225 34-121 (140)
54 1t1d_A Protein (potassium chan 91.3 0.15 5.1E-06 41.9 3.7 83 141-226 3-90 (100)
55 2eqx_A Kelch repeat and BTB do 72.9 3 0.0001 34.1 3.8 35 202-238 6-40 (105)
56 3i3n_A Kelch-like protein 11; 67.6 18 0.00062 34.7 8.8 94 204-302 139-251 (279)
57 2vkp_A BTB/POZ domain-containi 66.9 4.7 0.00016 32.6 3.8 34 237-274 76-109 (109)
58 3htm_A Speckle-type POZ protei 55.6 7.9 0.00027 34.0 3.5 34 204-239 132-165 (172)
59 1r29_A B-cell lymphoma 6 prote 48.7 14 0.00047 30.8 3.7 33 237-273 94-126 (127)
60 2r9r_B Paddle chimera voltage 47.1 18 0.00062 38.3 5.2 81 140-226 53-141 (514)
61 2z8h_A Transcription regulator 45.4 7.2 0.00025 33.2 1.4 35 237-275 100-134 (138)
62 2yy9_A Zinc finger and BTB dom 45.0 8.3 0.00028 32.8 1.7 38 237-278 86-123 (135)
63 3hqi_A Speckle-type POZ protei 43.8 14 0.00049 36.0 3.5 34 204-239 272-305 (312)
64 2vpk_A Myoneurin; transcriptio 40.5 19 0.00065 29.3 3.2 31 237-271 85-115 (116)
65 2q81_A MIZ-1 protein; BTB/POZ 40.3 21 0.0007 29.4 3.4 31 237-271 87-117 (119)
66 1buo_A POZ domain, protein (pr 39.7 27 0.00093 28.7 4.1 33 237-273 88-120 (121)
67 3b84_A Zinc finger and BTB dom 38.7 14 0.00047 30.5 2.1 33 237-273 85-117 (119)
68 3hve_A Gigaxonin; ubiquitin, c 36.7 24 0.00082 33.3 3.7 93 237-359 98-190 (256)
69 2if5_A Zinc finger and BTB dom 34.9 33 0.0011 27.9 3.9 30 237-270 90-119 (120)
70 2ppi_A Gigaxonin; BTB domain, 24.3 30 0.001 29.5 1.8 30 237-270 114-143 (144)
71 4eoz_A Speckle-type POZ protei 21.7 37 0.0013 28.5 1.9 34 237-274 90-123 (145)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=1.6e-43 Score=356.30 Aligned_cols=242 Identities=20% Similarity=0.363 Sum_probs=213.4
Q ss_pred hHhhhccCCCCCceeEEEE---eEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEec----CCCcHHHHHHHhHhHh
Q 008916 126 EAANGNESSWSMDCSTVVR---VKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRI----NASEEAALMELLNFMY 198 (549)
Q Consensus 126 ~~~~~~~~~~~~~~dv~l~---~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~----~~~~~~~f~~lL~fiY 198 (549)
.+..+..+....|+.+++. +++|+|||+|||++|+||++||+++|+|+.+..|+|++ +++++++|+.+|+|+|
T Consensus 22 ~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Y 101 (279)
T 3i3n_A 22 RQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMY 101 (279)
T ss_dssp HHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhC
Confidence 4555665555444444443 45899999999999999999999999999999999972 2789999999999999
Q ss_pred cCceecCCcchHHHHHHHHhhccccchHHHHHHHHHcCCCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhhhhhh
Q 008916 199 SNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMT 278 (549)
Q Consensus 199 tg~l~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf~~v~ 278 (549)
||++.++. +++.+|+.+|++|+++.|++.|+++|.+ .++++||+.++.+|..| ++..|.+.|.+||.+||.++.
T Consensus 102 tg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~~~f~~v~ 175 (279)
T 3i3n_A 102 TGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMY----TLSQLALKAADMIRRNFHKVI 175 (279)
T ss_dssp HSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTHHHHT
T ss_pred cCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHc----CcHHHHHHHHHHHHHHHHHHh
Confidence 99999998 7999999999999999999999999999 89999999999999999 899999999999999999999
Q ss_pred ccchhhcCCCHHHHhcccccCccccCChHHHHHHHHHHHHHhCCChHHHHHHHHHHhhcccCCCCCCHHHHHhhcccCCC
Q 008916 279 KFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDF 358 (549)
Q Consensus 279 ~~s~~fl~L~~~~l~~LL~sd~L~v~sE~~V~~av~~Wi~~~~~~~~~R~~~l~~~Ll~~VRf~~ls~~~L~~~~~~~~l 358 (549)
. +++|++||.+.+..||++|+|+|.+|.+||+++++|++|+ +++|.+++ .+||++||||+|++.+|.+.+..+++
T Consensus 176 ~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~~r~~~~-~~ll~~VRf~l~~~~~L~~~v~~~~l 250 (279)
T 3i3n_A 176 Q-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EELFKLLRLSQMKPTYLTRHVKPERL 250 (279)
T ss_dssp T-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HHHHTTTH-HHHHTTSCGGGSCHHHHHHTTTTSHH
T ss_pred c-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhcCCCCCCHHHHHHHhhccch
Confidence 9 9999999999999999999999999999999999999998 88899988 89999999999999999999888776
Q ss_pred C--ChhHHHHHHHHHHhhhcCC
Q 008916 359 D--HDVASKLVLEALFFKAEAP 378 (549)
Q Consensus 359 ~--~~~~~~ll~ea~~~~~~~~ 378 (549)
. ++.|.+++.+|++||..+.
T Consensus 251 ~~~~~~c~~~l~ea~~~~~~~~ 272 (279)
T 3i3n_A 251 VANNEVCVKLVADAVERHALRA 272 (279)
T ss_dssp HHTCHHHHHHHHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHHHHHhccCch
Confidence 5 6889999999999999754
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=2.6e-42 Score=343.16 Aligned_cols=229 Identities=17% Similarity=0.328 Sum_probs=185.6
Q ss_pred hhHhhhccCCCCCceeEEEEe--EEEEchHHHhcccCHHHHHhhcCCCC--CCCcceEEEecCCCcHHHHHHHhHhHhcC
Q 008916 125 DEAANGNESSWSMDCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGMK--ESEQRHVALRINASEEAALMELLNFMYSN 200 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~--~~f~aHr~iLaa~S~yF~~mf~~~~~--Es~~~~I~L~~~~~~~~~f~~lL~fiYtg 200 (549)
..+..++++.. +|||++.+ ++|+|||.|||++|+||++||++++. |+.+..|.|+ ++++++|+.+|+|+|||
T Consensus 20 ~~l~~l~~~~~--~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~--~v~~~~f~~ll~~~Yt~ 95 (256)
T 3hve_A 20 RALSSFREESR--FCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE--GISVMVMREILDYIFSG 95 (256)
T ss_dssp HHHHTCCC--C--CCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECS--SCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCC--CcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC--CCCHHHHHHHHhhccCC
Confidence 34556665555 55555554 79999999999999999999999887 6677788888 89999999999999999
Q ss_pred ceecCCcchHHHHHHHHhhccccchHHHHHHHHHcCCCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhhhhhhcc
Q 008916 201 TLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKF 280 (549)
Q Consensus 201 ~l~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~ 280 (549)
++.++. +++.+++.+|++|+++.|++.|+++|.+ .++++||+.++.+|..| ++..|.+.|.+||.+||.++.+
T Consensus 96 ~~~i~~-~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~~~f~~v~~- 168 (256)
T 3hve_A 96 QIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAAENCIGIRDFALHY----CLHHVHYLATEYLETHFRDVSS- 168 (256)
T ss_dssp CCCCC--CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCSSTTHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCcccH-hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCHhhHHHHHHHHHHc----CcHHHHHHHHHHHHHHHHHHhC-
Confidence 999999 7999999999999999999999999999 89999999999999999 8999999999999999999999
Q ss_pred chhhcCCCHHHHhcccccCccccCChHHHHHHHHHHHHHhCCChHHHHHHHHHHhhcccCCCCCCHHHHHhhcccCCCC-
Q 008916 281 QDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFD- 359 (549)
Q Consensus 281 s~~fl~L~~~~l~~LL~sd~L~v~sE~~V~~av~~Wi~~~~~~~~~R~~~l~~~Ll~~VRf~~ls~~~L~~~~~~~~l~- 359 (549)
+++|.+||.+.+..||++|+|+|.+|.+||+++++|++|+ +++|.+++ ++||++||||+|++.+|.+.+..++++
T Consensus 169 ~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---~~~R~~~~-~~ll~~VRf~~l~~~~l~~~v~~~~l~~ 244 (256)
T 3hve_A 169 TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---TEIRKVHM-KDVMSALWVSGLDSSYLREQMLNEPLVR 244 (256)
T ss_dssp CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----CCSTTTH-HHHHHHHHHHTTCC-CHHHHHHTSTTHH
T ss_pred CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhCCCCCCCHHHHHHHHhcChHHH
Confidence 9999999999999999999999999999999999999998 67888888 899999999999999999988888776
Q ss_pred -C-hhHHHHHH
Q 008916 360 -H-DVASKLVL 368 (549)
Q Consensus 360 -~-~~~~~ll~ 368 (549)
+ +.|++++.
T Consensus 245 ~~~~~c~~ll~ 255 (256)
T 3hve_A 245 EIVKECSNIPL 255 (256)
T ss_dssp HHHCC------
T ss_pred hhHHHHHHHhh
Confidence 3 34766654
No 3
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.94 E-value=3.7e-28 Score=248.04 Aligned_cols=201 Identities=23% Similarity=0.328 Sum_probs=158.3
Q ss_pred hHhhHHHHHhHHhhhhh-CC----CCCCCCCCcceecccCCCCCccCCCCchhhhhhhcCCCC--hhhHhhhccCCCCCc
Q 008916 66 ADWARDRKRRREDIKKD-NG----LDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEGSPS--GDEAANGNESSWSMD 138 (549)
Q Consensus 66 ~~w~~~~~~~r~~~~~~-~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~d~~~~~~~~~~~~~ 138 (549)
.+||..++++|++++++ .+ +.+++.|+..|+..+..... .+....+..|++ ..++..++++....|
T Consensus 104 ~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~-------~~~~~~~~~p~~~l~~~l~~l~~~~~~~D 176 (312)
T 3hqi_A 104 KDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISG-------QNTMNMVKVPECRLADELGGLWENSRFTD 176 (312)
T ss_dssp CEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEEC-------CCCCSSCCCCCCCHHHHHHHHHHTTCSCC
T ss_pred CCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEeccccccc-------cccccccCCCCchHHHHHHHHHhCCCCCc
Confidence 37999999999999753 22 48888888888754321111 111123444443 467788888777555
Q ss_pred eeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceecCCcchHHHHHHHHh
Q 008916 139 CSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAAD 218 (549)
Q Consensus 139 ~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aA~ 218 (549)
+.+++.+++|+|||+|||++|+||++||.++|+|+.+..|.|+ ++++++|+.+|+||||+++.++. +++.+||.+|+
T Consensus 177 v~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~~L~~iYt~~~~~~~-~~~~~ll~~A~ 253 (312)
T 3hqi_A 177 CCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAAD 253 (312)
T ss_dssp EEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEEC--SSCHHHHHHHHHHHHHSCCTTHH-HHHHHHHHHHH
T ss_pred eEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEec--CCCHHHHHHHHHhhcCCCCCChH-HHHHHHHHHHH
Confidence 5555555899999999999999999999999999999999998 99999999999999999999888 79999999999
Q ss_pred hccccchHHHHHHHHHcCCCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhhhhhhccch
Q 008916 219 KFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQD 282 (549)
Q Consensus 219 ~l~l~~L~~~C~~~L~~l~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~s~ 282 (549)
+|+++.|+..|+++|.+ .++.+||+.++.+|..| ++..|+++|++||..||.++++ ++
T Consensus 254 ~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~A~~~----~~~~L~~~~~~~i~~~~~~v~~-s~ 311 (312)
T 3hqi_A 254 KYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVDFINYHATDVLE-TS 311 (312)
T ss_dssp HTTCHHHHHHHHHHHHT-TCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTC--------
T ss_pred HhCHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHhh-CC
Confidence 99999999999999999 89999999999999999 9999999999999999999987 54
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.94 E-value=9.5e-27 Score=216.56 Aligned_cols=150 Identities=25% Similarity=0.366 Sum_probs=132.7
Q ss_pred hhhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCcee
Q 008916 124 GDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLS 203 (549)
Q Consensus 124 ~d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~ 203 (549)
..++..++++....|+.+++.+++|+|||.||+++|+||++||.++++|+.+..|.|+ ++++++|+.+|+|+|||++.
T Consensus 22 ~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~~l~~~Yt~~~~ 99 (172)
T 3htm_A 22 ADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTGKAP 99 (172)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEEC--SSCHHHHHHHHHHHHHSCCT
T ss_pred HHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEec--CCCHHHHHHHHHHHhCCCCC
Confidence 5677888887775555555555899999999999999999999999999999999998 89999999999999999999
Q ss_pred cCCcchHHHHHHHHhhccccchHHHHHHHHHcCCCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhhhhhhccch
Q 008916 204 TTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQD 282 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~s~ 282 (549)
++. +++.+|+.+|++|+++.|++.|+++|.+ .++++||+.++.+|..| ++..|.+.|.+||.+||.++++ ++
T Consensus 100 ~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~~~~A~~~----~~~~L~~~~~~~i~~~~~~v~~-s~ 171 (172)
T 3htm_A 100 NLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVDFINYHATDVLE-TS 171 (172)
T ss_dssp TGG-GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTC--------
T ss_pred CcH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHHHHHHHc-CC
Confidence 988 7999999999999999999999999999 89999999999999999 8999999999999999999987 54
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.89 E-value=3.3e-24 Score=193.58 Aligned_cols=132 Identities=27% Similarity=0.386 Sum_probs=96.2
Q ss_pred hhhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCcee
Q 008916 124 GDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLS 203 (549)
Q Consensus 124 ~d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~ 203 (549)
..++..++++....|+.+++.+++|+|||.||+++|+||++||.+++.|+.+..|.|+ ++++++|+.+|+|+|||++.
T Consensus 13 ~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~~~~~l~~~Y~~~~~ 90 (145)
T 4eoz_A 13 ADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTGKAP 90 (145)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEEC--SSCHHHHHHHHHHHHHSCCT
T ss_pred HHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEec--CCCHHHHHHHHHhhccCccC
Confidence 5677888887775555555555899999999999999999999999999888999998 89999999999999999999
Q ss_pred cCCcchHHHHHHHHhhccccchHHHHHHHHHcCCCChhhHHHHHHhhhhcccccChHHHH
Q 008916 204 TTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLT 263 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~~~n~~~il~lA~~~~~a~~~~~L~ 263 (549)
++. +++.+++.+|++|+++.|++.|+++|.+ .++++||+.++.+|..| ++.+|+
T Consensus 91 ~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~l~~A~~~----~~~~Lk 144 (145)
T 4eoz_A 91 NLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLK 144 (145)
T ss_dssp TGG-GTHHHHHHHHHHTTCHHHHHHHHCC-------------------------------
T ss_pred CcH-HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CHHHhc
Confidence 988 7999999999999999999999999999 89999999999999999 777775
No 6
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.84 E-value=2.2e-21 Score=166.43 Aligned_cols=101 Identities=28% Similarity=0.440 Sum_probs=83.5
Q ss_pred ccCCCCCceeEEEEe----EEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceecCC
Q 008916 131 NESSWSMDCSTVVRV----KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTA 206 (549)
Q Consensus 131 ~~~~~~~~~dv~l~~----~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i~~ 206 (549)
+++....|+.+++.. ++|+|||.|||++|+||++||.++|.|+. ..|.|+ ++++++|+.+|+|+|||++.++.
T Consensus 3 ~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~--~~~~~~f~~~l~~iYt~~~~~~~ 79 (109)
T 2vkp_A 3 FNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIP--DVEPAAFLILLKYMYSDEIDLEA 79 (109)
T ss_dssp TTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEET--TSCHHHHHHHHHHHHHCCCCCCT
T ss_pred ccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeC--CCCHHHHHHHHHHHcCCCccCCH
Confidence 334443344444444 68999999999999999999999999988 889998 89999999999999999999999
Q ss_pred cchHHHHHHHHhhccccchHHHHHHHHHc
Q 008916 207 APALLDVLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 207 ~~~v~~lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
+++.+++.+|++|+++.|++.|+++|.+
T Consensus 80 -~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 80 -DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp -TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 7999999999999999999999999986
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.84 E-value=3.1e-21 Score=168.55 Aligned_cols=107 Identities=25% Similarity=0.386 Sum_probs=89.6
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
..+..++++....|+.+.+.+++|+|||.||+++|+||++||.++|.|+....|.|+ ++++++|+.+|+|||||++.+
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~ll~~~Yt~~~~~ 91 (120)
T 2if5_A 14 SGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEID--FVSAEALTALMDFAYTATLTV 91 (120)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECC--SSCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeC--CCCHHHHHHHHHHHcCCCCcc
Confidence 355666666664444444444799999999999999999999999999999999998 899999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHH
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLR 234 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~ 234 (549)
+. +++.+++.+|++|+++.|++.|+++|.
T Consensus 92 ~~-~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 92 ST-ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp CG-GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CH-HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 98 799999999999999999999999973
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.83 E-value=7.8e-21 Score=167.75 Aligned_cols=107 Identities=19% Similarity=0.336 Sum_probs=93.9
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEE-ecCCCcHHHHHHHhHhHhcCcee
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVAL-RINASEEAALMELLNFMYSNTLS 203 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L-~~~~~~~~~f~~lL~fiYtg~l~ 203 (549)
+.+..++++....|+.+++.+++|+|||+|||++|+||++||.+++.| ....|.| + ++++++|+.+|+|||||++.
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~--~~~~~~f~~ll~~~Ytg~~~ 94 (127)
T 1r29_A 18 LNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDP--EINPEGFNILLDFMYTSRLN 94 (127)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCT--TSCHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCC--CCCHHHHHHHHHHHcCCCcC
Confidence 455667766654444444444799999999999999999999999998 7788999 6 89999999999999999999
Q ss_pred cCCcchHHHHHHHHhhccccchHHHHHHHHHc
Q 008916 204 TTAAPALLDVLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
++. +++.+|+.+|++|+++.|++.|+++|.+
T Consensus 95 ~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 95 LRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 998 7999999999999999999999999986
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.83 E-value=5.3e-21 Score=171.46 Aligned_cols=114 Identities=15% Similarity=0.202 Sum_probs=97.0
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
+.+..++++....|+.+++.+++|+|||+|||++|+||++||.+++.|+ ..|.++ .++++++|+.+|+|||||++.+
T Consensus 25 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~-~~v~~~~~~~lL~~~Ytg~~~i 101 (138)
T 2z8h_A 25 LSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLP-EEVTVKGFEPLIQFAYTAKLIL 101 (138)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECC-TTSCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeC-CCCCHHHHHHHHHHhcCCCccc
Confidence 4566777666644444444447999999999999999999999988763 567774 3899999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHHcCCCChhhH
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESA 243 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~~~n~ 243 (549)
+. +++.+|+.+|++|+++.|++.|++||.+ +++.+|+
T Consensus 102 ~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~sna 138 (138)
T 2z8h_A 102 SK-DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLDSTS 138 (138)
T ss_dssp CT-TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSCCCC
T ss_pred CH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hcccccC
Confidence 98 7999999999999999999999999999 8887763
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=170.74 Aligned_cols=105 Identities=19% Similarity=0.339 Sum_probs=88.3
Q ss_pred hhHhhhccCCCCCceeEEEEe--EEEEchHHHhcccCHHHHHhhcCCCCC--CCcceEEEecCCCcHHHHHHHhHhHhcC
Q 008916 125 DEAANGNESSWSMDCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGMKE--SEQRHVALRINASEEAALMELLNFMYSN 200 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~--~~f~aHr~iLaa~S~yF~~mf~~~~~E--s~~~~I~L~~~~~~~~~f~~lL~fiYtg 200 (549)
+.+..++++.. +|||++.+ ++|+|||+|||++|+||++||.+++.| +....|.|+ ++++++|+.+|+|||||
T Consensus 36 ~~l~~l~~~~~--~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~--~v~~~~f~~lL~fiYtg 111 (144)
T 2ppi_A 36 RALSSFREESR--FCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE--GISVMVMREILDYIFSG 111 (144)
T ss_dssp HHHHHTTC--C--CCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC--SSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHhcCC--CcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC--CCCHHHHHHHHHHHhCC
Confidence 45666776555 55555554 799999999999999999999998876 566788887 89999999999999999
Q ss_pred ceecCCcchHHHHHHHHhhccccchHHHHHHHHH
Q 008916 201 TLSTTAAPALLDVLMAADKFEVASCMRYCSRLLR 234 (549)
Q Consensus 201 ~l~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~ 234 (549)
++.++. +++.+|+.+|++|+++.|++.|++||+
T Consensus 112 ~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 112 QIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp CCCCCT-TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 999998 799999999999999999999999874
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=164.90 Aligned_cols=104 Identities=25% Similarity=0.322 Sum_probs=88.2
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
+.+..++++....|+.+++++++|+|||.|||++|+||++||.+++ +..|.|+ ++++++|+.+|+|||||++.+
T Consensus 13 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~--~~~~~~f~~ll~~iYtg~~~~ 86 (119)
T 3b84_A 13 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLP--AGFAEIFGLLLDFFYTGHLAL 86 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEEC--GGGHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeC--CCCHHHHHHHHHHHcCCCCcc
Confidence 3455666665544444444447999999999999999999999876 5689998 899999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHHc
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
+. +++.+|+.+|++|+++.|++.|++||.+
T Consensus 87 ~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 87 TS-GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp CT-TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred CH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 98 7999999999999999999999999976
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.81 E-value=1.4e-20 Score=167.95 Aligned_cols=108 Identities=23% Similarity=0.312 Sum_probs=86.4
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
+.+..++++....|+.+++.+++|+|||+|||++|+||++||.+++ +..|.|+ ++++++|+.+|+|||||++.+
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~--~~~~~~f~~lL~fiYtg~~~i 87 (135)
T 2yy9_A 14 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLP--AGFAEIFGLLLDFFYTGHLAL 87 (135)
T ss_dssp HHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEEC--GGGHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeC--CCCHHHHHHHHHHHhCCCCCC
Confidence 3456666665544444444447999999999999999999999876 5679998 899999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHHcCCCCh
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTP 240 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~~ 240 (549)
+. +++.+|+.+|++|+++.|++.|++||.+ .+..
T Consensus 88 ~~-~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~ 121 (135)
T 2yy9_A 88 TS-GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVG 121 (135)
T ss_dssp CT-TTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccC
Confidence 98 7999999999999999999999999988 5643
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.81 E-value=3.2e-20 Score=161.17 Aligned_cols=106 Identities=20% Similarity=0.371 Sum_probs=88.9
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
+.+..++++....|+.+++.+++|+|||.|||++|+||++||.++ .+..|.|+.+++++++|+.+|+|||||++.+
T Consensus 11 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~ 86 (116)
T 2vpk_A 11 ERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNL 86 (116)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCccc
Confidence 345566666554444444444799999999999999999999986 3567777655899999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHHc
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
+. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 87 ~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 87 DS-WNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp CT-TTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CH-HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 98 7999999999999999999999999863
No 14
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.80 E-value=6.7e-20 Score=160.41 Aligned_cols=103 Identities=24% Similarity=0.353 Sum_probs=89.0
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
..+..++++....|+.+.+.+++|+|||.|||++|+||++||.++ ...|.|+ ++++++|+.+|+|+|||++.+
T Consensus 17 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~--~~~~~~f~~ll~~~Ytg~~~~ 89 (121)
T 1buo_A 17 CKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLD--FLSPKTFQQILEYAYTATLQA 89 (121)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEEC--SSCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeC--CCCHHHHHHHHHhhcCCCcCC
Confidence 455666666664444444444799999999999999999999874 4578888 899999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHHc
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
+. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 90 ~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 90 KA-EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp CG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CH-HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 98 7999999999999999999999999986
No 15
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.79 E-value=2.1e-20 Score=164.32 Aligned_cols=106 Identities=15% Similarity=0.216 Sum_probs=87.5
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
+.+.+++++....|+.+++.+++|+|||.|||++|+||++||.+++.|+ ..|.++ .++++++|+.+|+|||||++.+
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~-~~v~~~~f~~lL~~iYtg~~~i 94 (124)
T 2ihc_A 18 LSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLP-EEVTVKGFEPLIQFAYTAKLIL 94 (124)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECC-TTSCHHHHHHHHHHHHHSEEEE
T ss_pred HHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeec-CCcCHHHHHHHHHHhcCCCccc
Confidence 4566677766644444444447999999999999999999999998764 567774 3899999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHH
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLR 234 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~ 234 (549)
+. +++.+|+.+|++|+++.|++.|++||+
T Consensus 95 ~~-~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 95 SK-ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp ET-TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CH-HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 98 799999999999999999999999875
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.79 E-value=2.2e-20 Score=164.43 Aligned_cols=104 Identities=19% Similarity=0.280 Sum_probs=88.7
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCC-CcHHHHHHHhHhHhcCcee
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINA-SEEAALMELLNFMYSNTLS 203 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~-~~~~~f~~lL~fiYtg~l~ 203 (549)
..+.+++++....|+.+++.+++|+|||.|||++|+||++||.+++.| ...|.++ + +++++|+.+|+|||||++.
T Consensus 21 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~--~~~~~~~f~~~l~~iYtg~~~ 96 (125)
T 3ohu_A 21 LGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLP--EEVTARGFGPLLQFAYTAKLL 96 (125)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECC--TTCCHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeC--CCCCHHHHHHHHHhHcCCceE
Confidence 345566666554444444444799999999999999999999998877 5678887 6 9999999999999999999
Q ss_pred cCCcchHHHHHHHHhhccccchHHHHHHHH
Q 008916 204 TTAAPALLDVLMAADKFEVASCMRYCSRLL 233 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L 233 (549)
++. +++.+|+.+|++|+++.|++.|++||
T Consensus 97 ~~~-~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 97 LSR-ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp ECT-TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred ECH-HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 999 79999999999999999999998765
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.77 E-value=1e-19 Score=158.69 Aligned_cols=102 Identities=27% Similarity=0.393 Sum_probs=85.5
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
+.+.+++++....|+.+++.+++|+|||.|||++|+||++||.++ +..|.++ ++++++|+.+|+|||||++.+
T Consensus 16 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~--~~~~~~f~~ll~~~Ytg~~~i 88 (119)
T 2q81_A 16 EQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLD--ISNAAGLGQVLEFMYTAKLSL 88 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGG--GCCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeC--CCCHHHHHHHHHHHcCCCCcc
Confidence 345566666554444444444799999999999999999999863 3456676 889999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHH
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLR 234 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~ 234 (549)
+. +++.+|+.+|++|+++.|++.|++||.
T Consensus 89 ~~-~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 89 SP-ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CT-TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CH-HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99 799999999999999999999999985
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.77 E-value=2.5e-19 Score=156.25 Aligned_cols=99 Identities=20% Similarity=0.230 Sum_probs=84.6
Q ss_pred hhHhhhccCCCCCceeEEEEe--EEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCce
Q 008916 125 DEAANGNESSWSMDCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTL 202 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~--~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l 202 (549)
+.+.+.++...+.+|||++.+ ++|+|||+|||++|+||++ .+..|.|+ ++++++|+.+|+|||||++
T Consensus 17 ~~~l~~l~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~--~v~~~~f~~ll~fiYtg~~ 85 (119)
T 3m5b_A 17 DRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGE--GISPSTFAQLLNFVYGESV 85 (119)
T ss_dssp CHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCS--SCCHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeC--CCCHHHHHHHHHHHcCCCc
Confidence 344444455566788888877 6999999999999999974 34678887 9999999999999999999
Q ss_pred ecCCcchHHHHHHHHhhccccchHHHHHHHHHc
Q 008916 203 STTAAPALLDVLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 203 ~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
.++. +++.+||.+|++|+++.|++.|++++++
T Consensus 86 ~i~~-~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ELQP-GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EECG-GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 9999 7999999999999999999999999875
No 19
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.77 E-value=1.5e-19 Score=160.09 Aligned_cols=105 Identities=21% Similarity=0.299 Sum_probs=82.5
Q ss_pred hhHhhhccCCCCCceeEEEEeEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCceec
Q 008916 125 DEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST 204 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i 204 (549)
..+..++++....|+.+++.+++|+|||.|||++|+||++||.++ ....|.|+ .++++++|+.+|+|||||++.+
T Consensus 22 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~-~~~~~~~f~~ll~~iYtg~~~i 96 (129)
T 3ga1_A 22 ECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELP-AAVQPQSFQQILSFCYTGRLSM 96 (129)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECC-TTCCHHHHHHHHHHHHHSEEEC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEEC-CCCCHHHHHHHHHHHhCCcccc
Confidence 345566666554444444444799999999999999999999886 45678884 2799999999999999999999
Q ss_pred CCcchHHHHHHHHhhccccchHHHHHHHHHc
Q 008916 205 TAAPALLDVLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 205 ~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
+. +++.+|+.+|++|+++.|++.|++||.+
T Consensus 97 ~~-~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 97 NV-GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp CT-TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred CH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99 7999999999999999999999999987
No 20
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=3.2e-18 Score=145.79 Aligned_cols=95 Identities=16% Similarity=0.223 Sum_probs=90.6
Q ss_pred HcCCCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhhhhhhccchhhcCCCHHHHhcccccCccccCChHHHHHHH
Q 008916 234 RNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFV 313 (549)
Q Consensus 234 ~~l~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~s~~fl~L~~~~l~~LL~sd~L~v~sE~~V~~av 313 (549)
.+ +++++||+.++.+|+.| ++.+|.++|.+||.+||.++.+ +++|++||.+.|..||++| |.+|.+||+|+
T Consensus 5 ~~-~L~~~NCl~i~~~A~~~----~~~~L~~~a~~fi~~nF~~v~~-~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av 75 (105)
T 2eqx_A 5 SS-GVQVGNCLQVMWLADRH----SDPELYTAAKHCAKTHLAQLQN-TEEFLHLPHRLLTDIISDG---VPCSQNPTEAI 75 (105)
T ss_dssp CC-CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTCHHHHT-SHHHHHSCHHHHHHHHHTC---EETTSCHHHHH
T ss_pred hc-cCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHh-cccHhhCCHHHHHHHHcCC---CCCHHHHHHHH
Confidence 45 79999999999999999 9999999999999999999999 9999999999999999997 78999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHhhcccCC
Q 008916 314 LKWARAQYPRVEERREVLGSRLARFIRF 341 (549)
Q Consensus 314 ~~Wi~~~~~~~~~R~~~l~~~Ll~~VRf 341 (549)
++|++|+ +++|.+++ ++||++||+
T Consensus 76 ~~Wv~~d---~~~R~~~~-~~Ll~~VR~ 99 (105)
T 2eqx_A 76 EAWINFN---KEEREAFA-ESLRTSLKE 99 (105)
T ss_dssp HHHHHTT---HHHHHHHH-HHHHHHCCE
T ss_pred HHHHHcC---HHHHHHHH-HHHHHHHHH
Confidence 9999998 88899998 899999995
No 21
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.69 E-value=1.8e-17 Score=143.74 Aligned_cols=93 Identities=22% Similarity=0.339 Sum_probs=79.1
Q ss_pred hhHhhhccCCCCCceeEEEEe--EEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCce
Q 008916 125 DEAANGNESSWSMDCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTL 202 (549)
Q Consensus 125 d~~~~~~~~~~~~~~dv~l~~--~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l 202 (549)
..+..++++.. +|||++.+ ++|+|||.|||++|+||++||.++ +..|.|+ ++++++|+.+|+|+|||++
T Consensus 20 ~~l~~~~~~~~--~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~--~~~~~~f~~~l~~~Ytg~~ 90 (116)
T 3fkc_A 20 NSLNEQRGHGL--FCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELS--FIRAEIFAEILNYIYSSKI 90 (116)
T ss_dssp HHHHHHHHHTT--TCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEEC--SSCHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHhcCC--ceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeC--CCCHHHHHHHHHhhcCCCc
Confidence 34555666555 55555554 799999999999999999999875 5688998 9999999999999999999
Q ss_pred -ecCCcchHHHHHHHHhhccccchHH
Q 008916 203 -STTAAPALLDVLMAADKFEVASCMR 227 (549)
Q Consensus 203 -~i~~~~~v~~lL~aA~~l~l~~L~~ 227 (549)
.++. +++.+++.+|++|+++.|++
T Consensus 91 ~~~~~-~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 91 VRVRS-DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CSCCH-HHHHHHHHHHHHHTCHHHHT
T ss_pred CCCCH-HHHHHHHHHHHHhCccccCc
Confidence 6888 79999999999999999874
No 22
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.47 E-value=2.7e-13 Score=136.17 Aligned_cols=133 Identities=17% Similarity=0.146 Sum_probs=107.2
Q ss_pred ccceeeecc-----CceeeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCccc-cc---------ccccc-
Q 008916 397 VERAYKYRP-----VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQGF-FL---------SAHCN- 457 (549)
Q Consensus 397 ~~~~~~~~~-----~~~v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g~-~~---------~~~~~- 457 (549)
.+.+|+.++ .+.+++||+.++.|.. ||.+|..|++++.+++|| ++||... .. ....|
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVF----AVGGFNGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EESCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEE----EEeCcCCCccccceEEECCCCCcee
Confidence 456777655 4679999999999998 678899999999999999 9999731 11 11223
Q ss_pred ----ccCCCcceEEEEEeCeec-------CCcceeeeccccceeecC---CcceecCCCce------------EEEEcCc
Q 008916 458 ----MDQQSSFHCFGLFLGMQE-------KGSVSFAVDYEFAARSKP---TEEFVSKYKGN------------YTFTGGK 511 (549)
Q Consensus 458 ----m~~~r~~~~~~~~~g~i~-------~g~l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv~GG~ 511 (549)
|+.+|..|++++++|+++ ...+. .+ |+||| +|+.+++||.+ ||++||.
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-~~-----~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 164 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLS-SV-----EAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGY 164 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEE-EE-----EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCE
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCCccCc-eE-----EEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCC
Confidence 999999999999999992 12233 47 99999 99999999987 9999998
Q ss_pred cCCC----CceEEc-c----Ccee-------------eeCCeeEEEcCcc
Q 008916 512 AVGY----RNLFAI-P----WTSF-------------MADDSLYFINGIL 539 (549)
Q Consensus 512 ~~~~----~~v~~y-p----W~~~-------------~~~~~iyviGG~~ 539 (549)
+... +++++| | |+.+ +++++||++||..
T Consensus 165 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 165 DVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHD 214 (302)
T ss_dssp ETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBS
T ss_pred CCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCC
Confidence 7542 679999 7 9876 8899999999964
No 23
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.47 E-value=2.8e-13 Score=136.38 Aligned_cols=135 Identities=15% Similarity=0.131 Sum_probs=108.0
Q ss_pred ccceeeecc---CceeeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCccccc---------ccccc----
Q 008916 397 VERAYKYRP---VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQGFFL---------SAHCN---- 457 (549)
Q Consensus 397 ~~~~~~~~~---~~~v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g~~~---------~~~~~---- 457 (549)
.+.+|+.++ .+.++.|||.+++|.. ||.+|..|++++++|+|| ++||..... ....|
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVY----ILGGSQLFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEE----EECCBSSSBCCEEEEEETTTTEEEEEE
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEE----EEeCCCCCCcceEEEEeCCCCeEEECC
Confidence 367787655 5789999999999998 678899999999999999 999975111 11123
Q ss_pred -ccCCCcceEEEEEeCeec--CCc-----ceeeeccccceeecC---CcceecCCCce------------EEEEcCccCC
Q 008916 458 -MDQQSSFHCFGLFLGMQE--KGS-----VSFAVDYEFAARSKP---TEEFVSKYKGN------------YTFTGGKAVG 514 (549)
Q Consensus 458 -m~~~r~~~~~~~~~g~i~--~g~-----l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv~GG~~~~ 514 (549)
|+.+|..|++++++|+++ .|. ....+ ++||| +|+.+++||.+ ||++||....
T Consensus 87 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~-----~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 87 GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLF-----ECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCE-----EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESC
T ss_pred CCCccccceeEEEECCEEEEECCCCCCCcEeeeE-----EEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCC
Confidence 999999999999999993 221 12247 99999 89999999987 9999998654
Q ss_pred ------CCceEEc-c----Ccee-------------eeCCeeEEEcCccc
Q 008916 515 ------YRNLFAI-P----WTSF-------------MADDSLYFINGILH 540 (549)
Q Consensus 515 ------~~~v~~y-p----W~~~-------------~~~~~iyviGG~~~ 540 (549)
.+++++| | |+.+ +++++||++||...
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 211 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNG 211 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEET
T ss_pred CCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCC
Confidence 3679999 7 9887 78999999999643
No 24
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.43 E-value=8.2e-13 Score=132.46 Aligned_cols=143 Identities=19% Similarity=0.222 Sum_probs=108.3
Q ss_pred cccccccccc-cccceeeecc-------CceeeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCccc----
Q 008916 386 AEESVTLNRR-FVERAYKYRP-------VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQGF---- 450 (549)
Q Consensus 386 ~~~t~~~~r~-~~~~~~~~~~-------~~~v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g~---- 450 (549)
+.+++| |. ..+.+|+.++ .+.+++|||.+++|.. ||.+|..|++++.+++|| ++||...
T Consensus 4 ~~~~~p--r~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~----v~GG~~~~~~~ 77 (301)
T 2vpj_A 4 GPRTRA--RLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIY----VIGGYDGRSRL 77 (301)
T ss_dssp -----------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCSSCBC
T ss_pred Cccccc--cccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEE----EEcCCCCCccC
Confidence 344555 43 3456787665 4678999999999998 667899999999999999 9999731
Q ss_pred ------cccccc---c-----ccCCCcceEEEEEeCeec--CC-----cceeeeccccceeecC---CcceecCCCce--
Q 008916 451 ------FLSAHC---N-----MDQQSSFHCFGLFLGMQE--KG-----SVSFAVDYEFAARSKP---TEEFVSKYKGN-- 504 (549)
Q Consensus 451 ------~~~~~~---~-----m~~~r~~~~~~~~~g~i~--~g-----~l~~tV~~~~~E~ydp---~W~~v~~l~~~-- 504 (549)
...... | |+.+|..|++++++|+++ .| .+. .+ ++||| +|+.+++||.+
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~-~~-----~~~d~~~~~W~~~~~~p~~r~ 151 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHT-SM-----ERYDPNIDQWSMLGDMQTARE 151 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCC-EE-----EEEETTTTEEEEEEECSSCCB
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccc-eE-----EEEcCCCCeEEECCCCCCCcc
Confidence 111223 5 899999999999999993 22 233 47 99999 99999999976
Q ss_pred ----------EEEEcCccCCC--CceEEc-c----Ccee-------------eeCCeeEEEcCccc
Q 008916 505 ----------YTFTGGKAVGY--RNLFAI-P----WTSF-------------MADDSLYFINGILH 540 (549)
Q Consensus 505 ----------iyv~GG~~~~~--~~v~~y-p----W~~~-------------~~~~~iyviGG~~~ 540 (549)
||++||.+... +++++| | |+.+ +++++||++||...
T Consensus 152 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 152 GAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDG 217 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred cceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCC
Confidence 99999987654 789999 7 9876 78999999999743
No 25
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.39 E-value=1.7e-12 Score=131.08 Aligned_cols=134 Identities=18% Similarity=0.194 Sum_probs=108.2
Q ss_pred cccceeeecc-----CceeeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCcc----c-ccc---------
Q 008916 396 FVERAYKYRP-----VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG----F-FLS--------- 453 (549)
Q Consensus 396 ~~~~~~~~~~-----~~~v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g----~-~~~--------- 453 (549)
..+.+|+.++ .+.+++|||.+++|.. ||.+|..+++++++++|| ++||.. . ...
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLY----AVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCEEEETTEEEECCCEEEEETT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEE----EECCCcCCCCCCeecceEEEECCC
Confidence 4467888655 5789999999999998 677899999999999999 999972 1 111
Q ss_pred cccc-----ccCCCcceEEEEEeCeec--CC-----cceeeeccccceeecC---CcceecCCCce------------EE
Q 008916 454 AHCN-----MDQQSSFHCFGLFLGMQE--KG-----SVSFAVDYEFAARSKP---TEEFVSKYKGN------------YT 506 (549)
Q Consensus 454 ~~~~-----m~~~r~~~~~~~~~g~i~--~g-----~l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iy 506 (549)
...| |+.+|..|++++++|+++ .| .+. .| |+||| +|+.+++||.+ ||
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-~~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 172 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHN-SV-----ERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLY 172 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECC-CE-----EEEETTTTEEEECCCCSSCCBSCEEEEETTEEE
T ss_pred CCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccc-cE-----EEECCCCCeEeECCCCCccccceEEEEECCEEE
Confidence 1123 999999999999999993 22 233 47 99999 99999999986 99
Q ss_pred EEcCccCCC--CceEEc-c----Ccee-------------eeCCeeEEEcCcc
Q 008916 507 FTGGKAVGY--RNLFAI-P----WTSF-------------MADDSLYFINGIL 539 (549)
Q Consensus 507 v~GG~~~~~--~~v~~y-p----W~~~-------------~~~~~iyviGG~~ 539 (549)
++||.+... +++++| | |+.+ +++++||++||..
T Consensus 173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 225 (308)
T 1zgk_A 173 AVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYD 225 (308)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred EEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCC
Confidence 999987654 789999 7 9876 7899999999964
No 26
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.38 E-value=1.7e-12 Score=130.26 Aligned_cols=132 Identities=17% Similarity=0.229 Sum_probs=106.4
Q ss_pred cceeeecc------CceeeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCcccc----------cccccc-
Q 008916 398 ERAYKYRP------VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQGFF----------LSAHCN- 457 (549)
Q Consensus 398 ~~~~~~~~------~~~v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g~~----------~~~~~~- 457 (549)
+.+|+.++ .+.+++||+.+++|.. |+.+|..|++++++|+|| ++||.... .....|
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLY----AVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEE----EEcCCCCCccCceEEEEeCCCCeEe
Confidence 56777654 3678999999999998 678899999999999999 99997311 111223
Q ss_pred ----ccCCCcceEEEEEeCeec--CCc-------ceeeeccccceeecC---CcceecCCCce------------EEEEc
Q 008916 458 ----MDQQSSFHCFGLFLGMQE--KGS-------VSFAVDYEFAARSKP---TEEFVSKYKGN------------YTFTG 509 (549)
Q Consensus 458 ----m~~~r~~~~~~~~~g~i~--~g~-------l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv~G 509 (549)
|+.+|..|++++++|+++ .|. +. .+ ++||| +|+.+++||.+ ||++|
T Consensus 138 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~-~~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 211 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS-TV-----ECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVG 211 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC-CE-----EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred ecCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc-EE-----EEEeCCCCcEEECCCCccccccccEEEECCEEEEEC
Confidence 999999999999999993 221 33 47 99999 99999999986 99999
Q ss_pred CccCCC--CceEEc-c----Ccee-------------eeCCeeEEEcCcc
Q 008916 510 GKAVGY--RNLFAI-P----WTSF-------------MADDSLYFINGIL 539 (549)
Q Consensus 510 G~~~~~--~~v~~y-p----W~~~-------------~~~~~iyviGG~~ 539 (549)
|.++.. +++++| | |+.+ +++++||++||..
T Consensus 212 G~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~ 261 (302)
T 2xn4_A 212 GHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDD 261 (302)
T ss_dssp CBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred CCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcC
Confidence 987644 779999 7 9876 7899999999964
No 27
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.38 E-value=2.4e-12 Score=129.84 Aligned_cols=133 Identities=12% Similarity=0.096 Sum_probs=106.7
Q ss_pred cceeeeccC----------ceeeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCccc---c-------ccc
Q 008916 398 ERAYKYRPV----------KVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQGF---F-------LSA 454 (549)
Q Consensus 398 ~~~~~~~~~----------~~v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g~---~-------~~~ 454 (549)
+.+|+.++. +.+++|||.+++|.. |+.+|..+++++++|+|| ++||... . ...
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIY----AVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEE----EECCEETTEECCCEEEEETTT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEE----EEcCCCCCcccccEEEECCCC
Confidence 567776543 578999999999998 677899999999999999 9999731 1 111
Q ss_pred ccc-----ccCCCcceEEEEEeCeec--CC-----cceeeeccccceeecC---CcceecCCCce------------EEE
Q 008916 455 HCN-----MDQQSSFHCFGLFLGMQE--KG-----SVSFAVDYEFAARSKP---TEEFVSKYKGN------------YTF 507 (549)
Q Consensus 455 ~~~-----m~~~r~~~~~~~~~g~i~--~g-----~l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv 507 (549)
..| |+.+|..|+.++++++|+ .| .+. .+ ++||| +|+.+++||.+ ||+
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-~~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 220 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLN-SA-----ECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYA 220 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCC-CE-----EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred CeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCc-eE-----EEEeCCCCeEeeCCCCCCccccceEEEECCEEEE
Confidence 223 899999999999999993 22 233 47 99999 99999999987 999
Q ss_pred EcCccCCC--CceEEc-c----Ccee-------------eeCCeeEEEcCccc
Q 008916 508 TGGKAVGY--RNLFAI-P----WTSF-------------MADDSLYFINGILH 540 (549)
Q Consensus 508 ~GG~~~~~--~~v~~y-p----W~~~-------------~~~~~iyviGG~~~ 540 (549)
+||.+... +++++| | |+.+ +++++||++||...
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDG 273 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCC
Confidence 99987553 789999 7 9876 78999999999643
No 28
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.38 E-value=1.1e-12 Score=120.04 Aligned_cols=107 Identities=18% Similarity=0.330 Sum_probs=85.7
Q ss_pred EEEEe---EEEEchHHHhcccCHHHHHhhcC-CCC-CCCcceEEEecCCCcHHHHHHHhHhHhcCc--------------
Q 008916 141 TVVRV---KTLHISSPILAAKSPFFYKLFSN-GMK-ESEQRHVALRINASEEAALMELLNFMYSNT-------------- 201 (549)
Q Consensus 141 v~l~~---~~f~aHr~iLaa~S~yF~~mf~~-~~~-Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~-------------- 201 (549)
|+|.. +.|.+||.+ |+.|+||++||.+ ++. |+.+..|.|+ ++++.+|+.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~--~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLP--NVNAAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECT--TSCHHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCC--CccHHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 56653 689999999 8999999999998 777 7777888888 999999999999999987
Q ss_pred ------------eecCCcchHHHHHHHHhhccccchHHHHHHHHHcC--CCChhhHHHHHHhhh
Q 008916 202 ------------LSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNM--PMTPESALLYLELPS 251 (549)
Q Consensus 202 ------------l~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l--~l~~~n~~~il~lA~ 251 (549)
+.++. +++.+|+.||++|++..|+++|++++..+ ..+++.+-.++.++.
T Consensus 80 ~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~ 142 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKN 142 (159)
T ss_dssp -CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCC
T ss_pred chhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCC
Confidence 66777 79999999999999999999999999652 345555555555443
No 29
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.38 E-value=1.3e-12 Score=132.29 Aligned_cols=124 Identities=12% Similarity=-0.018 Sum_probs=100.3
Q ss_pred eeeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCcc----ccccc---------ccc-----ccCCCcceE
Q 008916 408 VVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG----FFLSA---------HCN-----MDQQSSFHC 466 (549)
Q Consensus 408 ~v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g----~~~~~---------~~~-----m~~~r~~~~ 466 (549)
.+++|||.+++|.. ||.+|..|++++++++|| ++||.. ..... ..| |+.+|..|+
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 143 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIY----VVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT 143 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEETTEEE----EECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEECCEEE----EEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee
Confidence 48899999999998 678899999999999999 999953 11111 123 999999999
Q ss_pred EEEEeCeec--CCc-----ceeeeccccceeecC---CcceecCCCce------------EEEEcCccCCC--CceEEc-
Q 008916 467 FGLFLGMQE--KGS-----VSFAVDYEFAARSKP---TEEFVSKYKGN------------YTFTGGKAVGY--RNLFAI- 521 (549)
Q Consensus 467 ~~~~~g~i~--~g~-----l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv~GG~~~~~--~~v~~y- 521 (549)
+++++|+++ .|. ....| ++||| +|+.+++||.+ ||++||.+... +++++|
T Consensus 144 ~~~~~~~iyv~GG~~~~~~~~~~~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 218 (315)
T 4asc_A 144 VLSHMDLVYVIGGKGSDRKCLNKM-----CVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYS 218 (315)
T ss_dssp EEEETTEEEEECCBCTTSCBCCCE-----EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEE
T ss_pred EEEECCEEEEEeCCCCCCcccceE-----EEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEE
Confidence 999999992 222 12347 99999 89999999987 99999987654 679999
Q ss_pred c----Ccee-------------eeCCeeEEEcCccc
Q 008916 522 P----WTSF-------------MADDSLYFINGILH 540 (549)
Q Consensus 522 p----W~~~-------------~~~~~iyviGG~~~ 540 (549)
| |+.+ +++++||++||...
T Consensus 219 ~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 254 (315)
T 4asc_A 219 ITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFAT 254 (315)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEE
T ss_pred CCCCeEEECCCCCCcccceeEEEECCEEEEECCccc
Confidence 7 9887 78999999999743
No 30
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.37 E-value=2.6e-12 Score=129.21 Aligned_cols=132 Identities=15% Similarity=0.112 Sum_probs=106.7
Q ss_pred cceeeecc-----CceeeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCcc--ccc--c-------cccc-
Q 008916 398 ERAYKYRP-----VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG--FFL--S-------AHCN- 457 (549)
Q Consensus 398 ~~~~~~~~-----~~~v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g--~~~--~-------~~~~- 457 (549)
+.+|+.++ .+.+++|||.+++|.. ||.+|..|++++++|+|| ++||.. ... + ...|
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIY----TSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEE----EECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEE----EECCCCCCCcEeeeEEEEeCCCCceE
Confidence 56777654 4789999999999998 778899999999999999 999974 111 1 1223
Q ss_pred ----ccCCCcceEEEEEeCeec--CC-----c----ceeeeccccceeecC---CcceecCCCce------------EEE
Q 008916 458 ----MDQQSSFHCFGLFLGMQE--KG-----S----VSFAVDYEFAARSKP---TEEFVSKYKGN------------YTF 507 (549)
Q Consensus 458 ----m~~~r~~~~~~~~~g~i~--~g-----~----l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv 507 (549)
|+.+|..|++++++|+++ .| . +. .+ ++||| +|+.+++||.+ ||+
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-~~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v 205 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLN-SC-----EVYDPATETWTELCPMIEARKNHGLVFVKDKIFA 205 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECC-CE-----EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccc-eE-----EEeCCCCCeEEECCCccchhhcceEEEECCEEEE
Confidence 999999999999999993 22 1 33 46 99999 99999999986 999
Q ss_pred EcCccCCC--CceEEc-c----Ccee-------------eeCCeeEEEcCcc
Q 008916 508 TGGKAVGY--RNLFAI-P----WTSF-------------MADDSLYFINGIL 539 (549)
Q Consensus 508 ~GG~~~~~--~~v~~y-p----W~~~-------------~~~~~iyviGG~~ 539 (549)
+||.+... +++++| | |+.+ +++++||++||..
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 257 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQ 257 (306)
T ss_dssp ECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBC
T ss_pred EeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcC
Confidence 99987653 789999 7 9886 7899999999964
No 31
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.35 E-value=2.6e-12 Score=129.98 Aligned_cols=132 Identities=12% Similarity=0.114 Sum_probs=103.8
Q ss_pred cceeeeccCceeeeecCcCCeeee--cc--cccccceeeecCCceeeeeeeecCc-----cc--cc---------ccccc
Q 008916 398 ERAYKYRPVKVVEFERPRQQCVVY--LD--LKREECENLFPSGRVYSQAFHLGGQ-----GF--FL---------SAHCN 457 (549)
Q Consensus 398 ~~~~~~~~~~~v~~~~p~~~~w~~--l~--~~r~~~~~~~~~g~iY~~~~v~GG~-----g~--~~---------~~~~~ 457 (549)
+.++++++ +.+.+|||.+++|.. |+ .+|..|++++++++|| ++||. +. .. ....|
T Consensus 5 ~~l~~~GG-~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 5 DLIFMISE-EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVF----VAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEE----EEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred eEEEEEcC-CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEE----EEcCcccCCCCCccccccceEEecCCCCeE
Confidence 45666666 689999999999976 64 4799999999999999 99995 11 00 11223
Q ss_pred -----ccCCCcceEEEEEeCeec--CC-------cceeeeccccceeecC---CcceecCCCce------------EEEE
Q 008916 458 -----MDQQSSFHCFGLFLGMQE--KG-------SVSFAVDYEFAARSKP---TEEFVSKYKGN------------YTFT 508 (549)
Q Consensus 458 -----m~~~r~~~~~~~~~g~i~--~g-------~l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv~ 508 (549)
|+.+|..|++++++|+++ .| ....+| ++||| +|+.+++||.+ ||++
T Consensus 80 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~-----~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 154 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSV-----MCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVI 154 (315)
T ss_dssp EECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCE-----EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred EECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceE-----EEECCCCCcEeECCCCCCcccceeEEEECCEEEEE
Confidence 999999999999999992 22 222347 99999 89999999987 9999
Q ss_pred cCccCC-C--CceEEc-c----Ccee-------------eeCCeeEEEcCcc
Q 008916 509 GGKAVG-Y--RNLFAI-P----WTSF-------------MADDSLYFINGIL 539 (549)
Q Consensus 509 GG~~~~-~--~~v~~y-p----W~~~-------------~~~~~iyviGG~~ 539 (549)
||.+.+ . +++++| | |+.+ +++++||++||..
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEEC
T ss_pred eCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccC
Confidence 998432 2 789999 7 9886 7899999999964
No 32
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.34 E-value=6.5e-12 Score=125.87 Aligned_cols=132 Identities=18% Similarity=0.136 Sum_probs=106.1
Q ss_pred cceeeecc------CceeeeecCcCCe---eee---cccccccceeeecCCceeeeeeeecCcccc---cc-------cc
Q 008916 398 ERAYKYRP------VKVVEFERPRQQC---VVY---LDLKREECENLFPSGRVYSQAFHLGGQGFF---LS-------AH 455 (549)
Q Consensus 398 ~~~~~~~~------~~~v~~~~p~~~~---w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g~~---~~-------~~ 455 (549)
+.+|+.++ .+.++.||+.++. |.. ||.+|..+++++.+|+|| ++||.... .+ ..
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIY----VSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEE----EECCBCSSCBCCEEEEEETTTT
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEE----EEcccCCCcccceEEEEcCCCC
Confidence 56777654 3679999999999 998 678899999999999999 99997311 11 11
Q ss_pred cc-----ccCCCcceEEEEEeCeec--CC-----cceeeeccccceeecC---CcceecCCCce------------EEEE
Q 008916 456 CN-----MDQQSSFHCFGLFLGMQE--KG-----SVSFAVDYEFAARSKP---TEEFVSKYKGN------------YTFT 508 (549)
Q Consensus 456 ~~-----m~~~r~~~~~~~~~g~i~--~g-----~l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv~ 508 (549)
.| |+.+|..|++++++|+++ .| .+. .| ++||| +|+.+++||.+ ||++
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-~~-----~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~ 212 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILN-SV-----EKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVV 212 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCC-CE-----EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred eEEECCCCCCCcccceEEEECCEEEEECCCCCCcccc-eE-----EEEeCCCCcEEeCCCCCcccccceEEEECCEEEEE
Confidence 23 899999999999999993 22 233 47 99999 99999999987 9999
Q ss_pred cCccCCC--CceEEc-c----Ccee-------------eeCCeeEEEcCcc
Q 008916 509 GGKAVGY--RNLFAI-P----WTSF-------------MADDSLYFINGIL 539 (549)
Q Consensus 509 GG~~~~~--~~v~~y-p----W~~~-------------~~~~~iyviGG~~ 539 (549)
||.+... +++++| | |+.+ +++++||++||..
T Consensus 213 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 263 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYD 263 (301)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred eCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcC
Confidence 9987554 779999 7 8876 8899999999964
No 33
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.30 E-value=1.1e-11 Score=125.50 Aligned_cols=133 Identities=14% Similarity=0.140 Sum_probs=104.6
Q ss_pred ccceeeeccCceeeeecCcCCeeee--cc--cccccceeeecCCceeeeeeeecCcc-----c--ccc---------ccc
Q 008916 397 VERAYKYRPVKVVEFERPRQQCVVY--LD--LKREECENLFPSGRVYSQAFHLGGQG-----F--FLS---------AHC 456 (549)
Q Consensus 397 ~~~~~~~~~~~~v~~~~p~~~~w~~--l~--~~r~~~~~~~~~g~iY~~~~v~GG~g-----~--~~~---------~~~ 456 (549)
.+.+|+.++. .+++|||.+++|.. ++ .+|..|++++.+++|| ++||.. . ... ...
T Consensus 15 ~~~i~~~GG~-~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 89 (318)
T 2woz_A 15 KDLILLVNDT-AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVY----VVGGLYVDEENKDQPLQSYFFQLDNVSSE 89 (318)
T ss_dssp EEEEEEECSS-EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEE----EEESSCC-------CCCBEEEEEETTTTE
T ss_pred cchhhhcccc-ceEEECCCCCceecccCCccCCccceEEEEECCEEE----EECCcccCccccCCCccccEEEEeCCCCc
Confidence 4677887774 58999999999988 43 5788999999999999 999952 1 111 112
Q ss_pred c-----ccCCCcceEEEEEeCeec--C------CcceeeeccccceeecC---CcceecCCCce------------EEEE
Q 008916 457 N-----MDQQSSFHCFGLFLGMQE--K------GSVSFAVDYEFAARSKP---TEEFVSKYKGN------------YTFT 508 (549)
Q Consensus 457 ~-----m~~~r~~~~~~~~~g~i~--~------g~l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv~ 508 (549)
| |+.+|..|++++++|+++ . +.....| ++||| +|+.+++||.+ ||++
T Consensus 90 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 164 (318)
T 2woz_A 90 WVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSV-----LCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCL 164 (318)
T ss_dssp EEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEE-----EEEETTTTEEEEECCCSSCEESCEEEEETTEEEEE
T ss_pred EEECCCCCccccccceEEECCEEEEEcCccCCCCcccceE-----EEEeCCCCCEeECCCCCCcccccEEEEECCEEEEE
Confidence 3 999999999999999992 1 1222357 99999 99999999986 9999
Q ss_pred cCccCCC---CceEEc-c----Ccee-------------eeCCeeEEEcCcc
Q 008916 509 GGKAVGY---RNLFAI-P----WTSF-------------MADDSLYFINGIL 539 (549)
Q Consensus 509 GG~~~~~---~~v~~y-p----W~~~-------------~~~~~iyviGG~~ 539 (549)
||.+.+. +++++| | |+.+ +++++||++||..
T Consensus 165 GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 216 (318)
T 2woz_A 165 GGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVT 216 (318)
T ss_dssp CCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEE
T ss_pred cCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcC
Confidence 9985432 779999 7 9876 7899999999963
No 34
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.30 E-value=4.6e-12 Score=128.33 Aligned_cols=123 Identities=18% Similarity=0.053 Sum_probs=99.6
Q ss_pred eeeecCcCCeeee---cccccccceeeecCCceeeeeeeecCccc---ccc---------cccc-----ccCCCcceEEE
Q 008916 409 VEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQGF---FLS---------AHCN-----MDQQSSFHCFG 468 (549)
Q Consensus 409 v~~~~p~~~~w~~---l~~~r~~~~~~~~~g~iY~~~~v~GG~g~---~~~---------~~~~-----m~~~r~~~~~~ 468 (549)
++.|||.+++|.. ||.+|..|++++++++|| ++||... ... ...| |+.+|..|+++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 155 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIY----VVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVI 155 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEE----EEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEE----EEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEE
Confidence 7889999999998 678899999999999999 9999731 111 1123 89999999999
Q ss_pred EEeCeec--CCc-----ceeeeccccceeecC---CcceecCCCce------------EEEEcCccCCC--CceEEc-c-
Q 008916 469 LFLGMQE--KGS-----VSFAVDYEFAARSKP---TEEFVSKYKGN------------YTFTGGKAVGY--RNLFAI-P- 522 (549)
Q Consensus 469 ~~~g~i~--~g~-----l~~tV~~~~~E~ydp---~W~~v~~l~~~------------iyv~GG~~~~~--~~v~~y-p- 522 (549)
+++|+|+ .|. ....| ++||| +|+.+++||.+ ||++||.+... +++++| |
T Consensus 156 ~~~~~iyv~GG~~~~~~~~~~~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 230 (318)
T 2woz_A 156 SHNGMIYCLGGKTDDKKCTNRV-----FIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLK 230 (318)
T ss_dssp EETTEEEEECCEESSSCBCCCE-----EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETT
T ss_pred EECCEEEEEcCCCCCCCccceE-----EEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECC
Confidence 9999993 221 12247 99999 89999999987 99999987543 678999 7
Q ss_pred ---Ccee-------------eeCCeeEEEcCccc
Q 008916 523 ---WTSF-------------MADDSLYFINGILH 540 (549)
Q Consensus 523 ---W~~~-------------~~~~~iyviGG~~~ 540 (549)
|+.+ +++++||++||...
T Consensus 231 ~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 264 (318)
T 2woz_A 231 TNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAM 264 (318)
T ss_dssp TCCEEECCCCSSCCBSCEEEEETTEEEEECCBCC
T ss_pred CCeEEECCCCCCcccceEEEEECCEEEEECCeec
Confidence 8876 78999999999754
No 35
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.23 E-value=2.3e-12 Score=145.07 Aligned_cols=205 Identities=11% Similarity=-0.024 Sum_probs=135.1
Q ss_pred HHHHhCCChHHHHHHHHHHhhcccCCCCCCHHHHHhhcccCCCC--Ch---hHHHHHHHHHHhhhcCCcccccccccccc
Q 008916 316 WARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFD--HD---VASKLVLEALFFKAEAPHRQRTLAAEESV 390 (549)
Q Consensus 316 Wi~~~~~~~~~R~~~l~~~Ll~~VRf~~ls~~~L~~~~~~~~l~--~~---~~~~ll~ea~~~~~~~~~~~~~~~~~~t~ 390 (549)
|+.++ ...|...+ +.|++.++|++|.+.++......+... ++ .|..+... .... ....+ ....+...
T Consensus 315 ~~~~~---e~~R~~~l-E~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~-~~~~~~~p 386 (695)
T 2zwa_A 315 SADEA---TKKELLKV-EPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEI--NLTV-DEDYQ-LLECECPI 386 (695)
T ss_dssp HSCHH---HHHHHHHH-SCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----C--CCEE-CSSEE-EEECCCTT
T ss_pred hCCHH---HHHHHHhc-cccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccc--cCCC-CCcee-EeccCCCC
Confidence 88886 66677887 889999999999888887766655433 22 22111100 0000 00000 01111121
Q ss_pred cccccc------ccceeeecc-----CceeeeecCcCCeeeec---------ccccccceeeec--CCceeeeeeeecCc
Q 008916 391 TLNRRF------VERAYKYRP-----VKVVEFERPRQQCVVYL---------DLKREECENLFP--SGRVYSQAFHLGGQ 448 (549)
Q Consensus 391 ~~~r~~------~~~~~~~~~-----~~~v~~~~p~~~~w~~l---------~~~r~~~~~~~~--~g~iY~~~~v~GG~ 448 (549)
+ |++ .+.+|+.++ .+.+++|||.+++|..+ |.+|..|+++++ +|+|| ++||.
T Consensus 387 ~--rr~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly----v~GG~ 460 (695)
T 2zwa_A 387 N--RKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL----LIGGR 460 (695)
T ss_dssp C--CBSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE----EECCB
T ss_pred C--CceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEE----EEcCC
Confidence 2 332 256777665 46799999999999874 456889999999 99999 99998
Q ss_pred ccc--ccc---------ccc-----ccCCCcceEEEEE-eCeec--CCcce-eeeccccceeecC---CcceecC---CC
Q 008916 449 GFF--LSA---------HCN-----MDQQSSFHCFGLF-LGMQE--KGSVS-FAVDYEFAARSKP---TEEFVSK---YK 502 (549)
Q Consensus 449 g~~--~~~---------~~~-----m~~~r~~~~~~~~-~g~i~--~g~l~-~tV~~~~~E~ydp---~W~~v~~---l~ 502 (549)
+.. ..+ ..| |+.+|..|+.+++ +|+++ .|.-. ..| ++||| +|+.+++ +|
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v-----~~yd~~t~~W~~~~~~g~~p 535 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAM-----LLYNVTEEIFKDVTPKDEFF 535 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSE-----EEEETTTTEEEECCCSSGGG
T ss_pred CCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCE-----EEEECCCCceEEccCCCCCC
Confidence 421 111 123 9999999999997 99993 22211 147 99999 9999987 55
Q ss_pred ce---------------EEEEcCccCC--C--CceEEc-c----C------cee--------------eeC-CeeEEEcC
Q 008916 503 GN---------------YTFTGGKAVG--Y--RNLFAI-P----W------TSF--------------MAD-DSLYFING 537 (549)
Q Consensus 503 ~~---------------iyv~GG~~~~--~--~~v~~y-p----W------~~~--------------~~~-~~iyviGG 537 (549)
.+ ||++||.... . +++++| | | +.+ +++ ++|||+||
T Consensus 536 ~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG 615 (695)
T 2zwa_A 536 QNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGG 615 (695)
T ss_dssp GSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECC
T ss_pred CcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECC
Confidence 43 8999998532 2 779999 6 6 222 677 99999999
Q ss_pred cc
Q 008916 538 IL 539 (549)
Q Consensus 538 ~~ 539 (549)
..
T Consensus 616 ~~ 617 (695)
T 2zwa_A 616 TS 617 (695)
T ss_dssp BC
T ss_pred cc
Confidence 64
No 36
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.15 E-value=1.1e-10 Score=119.79 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=101.5
Q ss_pred ccceeeecc--CceeeeecCc--CCeeee---cc-cccccceeeecCCceeeeeeeecCccc------ccc---------
Q 008916 397 VERAYKYRP--VKVVEFERPR--QQCVVY---LD-LKREECENLFPSGRVYSQAFHLGGQGF------FLS--------- 453 (549)
Q Consensus 397 ~~~~~~~~~--~~~v~~~~p~--~~~w~~---l~-~~r~~~~~~~~~g~iY~~~~v~GG~g~------~~~--------- 453 (549)
.+.+|+.++ .+.+++||+. +++|.. || .+|..|++++++|+|| ++||.+. ...
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLY----VFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEE----EECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEE----EEcCCCCCCCccceeeccEEEEeCC
Confidence 356788665 3578999997 489998 67 6899999999999999 9999821 111
Q ss_pred cccc-----cc-CCCcceEEEEEeCeec--CCc--------------------------------------ceeeecccc
Q 008916 454 AHCN-----MD-QQSSFHCFGLFLGMQE--KGS--------------------------------------VSFAVDYEF 487 (549)
Q Consensus 454 ~~~~-----m~-~~r~~~~~~~~~g~i~--~g~--------------------------------------l~~tV~~~~ 487 (549)
...| |. .+|..|++++++|+|+ .|. ....|
T Consensus 95 ~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---- 170 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL---- 170 (357)
T ss_dssp TTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEE----
T ss_pred CCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccE----
Confidence 1223 77 9999999999999993 221 11247
Q ss_pred ceeecC---CcceecCCCce-------------EEEEcCccCCC---CceEEc---c----Ccee---------------
Q 008916 488 AARSKP---TEEFVSKYKGN-------------YTFTGGKAVGY---RNLFAI---P----WTSF--------------- 526 (549)
Q Consensus 488 ~E~ydp---~W~~v~~l~~~-------------iyv~GG~~~~~---~~v~~y---p----W~~~--------------- 526 (549)
++||| +|+.+++||.+ ||++||.+... ..+++| | |+.+
T Consensus 171 -~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~ 249 (357)
T 2uvk_A 171 -LSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAG 249 (357)
T ss_dssp -EEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEE
T ss_pred -EEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEE
Confidence 99999 99999999864 99999976432 567776 4 8765
Q ss_pred eeCCeeEEEcCcc
Q 008916 527 MADDSLYFINGIL 539 (549)
Q Consensus 527 ~~~~~iyviGG~~ 539 (549)
+++++|||+||..
T Consensus 250 ~~~~~iyv~GG~~ 262 (357)
T 2uvk_A 250 ISNDSLIFAGGAG 262 (357)
T ss_dssp EETTEEEEECCEE
T ss_pred EECCEEEEEcCcc
Confidence 7899999999963
No 37
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.12 E-value=1e-10 Score=97.59 Aligned_cols=73 Identities=18% Similarity=0.262 Sum_probs=60.3
Q ss_pred EEEEchHHHhcccCHHHHHhhcC--CCCCCCcceEEEecCCCcHHHHHHHhHhHh-----c---Ccee---cCCcchHHH
Q 008916 146 KTLHISSPILAAKSPFFYKLFSN--GMKESEQRHVALRINASEEAALMELLNFMY-----S---NTLS---TTAAPALLD 212 (549)
Q Consensus 146 ~~f~aHr~iLaa~S~yF~~mf~~--~~~Es~~~~I~L~~~~~~~~~f~~lL~fiY-----t---g~l~---i~~~~~v~~ 212 (549)
++|.+||.+ |+.|+||++||.+ ++.|+....|.|+ ++++.+++.+++|+| + ++++ ++. +++.+
T Consensus 12 ~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~--~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~-~~l~e 87 (97)
T 4ajy_C 12 HEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-EIALE 87 (97)
T ss_dssp CEEEEEHHH-HTTSHHHHHHHCCC--------CEEECT--TSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG-GGHHH
T ss_pred cEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECC--CCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH-HHHHH
Confidence 589999999 9999999999987 6788878889998 999999999999999 5 6777 777 79999
Q ss_pred HHHHHhhccc
Q 008916 213 VLMAADKFEV 222 (549)
Q Consensus 213 lL~aA~~l~l 222 (549)
|+.||++|+.
T Consensus 88 Ll~AAnyL~~ 97 (97)
T 4ajy_C 88 LLMAANFLDC 97 (97)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHhhhCC
Confidence 9999999973
No 38
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.06 E-value=5.1e-10 Score=114.86 Aligned_cols=134 Identities=14% Similarity=0.047 Sum_probs=98.4
Q ss_pred cceeeeccC-----------ceeeeecCcCCeeee---cc-cccccceeeecCCceeeeeeeecCcccc-----------
Q 008916 398 ERAYKYRPV-----------KVVEFERPRQQCVVY---LD-LKREECENLFPSGRVYSQAFHLGGQGFF----------- 451 (549)
Q Consensus 398 ~~~~~~~~~-----------~~v~~~~p~~~~w~~---l~-~~r~~~~~~~~~g~iY~~~~v~GG~g~~----------- 451 (549)
..+|+.++. +.+++|||.+++|.. |+ .+|..|++++.+|+|| ++||.+..
T Consensus 66 ~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~~~ 141 (357)
T 2uvk_A 66 GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAY----VTGGVNQNIFNGYFEDLNE 141 (357)
T ss_dssp TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEE----EEECCCHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEE----EEeCcCCCcCcccccchhh
Confidence 567775543 579999999999998 55 7788898888999999 99997311
Q ss_pred --------------------------ccc-------ccc-----ccCCCcc-eEEEEEeCeec--CCc-----ceeeecc
Q 008916 452 --------------------------LSA-------HCN-----MDQQSSF-HCFGLFLGMQE--KGS-----VSFAVDY 485 (549)
Q Consensus 452 --------------------------~~~-------~~~-----m~~~r~~-~~~~~~~g~i~--~g~-----l~~tV~~ 485 (549)
... ..| |+.+|.. +++++++++|+ .|. ....|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v-- 219 (357)
T 2uvk_A 142 AGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAV-- 219 (357)
T ss_dssp HTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCE--
T ss_pred cCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCce--
Confidence 111 123 7776555 99999999983 221 12235
Q ss_pred ccceeec--C---CcceecCCCce--------------EEEEcCccCC-----------------C--CceEEc-c----
Q 008916 486 EFAARSK--P---TEEFVSKYKGN--------------YTFTGGKAVG-----------------Y--RNLFAI-P---- 522 (549)
Q Consensus 486 ~~~E~yd--p---~W~~v~~l~~~--------------iyv~GG~~~~-----------------~--~~v~~y-p---- 522 (549)
++|| | +|+.+++|+.| |||+||.+.. . .++++| |
T Consensus 220 ---~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 220 ---FELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp ---EEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred ---EEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 7785 4 89999998754 9999996421 1 468999 7
Q ss_pred Ccee-------------eeCCeeEEEcCccc
Q 008916 523 WTSF-------------MADDSLYFINGILH 540 (549)
Q Consensus 523 W~~~-------------~~~~~iyviGG~~~ 540 (549)
|+.+ +++++|||+||...
T Consensus 297 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 297 WDKSGELSQGRAYGVSLPWNNSLLIIGGETA 327 (357)
T ss_dssp CEEEEECSSCCBSSEEEEETTEEEEEEEECG
T ss_pred eeeCCCCCCCcccceeEEeCCEEEEEeeeCC
Confidence 9887 78999999999754
No 39
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.88 E-value=1.3e-09 Score=97.30 Aligned_cols=98 Identities=12% Similarity=0.194 Sum_probs=79.8
Q ss_pred EEEEe---EEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCc----------------
Q 008916 141 TVVRV---KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNT---------------- 201 (549)
Q Consensus 141 v~l~~---~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~---------------- 201 (549)
|+|.. ++|.+|+.+ |..|++|++||.+.- ...|.|+ +++..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLP--NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECT--TCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecC--CcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 55554 689999998 889999999997621 4468887 999999999999999765
Q ss_pred ----------eecCCcchHHHHHHHHhhccccchHHHHHHHHHcCCCChhhHHHHH
Q 008916 202 ----------LSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYL 247 (549)
Q Consensus 202 ----------l~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~~~n~~~il 247 (549)
+.++. +++.+|+.||++|++..|.++|++++.. .+...+.-.+.
T Consensus 77 ~~i~~wD~~F~~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeiR 130 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTPEEIR 130 (141)
T ss_dssp ----HHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCHHHHH
T ss_pred hhhhHHHHHHHhCCH-HHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHcCCCHHHHH
Confidence 45566 6999999999999999999999999987 45544444433
No 40
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.87 E-value=4.5e-10 Score=102.52 Aligned_cols=101 Identities=11% Similarity=0.263 Sum_probs=58.8
Q ss_pred eEEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCc-----------------------
Q 008916 145 VKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNT----------------------- 201 (549)
Q Consensus 145 ~~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~----------------------- 201 (549)
++.|.+|+.+ |..|++|++||.+.. ....|.|+ +++..+|+.+++|+|+..
T Consensus 13 g~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~w 86 (160)
T 2p1m_A 13 GESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLP--NVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAW 86 (160)
T ss_dssp -------CHH-HHTCTTTC---------------CCT--TSCHHHHHHHHHC----------------------------
T ss_pred CCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCC--cCcHHHHHHHHHHHHHcccCCCcccccccccccccchhhHH
Confidence 3689999998 789999999998743 23467776 999999999999999876
Q ss_pred ----eecCCcchHHHHHHHHhhccccchHHHHHHHHHcCCC---ChhhHHHHHHhhhhc
Q 008916 202 ----LSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM---TPESALLYLELPSSV 253 (549)
Q Consensus 202 ----l~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l---~~~n~~~il~lA~~~ 253 (549)
+.++. +++.+|+.||++|++..|.++|++++.. .| +++.+..++.++.-+
T Consensus 87 D~~Fl~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f~I~nd~ 143 (160)
T 2p1m_A 87 DADFMKIDQ-ATLFELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTFNIKNDF 143 (160)
T ss_dssp ---------------CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHTTCCCCC
T ss_pred HHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHcCCCCCC
Confidence 34566 6899999999999999999999999988 57 777777776655433
No 41
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.79 E-value=1.6e-08 Score=113.74 Aligned_cols=133 Identities=16% Similarity=-0.006 Sum_probs=96.7
Q ss_pred ccceeeecc-------CceeeeecCcCCeeee---cccccccceeeec-CCceeeeeeeecCcccc-------cccccc-
Q 008916 397 VERAYKYRP-------VKVVEFERPRQQCVVY---LDLKREECENLFP-SGRVYSQAFHLGGQGFF-------LSAHCN- 457 (549)
Q Consensus 397 ~~~~~~~~~-------~~~v~~~~p~~~~w~~---l~~~r~~~~~~~~-~g~iY~~~~v~GG~g~~-------~~~~~~- 457 (549)
.+.+|+.++ .+.+++||+.+++|.. ||.+|..|+++++ +|+|| ++||.+.. .....|
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iy----v~GG~~~~~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVL----ILGGVTEGPAMLLYNVTEEIFK 526 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEE----EECCBCSSCSEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEE----EECCCCCCCCEEEEECCCCceE
Confidence 455777544 4679999999999998 7788999999986 99999 99998321 112223
Q ss_pred -------ccCCCcceEEEEEe---Ceec--CC------cceeeeccccceeecC---C------cceecCCC-ce-----
Q 008916 458 -------MDQQSSFHCFGLFL---GMQE--KG------SVSFAVDYEFAARSKP---T------EEFVSKYK-GN----- 504 (549)
Q Consensus 458 -------m~~~r~~~~~~~~~---g~i~--~g------~l~~tV~~~~~E~ydp---~------W~~v~~l~-~~----- 504 (549)
|+.+|..|+.++++ |+|+ .| .....| ++||| + |+.++++| .+
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v-----~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~ 601 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA-----IIFKYDAENATEPITVIKKLQHPLFQRYGSQ 601 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE-----EEEEECTTCSSCCEEEEEEEECGGGCCBSCE
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE-----EEEEccCCccccceEEEEcCCCCCCCcccce
Confidence 78899999988888 7772 22 122347 99999 6 88887764 22
Q ss_pred --------EEEEcCccCC-----CCceEEc-c----Ccee--------------------eeCC-eeEEEcCc
Q 008916 505 --------YTFTGGKAVG-----YRNLFAI-P----WTSF--------------------MADD-SLYFINGI 538 (549)
Q Consensus 505 --------iyv~GG~~~~-----~~~v~~y-p----W~~~--------------------~~~~-~iyviGG~ 538 (549)
|||+||.+.. .+++++| | |+.+ ++++ +|||+||-
T Consensus 602 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 602 IKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred EEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 9999997643 2779999 7 8643 3344 99999994
No 42
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.63 E-value=4.7e-08 Score=109.03 Aligned_cols=124 Identities=13% Similarity=-0.007 Sum_probs=88.8
Q ss_pred ceeeeecCcCCeeee---cccccccce---eeecCCceeeeeeeecCccc------ccccccc-----ccCCCcceEEEE
Q 008916 407 KVVEFERPRQQCVVY---LDLKREECE---NLFPSGRVYSQAFHLGGQGF------FLSAHCN-----MDQQSSFHCFGL 469 (549)
Q Consensus 407 ~~v~~~~p~~~~w~~---l~~~r~~~~---~~~~~g~iY~~~~v~GG~g~------~~~~~~~-----m~~~r~~~~~~~ 469 (549)
..+.+|||.+++|.. |+.+|..++ ++..+|+|| ++||... ......| |+.+|+.|++++
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~ly----v~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~ 294 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIV----VTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT 294 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEE----EECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEE----EeCCCCCCceEEecCcCCceeECCCCCccccccceEE
Confidence 468899999999998 455566543 335799999 9999732 1112224 999999999999
Q ss_pred E-eCeec--CCc-----ceeeeccccceeecC---Cccee-----cCCCce-----------EEEEcCccCC------CC
Q 008916 470 F-LGMQE--KGS-----VSFAVDYEFAARSKP---TEEFV-----SKYKGN-----------YTFTGGKAVG------YR 516 (549)
Q Consensus 470 ~-~g~i~--~g~-----l~~tV~~~~~E~ydp---~W~~v-----~~l~~~-----------iyv~GG~~~~------~~ 516 (549)
+ +|+++ .|. ...++ |+||| +|+.+ .||+.+ +|++||.++. .+
T Consensus 295 ~~dg~iyv~GG~~~~~~~~~~~-----e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~ 369 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGGVFEKNG-----EVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPST 369 (656)
T ss_dssp CTTSCEEEECCCCCSSSCCCCE-----EEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred ecCCeEEEEeCcccCCcccccc-----eEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCcc
Confidence 9 99993 231 12347 99999 99997 455543 8999987743 26
Q ss_pred ceEEc-c----Ccee-------------------e----eCCeeEEEcCcc
Q 008916 517 NLFAI-P----WTSF-------------------M----ADDSLYFINGIL 539 (549)
Q Consensus 517 ~v~~y-p----W~~~-------------------~----~~~~iyviGG~~ 539 (549)
.+++| | |... + .+++||++||..
T Consensus 370 ~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 370 AMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp EEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBS
T ss_pred ceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCC
Confidence 78888 7 4321 1 489999999953
No 43
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.53 E-value=6.5e-08 Score=107.91 Aligned_cols=123 Identities=15% Similarity=0.083 Sum_probs=89.4
Q ss_pred eeeeecCcCCeeee-cccccccceeeec--CCceeeeeeeecCcccc---------ccccc-------c-----ccCCCc
Q 008916 408 VVEFERPRQQCVVY-LDLKREECENLFP--SGRVYSQAFHLGGQGFF---------LSAHC-------N-----MDQQSS 463 (549)
Q Consensus 408 ~v~~~~p~~~~w~~-l~~~r~~~~~~~~--~g~iY~~~~v~GG~g~~---------~~~~~-------~-----m~~~r~ 463 (549)
.++.|||..++|.. .+.++..++++++ +|+|| ++||.... ....+ | |+.+|.
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~l~----v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~ 242 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVL----MWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD 242 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEE----EEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC
T ss_pred ccccCCCCCCeeeeeccCCCCceeEEEEecCCEEE----EEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC
Confidence 57889999999998 4456666776666 99999 99986210 01111 2 777787
Q ss_pred ceE--EEE-EeCeec--CCcceeeeccccceeecC---CcceecCCCce-------------EEEEcCc-cCCC--CceE
Q 008916 464 FHC--FGL-FLGMQE--KGSVSFAVDYEFAARSKP---TEEFVSKYKGN-------------YTFTGGK-AVGY--RNLF 519 (549)
Q Consensus 464 ~~~--~~~-~~g~i~--~g~l~~tV~~~~~E~ydp---~W~~v~~l~~~-------------iyv~GG~-~~~~--~~v~ 519 (549)
.|| .++ .+|+|+ .|....+| ++||| +|+.+++|+.+ |||+||. +++. ++++
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v-----~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKT-----SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCE-----EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred CccccccCCCCCCEEEeCCCCCCce-----EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccce
Confidence 775 333 578883 33222247 99999 89999999976 9999994 4433 7899
Q ss_pred Ec-c----Ccee-----------------eeCCeeEEEcCcc
Q 008916 520 AI-P----WTSF-----------------MADDSLYFINGIL 539 (549)
Q Consensus 520 ~y-p----W~~~-----------------~~~~~iyviGG~~ 539 (549)
+| | |+.+ ..+++||++||..
T Consensus 318 ~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~ 359 (656)
T 1k3i_A 318 VYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKK 359 (656)
T ss_dssp EEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGG
T ss_pred EeCCCCCcceeCCCccccccccccccceeecCCceEEEECCC
Confidence 99 7 9874 2789999999864
No 44
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.21 E-value=2.3e-06 Score=71.19 Aligned_cols=77 Identities=18% Similarity=0.295 Sum_probs=63.4
Q ss_pred EEEEe---EEEEchHHHhcccCHHHHHhhcCCCCCCCcceEEEecCCCcHHHHHHHhHhHhcCc--------------ee
Q 008916 141 TVVRV---KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNT--------------LS 203 (549)
Q Consensus 141 v~l~~---~~f~aHr~iLaa~S~yF~~mf~~~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~--------------l~ 203 (549)
|+|.. +.|.+++.+ |..|.+++.||.+++ |.....|.|+ +++..+++.+++|+|..+ ..
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp--~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELK--QFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEET--TSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecC--CcCHHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 45554 699999997 789999999999876 6556789998 999999999999998643 13
Q ss_pred cCCcchHHHHHHHHhhccc
Q 008916 204 TTAAPALLDVLMAADKFEV 222 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l 222 (549)
++. +.+.+|+.||++|++
T Consensus 82 vd~-~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPT-EMSLELLLAADYLSI 99 (99)
T ss_dssp CCH-HHHHHHHHHHHHHCC
T ss_pred CCH-HHHHHHHHHHHHhCc
Confidence 444 689999999999975
No 45
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.14 E-value=2.9e-06 Score=70.25 Aligned_cols=73 Identities=19% Similarity=0.267 Sum_probs=57.0
Q ss_pred EEEEchHHHhcccCHHHHHhhcC-CC-CCCCcceEEEecCCCcHHHHHHHhHhHhcCc-----------eecCCcchHHH
Q 008916 146 KTLHISSPILAAKSPFFYKLFSN-GM-KESEQRHVALRINASEEAALMELLNFMYSNT-----------LSTTAAPALLD 212 (549)
Q Consensus 146 ~~f~aHr~iLaa~S~yF~~mf~~-~~-~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~-----------l~i~~~~~v~~ 212 (549)
++|.+++.+ |..|.+++.||.+ +. .|+....|.|+ +++..+++.+++|+|... ..++. +.+.+
T Consensus 11 ~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~-~~l~e 86 (96)
T 2fnj_C 11 HEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-EIALE 86 (96)
T ss_dssp CEEEEEHHH-HTTSHHHHHHHHCC--------CEEECS--SCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT-TTHHH
T ss_pred CEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCC--CCCHHHHHHHHHHHHHccccCCCcccCCCcccCH-HHHHH
Confidence 589999997 7899999999986 33 56666788888 999999999999998643 23555 69999
Q ss_pred HHHHHhhccc
Q 008916 213 VLMAADKFEV 222 (549)
Q Consensus 213 lL~aA~~l~l 222 (549)
|+.||++|++
T Consensus 87 Li~AAnyLdI 96 (96)
T 2fnj_C 87 LLMAANFLDC 96 (96)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHhCc
Confidence 9999999975
No 46
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.11 E-value=7.1e-06 Score=75.19 Aligned_cols=106 Identities=11% Similarity=0.258 Sum_probs=77.0
Q ss_pred eEEEEe---EEEEchHHHhcccCHHHHHhhcCCCC----CCCcceEEEecCCCcHHHHHHHhHhHhcCc-----------
Q 008916 140 STVVRV---KTLHISSPILAAKSPFFYKLFSNGMK----ESEQRHVALRINASEEAALMELLNFMYSNT----------- 201 (549)
Q Consensus 140 dv~l~~---~~f~aHr~iLaa~S~yF~~mf~~~~~----Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~----------- 201 (549)
.|+|.. +.|.+++.+ |..|.+++.|+...-. +.....|.|+ +++..+|+.|++|++...
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~Iplp--nV~s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVP--NVRSSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECT--TCCHHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeC--CCCHHHHHHHHHHHHHcccCCCccccccc
Confidence 456655 589999998 6789999999975322 1223678887 999999999999997533
Q ss_pred --------------eecCCcchHHHHHHHHhhccccchHHHHHHHHHcC--CCChhhHHHHHHh
Q 008916 202 --------------LSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNM--PMTPESALLYLEL 249 (549)
Q Consensus 202 --------------l~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l--~l~~~n~~~il~l 249 (549)
+.++. +.+.+|+.||++|+|..|.++|++.+..| .-+++..-.++.+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~-~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I 147 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQ-EMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNI 147 (169)
T ss_dssp ---CCCCCHHHHHHTCSCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTC
T ss_pred ccccccccHHHHHHHcCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 12333 67899999999999999999999998542 3455544444443
No 47
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.03 E-value=1.8e-05 Score=66.73 Aligned_cols=93 Identities=16% Similarity=0.246 Sum_probs=73.9
Q ss_pred eEEEEe--EEEEchHHHhcccC-HHHHHhhcCCCC----CCCcceEEEecCCCcHHHHHHHhHhHhcCceecCCcchHHH
Q 008916 140 STVVRV--KTLHISSPILAAKS-PFFYKLFSNGMK----ESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLD 212 (549)
Q Consensus 140 dv~l~~--~~f~aHr~iLaa~S-~yF~~mf~~~~~----Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~ 212 (549)
-|+|.| ..|...+..|+... .+|.+||.+... ....+.+-+ |-++..|+.||+|+.+|++.++..-....
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi---DRdp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI---DRDPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE---CSCHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe---cCChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 344554 68999999998875 478999876421 113356666 68999999999999999998765335688
Q ss_pred HHHHHhhccccchHHHHHHHHHc
Q 008916 213 VLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 213 lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
++.-|.+|+|+.|++.|.+.|.+
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhc
Confidence 99999999999999999998764
No 48
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.51 E-value=9.1e-05 Score=62.88 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=58.8
Q ss_pred eEEEEe---EEEEchHHHhcccCHHHHHhhcC--CCCCCCcceEEEecCCCcHHHHHHHhHhHhcCc-----------ee
Q 008916 140 STVVRV---KTLHISSPILAAKSPFFYKLFSN--GMKESEQRHVALRINASEEAALMELLNFMYSNT-----------LS 203 (549)
Q Consensus 140 dv~l~~---~~f~aHr~iLaa~S~yF~~mf~~--~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~-----------l~ 203 (549)
.|+|.. .+|.+++.+ |..|..++.|+.. .+.|+....|.|+ +++..+|+.+++|++... ..
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~Iplp--nV~s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECS--SCCHHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCC--CCCHHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 456654 589999995 6789999999985 2345555678887 999999999999997533 13
Q ss_pred cCCcchHHHHHHHHhhccc
Q 008916 204 TTAAPALLDVLMAADKFEV 222 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l 222 (549)
++. +.+.+|+.||++|++
T Consensus 95 vd~-~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAP-EIALELLMAANFLDC 112 (112)
T ss_dssp CCH-HHHHHHHHHHHHHTC
T ss_pred cCH-HHHHHHHHHHHHhCc
Confidence 444 689999999999975
No 49
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.78 E-value=0.002 Score=59.96 Aligned_cols=93 Identities=16% Similarity=0.246 Sum_probs=73.0
Q ss_pred eEEEEe--EEEEchHHHhcccC-HHHHHhhcCCCC----CCCcceEEEecCCCcHHHHHHHhHhHhcCceecCCcchHHH
Q 008916 140 STVVRV--KTLHISSPILAAKS-PFFYKLFSNGMK----ESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLD 212 (549)
Q Consensus 140 dv~l~~--~~f~aHr~iLaa~S-~yF~~mf~~~~~----Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~ 212 (549)
-|+|.| ..|...+..|.... .+|.+||.+... ....+.+-+ |-++..|+.||+|+-+|++.++..-....
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI---DRDP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI---DRDPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE---CSCSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe---cCChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 345555 68999999998765 378899876421 112356666 67999999999999999998866445678
Q ss_pred HHHHHhhccccchHHHHHHHHHc
Q 008916 213 VLMAADKFEVASCMRYCSRLLRN 235 (549)
Q Consensus 213 lL~aA~~l~l~~L~~~C~~~L~~ 235 (549)
++.-|.+|+|+.|.+.|.+.|.+
T Consensus 90 l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 90 VLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcHHHHHHHHHHHHH
Confidence 99999999999999999998865
No 50
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.93 E-value=0.017 Score=48.91 Aligned_cols=93 Identities=9% Similarity=0.042 Sum_probs=66.0
Q ss_pred eEEEEe--EEEEchHHHhcccCH-HHHHhhcCCC-CCCCcceEEEecCCCcHHHHHHHhHhHhcCceecCCcchHHHHHH
Q 008916 140 STVVRV--KTLHISSPILAAKSP-FFYKLFSNGM-KESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLM 215 (549)
Q Consensus 140 dv~l~~--~~f~aHr~iLaa~S~-yF~~mf~~~~-~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~ 215 (549)
-|+|.| ..|...+..|..... .+.+||.+.. .....+.+-+ |-++..|+.||+|+.+|++.++..-.+..++.
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~ 82 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF---DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEE 82 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE---CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE---ecChHHHHHHHHHhcCCCCCCCCcccHHHHHH
Confidence 345555 689999999987643 4555665421 1123456776 67899999999999999998776446789999
Q ss_pred HHhhccccchHH--HHHHHHHc
Q 008916 216 AADKFEVASCMR--YCSRLLRN 235 (549)
Q Consensus 216 aA~~l~l~~L~~--~C~~~L~~ 235 (549)
-|.+|+|+...- .|...+.+
T Consensus 83 Ea~fy~i~~~~l~~CC~~~~~~ 104 (115)
T 3kvt_A 83 ELEFWGLDSNQVEPCCWMTYTA 104 (115)
T ss_dssp HHHHHTCCGGGBCGGGSHHHHS
T ss_pred HHHHhCCChHHHHHHHHHHHHh
Confidence 999999998652 34444444
No 51
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=94.20 E-value=0.077 Score=45.52 Aligned_cols=88 Identities=10% Similarity=0.117 Sum_probs=61.7
Q ss_pred eEEEEe--EEEEchHHHhcccCHHHHHhhcCC----CCCCCcceEEEecCCCcHHHHHHHhHhHhcCceecCCcchHHHH
Q 008916 140 STVVRV--KTLHISSPILAAKSPFFYKLFSNG----MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDV 213 (549)
Q Consensus 140 dv~l~~--~~f~aHr~iLaa~S~yF~~mf~~~----~~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~l 213 (549)
-|+|.| ..|...+..|..... .||... ......+.+-+ |=++..|+.||+|+-+|++.+.....+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 455555 689999999976532 233321 11123456766 679999999999999999987653468899
Q ss_pred HHHHhhccccchH-HH-HHHHH
Q 008916 214 LMAADKFEVASCM-RY-CSRLL 233 (549)
Q Consensus 214 L~aA~~l~l~~L~-~~-C~~~L 233 (549)
+.-|++|+|+.+. +. |.+-+
T Consensus 88 ~~Ea~fy~i~~l~l~~cC~~~~ 109 (124)
T 1s1g_A 88 DDELAFYGILPEIIGDCCYEEY 109 (124)
T ss_dssp HHHHHHTTCCGGGBCHHHHHHH
T ss_pred HHHHHHcCCChHHHHHHHHHHH
Confidence 9999999999873 44 44443
No 52
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=93.32 E-value=0.043 Score=45.68 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=56.9
Q ss_pred EEEEe--EEEEchHHHhcccCHHHHHhhcCCCC----CCCcceEEEecCCCcHHHHHHHhHhHhcCceecCCcchHHHHH
Q 008916 141 TVVRV--KTLHISSPILAAKSPFFYKLFSNGMK----ESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVL 214 (549)
Q Consensus 141 v~l~~--~~f~aHr~iLaa~S~yF~~mf~~~~~----Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL 214 (549)
|+|.| ..|...+..|..... .||...-+ ....+.+-+ |=++..|+.||+|+-+|++.+.....+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi---DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF---DRDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE---CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE---eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 34444 689999988876532 23333100 112356666 6699999999999999999876534688999
Q ss_pred HHHhhccccchH
Q 008916 215 MAADKFEVASCM 226 (549)
Q Consensus 215 ~aA~~l~l~~L~ 226 (549)
.-|++|+|+.+.
T Consensus 76 ~Ea~fy~i~~l~ 87 (105)
T 1nn7_A 76 EELAFFGLIPEI 87 (105)
T ss_dssp HHHHHHTCCSCC
T ss_pred HHHHHcCCCHHH
Confidence 999999999863
No 53
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=93.06 E-value=0.1 Score=45.68 Aligned_cols=82 Identities=11% Similarity=0.094 Sum_probs=59.5
Q ss_pred ceeEEEEe--EEEEchHHHhcccCHHHHHhhcCCC----CCCCcceEEEecCCCcHHHHHHHhHhHhcCceecCCcchHH
Q 008916 138 DCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGM----KESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALL 211 (549)
Q Consensus 138 ~~dv~l~~--~~f~aHr~iLaa~S~yF~~mf~~~~----~Es~~~~I~L~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~ 211 (549)
.--|+|.| ..|...+..|..... .||...- .....+.+-+ |=++..|+.||+|+-+|++.+.....+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 34455555 689999999976432 2343310 1123456776 6799999999999999999876534689
Q ss_pred HHHHHHhhccccch
Q 008916 212 DVLMAADKFEVASC 225 (549)
Q Consensus 212 ~lL~aA~~l~l~~L 225 (549)
.++.-|++|+|+.+
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 99999999999997
No 54
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=91.30 E-value=0.15 Score=41.93 Aligned_cols=83 Identities=11% Similarity=0.062 Sum_probs=57.4
Q ss_pred EEEEe--EEEEchHHHhcccCH-HHHHhhcC-CCCCCCcceEEEecCCCcHHHHHHHhHhHhc-CceecCCcchHHHHHH
Q 008916 141 TVVRV--KTLHISSPILAAKSP-FFYKLFSN-GMKESEQRHVALRINASEEAALMELLNFMYS-NTLSTTAAPALLDVLM 215 (549)
Q Consensus 141 v~l~~--~~f~aHr~iLaa~S~-yF~~mf~~-~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYt-g~l~i~~~~~v~~lL~ 215 (549)
|+|.| ..|...+..|...-. .+.+|+.. .......+++-+ |=++..|+.||+|+-+ |++.+.....+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi---DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF---DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE---CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE---cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 34444 689999988865421 22233321 011123456777 6789999999999999 8998765446789999
Q ss_pred HHhhccccchH
Q 008916 216 AADKFEVASCM 226 (549)
Q Consensus 216 aA~~l~l~~L~ 226 (549)
-|.+|+|+.+.
T Consensus 80 Ea~fy~i~~~~ 90 (100)
T 1t1d_A 80 EIKFYELGENA 90 (100)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCCHHH
Confidence 99999998854
No 55
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.93 E-value=3 Score=34.13 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=30.7
Q ss_pred eecCCcchHHHHHHHHhhccccchHHHHHHHHHcCCC
Q 008916 202 LSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM 238 (549)
Q Consensus 202 l~i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l 238 (549)
-.++. +|...++.+|+.|+++.|.+.|.+|+.+ +.
T Consensus 6 ~~L~~-~NCl~i~~~A~~~~~~~L~~~a~~fi~~-nF 40 (105)
T 2eqx_A 6 SGVQV-GNCLQVMWLADRHSDPELYTAAKHCAKT-HL 40 (105)
T ss_dssp CCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred ccCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH-HH
Confidence 34566 7999999999999999999999999987 44
No 56
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=67.57 E-value=18 Score=34.69 Aligned_cols=94 Identities=6% Similarity=0.066 Sum_probs=64.4
Q ss_pred cCCcchHHHHHHHHhhccccchHHHHHHHHHcCCC------------ChhhHHHHHHhhhhcccccChHHHHHHHHHHHH
Q 008916 204 TTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM------------TPESALLYLELPSSVLMGEAVQPLTDAARQYLA 271 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l------------~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~ 271 (549)
++. +|+..++..|+.|+++.|.+.|.+|+.+ +. +.+....++.--.. ...+-..+.+++.+|+.
T Consensus 139 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~-~f~~v~~~~~f~~L~~~~l~~lL~~d~L--~v~sE~~vf~av~~W~~ 214 (279)
T 3i3n_A 139 LHL-SNCVAIHSLAHMYTLSQLALKAADMIRR-NFHKVIQDEEFYTLPFHLIRDWLSDLEI--TVDSEEVLFETVLKWVQ 214 (279)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-THHHHTTSSGGGGSCHHHHHHHHTCSSC--CCSCHHHHHHHHHHHHH
T ss_pred CCc-chHHHHHHHHHHcCcHHHHHHHHHHHHH-HHHHHhcCcChhcCCHHHHHHHhcCcCC--CCCCHHHHHHHHHHHHH
Confidence 556 6999999999999999999999999876 32 33333344331111 11124578889999987
Q ss_pred hh-------hhhhhccchhhcCCCHHHHhcccccCccc
Q 008916 272 SR-------YKDMTKFQDEVMALPLAGVEAILSSDDLQ 302 (549)
Q Consensus 272 ~n-------f~~v~~~s~~fl~L~~~~l~~LL~sd~L~ 302 (549)
.+ +.++.. .=-|..|+.+.|..++..+.+-
T Consensus 215 ~~~~~r~~~~~~ll~-~VRf~l~~~~~L~~~v~~~~l~ 251 (279)
T 3i3n_A 215 RNAEERERYFEELFK-LLRLSQMKPTYLTRHVKPERLV 251 (279)
T ss_dssp TTHHHHTTTHHHHHT-TSCGGGSCHHHHHHTTTTSHHH
T ss_pred cCHHHHHHHHHHHHH-hcCCCCCCHHHHHHHhhccchh
Confidence 54 344555 4567778888888888776653
No 57
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=66.92 E-value=4.7 Score=32.60 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=30.8
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhh
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRY 274 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf 274 (549)
.++.+|+..++.+|+.| +++.|++.|.+|+.+++
T Consensus 76 ~~~~~~~~~ll~~A~~~----~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKY----IVPALAKACVNFLETSL 109 (109)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHhhC
Confidence 57889999999999999 89999999999998763
No 58
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=55.62 E-value=7.9 Score=34.02 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=29.7
Q ss_pred cCCcchHHHHHHHHhhccccchHHHHHHHHHcCCCC
Q 008916 204 TTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMT 239 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~ 239 (549)
++. +|+..++..|+.|+++.|++.|.+|+.+ ++.
T Consensus 132 l~~-~n~~~~~~~A~~~~~~~L~~~~~~~i~~-~~~ 165 (172)
T 3htm_A 132 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HAT 165 (172)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC-
T ss_pred CCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-HHH
Confidence 455 6999999999999999999999999988 553
No 59
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=48.65 E-value=14 Score=30.78 Aligned_cols=33 Identities=6% Similarity=0.259 Sum_probs=29.9
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhh
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 273 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~n 273 (549)
.++.+|+..++.+|..+ .++.|++.|.+||.++
T Consensus 94 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYL----QMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHhc
Confidence 57889999999999999 8999999999999764
No 60
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=47.13 E-value=18 Score=38.34 Aligned_cols=81 Identities=11% Similarity=0.100 Sum_probs=57.1
Q ss_pred eEEEEe--EEEEchHHHhcccCHHHHHhhcC-----CCCCCCcceEEEecCCCcHHHHHHHhHhHhc-CceecCCcchHH
Q 008916 140 STVVRV--KTLHISSPILAAKSPFFYKLFSN-----GMKESEQRHVALRINASEEAALMELLNFMYS-NTLSTTAAPALL 211 (549)
Q Consensus 140 dv~l~~--~~f~aHr~iLaa~S~yF~~mf~~-----~~~Es~~~~I~L~~~~~~~~~f~~lL~fiYt-g~l~i~~~~~v~ 211 (549)
-|++.| ..|...+..|..... .+|.. .......+++-+ |=++..|+.+|+|+.+ |++.....-.+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~---s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~ 126 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPE---TLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLD 126 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---STTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCC---CcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHH
Confidence 455555 689999998865422 22221 011123456777 6799999999999999 999876634577
Q ss_pred HHHHHHhhccccchH
Q 008916 212 DVLMAADKFEVASCM 226 (549)
Q Consensus 212 ~lL~aA~~l~l~~L~ 226 (549)
.+++-|++|+++++.
T Consensus 127 ~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 127 IFSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHHTTCCHHH
T ss_pred HHHHHHHhcCCCHHH
Confidence 889999999998865
No 61
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=45.39 E-value=7.2 Score=33.22 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=31.5
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhhh
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYK 275 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf~ 275 (549)
.++.+|+..++..|..+ +++.|++.|.+||..++.
T Consensus 100 ~i~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFL----SVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCCTTTHHHHHHHHHHH----TCGGGHHHHHHHTTCCCS
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhcc
Confidence 57889999999999999 889999999999987754
No 62
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=44.96 E-value=8.3 Score=32.76 Aligned_cols=38 Identities=8% Similarity=0.052 Sum_probs=29.1
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhhhhhh
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMT 278 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf~~v~ 278 (549)
.++.+|+..++..|+.+ .++.|++.|.+|+.+++..-.
T Consensus 86 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKEL----RVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCCC-------
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHhccCCC
Confidence 57889999999999999 899999999999988876543
No 63
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=43.84 E-value=14 Score=36.03 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=29.6
Q ss_pred cCCcchHHHHHHHHhhccccchHHHHHHHHHcCCCC
Q 008916 204 TTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMT 239 (549)
Q Consensus 204 i~~~~~v~~lL~aA~~l~l~~L~~~C~~~L~~l~l~ 239 (549)
++. +++..+|.+|+.|+++.|++.|.+|+.. ++.
T Consensus 272 ~~~-~n~~~~l~~A~~~~~~~L~~~~~~~i~~-~~~ 305 (312)
T 3hqi_A 272 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HAT 305 (312)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC-
T ss_pred CCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHH
Confidence 355 6999999999999999999999999988 553
No 64
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=40.45 E-value=19 Score=29.31 Aligned_cols=31 Identities=3% Similarity=0.006 Sum_probs=28.4
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHH
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 271 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~ 271 (549)
.++.+|+..++..|..+ +++.|++.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYL----KVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999999 89999999999985
No 65
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=40.30 E-value=21 Score=29.37 Aligned_cols=31 Identities=16% Similarity=0.241 Sum_probs=28.3
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHH
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 271 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~ 271 (549)
.++.+|+..++..|+.+ .++.|++.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l----~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFL----QMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999999 89999999999985
No 66
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=39.72 E-value=27 Score=28.67 Aligned_cols=33 Identities=12% Similarity=0.061 Sum_probs=29.6
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhh
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 273 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~n 273 (549)
.++.+|+..++..|+.+ +++.|++.|.+|+.+.
T Consensus 88 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEIL----EIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCGGGHHHHHHHHHHH----TCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHh
Confidence 57889999999999999 8999999999998753
No 67
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=38.69 E-value=14 Score=30.49 Aligned_cols=33 Identities=9% Similarity=0.090 Sum_probs=27.8
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhh
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 273 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~n 273 (549)
.++.+|+..++..|+.+ +++.|++.|.+|+.++
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGNRDQVLLAAREL----RVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHc
Confidence 57889999999999999 8999999999998764
No 68
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=36.68 E-value=24 Score=33.28 Aligned_cols=93 Identities=9% Similarity=0.129 Sum_probs=58.9
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhhhhhhccchhhcCCCHHHHhcccccCccccCChHHHHHHHHHH
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKW 316 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~s~~fl~L~~~~l~~LL~sd~L~v~sE~~V~~av~~W 316 (549)
.++.+|+..++..|..+ .++.|.+.|.+|+..++..- + .-.+..+ .. . .+-.++.+.+..+
T Consensus 98 ~i~~~~v~~ll~~A~~l----~i~~l~~~c~~~L~~~l~~~-n-~~~i~~~-----A~-----~---~~~~~L~~~~~~~ 158 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLL----LLTDLKTLCCEFLEGCIAAE-N-CIGIRDF-----AL-----H---YCLHHVHYLATEY 158 (256)
T ss_dssp CCC-CCHHHHHHHHHHH----TCHHHHHHHHHHHHHTCCSS-T-THHHHHH-----HH-----H---TTCHHHHHHHHHH
T ss_pred cccHhHHHHHHHHHHHH----ChHHHHHHHHHHHHhhCCHh-h-HHHHHHH-----HH-----H---cCcHHHHHHHHHH
Confidence 57889999999999999 89999999999998764321 1 1111110 00 0 1234566677777
Q ss_pred HHHhCCChHHHHHHHHHHhhcccCCCCCCHHHHHhhcccCCCC
Q 008916 317 ARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFD 359 (549)
Q Consensus 317 i~~~~~~~~~R~~~l~~~Ll~~VRf~~ls~~~L~~~~~~~~l~ 359 (549)
+..+ + ..+...=-|..|+.+.|.++++.+.+.
T Consensus 159 i~~~----------f-~~v~~~~~f~~L~~~~l~~lL~~d~L~ 190 (256)
T 3hve_A 159 LETH----------F-RDVSSTEEFLELSPQKLKEVISLEKLN 190 (256)
T ss_dssp HHHH----------H-HHHTTCHHHHSSCHHHHHHHHHCC---
T ss_pred HHHH----------H-HHHhCCcchhcCCHHHHHHHHccCCCC
Confidence 7654 2 345544456778899998888776653
No 69
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=34.86 E-value=33 Score=27.92 Aligned_cols=30 Identities=7% Similarity=0.111 Sum_probs=27.5
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHH
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYL 270 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi 270 (549)
.++.+|+..++..|..+ +++.|++.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~----~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLL----EIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHh
Confidence 57889999999999999 8999999999987
No 70
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=24.25 E-value=30 Score=29.54 Aligned_cols=30 Identities=7% Similarity=0.150 Sum_probs=27.1
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHH
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYL 270 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi 270 (549)
.++.+|+..++.+|..+ .++.|++.|.+||
T Consensus 114 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADLL----LLTDLKTLCCEFL 143 (144)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHh
Confidence 57889999999999999 8999999998876
No 71
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=21.71 E-value=37 Score=28.51 Aligned_cols=34 Identities=21% Similarity=0.123 Sum_probs=26.3
Q ss_pred CCChhhHHHHHHhhhhcccccChHHHHHHHHHHHHhhh
Q 008916 237 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRY 274 (549)
Q Consensus 237 ~l~~~n~~~il~lA~~~~~a~~~~~L~~~~~~fi~~nf 274 (549)
.++.+++..++.+|..| .++.|++.|.+|+.+++
T Consensus 90 ~~~~~~~~~ll~~A~~~----~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 90 PNLDKMADDLLAAADKY----ALERLKVMCEDALCSNL 123 (145)
T ss_dssp TTGGGTHHHHHHHHHHT----TCHHHHHHHHCC-----
T ss_pred CCcHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhC
Confidence 46788999999999999 89999999999987654
Done!